BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (268 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P18021 Resolvase n=83 Tax=root RepID=REDM_ECOLX 469 e-131 UniRef50_D1S150 DNA integration/recombination/invertion protein ... 247 3e-64 UniRef50_Q6TFY0 ResD n=8 Tax=Enterobacteriaceae RepID=Q6TFY0_ERWAM 215 1e-54 UniRef50_A4SUL6 Resolvase n=1 Tax=Aeromonas salmonicida subsp. s... 199 7e-50 UniRef50_Q47036 Probable site-specific recombinase in afa region... 194 2e-48 UniRef50_A7M7E5 Int2 n=1 Tax=Serratia entomophila RepID=A7M7E5_9... 189 8e-47 UniRef50_B2TSE9 Resolvase n=9 Tax=Enterobacteriaceae RepID=B2TSE... 187 4e-46 UniRef50_B3IBH1 Resolvase n=1 Tax=Escherichia coli E22 RepID=B3I... 177 3e-43 UniRef50_C8QGI0 Integrase family protein n=2 Tax=Pantoea sp. At-... 171 2e-41 UniRef50_Q46776 Resolvase n=16 Tax=root RepID=Q46776_ECOLX 151 2e-35 UniRef50_B2VB47 Putative integrases, DNA breaking-rejoining enzy... 129 8e-29 UniRef50_B3HBE4 ResA resolvase n=3 Tax=root RepID=B3HBE4_ECOLX 128 2e-28 UniRef50_A1U029 Phage integrase family protein n=2 Tax=Marinobac... 104 3e-21 UniRef50_A4BJY9 Resolvase n=1 Tax=Reinekea blandensis MED297 Rep... 100 4e-20 UniRef50_C4UMA5 Site-specific recombinase in afa region n=1 Tax=... 92 2e-17 UniRef50_P03850 Uncharacterized 10.0 kDa protein n=4 Tax=Bacteri... 85 3e-15 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 80 5e-14 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 80 6e-14 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 80 1e-13 UniRef50_Q2NUY3 Putative uncharacterized protein n=1 Tax=Sodalis... 79 2e-13 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 77 6e-13 UniRef50_B7IFN3 Tyrosine recombinase xerC n=3 Tax=Thermotogaceae... 77 7e-13 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 77 8e-13 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 75 2e-12 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 74 4e-12 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 73 9e-12 UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2... 72 2e-11 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 71 4e-11 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 71 4e-11 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 70 1e-10 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 69 1e-10 UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacte... 69 1e-10 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 69 2e-10 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 69 2e-10 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 69 2e-10 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 69 2e-10 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 69 2e-10 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 69 2e-10 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 68 3e-10 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 68 3e-10 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 68 3e-10 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 68 4e-10 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 67 5e-10 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 67 5e-10 UniRef50_UPI0001C37BCF phage-specific recombinase/integrase XerD... 67 8e-10 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 67 9e-10 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 66 9e-10 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 66 9e-10 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 66 1e-09 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 66 1e-09 UniRef50_C9LJA5 Phage-related integrase n=4 Tax=Bacteroidales Re... 66 1e-09 UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia Rep... 66 1e-09 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 66 2e-09 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 65 2e-09 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 65 2e-09 UniRef50_C6N6D9 Putative integrase/recombinase n=1 Tax=Legionell... 65 2e-09 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 65 2e-09 UniRef50_Q2GDW4 Site-specific recombinase, phage integrase famil... 65 2e-09 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 65 3e-09 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 65 3e-09 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 65 3e-09 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 64 4e-09 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 64 4e-09 UniRef50_Q9PL53 Tyrosine recombinase xerD n=15 Tax=Chlamydiaceae... 64 4e-09 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 64 4e-09 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 64 5e-09 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 64 5e-09 UniRef50_C7NA28 Integrase family protein n=5 Tax=Leptotrichia Re... 64 5e-09 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 64 5e-09 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 64 5e-09 UniRef50_Q6MKT3 Integrase/recombinase XerD n=1 Tax=Bdellovibrio ... 64 6e-09 UniRef50_C2G1Y8 Possible tyrosine recombinase n=3 Tax=Bacteroide... 64 6e-09 UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 64 7e-09 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 64 7e-09 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 64 7e-09 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 63 8e-09 UniRef50_A6DT72 Phage integrase n=1 Tax=Lentisphaera araneosa HT... 63 8e-09 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 63 9e-09 UniRef50_A8SVW3 Putative uncharacterized protein n=1 Tax=Coproco... 63 9e-09 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 63 9e-09 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 63 1e-08 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 63 1e-08 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 63 1e-08 UniRef50_A3XLJ3 Tyrosine type site-specific recombinase n=1 Tax=... 63 1e-08 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 63 1e-08 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 63 1e-08 UniRef50_C0W4G9 Phage integrase family protein n=1 Tax=Actinomyc... 63 1e-08 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 63 1e-08 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 63 1e-08 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 62 1e-08 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 62 2e-08 UniRef50_P55632 Putative integrase/recombinase y4qK n=15 Tax=Pro... 62 2e-08 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 62 2e-08 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 62 2e-08 UniRef50_Q30SH3 Integron integrase n=2 Tax=Bacteria RepID=Q30SH3... 62 2e-08 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 62 2e-08 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 62 2e-08 UniRef50_A9IB51 Putative integrase/recombinase n=2 Tax=Bordetell... 62 3e-08 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 62 3e-08 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 62 3e-08 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 62 3e-08 UniRef50_Q3A4T3 Site-specific recombinase XerD n=24 Tax=root Rep... 61 3e-08 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 61 3e-08 UniRef50_B0SBH2 Tyrosine site-specific recombinase XerC n=2 Tax=... 61 3e-08 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 61 4e-08 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 61 4e-08 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 61 4e-08 UniRef50_B3GAN2 AMDV4_11 n=1 Tax=uncultured virus RepID=B3GAN2_9... 61 4e-08 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 61 4e-08 UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga let... 61 4e-08 UniRef50_A0LZY5 Phage integrase family protein n=3 Tax=Bacteria ... 61 4e-08 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 61 4e-08 UniRef50_A5INK7 Phage integrase family protein n=13 Tax=Thermoto... 61 4e-08 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 61 4e-08 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 61 5e-08 UniRef50_Q1MS58 Site-specific recombinase XerC n=1 Tax=Lawsonia ... 61 5e-08 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 61 5e-08 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 60 5e-08 UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybac... 60 5e-08 UniRef50_C8PTU7 Integron integrase n=1 Tax=Treponema vincentii A... 60 6e-08 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 60 6e-08 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 60 6e-08 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 60 7e-08 UniRef50_UPI000197AE3C hypothetical protein BACCOPRO_01802 n=1 T... 60 7e-08 UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA 60 7e-08 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 60 8e-08 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 60 8e-08 UniRef50_B1HMD2 Putative uncharacterized protein n=1 Tax=Lysinib... 60 8e-08 UniRef50_A2U2P8 Phage integrase family protein n=1 Tax=Polaribac... 60 8e-08 UniRef50_D1PKU1 Tyrosine recombinase XerC n=1 Tax=Subdoligranulu... 60 9e-08 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 60 1e-07 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 60 1e-07 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 60 1e-07 UniRef50_C2DP90 Resolvase n=2 Tax=Escherichia coli RepID=C2DP90_... 60 1e-07 UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n... 60 1e-07 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 59 1e-07 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 59 1e-07 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 59 1e-07 UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofil... 59 1e-07 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 59 1e-07 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 59 1e-07 UniRef50_C6LKW3 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 59 1e-07 UniRef50_D2QBI8 Integrase family protein n=2 Tax=Flexibacteracea... 59 1e-07 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 59 1e-07 UniRef50_Q7UY32 Integrase n=3 Tax=Rhodopirellula baltica RepID=Q... 59 2e-07 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 59 2e-07 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 59 2e-07 UniRef50_C7JEV7 Phage DNA recombinase XerD n=9 Tax=Acetobacterac... 59 2e-07 UniRef50_C8JT99 Tyrosine recombinase XerC subunit n=1 Tax=Lister... 59 2e-07 UniRef50_Q83N36 Integrase/recombinase n=2 Tax=Tropheryma whipple... 59 2e-07 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 59 2e-07 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 59 2e-07 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 59 2e-07 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 59 2e-07 UniRef50_A1B4Z4 Phage integrase family protein n=21 Tax=Alphapro... 59 2e-07 UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadacea... 59 2e-07 UniRef50_C6JQF7 Integrase/recombinase n=2 Tax=Fusobacterium RepI... 59 2e-07 UniRef50_A3VV31 Integrase/recombinase XerC, putative n=1 Tax=Par... 59 2e-07 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 59 2e-07 UniRef50_C6XMJ6 Integrase family protein n=1 Tax=Hirschia baltic... 59 2e-07 UniRef50_B1HME0 Putative uncharacterized protein n=2 Tax=Bacilla... 59 2e-07 UniRef50_B0TP43 Integron integrase n=9 Tax=Bacteria RepID=B0TP43... 59 2e-07 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 59 3e-07 UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=... 58 3e-07 UniRef50_D1B6D4 Integrase family protein n=3 Tax=Synergistaceae ... 58 3e-07 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 58 3e-07 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 58 3e-07 UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ... 58 3e-07 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 58 3e-07 UniRef50_Q12Q52 Phage integrase n=12 Tax=Gammaproteobacteria Rep... 58 3e-07 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 58 3e-07 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 58 3e-07 UniRef50_A4BJZ1 Integron integrase; Phage integrase; Phage integ... 58 3e-07 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 58 3e-07 UniRef50_UPI000196B70A hypothetical protein CATMIT_00140 n=1 Tax... 58 3e-07 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 58 4e-07 UniRef50_Q8UC70 Tyrosine recombinase xerC n=18 Tax=Alphaproteoba... 58 4e-07 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 58 4e-07 UniRef50_D1VN48 Integrase family protein n=1 Tax=Frankia sp. EuI... 58 4e-07 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 58 4e-07 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 58 4e-07 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 58 4e-07 UniRef50_Q2RV24 Tyrosine recombinase XerC subunit n=10 Tax=Alpha... 58 4e-07 UniRef50_Q27ZC1 Integrase (Fragment) n=2 Tax=uncultured bacteriu... 57 4e-07 UniRef50_D2LLC2 Integrase family protein n=2 Tax=Aciduliprofundu... 57 4e-07 UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atop... 57 5e-07 UniRef50_Q2NB52 Tyrosine recombinase xerC n=5 Tax=Sphingomonadal... 57 5e-07 UniRef50_Q9F567 IntI2 protein n=38 Tax=Bacteria RepID=Q9F567_ECOLX 57 5e-07 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 57 5e-07 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 57 5e-07 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 57 6e-07 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 57 6e-07 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 57 6e-07 UniRef50_P62590 Integrase/recombinase n=343 Tax=root RepID=INT2_... 