Phyre 2 alignment of P76063 with c1s7eA_

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Job Description | P76063
Confidence | 63.62% | Date | Thu Jan 5 12:18:02 GMT 2012
Rank | 132 | Aligned Residues | 25
% Identity | 16% | Template | c1s7eA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:hepatocyte nuclear factor 6; | PDBTitle: solution structure of hnf-6
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 17 | . | . | 20 | . | . | . | . |  | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | Q | S | A | M | A | R | L | . | L | G | V | S | P | P | S | V | N | Q | W | I | K | G | V | R | Q
Query Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | Q | A | I | F | A | Q | R | V | L | C | R | S | Q | G | T | L | S | D | L | L | R | N | P | K | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | S | S | S |  | S | S |  |  |  |  |  | T | T | S |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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