57 7e-07 UniRef50_D0Y3M6 Integrase family protein n=1 Tax=Caulobacter seg... 57 7e-07 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 57 7e-07 UniRef50_C6J732 Integrase n=1 Tax=Paenibacillus sp. oral taxon 7... 57 7e-07 UniRef50_B0TG45 Phage recombinase n=1 Tax=Heliobacterium modesti... 57 7e-07 UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase f... 57 8e-07 UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella den... 57 8e-07 UniRef50_Q39RA3 Integron integrase n=3 Tax=Bacteria RepID=Q39RA3... 57 8e-07 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 57 8e-07 UniRef50_A0M0R0 Phage integrase family protein n=1 Tax=Gramella ... 57 8e-07 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 57 8e-07 UniRef50_A3EPL4 Putative phage integrase family protein n=2 Tax=... 57 9e-07 UniRef50_A6DNA4 Integron integrase n=2 Tax=Lentisphaera araneosa... 57 9e-07 UniRef50_B1ZI34 Integrase family protein n=1 Tax=Methylobacteriu... 56 1e-06 UniRef50_Q6ALR8 Probable site-specific recombinase (XerD-like) n... 56 1e-06 UniRef50_Q49HK7 Putative integrase/recombinase n=1 Tax=unculture... 56 1e-06 UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncu... 56 1e-06 UniRef50_Q9A437 Tyrosine recombinase xerD n=11 Tax=Alphaproteoba... 56 1e-06 UniRef50_C3AFM2 Putative uncharacterized protein n=2 Tax=Bacillu... 56 1e-06 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 56 1e-06 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 56 1e-06 UniRef50_A8UM85 Tyrosine type site-specific recombinase n=2 Tax=... 56 1e-06 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 56 1e-06 UniRef50_Q0AGB8 Integron integrase n=5 Tax=Bacteria RepID=Q0AGB8... 56 1e-06 UniRef50_A1SBX6 Phage integrase family protein n=6 Tax=Actinomyc... 56 1e-06 UniRef50_C6Y269 Integrase family protein n=5 Tax=Sphingobacteria... 56 1e-06 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 56 1e-06 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 56 1e-06 UniRef50_C9NXY9 Integron integrase IntI2 n=1 Tax=Vibrio corallii... 56 1e-06 UniRef50_A5V2S7 Phage integrase family protein n=10 Tax=Sphingom... 56 1e-06 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 56 1e-06 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 56 1e-06 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 56 1e-06 UniRef50_B5JDS6 Integron integrase subfamily, putative n=41 Tax=... 56 1e-06 UniRef50_A6LBW5 Integrase n=33 Tax=Bacteroidales RepID=A6LBW5_PARD8 56 1e-06 UniRef50_Q89XW5 Tyrosine recombinase xerD n=10 Tax=Alphaproteoba... 56 1e-06 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 56 2e-06 UniRef50_A6H1H3 Integrase/recombinase n=2 Tax=Bacteria RepID=A6H... 56 2e-06 UniRef50_C1VB02 Site-specific recombinase XerD n=1 Tax=Halogeome... 55 2e-06 UniRef50_C6JH03 Putative uncharacterized protein n=2 Tax=Clostri... 55 2e-06 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 55 2e-06 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 55 2e-06 UniRef50_B0TD09 Phage integrase n=3 Tax=Bacteria RepID=B0TD09_HELMI 55 2e-06 UniRef50_A9DNU9 Tyrosine type site-specific recombinase n=2 Tax=... 55 2e-06 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 55 2e-06 UniRef50_A1ASA0 Integron integrase n=8 Tax=Bacteria RepID=A1ASA0... 55 2e-06 UniRef50_C4ZGY6 Tyrosine recombinase xerC n=3 Tax=Clostridiales ... 55 2e-06 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 55 2e-06 UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=unculture... 55 2e-06 UniRef50_A6G048 Site-specific recombinase, phage integrase famil... 55 2e-06 UniRef50_Q7NHT4 Glr2451 protein n=1 Tax=Gloeobacter violaceus Re... 55 2e-06 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 55 2e-06 UniRef50_A8L6T4 Integrase family protein n=5 Tax=Actinomycetales... 55 2e-06 UniRef50_Q30R56 Tyrosine recombinase XerD subunit n=5 Tax=Epsilo... 55 2e-06 UniRef50_Q7UUP7 Probable integrase/recombinase Y4QK n=2 Tax=Rhod... 55 2e-06 UniRef50_A9KXF6 Integrase family protein n=1 Tax=Shewanella balt... 55 2e-06 UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia g... 55 3e-06 >UniRef50_P18021 Resolvase n=83 Tax=root RepID=REDM_ECOLX Length = 260 Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust. Identities = 235/250 (94%), Positives = 239/250 (95%) Query: 17 VYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATL 76 ++ A LPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL RKMLLATL Sbjct: 8 IHHARDAVQLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKMLLATL 67 Query: 77 WNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD 136 WNTGARINEALALTRGDFSL PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD Sbjct: 68 WNTGARINEALALTRGDFSLTPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD 127 Query: 137 SWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFS 196 SWYVSQLQTMVA LKIPMERRN+RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFS Sbjct: 128 SWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFS 187 Query: 197 VPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 VPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF+MP Sbjct: 188 VPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFSMP 247 Query: 257 ESDAVAMLKQ 266 ESDAV MLK Sbjct: 248 ESDAVTMLKN 257 >UniRef50_D1S150 DNA integration/recombination/invertion protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S150_SEROD Length = 264 Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/258 (49%), Positives = 166/258 (64%), Gaps = 5/258 (1%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S+ + P Q + + DY AL LRQM+M +D+LPKYLLAPEV+A LHYV + Sbjct: 2 SKLLIHYPTSGGVNQSSQMIAPQDYQRALELRQMAMTYDDLPKYLLAPEVAAQLHYVEEW 61 Query: 68 HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQ 127 + + LWNTGARINEALA+ R DF L P V T KQR +A GR G+ Sbjct: 62 SQHAFVNLLWNTGARINEALAVCRRDFRLNVTMPHVIYRTAKQR--RAG--PGRPKKGKS 117 Query: 128 THRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAA 187 HR+VPL+D +V +L+ + A K E N TG IW+VTDRTVR W+ +A Sbjct: 118 AHRIVPLTDPLFVDELRRLFASTKEQFEI-NPETGERTPLPIWQVTDRTVRNWLTKAENQ 176 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 A DG+ FS+P+TPH FRHSYAMHM+Y G PLKVLQ L+GH+ STEVYT+VFALD+ A Sbjct: 177 ARRDGIRFSIPITPHVFRHSYAMHMIYQGTPLKVLQGLLGHEKPESTEVYTRVFALDIVA 236 Query: 248 RHRVQFAMPESDAVAMLK 265 H+VQF++P D++ M++ Sbjct: 237 SHQVQFSLPAQDSLDMVR 254 >UniRef50_Q6TFY0 ResD n=8 Tax=Enterobacteriaceae RepID=Q6TFY0_ERWAM Length = 246 Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 114/230 (49%), Positives = 150/230 (65%), Gaps = 17/230 (7%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 DY ALALR+M+ D LPKYLLAPEVS L YVPDL +++L TLWNTGARINEALAL Sbjct: 27 FDYADALALREMASQAD-LPKYLLAPEVSVFLRYVPDLRQQVLFDTLWNTGARINEALAL 85 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 T F L PFV+L TLKQR R GR ++ RLVPL+D YV +++ + Sbjct: 86 TGASFQLDGSRPFVRLKTLKQR----QRGRGRPGKDEEVFRLVPLTDPQYVRKVREFLTT 141 Query: 150 LKIPMERRNRRTGRTEKARIWEV-TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 L+I ++ +W V +D T R WI +A+ A D VTFS+PVT HTFRHS+ Sbjct: 142 LRI-----------GKQQLLWPVQSDNTPRNWIRKALDLAKRDSVTFSIPVTCHTFRHSF 190 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPES 258 MH++ G+PLKV+Q+ GH + +TE YT+VFALDV ++ V+F++P+S Sbjct: 191 CMHLIQHGVPLKVVQAYAGHSRLETTETYTRVFALDVGRQYGVRFSLPDS 240 >UniRef50_A4SUL6 Resolvase n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUL6_AERS4 Length = 256 Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 115/234 (49%), Positives = 144/234 (61%), Gaps = 22/234 (9%) Query: 15 PAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLA 74 P V AG P VA ALR +++ H + P+YLLA EV A+L +PDL R++L+A Sbjct: 24 PLVRPAGNPEQWRVAT------ALRNLAIAHTDAPRYLLAHEVGAVLAMLPDLQRRVLIA 77 Query: 75 TLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPL 134 TLWNTGARINEALALT GDF L PFV L TLKQR+ R GR AG RLVPL Sbjct: 78 TLWNTGARINEALALTPGDFELDGGRPFVVLRTLKQRS----RGKGRPRAGDAVKRLVPL 133 Query: 135 SDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVT 194 D + + +A +K+ ARIW VTD+TVR W+ EA A GV Sbjct: 134 LDPVFAQLAREYLATVKL-----------ARGARIWPVTDQTVRNWLKEADTALRGRGVH 182 Query: 195 FSVPVTPHTFRHSYAMHMLYAG-IPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 VP+TPH FRH++AMH+L G + +K LQ+ +GH+S+ STEVYT+V ALD AA Sbjct: 183 LVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAA 236 >UniRef50_Q47036 Probable site-specific recombinase in afa region n=45 Tax=Bacteria RepID=INTL_ECOLX Length = 246 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 118/257 (45%), Positives = 154/257 (59%), Gaps = 20/257 (7%) Query: 13 MVPAVYSAGQPASLPVA--IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRK 70 ++P S + + LP+A +D+ AL+LR+M+ P YLLAPEVSALL Y+PD Sbjct: 4 VIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHH 63 Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 ML ATLWNTG RI EA +T F L PFV++ + K R + GR P + R Sbjct: 64 MLFATLWNTGMRIGEARIVTPESFDLDGVRPFVRVLSEKVRARR-----GRPPKDEV--R 116 Query: 131 LVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAA 190 LVPL+D YV Q+++ + + R RR + +W VTD T+R W+ +AV A A Sbjct: 117 LVPLTDISYVRQMESWM------ITTRPRR-----REPLWAVTDETMRNWLKQAVRRAEA 165 Query: 191 DGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 DGV FS+ VTPHTFRHSY MHMLY P KV+Q+L GH+ S EVYT+VFALD+AA Sbjct: 166 DGVHFSISVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLA 225 Query: 251 VQFAMPESDAVAMLKQL 267 V F DA +L+ L Sbjct: 226 VPFTGDGRDAAEILRTL 242 >UniRef50_A7M7E5 Int2 n=1 Tax=Serratia entomophila RepID=A7M7E5_9ENTR Length = 236 Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 104/236 (44%), Positives = 140/236 (59%), Gaps = 13/236 (5%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 D+ A+A+R+M++ + P YLLAPE++ LL + DL R+ML LWNTGARINEALA+ Sbjct: 9 FDFAQAVAMRRMALNLSDQPAYLLAPEITLLLDNMTDLRRRMLFDFLWNTGARINEALAV 68 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 T D L PFV L TLKQR A R GR R +PL D + +L+ +A Sbjct: 69 TPKDIVLDAVKPFVVLRTLKQRNHTAGR-RGRPGKDTPVKRTLPLLDPSFARRLRDHLAT 127 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHSY 208 R +WE++D T R W+ EA+ A +G+ FS+ +TPHTFRHS+ Sbjct: 128 FT-----------RYVTKPVWEISDDTARNWLKEALGHAQRNGMHFSIESITPHTFRHSF 176 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAML 264 AMH+LY + K+LQS MGH+ STE+YT+VFALDVA + V+F M A +L Sbjct: 177 AMHLLYNRVHPKILQSFMGHRDYKSTEIYTRVFALDVAGQLGVRFDMTPEQAFKLL 232 >UniRef50_B2TSE9 Resolvase n=9 Tax=Enterobacteriaceae RepID=B2TSE9_SHIB3 Length = 299 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 108/236 (45%), Positives = 138/236 (58%), Gaps = 29/236 (12%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAP----PYPFV 103 +PKYL+APEVS LL Y+ DL+ +M TLWNTGAR+NEALAL DF L P P P V Sbjct: 65 MPKYLIAPEVSLLLSYIDDLNIRMYFETLWNTGARLNEALALKPADFMLTPTRQYPQPVV 124 Query: 104 QLATLKQRTEKAARTAGR--------------MPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 L TLKQR ++A R GR + RLVP+ D+ Y +++ +A Sbjct: 125 ILKTLKQRLKEAERRPGRPTTRHPPLHPDPRYRKPQEPAVRLVPVLDAGYALRMREYLAT 184 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDR-TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 K R + +W++T R T WI AVA A DGVTFSVPVTPHTFRHSY Sbjct: 185 WK----------KRIKHQPVWDITSRQTPLNWINTAVARAERDGVTFSVPVTPHTFRHSY 234 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAML 264 AMH+ +G+P +VLQSL+GH+ STE+YT+VF+LDV + F A +L Sbjct: 235 AMHLTMSGVPPRVLQSLLGHRYARSTEIYTRVFSLDVLTGSGLSFTCDPRRAKQLL 290 >UniRef50_B3IBH1 Resolvase n=1 Tax=Escherichia coli E22 RepID=B3IBH1_ECOLX Length = 236 Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/237 (43%), Positives = 144/237 (60%), Gaps = 16/237 (6%) Query: 29 AIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALA 88 A +Y A+ALR M+++ LPKYLLAPEV+ LLHY+PD ++ML ATLW TG RI EAL Sbjct: 12 ATNYETAIALRGMALLQPYLPKYLLAPEVAVLLHYLPDERQRMLFATLWITGPRITEALT 71 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 +T D L P ++L LKQR R GR A ++ R+VPL D+ YV QL+ +A Sbjct: 72 ITPEDLQLDGPRHCIRLRKLKQRQ----RGRGRPSADEKIARIVPLLDAAYVDQLRRYLA 127 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHS 207 RTGR + ++ V+ +T W+ +A+ A + + F++P + P T RHS Sbjct: 128 TF---------RTGR--RRPLFAVSRKTAWLWMQQAIDRAREEVIEFALPAINPKTLRHS 176 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAML 264 +AMH+ + +P KV+Q+ MGH+ STEVY KVFALDVA + V F++ D +L Sbjct: 177 FAMHLYFNHVPPKVVQAYMGHERYESTEVYLKVFALDVAPQLGVTFSLAHRDYSHLL 233 >UniRef50_C8QGI0 Integrase family protein n=2 Tax=Pantoea sp. At-9b RepID=C8QGI0_9ENTR Length = 239 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 141/244 (57%), Gaps = 38/244 (15%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPY------- 100 +P+YLLAPEV+ LL V DL +++ + LWNTG R+NE L LTR DF L P Sbjct: 1 MPRYLLAPEVAVLLAKVTDLRKRLFIDALWNTGGRLNEILPLTREDFVLDDPLTGAPLSS 60 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTH------------------RLVPLSDSWYVSQ 142 PFV L TLKQR + A G+ T R VPL+D +V + Sbjct: 61 PFVVLRTLKQRGLEEAARNRSRRRGRPTKEEQQAEREAEAEIRDNPPRAVPLTDPGFVQR 120 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEV-TDRTVRTWIGEAVAAAAADGVTFSV-PVT 200 L+ A + P AR+W++ ++ T R+WI +AVAAA DGVTFS+ PVT Sbjct: 121 LREWFATVNPPA-----------GARLWDIRSEDTARSWISQAVAAAERDGVTFSIRPVT 169 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDA 260 P TFR S+AMH++ +P KV+Q+LMGHK STE YT+VFALDV + V+F+M ++A Sbjct: 170 PKTFRDSFAMHLVQHQVPQKVIQTLMGHKDAKSTEWYTRVFALDVTRQLGVRFSMDPAEA 229 Query: 261 VAML 264 ++L Sbjct: 230 RSLL 233 >UniRef50_Q46776 Resolvase n=16 Tax=root RepID=Q46776_ECOLX Length = 178 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/204 (44%), Positives = 114/204 (55%), Gaps = 30/204 (14%) Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 +PD ML AT+WNTG RI EA LT F L PFV++ + K R Sbjct: 1 MPDQRHHMLFATMWNTGIRIGEARTLTPESFDLDGLRPFVRVLSEKVR------------ 48 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 LVPL+D +V Q+++ + R RR + +W VTD T+R W+ + Sbjct: 49 -------LVPLTDVSFVRQMESWMVTT------RPRR-----REPLWPVTDETMRNWLKQ 90 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 AV A ADGV FS+PVTPHTFRHSY MHMLY P KV+Q+L GHK S EVYT+VFAL Sbjct: 91 AVKRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHKDPRSMEVYTRVFAL 150 Query: 244 DVAARHRVQFAMPESDAVAMLKQL 267 D+AA V F DA +L+ L Sbjct: 151 DMAATLAVPFTGDGHDAAQILRTL 174 >UniRef50_B2VB47 Putative integrases, DNA breaking-rejoining enzymes n=1 Tax=Erwinia tasmaniensis RepID=B2VB47_ERWT9 Length = 309 Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 136/291 (46%), Gaps = 56/291 (19%) Query: 25 SLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARIN 84 S P A L +R ++ + +YLL EVSAL+ Y +K+L LWNTG R++ Sbjct: 10 SGPDARTLSCQLRMRSLAASMEGGVRYLLPVEVSALIGYAGSHEQKILFRLLWNTGMRVS 69 Query: 85 EALALTRGDFSLA-----------------------PPYPF------------------- 102 EALALT D L P P Sbjct: 70 EALALTARDCILTQDDEVRLMRRRGARKSDAVTKGRPDGPLRDSGGSPLLPQVIPDDSYQ 129 Query: 103 --VQLATLKQRTEKAAR---TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 V + +LK+ A R T A RL+PL D + + L++ + RR Sbjct: 130 AAVLVRSLKRHCGSATRGKPTEAERRAENAAKRLIPLLDPAFAADLKSYRDGVLFGPVRR 189 Query: 158 NRRTGRTEKARIWEVTDR-TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +W V+ R +V WI AV AAADGV FSVPV+PHTFRHSYAM+ML AG Sbjct: 190 ------ALDEPLWTVSSRQSVLNWINAAVTRAAADGVQFSVPVSPHTFRHSYAMYMLNAG 243 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAMLKQL 267 + ++L +LMGH+S+ + +YT+VFALD + + F P DA +LK + Sbjct: 244 VTDRLLMALMGHRSLKTLGIYTRVFALDRLSGSYLPFDCP--DARDLLKNV 292 >UniRef50_B3HBE4 ResA resolvase n=3 Tax=root RepID=B3HBE4_ECOLX Length = 92 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/79 (79%), Positives = 68/79 (86%) Query: 22 QPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGA 81 Q A LPVAIDYPAALALRQM+++ +LPKYLLAPEVSAL HYVPDLHR+MLLATLWNT Sbjct: 12 QSAPLPVAIDYPAALALRQMALIQGKLPKYLLAPEVSALHHYVPDLHRRMLLATLWNTYI 71 Query: 82 RINEALALTRGDFSLAPPY 100 INEALALT DFSL PPY Sbjct: 72 CINEALALTLSDFSLVPPY 90 >UniRef50_A1U029 Phage integrase family protein n=2 Tax=Marinobacter RepID=A1U029_MARAV Length = 246 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 23/222 (10%) Query: 28 VAIDYPAALALRQMSMVH-DELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEA 86 V ID+ +A R M + D +PKYLL PE+ LL +++L +W TGAR++E Sbjct: 36 VEIDWDRLIAKRPMLLESLDTMPKYLLKPEILGLLESESHPMHRLILDLMWCTGARVSEV 95 Query: 87 LALTRGDFSLAPPYPF-VQLATLKQRTEK-AARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 LA+T F + Y F V L TLKQ + + R+ R P R +P+ D + +++Q Sbjct: 96 LAITPASF-IDDGYDFGVMLKTLKQGAGRPSKRSLQRSPK-----RFIPILDRDFQTRIQ 149 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 + + K + RI+ +T + V I + + + HTF Sbjct: 150 SYLWMGKF-----------RKDERIFPITRQAVSANIDRLIDQVGGEP---PFKIGCHTF 195 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 RHS+A+H+L G PLK + L+GH+S+ S EVYT V D A Sbjct: 196 RHSFAVHLLLHGRPLKFVSQLLGHRSVESPEVYTNVLTFDGA 237 >UniRef50_A4BJY9 Resolvase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJY9_9GAMM Length = 262 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 25/227 (11%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEAL 87 + ID+ L LR + HD YLL PE++ L+ ++L ATLW TG RI+E L Sbjct: 43 IVIDWARFLKLRPWVLQHDPELSYLLLPEMTQLIESARTEQMRVLFATLWVTGGRISEVL 102 Query: 88 ALTR----GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL 143 A+T D L + L TLK+R Q +RLVP+ D Y + L Sbjct: 103 AMTPAHCINDDHLGQG---IALPTLKKRN-------------GQPYRLVPVVDPHYWAML 146 Query: 144 QTMVAQLK----IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV 199 + + + + P+ + +T ++A+ +T RTV+ W +A+ + + V Sbjct: 147 KRFLGEHRGGQHAPIFQSRTKTTDAKRAKPKALTSRTVQRWTDDAMERLR-EHYNPGLRV 205 Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 TPHTFRHS+A++ L G ++V+ +GH S+ TE Y KV +LD Sbjct: 206 TPHTFRHSFAVNALLHGRDIQVISGWLGHASVRETERYLKVLSLDTG 252 >UniRef50_C4UMA5 Site-specific recombinase in afa region n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UMA5_YERRU Length = 234 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/91 (48%), Positives = 60/91 (65%) Query: 25 SLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARIN 84 S+ +D+ ALALR+M+ + + P YLLAPE+SALLHY+PD L +TLWNTGARI Sbjct: 106 SIAPGVDFATALALRRMATANGKTPFYLLAPEISALLHYMPDQRHHFLFSTLWNTGARIG 165 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 EA ++ F L P PFV++ + K RT + Sbjct: 166 EACSMQPESFILDGPRPFVRILSEKVRTRRG 196 >UniRef50_P03850 Uncharacterized 10.0 kDa protein n=4 Tax=Bacteria RepID=YPB2_ECOLX Length = 87 Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 41/53 (77%), Positives = 44/53 (83%) Query: 56 EVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATL 108 EVSAL HYVPDLHR+MLLATLWNT INEALALT DFSL PP+P+ QL TL Sbjct: 31 EVSALHHYVPDLHRRMLLATLWNTYICINEALALTLSDFSLVPPHPYRQLFTL 83 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 38/213 (17%) Query: 43 MVHDELPKYLLAPEVSALLH-----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLA 97 M LPK + EV+ +L L + LL L++TGARI+EA+ L D SLA Sbjct: 159 MAGKRLPKAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDISLA 218 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS-------DSWYVSQLQTMVAQL 150 TE+ R+ RLVPL +++ V + A+ Sbjct: 219 -----------GDDTEQGPAIV-RLFGKGSKERLVPLGSYGARALEAYLVRGRPLLAAKG 266 Query: 151 K-IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 K P N R GR + W + AA+ + V+PHT RHS+A Sbjct: 267 KGTPALFLNARGGRISRQSAWTILK-------------VAAEKANITRDVSPHTLRHSFA 313 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 H+L G ++V+Q L+GH S+++T+VYT V A Sbjct: 314 THLLEGGADVRVVQELLGHASVTTTQVYTLVTA 346 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 35/205 (17%) Query: 48 LPKYLLAPEVSALLHYVPDLH------RKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP +L E+ LL PD H + LL L+ TG R+ E +AL RGD + + Sbjct: 150 LPVFLDEEEIGGLLSQ-PDTHTPLGLRDRALLELLYATGLRVGELVALNRGDIDYSEGWV 208 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVP--LSDSWYVSQLQTMVAQLKIPMERR-- 157 V K R E+A +P G + + + L D W V + + A+ +P ++ Sbjct: 209 IVWG---KGRKERA------VPVGSEALQALGHYLRDGWPVLRARAPAAEQSLPEAKQPL 259 Query: 158 --NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 N+ GR ++DR+VR + V+ A S ++PH RH++A HML Sbjct: 260 FLNKLGGR--------LSDRSVRRLLDRYVSQLA-----LSRQISPHKIRHTFATHMLNH 306 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q ++GH S+S+T++YT V Sbjct: 307 GADLRAVQEMLGHASLSTTQIYTHV 331 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 44/206 (21%) Query: 47 ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP L E+ LL+ +P ++ K+++ L+ TG RI+E L+++ D +L Sbjct: 124 QLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRISELLSISLHDLNL----- 178 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW------YVSQLQTMVAQLK-IPM 154 TE+ G+ R VP D+ Y+ Q + ++ +LK + Sbjct: 179 ----------TERVILVHGK----GSKQRYVPYVDTLDELFAKYLKQSRPILLKLKQSEL 224 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 N R R + W++ +R + EA VTPHTFRHS+A H+L Sbjct: 225 LFLNNRGERMSRMGFWKI----LRKAVLEA---------NIKKEVTPHTFRHSFATHLLE 271 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G+ L+++Q+L+GH SI +T++YT + Sbjct: 272 GGVNLRIVQALLGHSSIDTTQIYTHI 297 >UniRef50_Q2NUY3 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NUY3_SODGM Length = 239 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 1/71 (1%) Query: 30 IDYPAALALRQMSMVHD-ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALA 88 DY +A+ALR ++ + ++P+YLLAPEV+ LL V DL +++ + LWNTG R+NE L Sbjct: 72 FDYESAVALRNLAAAYGTDMPRYLLAPEVAVLLSKVTDLRKRLFIDALWNTGGRLNEILP 131 Query: 89 LTRGDFSLAPP 99 LTRGDF L P Sbjct: 132 LTRGDFVLDDP 142 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 38/206 (18%) Query: 48 LPKYLLAPEVSALLHYVPD---------LHRKMLLATLWNTGARINEALALTRGDFSLAP 98 LPK L EV ALL V L + LL L++TG+RI+EA+ L D Sbjct: 119 LPKSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGLDVDDVDTQA 178 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV----AQLKIPM 154 +Q KQR R A V D++ V + L P Sbjct: 179 RTVLLQGKGGKQRLVPVGRPA------------VQALDAYLVRGRSDLARRGPGMLATPA 226 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 N R GR + W+V AA+ + V+PH RHS+A H+L Sbjct: 227 IFLNARGGRLSRQSAWQVLQ-------------DAAEHAGITSGVSPHMLRHSFATHLLE 273 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G ++V+Q LMGH S+++T++YT V Sbjct: 274 GGADIRVVQELMGHASVTTTQIYTLV 299 >UniRef50_B7IFN3 Tyrosine recombinase xerC n=3 Tax=Thermotogaceae RepID=XERC_THEAB Length = 283 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 35/197 (17%) Query: 47 ELPKYLLAPEVSALL---HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 ++P +L EVS+L+ + +L +K ++ L+ G RI+E L D S PP+ V Sbjct: 107 KIPDFLTEDEVSSLIGAFNEENELRQKTAISLLYYAGLRISELCNLRTTDISFIPPFLRV 166 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 ++ GR RLVPL D ++ LK ++ N + Sbjct: 167 EMG------------KGR------KDRLVPLPDK--------VIPILKKYIDLENPKIFV 200 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 E + V TV W+ E V A V PHT RHSYA H++ G+ +KV+Q Sbjct: 201 FENGK-KHVHPSTVFRWLKEGVKRA-----NIKKDVHPHTLRHSYATHLIRKGVNIKVVQ 254 Query: 224 SLMGHKSISSTEVYTKV 240 L+GH ++S+T +Y V Sbjct: 255 ELLGHTNLSTTSIYLHV 271 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 49/219 (22%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGD 93 Q + LPK + E++A+L L L+ L+ TGARI E + L+ D Sbjct: 112 QQKKLGKHLPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPDD 171 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 LA +P V+L K R E RLVPL S+ V L+ + + Sbjct: 172 LYLAGEFPHVKLFG-KGRKE----------------RLVPLG-SFAVQALEDYLLLGRPL 213 Query: 154 MERR------------NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 + + N+R + WE+ +T AVAA V+P Sbjct: 214 LLGKAKTRVAGHPLFLNKRGLSLSRQSAWEIISQT-------AVAAGCVS------EVSP 260 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 H+ RHS+A H+L G ++ +Q L+GH S+++T++YTKV Sbjct: 261 HSLRHSFATHLLEGGASIRDVQELLGHASVTTTQIYTKV 299 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 42/200 (21%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+YL EV+AL+ +V L + LL L+ TG R++E + L GD L+ + Sbjct: 109 LPRYLHEEEVAALIDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGDLDLSAGFAR 168 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V ++R R A R +PL D +++ + NRR G Sbjct: 169 VLGKGGRERYVMVGRRAV-----DALRRYLPLRDR--MARCSAVFI---------NRRGG 212 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP----VTPHTFRHSYAMHMLYAGIP 218 R +TDR+VR + + VP + H RHS+A HML G Sbjct: 213 R--------LTDRSVRRVLERRIQ---------EVPGLRSIHVHGLRHSFATHMLNGGAD 255 Query: 219 LKVLQSLMGHKSISSTEVYT 238 L+ +Q L+GH S+SST++YT Sbjct: 256 LRSVQELLGHASLSSTQIYT 275 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 49/208 (23%) Query: 48 LPKYLLAPEVSALLHYVPD--------LHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 +PK L EV+A+L P+ + + LL L++TGAR++E L L D Sbjct: 113 IPKALSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVD---- 168 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR-- 157 P +L ++ + K R+VP+ D + LQ + +++ ++ Sbjct: 169 -PTEKLIIVRGKGSK--------------ERVVPVGDP-ALDALQHYLVRVRPAFNKKGS 212 Query: 158 -----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 NR GR + + + + + E A V+PH+FRHS+A H+ Sbjct: 213 AALFLNRNGGRMGRQSAFNMV-----SSVSEKAGVAG---------VSPHSFRHSFATHL 258 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKV 240 L G ++V+Q L+GH ++ +T++YTKV Sbjct: 259 LEGGADIRVVQELLGHSNVVTTQIYTKV 286 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 32/199 (16%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP YL PE+ LLH + K ++ L++ G RI+E L F+ + Sbjct: 104 LPDYLSLPEIERLLHIYDEAIPLQFRNKFIIELLYSCGLRISELCGLRTDSFNYESGFLR 163 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V+ K+R+ +P G Q V Y+ ++ + + P E G Sbjct: 164 VKGKGSKERS---------VPFGTQ----VASMSRQYIKNIRPQLCKKNNPPELIVSNNG 210 Query: 163 R-TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 R ++R+W+ ++ EA A + + PH RHS+A H+L L++ Sbjct: 211 RPLTRSRVWQ--------FLKEAAIKAEINK-----NLHPHVLRHSFASHLLSNNADLRI 257 Query: 222 LQSLMGHKSISSTEVYTKV 240 +Q L+GH I++TE+YT V Sbjct: 258 IQELLGHADIATTEIYTHV 276 >UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2S2Y8_TREPS Length = 306 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 42/220 (19%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+ L +V+ L +P + + L ++ G R++EA++L+ D A Sbjct: 108 LPRVLSPEQVNTFLQSIPLCTPGGVRDRALFELIYAAGLRVSEAVSLSLSDIFFAERLLK 167 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP--MERR--- 157 V T K E+ A P G+Q + Y+ + + K P E++ Sbjct: 168 V---TGKGNKERMA------PFGEQACYFL----MQYIREARVRFTSAKHPENSEKKGAV 214 Query: 158 --NRRTGRTEKARIWE-VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 NR+ GR + IW+ + D +R+ + V HTFRHSYA H+L Sbjct: 215 FLNRQGGRLSRKGIWKRLQDIEIRSGVETHV----------------HTFRHSYATHLLA 258 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 G+ L +Q L+GH I++T+VYT V + A HR F+ Sbjct: 259 GGVDLHSVQCLLGHADIATTQVYTHVENGQLEACHRACFS 298 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 28/199 (14%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP+ L E+ ALL L + LL L+ +GARI+EA+ L D Sbjct: 124 LPETLSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLVLDDIDFETEPA 183 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V+L K R E+ + G Q LQ + +++ + + + Sbjct: 184 LVRLFG-KGRKERISML------GHQA-----------CQALQAYLVRVRPTLAEKGQSR 225 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 GR + R W A+ AAA PV PHT RH +A H+L G ++V Sbjct: 226 GRVFLNTYGKPMSRQT-AW---AIIQAAAKRAQIDRPVHPHTLRHCFATHLLQGGADIRV 281 Query: 222 LQSLMGHKSISSTEVYTKV 240 +Q L+GH S+++TE+YTKV Sbjct: 282 VQELLGHASVTTTEIYTKV 300 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 40/205 (19%) Query: 47 ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP +L E+ L D + +L L+ TG R+ E L D L Sbjct: 130 KLPSFLYEEEMDELFKAFEGNTPLDKRDRAILELLYATGMRVGECSQLDVADIDLRIGTA 189 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 FV+ K+R VP+ S+ L + ++ + ++ Sbjct: 190 FVKGKGNKER-------------------YVPIG-SFACDALHEYIEDARVNLLKK---- 225 Query: 162 GRTEKARIW------EVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 G +E R++ +TDR++R + + V A+ + PH RHS+A H+L Sbjct: 226 GNSETKRLFLNYRGGPLTDRSIRRMLAKRVEEAS-----MQKHIRPHDLRHSFATHLLNN 280 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+V+Q L+GH+ +S+T+VYT V Sbjct: 281 GADLRVVQELLGHEHLSTTQVYTHV 305 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 52/206 (25%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+ L EV ++ + L + LL + G RI E LT D L Y Sbjct: 104 LPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDLTQGY-- 161 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 R G+ + R+VPL + + LK+ +E G Sbjct: 162 -------------VRVTGK----GRRQRIVPLG--------KYALDSLKLYLE-----AG 191 Query: 163 R------TEKARIWE----VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 R +EK + + +T R +R I + V A + +TPHTFRHSYA H+ Sbjct: 192 RPAFKPKSEKLFLNQQGAGLTVRGIRYLISQIVKKAG-----LNRKITPHTFRHSYATHL 246 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYT 238 L G ++ +Q L+GHK +S+TE+YT Sbjct: 247 LEGGADIRAVQELLGHKRLSTTEIYT 272 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 48/204 (23%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +P++L E+ LL + D + + ++TG R++E L GD Sbjct: 115 IPQFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDI-------- 166 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD------SWYVSQLQTMVAQLKIPMER 156 R R G+ RLVP+ D Y + + L + Sbjct: 167 -------DRESHLVRVRGK----GNRERLVPVGDRALKAVDDYRTCIDGEFGALFL---- 211 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 NR R +D ++R + V A VPV+PHT RHS+A HML AG Sbjct: 212 -NRDAHR--------FSDSSIRRVLSVLVKACG-----LGVPVSPHTLRHSFATHMLDAG 257 Query: 217 IPLKVLQSLMGHKSISSTEVYTKV 240 L+ +Q ++GH S+SST++YT V Sbjct: 258 ADLRGIQEILGHASLSSTQIYTHV 281 >UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM Length = 300 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 42/203 (20%) Query: 48 LPKYLLAPEV----SALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LP YL EV S+ D + K +L L++ G R++E L D L Sbjct: 108 LPVYLSVDEVKKVFSSFQDNEIDQYNKTILVVLYSCGLRVSELCDLKLNDVHL------- 160 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN----- 158 TE+ + G+ G + R++P+S S+ VSQ++ + ++ + +N Sbjct: 161 --------TEQILKVKGK---GDKE-RIIPIS-SYCVSQMKYYLDSIRFVWDVKNVSYFF 207 Query: 159 -RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 R G T + V I + V + + + ++ H+FRHS+A H+L Sbjct: 208 VNRLGHI-------CTRQYVHLMIKQKV-----NELNLNPKISAHSFRHSFATHLLDGDA 255 Query: 218 PLKVLQSLMGHKSISSTEVYTKV 240 L+++Q L+GH +IS+T++YT + Sbjct: 256 DLRIVQELLGHSNISTTQIYTHI 278 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 53/208 (25%) Query: 48 LPKYLLAPEVSALLHYVPDLHR------KMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK + EV L PDL + + +L ++ TG R++E L+L R +L Y Sbjct: 112 LPKVMSLEEVKQLFS-APDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYV 170 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN--- 158 K+R L+PL + + L+ +AQ++ P+ +N Sbjct: 171 IAYGKGAKER-------------------LIPLG-QYAIQYLKKYLAQVR-PLFVKNGKD 209 Query: 159 --------RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 R TG T + R W++ +R + V A P+TPH RHS+A Sbjct: 210 DDSLFLTIRGTGMT-RQRFWQI----IRAY---GVKAG------LQKPLTPHILRHSFAT 255 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYT 238 HML G L+ +Q L+GH IS+T++YT Sbjct: 256 HMLDNGADLRTVQELLGHADISTTQIYT 283 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 42/177 (23%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 LL L+ TGARI+EA+ L D L + A+++ + GR R+ Sbjct: 254 LLELLYGTGARISEAVGLDVDDLDL-------EAASVRLHGK-----GGR-------DRI 294 Query: 132 VPL--------SDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 VPL +D V + T+VA P +RR R + W V +RT Sbjct: 295 VPLGRYAIAAVADYLRVGR-PTLVAPRSGPAVFLSRRGNRLSRQSAWSV----LRT---- 345 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A AA +GV+ PH RHS+A H+L G ++V+Q L+GH S+S+T++YT V Sbjct: 346 AALAAGVEGVS------PHVLRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLV 396 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 39/215 (18%) Query: 44 VHDELPKYLLAPEVSALLHY--VPDL---HRKMLLATLWNTGARINEALALTRGDFSLAP 98 V +LP+ L EV LL DL K +L L+ TG R++E ++L D +L Sbjct: 105 VEKKLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDVNLEM 164 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN 158 Y R K AR R+VP+ S V+ LQ + + RN Sbjct: 165 QYI---------RCNKGAR-----------ERIVPIG-SVSVNALQEYLTK------SRN 197 Query: 159 RRTGR-TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 R EKA V + + + + + +TPHT RHS+A H+L G Sbjct: 198 LLIQRPDEKALFVNVNGKRLTRQGFWKIIKQYKNQAKINKDITPHTLRHSFAAHLLENGA 257 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 L+ +Q ++GH ISST++Y ++ A++R++ Sbjct: 258 DLRSIQEMLGHSDISSTQIYAQL------AKNRIK 286 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 48/232 (20%) Query: 20 AGQPASLPVAI-DYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWN 78 AGQ S PVA+ P + H E+ K L P + L L + +L TL+ Sbjct: 94 AGQVQSSPVALLSGPRREKRLPGCLSHAEMEKLLSIPATTPL-----GLRDRAILETLYA 148 Query: 79 TGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD-- 136 +G R+ E + + + D L Y AR G+ + R+VPL Sbjct: 149 SGIRVAELVGMDQDDLDLVAGY---------------ARVLGK----GRRERVVPLGRYA 189 Query: 137 ----SWYVSQLQTMVAQLKIPMERR----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAA 188 Y+ + + +A +IP E R N GR +T R VR + V A Sbjct: 190 VKALENYLHRARPELAARRIPPEPRALFLNHLGGR--------LTTRGVRERLSHYVEKA 241 Query: 189 AADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A V+PHT RH++A H+L G L+V+Q L+GH +++T++YT + Sbjct: 242 A-----LRRGVSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYTHI 288 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 57/212 (26%) Query: 48 LPKYLLAPEVSALLHYVP------------DLHRKMLLATLWNTGARINEALALTRGDFS 95 LPK L EV +L+ V + K++L L++TG RI+E + L + D Sbjct: 139 LPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRISELVKLQKKDID 198 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLV-------PLSDSWYVSQLQTMVA 148 E+ R G+ G++ R+V L D++ +Q Q Sbjct: 199 FD---------------ERTIRVRGK---GEK-DRIVLFDENTRDLIDNYIETQNQKS-E 238 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 L I + GR ++T R V+ I E A VTPH RHS+ Sbjct: 239 YLFI------NKNGR-------KLTPRYVQMMIKEYAEKAG-----IKKKVTPHVLRHSF 280 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A H+L G+ ++V+Q L+GH S+S+T++YT V Sbjct: 281 ATHLLKNGVDIRVIQQLLGHSSLSTTQIYTNV 312 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 52/210 (24%) Query: 48 LPKYLLAPEVSALLHYVP--------DLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 LP L +V+ L+ P L + ++ L+ TG RI+EAL L S+ Sbjct: 136 LPHALTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDID--SIDRN 193 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS-------DSWYVSQLQTMV--AQL 150 + +V++ K R E RLVP+ D+W V +MV + Sbjct: 194 HAYVRVVG-KGRKE----------------RLVPIGAPALHAIDAWLVRGRPSMVKRSDK 236 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + R R GR +W+ AAA+ V PHT RHSYA Sbjct: 237 ALFLNARGNRLGRQS---VWKFLH-------------AAAERCGLGDSVGPHTLRHSYAT 280 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 H+L G ++ +Q L+GH S+++T++YT V Sbjct: 281 HLLQGGADIRAVQELLGHASVTTTQIYTAV 310 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 91/184 (49%), Gaps = 46/184 (25%) Query: 67 LHRKMLLATL-WNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 L R + LA L + +G RI+EAL+L D VQL++ R M G Sbjct: 207 LCRDLALAELLYGSGLRISEALSLDVDD---------VQLSSRVLRV---------MGKG 248 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQ---LKIPMER------RNRRTGRTEKARIWEVTDRT 176 + RL PLSD+ + S L+ + + L +P E R R R E ARI E R Sbjct: 249 SR-ERLAPLSDTSF-SCLKAWLEERPLLALPDEAALFVGARGARLNRREAARIVERLCRR 306 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 G+TF+V +PH+ RHS+A H+L AG ++ +Q L+GH+ +++T+ Sbjct: 307 A--------------GLTFTV--SPHSLRHSFATHLLEAGADMRSVQELLGHQRLTTTQR 350 Query: 237 YTKV 240 YT+V Sbjct: 351 YTQV 354 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 26/201 (12%) Query: 44 VHDELPKYLLAPEVSALLHYVPD--LHRK--MLLATLWNTGARINEALALTRGDFSLAPP 99 + +LP +L EV+ LL D L R+ +L L+ TG R+ E L D L Sbjct: 108 IEKKLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLKTSDVDLVSR 167 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 + V K+R RTA L W Q Q + N Sbjct: 168 FVIVCGKGAKERIVPIGRTAAAALERYLADARPRLYSKWRKEQHQFLFI---------NS 218 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 + G +TDR+VR I + +A A + V+PHT RH++A HML G L Sbjct: 219 KGG--------PLTDRSVRRIIDKYIANLAV-----AKKVSPHTIRHTFATHMLNNGADL 265 Query: 220 KVLQSLMGHKSISSTEVYTKV 240 + +Q ++GH ++S+T++YT V Sbjct: 266 RSVQEMLGHVNLSTTQLYTHV 286 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 37/179 (20%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 +L L+++GAR++E + + D S + ++ TLK R + A R+ Sbjct: 140 MLELLYSSGARVSELIGINLNDLS-SIDTSDGKVTTLKLRGKGAK------------ERI 186 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERR----------NRRTGRTEKARIWEVTDRTVRTWI 181 VPL S+ ++ + +++ + + N R R + W++ Sbjct: 187 VPLG-SFATKAVENYLVRVRPDLASKSSKVTSALFLNSRGSRISRQSAWQMV-------- 237 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + AA A G+T V+PH FRHSYA H+L G ++V+Q L+GH S+++T++YT + Sbjct: 238 ---LDAADAAGIT--EHVSPHVFRHSYATHLLNGGADIRVVQELLGHASVTTTQIYTLI 291 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 46/205 (22%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP+ L E+ + L +PD + +L T + TG R++E + L + L Sbjct: 105 LPEVLDPKEIESFLK-IPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDLE---- 159 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM--VAQLKIPMERR-- 157 EK R G+ + R+VPL D + V L+ V L P ++ Sbjct: 160 -----------EKYVRCFGK----GEKERIVPLGD-YAVESLKRYLSVRHLFNPKDKEAL 203 Query: 158 --NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 N++ R + +W + A + + V+PHTFRHS+A H+L Sbjct: 204 FLNKKGERITRQGVW-------------FIIKAYSKILGLPKKVSPHTFRHSFATHLLSN 250 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G ++++Q L+GH I++T++YT + Sbjct: 251 GADIRIVQELLGHSDIATTQIYTHI 275 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 51/207 (24%) Query: 48 LPKYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L EV+ L PDL + +L ++ TG R++E LAL G +LA Y Sbjct: 109 LPKVLSVDEVNRLFE-APDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHYV 167 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-- 159 K+R L+PL + + L+ +++++ + NR Sbjct: 168 IAYGKGAKER-------------------LIPLG-HYAIEYLKEYLSRVRPHFVKENRPC 207 Query: 160 --------RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 TG T + R W++ ++ + G V A + +TPH RHS+A H Sbjct: 208 DDLFLTIRGTGMT-RQRFWQL----IKNY-GLKVHIAKS--------LTPHILRHSFATH 253 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYT 238 ML G L+ +Q L+GH IS+T++YT Sbjct: 254 MLDNGADLRTVQELLGHSDISTTQIYT 280 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 35/199 (17%) Query: 48 LPKYLLAPEVSALLH-----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LPK L EV+ +L+ V L K +L L+ TG R++E + L D L + Sbjct: 106 LPKALTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITLKLSDLHLELGFLQ 165 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER---RNR 159 KQR +P GQ V Y++ + ++ Q P+E +R Sbjct: 166 TIGKGNKQRI---------IPIGQAATNWV----QHYLTYARVVLEQESNPVEYLFLNHR 212 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 G T + W+ + V+ A D V+PHT RHS+A H+L AG L Sbjct: 213 GNGFTRQG-FWKNLKKIVQE------AGVHKD-------VSPHTLRHSFATHILEAGADL 258 Query: 220 KVLQSLMGHKSISSTEVYT 238 +++Q L+GH IS+T++YT Sbjct: 259 RIVQELLGHSDISTTQIYT 277 >UniRef50_UPI0001C37BCF phage-specific recombinase/integrase XerD n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37BCF Length = 342 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 43/183 (23%) Query: 70 KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTH 129 K++LA L++TGAR+ E L D L P + TL + K Sbjct: 153 KVMLAVLYDTGARVQELCDLRIKDVRLESP----AVITLTGKGNKV-------------- 194 Query: 130 RLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG------------RTEKARIWEVTDRTV 177 R VP+ +S Q + LKI +E+ G R +K W V+ Sbjct: 195 RQVPI-----MSGTQKL---LKIYLEKHKGNAGISRGDNPLFVNQRGQKLSRWGVS---- 242 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 I + V A G+ P+T H FRHS A+HM++AGI L ++ +GH ++TE+Y Sbjct: 243 -HIIDKYVDMAKEKGLDVDFPITAHVFRHSKAVHMVHAGINLIYIRDFLGHVDWATTEIY 301 Query: 238 TKV 240 K+ Sbjct: 302 AKI 304 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 52/251 (20%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S SV+H M ++ + + + P +L Q+ LP +L EV LL Sbjct: 68 SNSVVH-----MATSIRNFHEDIEFSTGEENPVSLI--QVRKNETYLPSFLSVEEVKQLL 120 Query: 62 HYV------PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 + +L+R +L ++ G RI+E +LT VQL T Sbjct: 121 NSFTRDDPKQELNR-TILELIYACGLRISELCSLTVAQ---------VQLET------GI 164 Query: 116 ARTAGRMPAGQQTHRLVPLSD------SWYVSQLQTMVAQLKIPMERRNRRTGRTEKARI 169 R G+ G + R+VP+ + +Y++ ++ + Q K N R Sbjct: 165 LRILGK---GNK-ERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNR------ 214 Query: 170 WEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHK 229 +T R+++ + + F +TPH+ RH+YA H+L AG L+++Q L+GH Sbjct: 215 --ITARSIQLLLKQKAMECG-----FQKDITPHSLRHTYATHLLQAGADLRIIQELLGHS 267 Query: 230 SISSTEVYTKV 240 +I +TE+YT V Sbjct: 268 NIKTTEIYTHV 278 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 35/211 (16%) Query: 48 LPKYLLAPEVSALLHYVP-------DLHRKMLLATLWNTGARINE--ALALTRGDFSLAP 98 LP +L EV A L P ++ + +L L+++G R++E L LT DF Sbjct: 108 LPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAVDFD--- 164 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN 158 + R G+ G +T R+VP+ + L+ +A ++ + +N Sbjct: 165 --------------NELLRVVGK---GSKT-RIVPIGKV-ALRTLRRYLADVRPLLAEKN 205 Query: 159 RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 R+ ++ +R WI V AAA + PHT RHS+A H+L G Sbjct: 206 PRSPYVFLSKSGRPLNRE---WIWNVVKVAAARA-GIHKNIHPHTLRHSFASHLLAHGAD 261 Query: 219 LKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+V+Q ++GH IS+TE+YT + + +AA H Sbjct: 262 LRVIQEMLGHADISTTEIYTHIDSNRLAAIH 292 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 29/201 (14%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP L E++ L+ L K LL L+ TGARI+E L+L D + Sbjct: 169 LPDTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDITALEETDG 228 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 + + T K ++ +P G + V Y+ + + + + K N R G Sbjct: 229 ILVLTGKGDKQRI------VPVGSHARQAVDA----YLVRGRPQLNKGKSAALFLNVRGG 278 Query: 163 RT-EKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 + + W+V + AA G+T + +PHT RHS+A H+L G ++ Sbjct: 279 KAMSRQSAWQVVKQ-----------AATEAGITKDI--SPHTLRHSFATHLLEGGADVRS 325 Query: 222 LQSLMGHKSISSTEVYTKVFA 242 +Q L+GH S+++T++YT + A Sbjct: 326 VQELLGHASVTTTQIYTHITA 346 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 46 DELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 + LP L EV LL+ + D + K +L L+ G R++E + L D +L + Sbjct: 107 ENLPDILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINLEDCF 166 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 R+ RLVP + A+ I + + RR Sbjct: 167 L-------------------RIIGKGSKERLVPFGNK----------AKFFISIYLKKRR 197 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVA--------AAAADGVTFSVPVTPHTFRHSYAMHM 212 V D + +G+ ++ A V + +TPHT RHS+A H+ Sbjct: 198 P-------CLNVNDHIFISRLGKKLSRIEFWRQLKNIAKNVGINKNITPHTLRHSFASHL 250 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L G ++ +Q ++GH SI++T++YT + + +H+ Sbjct: 251 LKGGADIRFVQEMLGHASITTTQIYTHLDEDRIVQQHK 288 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 35/198 (17%) Query: 48 LPKYLLAPEVSALLHYVP----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LPK L +V LL + P D K L L+++G R++EA+ + F + V Sbjct: 21 LPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVNLSSFESELSFVKV 80 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG- 162 K+R +P G+ + + W V + + + + +R Sbjct: 81 LGKGKKERM---------LPVGKFAKEAI---EKWLVEREHIAKDTNALFINKYGKRISI 128 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 R + RI+ ++ A G++ PV+PH RHS+A H+L + L+ + Sbjct: 129 RAMQERIYNIS---------------IAQGLS---PVSPHMLRHSFATHILESSGDLRSI 170 Query: 223 QSLMGHKSISSTEVYTKV 240 Q ++GH S+S+T++YTK+ Sbjct: 171 QEMLGHSSLSTTQIYTKL 188 >UniRef50_C9LJA5 Phage-related integrase n=4 Tax=Bacteroidales RepID=C9LJA5_9BACT Length = 341 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 36/200 (18%) Query: 51 YLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 YL + LL +P L L+A L+++GAR+ E + LT D L PY Sbjct: 124 YLSVDGIKLLLSLIPVNTRNGLRDLALIALLYDSGARVQELIDLTPMDLHLVKPYYVSLF 183 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ--LKIPMERR----NR 159 ++R RLVPL + + M A+ LK + + N Sbjct: 184 GKGRKR------------------RLVPLQEQQVELLKKYMEAEGLLKQSLNQHPLFANN 225 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 R + A + + R VR A AD V+PH+ RHS AMH+L AG+ L Sbjct: 226 RGEKLTNAGVTFILMRYVRN-------AHVADPDLVPAKVSPHSLRHSKAMHLLQAGVNL 278 Query: 220 KVLQSLMGHKSISSTEVYTK 239 ++ ++GH SI +TE+Y + Sbjct: 279 VYIRDILGHVSIQTTEIYAR 298 >UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia RepID=XERC_PELTS Length = 306 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 38/204 (18%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP++L E L+ PD + + LL TL+ G RI+E + L GD ++ Y Sbjct: 112 LPRFLYEDEAKELVE-APDTKQPLGMRDRALLETLYAGGLRISELVLLDLGDLDISSGYI 170 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V T K AR RLVPL S V LQ +A+ + P N Sbjct: 171 RV--------TGKRARE-----------RLVPLG-SMAVEALQAYLAKAR-PRLMANSVA 209 Query: 162 GRTEKA-----RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + A R ++ R +R + + V + V+ ++PHT RHS+A H+L AG Sbjct: 210 KKINNALFLNCRGERLSARGIRKILDKYV-----EKVSLERKISPHTLRHSFATHLLNAG 264 Query: 217 IPLKVLQSLMGHKSISSTEVYTKV 240 L+ +Q LMGH +SST+VYT V Sbjct: 265 ADLRSVQELMGHVRLSSTQVYTHV 288 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 54/227 (23%) Query: 14 VPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLL 73 +P V S + S+ ID L LR M+ LL Sbjct: 108 LPTVLSVDEVISILEVIDKSTTLGLRNMA-----------------------------LL 138 Query: 74 ATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVP 133 ++ +G R++E L + D + Y V T K ++ R+VP Sbjct: 139 ELIYGSGLRVSELLNIKLKDIHMQQSYVIV--------TGKGSK-----------ERMVP 179 Query: 134 LSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGV 193 +SD ++ +V R + +T+ I R + + A++ Sbjct: 180 ISDMAIIAIRNYLVKA------RDDLIKEKTDYLFINNQGKTLSRVGFFKVLKKLASEAN 233 Query: 194 TFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 V+PHT RHS+A H+L G+ L+ LQ+L+GH+ IS+T++YT + Sbjct: 234 LDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHI 280 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 28/196 (14%) Query: 51 YLLAP-EVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQ 104 Y+L P EV+ALL +P L + L + +G R E + L G V+ Sbjct: 124 YVLKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDVGSIEFDGERVRVE 183 Query: 105 LATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRT 164 K R +PAG+ + + L T + + + + RR + Sbjct: 184 GKGAKTRI---------VPAGEPALKAIARYLDRARPALATAESDGALFLSKSGRRLSTS 234 Query: 165 EKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQS 224 + R +R W +A + A GV+ PH RHS+A H+L G L+ +Q Sbjct: 235 D-------VRRRLRVWARQAAGVSTAGGVS------PHALRHSFATHLLENGADLRSIQE 281 Query: 225 LMGHKSISSTEVYTKV 240 L+GH SIS+T+VYT+V Sbjct: 282 LLGHASISTTQVYTRV 297 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 32/167 (19%) Query: 76 LWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS 135 ++ TG R++E + L D V R G+ R+VP++ Sbjct: 151 MYGTGVRVSELVGLNLSDIDFGGMRILV-------------RGKGK------KERIVPIA 191 Query: 136 DSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWE----VTDRTVRTWIGEAVAAAAAD 191 D ++ + L + M+ N E I + +TDR+VR + + + A Sbjct: 192 DM----HIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTDRSVRRIVEKYLKIAG-- 245 Query: 192 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + +PH+FRHSYA H+L G L+ +QSL+GH+S+++T+ YT Sbjct: 246 ---LPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYT 289 >UniRef50_C6N6D9 Putative integrase/recombinase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6D9_9GAMM Length = 335 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 38/178 (21%) Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 +LL+TL++TGAR+ E + LT GD L P R G+ G++ R Sbjct: 150 VLLSTLYDTGARVQELIDLTVGDVRLKTP--------------AQVRILGK---GRKI-R 191 Query: 131 LVPLSDSW------YVSQLQTMVAQ-LKIPMERRNR--RTGRTEKARIWEVTDRTVRTWI 181 +VPL D+ Y+ + ++ + P+ R N+ + R I + +R VR Sbjct: 192 VVPLMDNTANLLQSYLHENNLLLPETFDYPLFRNNQGNKLTRVGVNYILQKYERLVR--- 248 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 EA + ++PHT RH+ MH+L G+ L +++ +GH I +TE+Y + Sbjct: 249 -EASPQ-------YKQRISPHTLRHTKGMHLLQGGVSLDIIRDFLGHVDIKTTEIYAR 298 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 47/214 (21%) Query: 48 LPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LP+YL E+ ++ + L L+ +++ G RI+EAL + L + Sbjct: 110 LPQYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEALGIKLSQIDLENEW--- 166 Query: 104 QLATLKQRTEKAARTAGRMPAGQ-QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 MP G+ RLVPL L+ +E T Sbjct: 167 -----------------LMPIGKGNKQRLVPLGSK--------AKENLRAWIEEGRPLTH 201 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVT------FSVPVTPHTFRHSYAMHMLYAG 216 T TD + G+ ++ A + S V+PHTFRHS+A H L AG Sbjct: 202 PT--------TDNIILNAHGKPMSRMGAWKIVQLHTMHLSKQVSPHTFRHSFATHCLEAG 253 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 + L+VLQ L+GH IS+T++YT V + HR Sbjct: 254 MDLRVLQELLGHADISTTQIYTHVDKDFIKQEHR 287 >UniRef50_Q2GDW4 Site-specific recombinase, phage integrase family n=2 Tax=Neorickettsia RepID=Q2GDW4_NEOSM Length = 307 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 52/228 (22%) Query: 46 DELPKYLLAPEVSALLHYVPDLH------RKMLLA-TLWNTGARINEALALTRGDFSLAP 98 + LP+ L E+ L+ L R + L L+ +G RI+EAL+LT Sbjct: 118 NTLPRSLTFKEIIELIEKFSFLKTSWIVKRNIALCYLLYGSGLRISEALSLT-------- 169 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVP-----LSDSWYVSQLQTMVAQLKIP 153 +A L K GR ++ RL+P LSD Q + Sbjct: 170 ------VADLTNSEIKIIGKGGR----ERMIRLLPIVRVALSDYIASCPFQPDAGGF-LF 218 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP--VTPHTFRHSYAMH 211 ++R + RT AR + R F++P +TPH RHS+A H Sbjct: 219 LDRNGNKLCRTAVARAFLSIRRG------------------FNLPDHITPHALRHSFATH 260 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 +L G+ ++ +Q L+GH S++STEVYTK+ A + +++ QF + + D Sbjct: 261 LLQEGVGVRKIQELLGHASLASTEVYTKLNAESLMEKYK-QFCLRDRD 307 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 38/200 (19%) Query: 47 ELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 +LP ++ + LL+ PD L K ++ TL++TG R++E + + D Sbjct: 115 KLPGFMSVNDTEILLNQ-PDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADIDFHSGI 173 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 V+ K+R +P G + L Y+ + + L + N+ Sbjct: 174 VKVRGKGSKERI---------LPVGNHALNAIQL----YLEKRKADNEALFL-----NKF 215 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 GR +T+R+V I + + AA + V+PHTFRHS+A H+L G L+ Sbjct: 216 HGR--------LTERSVARMIEKYMKKAA-----MHLRVSPHTFRHSFATHLLDNGADLR 262 Query: 221 VLQSLMGHKSISSTEVYTKV 240 +Q +GH S+S+T++YT V Sbjct: 263 AVQEFLGHSSLSTTQIYTHV 282 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 31/180 (17%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L + + L+ +G R+ E AL D A + A ++ R K + Sbjct: 189 LRDRAIAEVLYGSGLRVGECCALDLDDIDRA----RLSSALVRVRRGKGGK--------- 235 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIW------EVTDRTVRTW 180 R+VPL + + A L + R+ +TG + A ++ +T R+V+ Sbjct: 236 --ERIVPLG----RQAVAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRM 289 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 IG A TPH RHS+A H+L +G+ L+ +Q L+GH S++ST++YTKV Sbjct: 290 IGRNAQEVGA------YEATPHALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKV 343 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 86/211 (40%), Gaps = 50/211 (23%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +PK L EV+ +L V L + LL L+ TGARI+EA L+ D + Sbjct: 108 IPKALSEDEVARILASVTGVDSFALRDRALLEFLYATGARISEACGLSLSDLDMES---- 163 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS-------DSWYVSQLQTMVAQLKIPME 155 QL L + K R+VP + W + +TM+ + Sbjct: 164 -QLVRLFGKGSK--------------ERIVPFGSHAKAALEEWLGAGGRTMLVSEQWAKR 208 Query: 156 RR------NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 R R + W + + A A D V+PH RHS A Sbjct: 209 DHADAVFLGSRGTRLSRQAAWRIVQKF-------AQIAEVGD------EVSPHVLRHSCA 255 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 HML G L+++Q L+GH S+S+T+VYT+V Sbjct: 256 THMLIHGADLRIVQELLGHASVSTTQVYTRV 286 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 33/178 (18%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L K +L L+ TG R++E L L+R + + + V K+R +P GQ Sbjct: 140 LRDKAMLEFLYATGVRVSELLGLSRLNLHMDDGFVRVFGKGSKERL---------VPVGQ 190 Query: 127 QTHRLVPLSDSW---YVSQLQ-TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + SW Y+ +L+ M++ N R G + W + VR Sbjct: 191 T-------AISWMKRYLDELRPGMMSATSHDTIFLNSRGGPLSRMAAWNI----VRE--- 236 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 AV A P++PHTFRHS+A H+L G L+V+Q ++GH SI +T++YT + Sbjct: 237 HAVIAGIEK------PISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIYTHI 288 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 31/200 (15%) Query: 48 LPKYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +P +L E+ L V D+ + +L L+ TG R++E +L D L+ Sbjct: 110 IPSFLYEEELKELF-TVSDVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDLSMDTV 168 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V KQR +P G H + ++ L+ +LK+ + ++R Sbjct: 169 LVHGKGSKQRY---------VPFGSYAHEAL-------ITYLED--GRLKLKAKGKDRAD 210 Query: 162 GRTE-KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 R +TDR VR + E + A+ ++ + PH RH++A H+L G L+ Sbjct: 211 AYVFLNQRGAPLTDRGVRFILTELMKKASG-----TLHIHPHMLRHTFATHLLNEGADLR 265 Query: 221 VLQSLMGHKSISSTEVYTKV 240 +Q L+GH ++SST+VYT V Sbjct: 266 SVQELLGHSNLSSTQVYTHV 285 >UniRef50_Q9PL53 Tyrosine recombinase xerD n=15 Tax=Chlamydiaceae RepID=XERD_CHLMU Length = 301 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 38/203 (18%) Query: 48 LPKYLLAPEVSALLH----------YVPDLHRKMLLATLWNTGARINEALALTRGDFSLA 97 LP L EV++LL+ Y+ + +L T + TG R++E L GD S Sbjct: 109 LPSILSTEEVNSLLNQPLNTLNLDAYIAN-RDTAILYTFYATGIRVSELCDLCIGDIS-- 165 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 + R G+ G++T RLVP+S + QT+ + L + ER Sbjct: 166 ---------------DDFIRVTGK---GRKT-RLVPIS----IKARQTIDSYLTMFRERF 202 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 ++ E + + R+ + + + A + + ++PH+ RH++A H+L Sbjct: 203 QKKNPSEEHVFLSIRGKKLERSCVWKRITFYAK--LVTTKHISPHSLRHAFATHLLNNQA 260 Query: 218 PLKVLQSLMGHKSISSTEVYTKV 240 L+++Q ++GH ISSTE+YT V Sbjct: 261 DLRIIQEMLGHARISSTEIYTHV 283 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 29/207 (14%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKM------LLATLWNTGARINEALALTRGDFSLAPPY 100 +LP +L E++ LL +PDL ++ LL L++TG R++E + LT L+ Y Sbjct: 110 KLPVFLEEFEMNHLLE-LPDLSTELGQRDRALLEFLYSTGCRVSELVGLTLTRLDLSNRY 168 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 + K+R +P G H + +++ + ++ + ++P Sbjct: 169 ALLLGKGHKERI---------VPLG---HPCIRAMNAYLTGARRVLMEKYEVPSH----- 211 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 R +T R+VR + V A+ V+PHT RH++A H+L G L+ Sbjct: 212 DFIFVNHRGTPLTARSVRRILDRYVEMAS-----IQKHVSPHTIRHTFATHLLDHGADLR 266 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAA 247 +Q L+GH S+S+T++YT V A +A+ Sbjct: 267 SVQELLGHASLSTTQIYTHVTADRIAS 293 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 106/238 (44%), Gaps = 55/238 (23%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV-------PDLHRKM-LLATLWNT 79 V D AALA ++ VH PK L V +H V P+ R + LL L+ + Sbjct: 99 VVEDPCAALANPKLPKVH---PKVL---NVDQAIHLVETEITLDPEGLRDLALLEVLYGS 152 Query: 80 GARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD--- 136 G R++EAL L DF+ V L +K R G+ + RLVPL+ Sbjct: 153 GLRVSEALGL---DFA------HVDL------DQKLVRVLGK----GRKERLVPLTGPAA 193 Query: 137 ---SWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGV 193 + Y+ Q + +R GR + + DR V+ AV + A Sbjct: 194 ERLARYIEQRGAFAPAAREQAVFLGKRGGRLSRKQ----ADRIVKEM---AVRSGA---- 242 Query: 194 TFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 ++PHT RHS+A HML AG L+ +Q L+GH IS+T+ YT LD+A RV Sbjct: 243 --PCSISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTH---LDLAQVMRV 295 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 31/199 (15%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L +V +LL PD L K +L L+ TG R+ E ++LT + SL Sbjct: 131 LPKDLSEEQVDSLLE-APDPNDPIELRDKAMLELLYATGLRVTELVSLTMENISL----- 184 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 + R G+ G++ RLVP+ ++ V ++T + Q + + N Sbjct: 185 ----------RQGVVRVIGK--GGKE--RLVPMGEN-AVDWIETFIEQGRPQLLGDNSSD 229 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 R ++T +T I A D S PH RH++A H+L G L+V Sbjct: 230 VVFPSKRAKQMTRQTFWYRIKHYSVIAGIDTELLS----PHVLRHAFATHLLNYGADLRV 285 Query: 222 LQSLMGHKSISSTEVYTKV 240 +Q L+GH +S+T++YT V Sbjct: 286 VQMLLGHSDLSTTQIYTHV 304 >UniRef50_C7NA28 Integrase family protein n=5 Tax=Leptotrichia RepID=C7NA28_LEPBD Length = 356 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 8/77 (10%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 +T R++R I V A + +TPH FRHS+AM +L G+ ++ LQ LMGH SI Sbjct: 275 LTTRSLRRLISGHVHEAGIEK-----EITPHVFRHSFAMELLNNGVEIQYLQELMGHSSI 329 Query: 232 SSTEVYT---KVFALDV 245 ++T+VYT K F D+ Sbjct: 330 AATQVYTHVNKTFLKDI 346 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 45/204 (22%) Query: 49 PKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 PK + EV+ LL D + + +L L+ TG R++E ++L D +L Sbjct: 115 PKAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDINL------ 168 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 E + GR R VPLS Q V LK+ +ER Sbjct: 169 ---------DESHLKCIGRGKT-----RKVPLS--------QPAVDVLKLYLERSRPLLV 206 Query: 163 RTEKARIWEVTDRTVRT-----W-IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 R + + V R R W I +A A+ A G+ +TPHT RHS+A HM+ G Sbjct: 207 RGQDEQALFVNHRGQRLTRQGFWLILKAYASEA--GIK---GITPHTLRHSFAAHMIDGG 261 Query: 217 IPLKVLQSLMGHKSISSTEVYTKV 240 I L+ +Q +GH SI++T+VY ++ Sbjct: 262 IDLRQVQEWLGHASITTTQVYRQI 285 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 38/204 (18%) Query: 48 LPKYLLAPEVSALLHYVP--DLHR----KMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L EV AL+ D H+ + L+ + +G R++E +AL P Y Sbjct: 107 LPKILSRQEVDALIAAADAKDAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQKDPAYL 166 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V+ T RLVPL+ S A +K ++ R Sbjct: 167 IVK-------------------GKGGTERLVPLNPSAR--------AAIKDYLDIRPLFL 199 Query: 162 GRTEKARIWEVTDRT-----VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +KA + R R +G+ + AA + V+PH RH++A H+L G Sbjct: 200 NAKDKANPYLFCSRGAEGHLTRRRVGQLLDEAALEAGIDPARVSPHVLRHAFATHLLEGG 259 Query: 217 IPLKVLQSLMGHKSISSTEVYTKV 240 L+V+Q+L+GH IS+T+VYT V Sbjct: 260 ADLRVVQTLLGHADISTTQVYTHV 283 >UniRef50_Q6MKT3 Integrase/recombinase XerD n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKT3_BDEBA Length = 292 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 44/205 (21%) Query: 48 LPKYLLAPEVSALLH--YVPDL----HRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L E L VPD ++ L L+ G R++E + L DF+ Sbjct: 97 LPKVLTPQEFQQLFDAAEVPDAVKTARNQLTLLFLYGLGCRVSELIGLNVVDFN------ 150 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW------YVSQLQTMVAQLKIPME 155 +T++ + G+ RLVPL++ Y+ + + + + P Sbjct: 151 ---------QTDRWIKVLGK----GNKERLVPLTEKLAENLTVYLKEHRMALVKENSPSI 197 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 N R R + +W W+ A A F+ PV PH FRH A +L + Sbjct: 198 LINDRGHRPSRVDVWR--------WLAAWSARAG-----FAEPVNPHRFRHGCATALLES 244 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q L+GH SI +T++YT V Sbjct: 245 GADLRSIQMLLGHASIQTTQIYTNV 269 >UniRef50_C2G1Y8 Possible tyrosine recombinase n=3 Tax=Bacteroidetes RepID=C2G1Y8_9SPHI Length = 301 Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 37/201 (18%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LPK+ EV +L +L K +L T+++ G R++E L L D Sbjct: 124 KLPKFFSKEEVRNILDNTQNLKHKAILMTIYSCGLRLSELLNLKIKDI------------ 171 Query: 107 TLKQRTEKAARTAGRMPAGQ-QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTE 165 K++ R+ + R+V L D ++A L+ + + E Sbjct: 172 -------KSSDGIIRIHQSKGNKDRIVSLPDK--------LLATLRHYYQAFKPKEYLFE 216 Query: 166 KARIWEVTDRTVRTWIGEAV--AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 R + ++R+V+ + +A+ A ++G + HT RHSYA H++ +GI +++++ Sbjct: 217 GERGGKYSERSVQLILKKALIKANVQSEG-------SVHTLRHSYATHLIQSGIDIRIVK 269 Query: 224 SLMGHKSISSTEVYTKVFALD 244 L+GH++I +T +YT + +D Sbjct: 270 ELLGHENIKTTMIYTHITDID 290 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 37/199 (18%) Query: 47 ELPKYLLAPEVSALLHY--VPDL---HRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP++L EV LL+ + DL + ++ TL+ TG R++E + + D + + Sbjct: 107 KLPQFLSVDEVMKLLNSPSLDDLIGIRDRAIIETLYATGIRVSELVGMNEEDIN----WN 162 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR--NR 159 + ++ +R ++ + G++T +++ L +L LK P + N Sbjct: 163 YGEIRVFGKRAKERI-----VIVGEETLKILQLYKDHVRPKL------LKKPEKAFFLNA 211 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 + GR ++DR +R I + F+ V+PHT RH++A H+L G L Sbjct: 212 KGGR--------ISDRAIRMIIKKYTK-------DFNKKVSPHTLRHTFATHLLEGGADL 256 Query: 220 KVLQSLMGHKSISSTEVYT 238 + +Q L+GH IS+T++YT Sbjct: 257 RYVQELLGHVRISTTQIYT 275 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 31/195 (15%) Query: 48 LPKYLLAPEVSALLHYVPDLHRK--MLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 LPK L EV +L +P ++ ++ L+ G R++E L + D V+ Sbjct: 96 LPKSLTREEVRKILSVIPPTKKRDRLIFLLLYGAGLRVSELCNLKKSDVDFERSLIIVRG 155 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTE 165 K ++ + G + + DS Y+ I +RR R+ + Sbjct: 156 G--KGAKDRVVPIPAFLLEGIKAYLETRDDDSEYL-----------IVEDRRERKDKLSP 202 Query: 166 KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSL 225 K +W + + G + VTPH RHS+A HML G+ ++ +Q L Sbjct: 203 KT-VWYLLKKY---------------GDRAGIRVTPHMLRHSFATHMLENGVDIRAIQEL 246 Query: 226 MGHKSISSTEVYTKV 240 +GH ++S+T++YTKV Sbjct: 247 LGHSNLSTTQIYTKV 261 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 30/175 (17%) Query: 70 KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTH 129 K +L +++G R++E L D L V+ K+R +P GQ+ Sbjct: 133 KAILELFYSSGIRVSELCGLNLEDLDLKEGLIKVRGKGKKERI---------VPVGQKAK 183 Query: 130 RLVPLSDSWYVSQLQTMVAQLKIPMERR----NRRTGRTEKARIWEVTDRTVRTWIGEAV 185 + Y++ Q + + K+ ++ N R R ++DR VR + Sbjct: 184 EAL----KKYLAIRQILRIKKKLSLDETPLFINNRGQR--------ISDRQVRR-----I 226 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A + + PHT RH++A H+L G L+V+Q L+GH S+S+T++YT V Sbjct: 227 VEKYAKFIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYTHV 281 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 35/203 (17%) Query: 48 LPKYLLAPEVSALL---HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQ 104 LP+ L + +AL+ H D LLA ++ G R++EA+ L D L V Sbjct: 109 LPRTLPPEQTAALMQPTHASADRRDLALLAVMYGAGLRVSEAVGLDLHDIDLHSCELRVL 168 Query: 105 LATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK-IPMERRNRRTGR 163 KQR TA L W +L +V + + + R +R Sbjct: 169 GKGSKQRIVPLPTTA------------ADLLGQWLDERLLGLVRDERAVFLNRFGQR--- 213 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 +T R+V+ + + AD + VTPH RHS+A H+L G+ L+ +Q Sbjct: 214 --------LTARSVQRMLKTRALESGAD-----ISVTPHRLRHSFATHLLAGGVDLRAIQ 260 Query: 224 SLMGHKSISSTEVYTKVFALDVA 246 L+GH S+++TE YT LD+A Sbjct: 261 ELLGHASLATTERYTH---LDIA 280 >UniRef50_A6DT72 Phage integrase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DT72_9BACT Length = 328 Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 41/212 (19%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP L E++ +L YV ++ L +++ G R++EAL + D V+ Sbjct: 100 KLPSVLTQKEIAHVLSYVKRWRHRVCLTAIYSMGLRVSEALKMRPSDIC-------VERK 152 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEK 166 L R K R RLVPL D L + M + R+ Sbjct: 153 ILHIRNSKGCRD-----------RLVPLPD-------------LSLQMINDFWLSHRSPN 188 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV---------TPHTFRHSYAMHMLYAGI 217 ++ D++ I + + A G F + V + H RHSYA HM+ G+ Sbjct: 189 YIFPQIRDKSNMVNIDKHMYIGAVQG-AFRMAVLESGIMKRVSVHNLRHSYATHMMEKGV 247 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 P+ +Q ++GH+ I +T +Y ++ L RH Sbjct: 248 PIMAIQEILGHRDIKTTMIYARLTELIYENRH 279 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 46/206 (22%) Query: 48 LPKYLLAPEVSALLHYVPD--LHRKM----LLATLWNTGARINEALALTRGDFSLAPPYP 101 LP++L +V+ALL +PD HR + +L L+ G R++E + L L Sbjct: 107 LPRFLSQDQVTALLE-MPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDLVAC-- 163 Query: 102 FVQLATLKQRTEKAARTAGRMPAG----QQTHRLVPLSDSWYVSQLQT---MVAQLKIPM 154 FV+L R +P G Q+T + W + + + VA+ PM Sbjct: 164 FVRLFGKGSRERI-------VPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPM 216 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 R+ W++ + A G S+ V+PHT RHS+A H+L Sbjct: 217 TRQG----------FWKLLKKY-------------ALGAGISIKVSPHTLRHSFATHLLE 253 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q+++GH I+ST++YT V Sbjct: 254 GGADLRSVQTMLGHADIASTQIYTHV 279 >UniRef50_A8SVW3 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVW3_9FIRM Length = 306 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 +TD+TVR I + A AA D + +TPH FRH++A +L A + ++ +Q ++GH SI Sbjct: 223 LTDQTVRRMINKYTALAAID-----LHITPHMFRHTFATSLLEADVDIRYIQEMLGHSSI 277 Query: 232 SSTEVYTKV 240 + TE+YT V Sbjct: 278 NITEIYTHV 286 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 46/206 (22%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP+ L A E+ A+L VPD L + LL T++ TG R++E L LA + Sbjct: 113 LPQVLTATEIEAVL-AVPDISTTLGLRNRALLETMYATGFRVSEICNL-----KLADLHD 166 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD-------SWYVSQLQTMVAQLKIPM 154 + L T T G+ GQ+ R+VP+ + ++ ++ + P Sbjct: 167 ELGLIT----------TIGK---GQK-QRIVPIGEMSLLYISKYFKESRPILLKDKESPY 212 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 N R + I+++ + E A D ++PHT RHS+A ++L Sbjct: 213 LFLNDHGHRISRQGIFKL--------VKEIAIKAGIDK-----DISPHTLRHSFATNLLE 259 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G L+++Q L+GH IS+T++YT V Sbjct: 260 NGADLRIVQELLGHSDISTTQIYTHV 285 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 29/203 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHY-VPD----LHRKMLLATLWNTGARINEALALTRGDF 94 +M V + P+ L E LL PD L K +L L+ TG R++E ++L + D Sbjct: 99 EMPKVEKKPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSELISLNKDDV 158 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L +L L+ E+ +P G T + L S L ++ + + P Sbjct: 159 NL-------ELHFLRCTGERGKERI--LPFGGVTAEWLDLYLREGRSHL--ILDERENPA 207 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 NRR GR + W++ ++ + EA G+T + TPHT RHS+A+H+L Sbjct: 208 LFPNRRGGRISRQGFWKL----MKKYGQEA-------GITSDI--TPHTLRHSFAVHLLE 254 Query: 215 AGIPLKVLQSLMGHKSISSTEVY 237 G ++ +Q L+GH S+ ++Y Sbjct: 255 RGADVRSVQELLGHSDASTIQMY 277 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 39/206 (18%) Query: 44 VHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGARINEALALTRGDFSLAP 98 V +LP+ L EV LL + + K +L L+ TG R++E ++L D + Sbjct: 103 VEKKLPQILSTQEVELLLDQPKCLDLKGIRDKAMLELLYATGIRVSELISLNLDDINF-- 160 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQT----HRLVPLSDSWYVSQLQTMVAQLKIPM 154 L +K RT +P G + H + S ++ + Q + + + Sbjct: 161 -----DLGLIKCNKGTRERT---IPIGSISTAAVHEYLEKSRNFLIQDSQEIALFVNVNG 212 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 +R R+ W++ ++ + +A + +TPHT RHS+A H+L Sbjct: 213 KRLTRQG-------FWKI----IKHYKNQA---------KINKDITPHTLRHSFAAHLLE 252 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q ++GH ISST++Y ++ Sbjct: 253 NGADLRSIQEMLGHSDISSTQIYAQI 278 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 40/173 (23%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 +L L++ G R++E +L GD Y R+ RL Sbjct: 143 MLEVLYSCGLRVSELTSLRLGDLFFGEGYI-------------------RVTGKGDKQRL 183 Query: 132 VPLSDSWYVSQLQTMVAQLKIP--MERRNRRTGRTE----KARIWEVTDRTVRTWIGEAV 185 VP+S + A+ KI ++ R +T ++ R ++T V T + EAV Sbjct: 184 VPVSGA----------AREKIQRYLDDRATKTSASDVVFLNNRGTQLTRVMVFTILREAV 233 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 A D ++PHTFRHS+A H+L G ++ +Q ++GH+SI +TE+YT Sbjct: 234 HRAGIDK-----HISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYT 281 >UniRef50_A3XLJ3 Tyrosine type site-specific recombinase n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XLJ3_9FLAO Length = 405 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 44/227 (19%) Query: 26 LPVAIDYPAA-LALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARIN 84 L + +++P A Q +LP L EV LL P+L + +LA L++ G RI Sbjct: 185 LSILLEFPKAHFDGLQRPKKDKKLPVVLSRKEVIDLLRATPNLKHRTILALLYSAGLRIG 244 Query: 85 EALALTRGDFSLAPPYPFVQLAT-LKQRTEKAARTA-----GRMPAGQQTHRLVPLSDSW 138 E LAL L ++ K RT K A+ M + TH L+P D Sbjct: 245 ELLALRCDAIDLDRMQVHIKKGKGRKDRTVKLAQAVVPLLLNYMESYAPTHYLIPGRDG- 303 Query: 139 YVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP 198 G + A +RT++ ++ A Sbjct: 304 ----------------------QGYSAGA---------IRTFLKKSCTRAG-----IKKA 327 Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 VTPHT RHSYA HM+ G+ L+ +Q L+GH +T +YT V D+ Sbjct: 328 VTPHTLRHSYATHMMDHGVALRHIQELLGHAKPETTMIYTHVSQQDL 374 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 45/205 (21%) Query: 47 ELPKYLLAPEVSALLHYV----PDLHR-KMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP L E+ ++ + P+ R + +L T+++ G R++E L + Sbjct: 126 QLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQISQLHFDAGF- 184 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPL-SDSWYVSQLQTMVAQLKIPMERR--- 157 R G+ RLVP+ SD+ + ++ +P+++ Sbjct: 185 --------------IRVVGK----GDKERLVPIGSDAVKYINIYKDEVRVHVPVKKGQED 226 Query: 158 ----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 NRR + I+ V I E AAA D V+PHTFRHS+A H++ Sbjct: 227 ILFLNRRGSALTRVMIFLV--------IKELTAAAGIDK-----QVSPHTFRHSFATHLV 273 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYT 238 G L+ +Q ++GH+SI++TE+YT Sbjct: 274 EGGADLRAVQEMLGHESITTTEIYT 298 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 35/213 (16%) Query: 46 DELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 DE+ K + +P++S+ L Y +++ T+++TG RI+E + L D + Sbjct: 112 DEVEKLINSPDMSSGLGY----RDRIIFETMYSTGMRISELVGLKVLDMDMH-------- 159 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER--RNRRTGR 163 R ++ R VP+ Y S + M L I + + R G Sbjct: 160 -----------REIMKVTGKGSKQRFVPM----YGSLAEKMKTYLDIRHDSLVKERDEGW 204 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 +R + DR W+ + + V+PHT RHS+A H+L G L+ +Q Sbjct: 205 LFLSRNGKKLDREY-VWM---IIKKYCERAGIKKNVSPHTLRHSFATHLLTNGADLRTIQ 260 Query: 224 SLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 L+GH +S+TE YT+V D AR+ + P Sbjct: 261 VLLGHVDLSTTERYTQV--TDNKARNTLLNCHP 291 >UniRef50_C0W4G9 Phage integrase family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4G9_9ACTO Length = 437 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 28/209 (13%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDF 94 L L + +V D++ +L + + LL VPD H K L++TL+ G R EA ALT D Sbjct: 198 GLKLPRDGIVRDKV--FLTPTQFATLLDCVPDAH-KPLVSTLYGLGLRFGEATALTPADL 254 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK--- 151 L P V++ + +K + P +++ R V + S + L+ + K Sbjct: 255 DLDAAQPVVRVTKAWKEGKKGSYLGS--PKTRRSIRTVTVPPS-LIPILREQARKKKPGA 311 Query: 152 --IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 P + T AR+W+ AVAA+ D H RHS+A Sbjct: 312 LLFPNAYGEQITSGAFHARVWQ-----------PAVAASGLDPAPRV-----HDLRHSHA 355 Query: 210 MHMLYAGIPLKVLQSLMGHKSISST-EVY 237 ++ AGIPL V+Q +GH+SI +T +VY Sbjct: 356 SALIAAGIPLPVIQRRLGHESIQTTVDVY 384 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 50/209 (23%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKM------LLATLWNTGARINEALALTRGDFSLAPPYP 101 LP L E++ LL PD+ RK+ +L TL+ TG R++E + L D L Sbjct: 111 LPVALNQKEINDLLAQ-PDIKRKLGLRDRAILETLYATGMRVSELINLELQD--LHEDLG 167 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD---SWYVSQLQTMVAQ---LKIPME 155 V R+ RL+P+S W + Q Q V LK Sbjct: 168 LV-----------------RVLGKGSKERLIPISSVALHW-IKQYQKEVRDPLILKAGQN 209 Query: 156 RR----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 N R + + IW++ ++ + A G+T V TPHT RH++A H Sbjct: 210 DEHIFLNSRAKQLTRQAIWQM----IKKYCQSA-------GITKDV--TPHTLRHTFATH 256 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +L G L+V+Q ++GH IS+T++YT + Sbjct: 257 LLENGADLRVVQEILGHSDISTTQIYTNL 285 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 45/186 (24%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L K LL ++ TG+R++EA + +K AR G+ Sbjct: 149 LRDKALLEFMYATGSRVSEACGVD---------------LDDIDLDDKVARLMGK----G 189 Query: 127 QTHRLVPLSDSWYVSQLQ--------TMVAQLKIPMERR----NRRTGRTEKARIWEVTD 174 RLVP+ S+ L+ + ++ K E R N+R R + +WE+ Sbjct: 190 SKQRLVPVG-SFACEALRRYLRFGRPVLQSKSKGAAEHRAVFLNKRGKRLSRQSVWEI-- 246 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 +RT A + + P+ PHT RHS+A H++ G ++ +Q L+GH S+++T Sbjct: 247 --IRT---------AGERAHITKPLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTT 295 Query: 235 EVYTKV 240 ++YT V Sbjct: 296 QIYTHV 301 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 49/220 (22%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 ID P +L + DE+ + L P+++ L + K++L L+ +G R++E + + Sbjct: 102 IDGPKLPSLLPNILSQDEMLRLLTTPDITNKLGF----RDKVILELLYASGIRVSELIGV 157 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS------WYVSQL 143 DF + + + G+ G++ R +PL S YV ++ Sbjct: 158 HVLDF---------------DQDKGIIKVFGK--GGKE--RYIPLHSSAMKLLIHYVQKI 198 Query: 144 QTMVAQLKIPMERR---NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVT 200 + M P+E+ NR + IW++ R A+ A+ + ++ Sbjct: 199 RPMFT----PIEKFLFLNRSGKGLTRQAIWKIIKRY-------ALLAS------INKSIS 241 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 PHTFRH++A H+L G L+ +Q L+GH +S+TE+YT V Sbjct: 242 PHTFRHTFATHLLEGGADLRSVQLLLGHVDMSATELYTHV 281 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 34/212 (16%) Query: 36 LALRQMSMVHDELPKYLLAPEVSAL---LHYVPD---LHRKMLLATLWNTGARINEALAL 89 + L Q + LP++ E++ L L+ D +MLL L+ TG R++E L Sbjct: 124 MELVQYQVKKKTLPQFFYEQELTQLFDSLYKREDDAAWRDRMLLEVLYATGMRVSELSEL 183 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 + +L VQL R+ R+VPL DS ++ ++ Sbjct: 184 SLERLNLE-----VQLI--------------RVLGKGNKERIVPLGDSA-TQAIRDYLSH 223 Query: 150 LKIPMERRNR-RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 L+ ++R N T+K ++ R +RT + V A ++ + PH RHS+ Sbjct: 224 LRPKIDRNNSPYLLLTDKG--APMSPRQIRTRLKSLVEEQA-----MNLKIYPHKLRHSF 276 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A H+L G L+ +Q L+GH ++SST++YT V Sbjct: 277 ATHLLNKGADLRTVQELLGHANLSSTQIYTHV 308 >UniRef50_P55632 Putative integrase/recombinase y4qK n=15 Tax=Proteobacteria RepID=Y4QK_RHISN Length = 308 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 32/202 (15%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP L EV L V DL +L T + G RI+EA+ L D Sbjct: 115 KLPIILSPDEVQHFLGCVLDLKHHAILTTCYAAGLRISEAVQLKPTDID----------- 163 Query: 107 TLKQRTEKAARTAGRMPAGQ-QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTE 165 + R R+ G+ Q R V LS L+ + ++P + G Sbjct: 164 --------SQRMVVRVEQGKGQKDRYVMLSPKL----LEILRDYWRMPRPKEWLFPGDRA 211 Query: 166 KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSL 225 I R +G+A A A D S PVTPH+ RH++A+H+L AG ++ +Q L Sbjct: 212 GHPI-------TRDAVGQA-CAKAHDLSRLSKPVTPHSLRHAFAVHLLEAGADVRTIQLL 263 Query: 226 MGHKSISSTEVYTKVFALDVAA 247 +GH+S+++T Y ++ V A Sbjct: 264 LGHRSLATTAHYLRIATNKVCA 285 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 58/213 (27%) Query: 47 ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP +L ++ LL P L + +L TL++ G R++E +AL D+ Sbjct: 119 KLPHFLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWD------ 172 Query: 102 FVQLATL-----KQRTEKAARTAGRMPAGQQTHRLV---------PLSDSWYVSQLQTMV 147 Q A + K R E+ A G A TH L P SD+ ++++L+T Sbjct: 173 --QDANIIRVLGKGRKERIA-PIGSFAAKALTHWLEEREAKPGAHPDSDALFLNRLKT-- 227 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 +T R+V + + + D T +PHT RH+ Sbjct: 228 -----------------------RLTSRSVGRMLEKYLLQTGLDKKT-----SPHTLRHT 259 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +A H+L G L+ +Q L+GHKS+++T++YT V Sbjct: 260 FATHLLDGGADLRSVQELLGHKSLTTTQIYTHV 292 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 22/201 (10%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK + ++ LL VPD L + +L L+ TGAR++E L D Sbjct: 231 LPKAVSVEDIQRLL-AVPDRETATGLRNRAILEFLYATGARVSEMLNADIDDVHFE---- 285 Query: 102 FVQLATLKQRTEKAARTAG--RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 TL G R+ RLVP+ S+ +Q + + + + + Sbjct: 286 ----GTLTDEDGNQITLPGYVRLFGKGNKERLVPIG-SYAQKAIQDYLVRARPSLVAHGK 340 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 T W+ + AA+ S +PH+ RHS+A H+L G + Sbjct: 341 GTAAL-FVNGRGGRLGRQGAWL---ILKEAAEAAGLSSDFSPHSMRHSFATHLLQGGADI 396 Query: 220 KVLQSLMGHKSISSTEVYTKV 240 +V+Q L+GH SI++T+VYTKV Sbjct: 397 RVVQELLGHASIATTQVYTKV 417 >UniRef50_Q30SH3 Integron integrase n=2 Tax=Bacteria RepID=Q30SH3_SULDN Length = 320 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 R+ + R + D T+ I +AV + D VT H FRHSYA H+L AGI L+ + Sbjct: 233 RSGERRRHHILDATLSRNIKQAVTKSNIDK-----RVTSHIFRHSYATHLLQAGIDLRSI 287 Query: 223 QSLMGHKSISSTEVYTKV 240 Q L+GHKS+ +T +YT V Sbjct: 288 QELLGHKSVETTMIYTHV 305 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 53/208 (25%) Query: 48 LPKYLLAPEVSALL-------HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 LPK L EV LL +Y+ D+ +L ++ +G R++E + L D + + Sbjct: 108 LPKALEIDEVKRLLSVMLESKYYLRDI---AMLELMYASGLRVSELVRLKLSDINFEAGF 164 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK-IPMERR-- 157 V+ K+R +P Q++ + +++ + +L+ + ++++ Sbjct: 165 IRVKGKGDKERV---------VPIAQRS-----------IDKIKNYLVKLRPVLLKKKAS 204 Query: 158 -----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 N R + R W+ A G V VTPH RHS+A H+ Sbjct: 205 EYVFLNNRGQPMTRQRFWQ---------------NIKAIGRIAGVNVTPHMIRHSFATHL 249 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKV 240 L G L+ LQ ++GH IS+T++YTKV Sbjct: 250 LEGGADLRSLQKMLGHSDISTTQIYTKV 277 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 31/199 (15%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK +L+PE L P L + +LA ++ TG R+ E + L P Sbjct: 127 LPK-VLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTL---------PLN 176 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V+L TE AR G+ R+V L + V+ ++ + + + RRN Sbjct: 177 SVKL------TEGYARCVGK----GNKERMVSL-NPVAVAAVEAYLRHERPVLTRRNT-- 223 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 TE+A + + + + A V S V+PHT RHS+A HM+ G ++ Sbjct: 224 --TEQALFLNRGGKQLSRVMVWNIVKKNAARVGCSKEVSPHTLRHSFATHMMAGGAEIRA 281 Query: 222 LQSLMGHKSISSTEVYTKV 240 LQ L+GH +I +T++YT V Sbjct: 282 LQELLGHANIRTTQIYTHV 300 >UniRef50_A9IB51 Putative integrase/recombinase n=2 Tax=Bordetella petrii DSM 12804 RepID=A9IB51_BORPD Length = 349 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 33/176 (18%) Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 +LL+ L++TGAR+ E + D L P AR G+ G + R Sbjct: 154 VLLSVLYDTGARVQELANMNVSDLKLTAP--------------ATARLLGK---GAKV-R 195 Query: 131 LVPL---SDSWYVSQLQT----MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 LVPL + + VS LQ + Q P+ N R R +A I + + R Sbjct: 196 LVPLLAPTTALLVSYLQEHHGQYLEQKDRPLFCNNVRK-RLTRAGISYILQKYARE---- 250 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + ++PHT RHS AMH+L AG+ L ++ L+GH I +TE+Y + Sbjct: 251 ---VSQGNPGLLGTKISPHTLRHSKAMHLLQAGVNLIYIRDLLGHSDIKTTEIYAR 303 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 TVR W + A A + V PH RHS+A H+L G L+++Q ++GH IS+T+ Sbjct: 237 TVRIW---QIVKACAKNAGLDINVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQ 293 Query: 236 VYTKV 240 +YT V Sbjct: 294 IYTHV 298 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%) Query: 70 KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTH 129 + +L L+ G R++E +AL R D L + V KQR PA + Sbjct: 171 RAVLEVLYGCGLRLSELIALERADVDLVHGFLKVTGKGRKQRIVPLGE-----PAVEALR 225 Query: 130 RLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW--IGEAVAA 187 + + +++ +IP+ER TG E +R++ VT R + + + + + Sbjct: 226 KYFEVRRNFF-----------RIPLER----TG--ESSRVF-VTSRGRQLYPMLVQRMTK 267 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 V+ S PH RHS+A HML G LK + ++GH S+++TE+YT V Sbjct: 268 RYLTPVSESEKKNPHILRHSFATHMLNGGADLKSVSEMLGHSSLTTTELYTHV 320 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 37/191 (19%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L + L+ L+ TGAR++EA+ L D L TE R +G+ Sbjct: 148 LRDRALVEFLYATGARVSEAVGLKFEDIDL---------------TESVVRLSGK----G 188 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARI---WEVTDRTVRTWI-- 181 Q RLVP+ V L+ +A + + R +++ T K+R+ + ++ T + Sbjct: 189 QKQRLVPIG-KCAVRALRDYLANARPILASRAQKSPATAKSRLKSPLNSSSKSANTHVIF 247 Query: 182 ----GEAVA--------AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHK 229 G++++ + A + PHT RHS+A H++ G ++ +Q L+GH Sbjct: 248 LNKRGKSLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISGGADVRTVQELLGHA 307 Query: 230 SISSTEVYTKV 240 S+++T++YT + Sbjct: 308 SVTTTQIYTHI 318 >UniRef50_Q3A4T3 Site-specific recombinase XerD n=24 Tax=root RepID=Q3A4T3_PELCD Length = 333 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 25/49 (51%), Positives = 35/49 (71%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 V HTFRHS+A H+L G+ ++V+Q LMGH + +TE+YT V A D+ A Sbjct: 274 VGCHTFRHSFATHLLENGVNIRVVQELMGHADVKTTEIYTHVMAKDINA 322 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 13/81 (16%) Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 NRR R + +W++ R A D V VTPHT RHS+A HML G Sbjct: 216 NRRGDRLTRQGLWQILKGYAR--------EAGLDDV-----VTPHTLRHSFATHMLSGGA 262 Query: 218 PLKVLQSLMGHKSISSTEVYT 238 L+ +Q L+GH +IS+T++YT Sbjct: 263 DLRSVQELLGHANISTTQIYT 283 >UniRef50_B0SBH2 Tyrosine site-specific recombinase XerC n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBH2_LEPBA Length = 428 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 40/205 (19%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP+ L A E A+ + +P++ KMLL ++ G R++E + L D L Sbjct: 229 KLPEVLSAEETRAIFNSLPNIKHKMLLLISYSAGLRVSEVIHLKTKDIDLE--------- 279 Query: 107 TLKQRTEKAARTAGRMPAGQ-QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTE 165 R R+ G+ + R L++S V +LQ LKI R Sbjct: 280 ----------RNMIRITQGKGKKDRYTILANSL-VFELQEY---LKI------REYNLLL 319 Query: 166 KARIWEVTD----------RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 K EV + + + E + AA + VT H+ RH++A H+L Sbjct: 320 KYSYNEVKNIPWLFPGAGTKPLHIRTAETIFNQAAAKAKITKKVTFHSLRHAFATHLLEL 379 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+++Q+L+GH S+ +T++YTKV Sbjct: 380 GTDLRMIQTLLGHSSVRTTQIYTKV 404 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 39/219 (17%) Query: 48 LPKYLLAPEVSALLHYV----PD----LHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 LPK L + LL PD L + LL L+ TGARI+E + L D L P Sbjct: 131 LPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVDDIDLGPG 190 Query: 100 YPFVQLAT-----LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 + +T + + R+ RLVP+ S+ + L+ + + + + Sbjct: 191 RLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVG-SFALRALEAYLVRGRPVL 249 Query: 155 ERR-------------NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 N R GR + W+V R A A G V+P Sbjct: 250 AAAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARR------AGLPASG------VSP 297 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 HT RHS+A H+L G ++ +Q L+GH S+++T++YT V Sbjct: 298 HTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTLV 336 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 29/207 (14%) Query: 47 ELPKYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 +LP +L E++ LL +PD + +L L++TG R++E + LT L Y Sbjct: 119 KLPVFLEEFEINLLLR-MPDCTTVLGRRDRAILEFLYSTGCRVSELVGLTLTRVDLGNRY 177 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 + K+R +P G H V + + T++ + + P R Sbjct: 178 AILLGKGRKERL---------VPLG---HPCVAAMEDYLRHSRGTLMEKYQAP-----RH 220 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 +R ++ R+VR + + V A V+PHT RH++A H+L G L+ Sbjct: 221 QTVFVNSRGRPLSARSVRRILDKYVEMTA-----LQKHVSPHTIRHTFATHLLDHGADLR 275 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAA 247 +Q L+GH S+S+T++YT V A + A Sbjct: 276 AVQELLGHVSLSTTQIYTHVTAERLTA 302 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 36/202 (17%) Query: 47 ELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP+ + E+ L+ + + +L TL++ G R++E L + + Sbjct: 111 KLPEVMTVEEIDLLIGSIDRSTKEGQRNRAILETLYSCGLRVSELCNLKLSELYFEEGFI 170 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-- 159 V+ KQR LVP+S + ++++ RN Sbjct: 171 KVEGKGSKQR-------------------LVPIS--------PRAIKEIRLYFTDRNLMK 203 Query: 160 -RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 + G + I R + + AA + ++PHTFRHS+A H+L G Sbjct: 204 IKPGFEDFVFISNFGKNISRIMVFHIIKELAAR-IGLKKKISPHTFRHSFATHLLEGGAN 262 Query: 219 LKVLQSLMGHKSISSTEVYTKV 240 L+ +Q ++GH+SI +TE+YT + Sbjct: 263 LRAIQCMLGHESIGTTEIYTHI 284 >UniRef50_B3GAN2 AMDV4_11 n=1 Tax=uncultured virus RepID=B3GAN2_9VIRU Length = 210 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 26/176 (14%) Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 +L+ L+ TGARI+E L + D +L +++ TLKQ +K ++ +R Sbjct: 54 LLVQFLYRTGARIDEVLIVKPSDINLGTNS--IRMKTLKQGKDKNG-------IQREKYR 104 Query: 131 LVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAA 190 ++PL S+L+ Q + M + ++ ++ + V + Sbjct: 105 IIPLH-----SELRDAYMQYLLDMN-----ISTKSEDPLFPMSRQVVDLYF-----KKMQ 149 Query: 191 DGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 D + F V H FRH++A+ + +PL VLQ +GH SI +T +YT++ +D + Sbjct: 150 DKLGFKVHA--HKFRHTFAVKAIMDNVPLNVLQQWLGHSSIFTTSIYTQITGMDTS 203 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 35/201 (17%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEA--LALTRGDFSLAPPY 100 LP +L E+ L +P + K ++ L+ TG R++E LAL + D Sbjct: 111 LPTFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWD------- 163 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 R + R G+ + R VP+ VS +++ + + + + R N Sbjct: 164 ----------RVSETVRVFGK----GRKERYVPVG-KMAVSAVESYIHEARPKLLRANDP 208 Query: 161 TGRTE-KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 T R ++DR++R + + + AA ++PH RHS+A H+L AG L Sbjct: 209 TSHLFLNYRGGALSDRSIRKIVEKRLDEAA-----MQKKISPHAIRHSFATHLLNAGADL 263 Query: 220 KVLQSLMGHKSISSTEVYTKV 240 + +Q L+GH+S+ +T+VYT V Sbjct: 264 RAVQELLGHQSLKTTQVYTHV 284 >UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga lettingae TMO RepID=XERC_THELT Length = 286 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 34/195 (17%) Query: 48 LPKYLLAPEVSALLHYVPDLHRK-MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +P +LL E+ LL + R ++L+ L+ G R++E L D S +P FV++ Sbjct: 108 IPDFLLPSEIQKLLEFSMKNQRDYLMLSLLYFCGLRVSELCNLRVEDLSFSPA--FVKIT 165 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL-KIPMERRNRRTGRTE 165 M G++ R+VPL+ S +L+ + K P + + Sbjct: 166 ---------------MGKGKKD-RIVPLT-SKLAEKLENYITSCGKSPEDYLFGSQIKIH 208 Query: 166 KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSL 225 + ++ R VR + G+ + PHT RH++A H+L G+ ++V+Q L Sbjct: 209 PSTVF----RIVRKY-------TMMCGI--KKRIHPHTLRHTFATHLLQKGVNIRVVQDL 255 Query: 226 MGHKSISSTEVYTKV 240 +GH ++S+T VY V Sbjct: 256 LGHSNLSTTSVYLHV 270 >UniRef50_A0LZY5 Phage integrase family protein n=3 Tax=Bacteria RepID=A0LZY5_GRAFK Length = 385 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 31/198 (15%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 LP L E+ LL +L + +LA ++++G R+ E + L D + ++ A Sbjct: 186 LPTVLSKEEIIDLLRLTRNLKHRCILALIYSSGLRVGELINLHLKDIDIDRKQILIKQA- 244 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKA 167 GR R V L++S+ L + L+ +R G K Sbjct: 245 -----------KGRKD------RYVMLAESF----LPLLYNYLQTYEPKRYFTEGYDNK- 282 Query: 168 RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 227 + + +R+++ ++ A S VTPHT RHS+A HML G L+ +Q L+G Sbjct: 283 ---KYSSSAIRSFLKDSCRRAK-----ISKKVTPHTLRHSFATHMLENGTDLRYIQELLG 334 Query: 228 HKSISSTEVYTKVFALDV 245 H +T +YT V D+ Sbjct: 335 HSKPETTMIYTHVAKKDL 352 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 31/199 (15%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK + +V ALL PD L K +L L+ TG R+ E ++LT + SL Sbjct: 116 LPKDISEEQVDALLD-APDPNDPVELRDKAMLELLYATGLRVTELVSLTMENISL----- 169 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 + R G+ G++ RLVP+ ++ + ++T + Q + + Sbjct: 170 ----------RQGVVRVTGK--GGKE--RLVPMGEN-AIDWIETFIKQGRPALLGETSSD 214 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 R ++T +T I A D + ++PH RH++A H+L G L+V Sbjct: 215 VVFPSKRARQMTRQTFWHRIKFYAVIAGID----TDHLSPHVLRHAFATHLLNYGADLRV 270 Query: 222 LQSLMGHKSISSTEVYTKV 240 +Q L+GH +S+T++YT V Sbjct: 271 VQMLLGHSDLSTTQIYTHV 289 >UniRef50_A5INK7 Phage integrase family protein n=13 Tax=Thermotogaceae RepID=A5INK7_THEP1 Length = 256 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 43/193 (22%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 LPK + E+ ++ K + L NTG R++E + L+ D SL Sbjct: 96 LPKAVELEEIKRIIEACDHRMYKAIFKVLANTGMRVSELVGLSIQDISL----------- 144 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKA 167 AR R+ R++ +S + +V +L R+G EK Sbjct: 145 -----NDTARI--RIKGKGNKERIINVS--------RDLVEELV--------RSGFFEKK 181 Query: 168 RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 227 R V+ + A VTPH FRHS+A+ ++ GIPL +Q+L+G Sbjct: 182 PSVRSIQRAVKRY---------ARKAGIRKKVTPHIFRHSFAVALIERGIPLNKIQALLG 232 Query: 228 HKSISSTEVYTKV 240 H +IS+T +Y K+ Sbjct: 233 HANISTTSIYLKI 245 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 37/200 (18%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP L EV L++ PD + + + L+ +G R++E LT +S+ Y Sbjct: 118 LPDILDIEEVDLLMNQ-PDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTI--YSIDDQYI 174 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ-LKIPMERRNRR 160 V K+R +P G Q V S Y Q + Q L + + R Sbjct: 175 RVYGKGSKERI---------VPIGSQALMAVDQYLSLYRWQWDSEKEQSLFVTL-----R 220 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 ++ IW R+++ + +A G+T ++ +PHT RHS+A H+L G L+ Sbjct: 221 GKSMDRISIW----RSIKEYAQQA-------GITKTI--SPHTLRHSFATHLLNNGADLR 267 Query: 221 VLQSLMGHKSISSTEVYTKV 240 V+Q L+GH +ISST+ YT+V Sbjct: 268 VIQDLLGHANISSTDRYTRV 287 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 43/181 (23%) Query: 70 KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTH 129 + LL L+ TG R +E L D L Y + KQR P Q++ Sbjct: 128 RALLEVLYATGCRASEVSGLRMDDVHLDEGYVKCEGKGSKQRI---------APLAQKSA 178 Query: 130 RLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG----------RTEKARIWEVTDRTVRT 179 R+V +T + + + + ++N R R + IWE+ + Sbjct: 179 RVV-----------KTYLDEERPRLSKKNLRDAAFLFLSRSGKRLSRIAIWELVKKY--- 224 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 AA G+ V+PH+ RHS+A H+L G L+ +Q +MGH SI++T++YT Sbjct: 225 --------AARAGI--DPDVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYTH 274 Query: 240 V 240 V Sbjct: 275 V 275 >UniRef50_Q1MS58 Site-specific recombinase XerC n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MS58_LAWIP Length = 313 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 49/180 (27%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA-ARTAGRMPAGQQTHR 130 LL L+ +G RI+EAL L D RTE R G+ R Sbjct: 149 LLELLYGSGLRISEALCLNVSDI----------------RTEDGFVRVIGK----GNKER 188 Query: 131 LVPLSDSWYVS-----QLQTMVAQLK---IPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 L PLSD+ V+ ++ MVA L + + R +R R + RI E Sbjct: 189 LAPLSDTSIVALEEWLAIRHMVATLGEQALFVGVRGKRLHRRQTIRILE----------- 237 Query: 183 EAVAAAAADGVTFSVPVT--PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 E A +P+T PHT RHS+A H+L G L+ +Q L+GH +S+T+ YT + Sbjct: 238 ELCLQAG-------LPLTTAPHTLRHSFATHLLEGGANLRAVQELLGHARLSTTQRYTHI 290 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 30/202 (14%) Query: 48 LPKYLLAPEVSALLHYVPD-------LHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 LPK L EVS LL L ++ + +G R+ E L G Y Sbjct: 148 LPKTLSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELCGLDLGSVDAGLGY 207 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 V K+R +P G+Q + S Y+ Q + +A RR Sbjct: 208 VRVLGKGGKERI---------VPVGEQALEAI----SRYLKQGRPALA----------RR 244 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 A R + + + + ADG ++PHT RH++A H+L G L+ Sbjct: 245 QREVSPALFLNHRGRRLSVRGAQDILSRIADGAALERGISPHTLRHTFATHLLDGGADLR 304 Query: 221 VLQSLMGHKSISSTEVYTKVFA 242 +Q ++GH +S+T++YT V A Sbjct: 305 SVQEMLGHAKLSTTQIYTHVSA 326 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 48/208 (23%) Query: 47 ELPKYLLAPEVSALLHYVPDLHR------KMLLATLWNTGARINEALALTRGDFSLAPPY 100 +LP L EV ALL PDL++ + +L L+ TG R++E + L + +L + Sbjct: 106 KLPDVLNVDEVLALLE-TPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGF 164 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 R G+ G + R+VPL D+ + L T + ++ + ++ Sbjct: 165 ---------------VRVFGK---GDK-ERIVPLGDA-VIEYLTTYIETIRPQLLKKT-- 202 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAA------ADGVTFSVP--VTPHTFRHSYAMHM 212 VT+ G+ ++ A +GV ++ +TPHT RHS+A H+ Sbjct: 203 -----------VTEVLFLNMHGKPLSRQAIWKMIKQNGVKANIKKTLTPHTLRHSFATHL 251 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKV 240 L G L+ +Q ++GH IS+T++YT V Sbjct: 252 LENGADLRAVQEMLGHSDISTTQLYTHV 279 >UniRef50_C7MB85 Site-specific recombinase XerD n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MB85_BRAFD Length = 332 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 168 RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 227 R + DR VRT + VA A S VTPHT RHS A H++ G L+ +Q +G Sbjct: 249 RGGRLGDRAVRTLVDRHVAEAG-----ISRHVTPHTLRHSAATHLVEGGADLRSVQDFLG 303 Query: 228 HKSISSTEVYTKVFA 242 H S+++T++YT V A Sbjct: 304 HSSLATTQIYTHVSA 318 >UniRef50_C8PTU7 Integron integrase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTU7_9SPIO Length = 426 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 29/215 (13%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP L E + + +P+ + + L+ TG R+ E+L L D V Sbjct: 207 KLPAVLSREETAKIFSLLPENDYGLFIRLLYGTGMRLMESLRLRVQDIDFDKNEITVHCG 266 Query: 107 ------------TLKQRTEKAARTAGRMPAG--QQTHRLVPLSDSW---YVSQLQTMVAQ 149 +LK +K R+ + LVPL + Y + +T Q Sbjct: 267 KGAKDRKTMLPVSLKFPLQKHLENVRRIHEADCKDGFGLVPLPSALAKKYPNAGKTWAWQ 326 Query: 150 LKIPMERR--NRRTGRTEKARIW-EVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 P RR N+ TG + I V RT+ EAV + P+ HTFRH Sbjct: 327 WVFPQARRWQNKETGEQGRHHIDPSVIQRTLH----EAVLRSG-----IPKPIGCHTFRH 377 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 S+A H+L +G ++ +Q L+GH +S+T VYT V Sbjct: 378 SFATHLLESGYDIRTIQELLGHSDVSTTMVYTHVL 412 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 48/206 (23%) Query: 47 ELPKYLLAPEVSALLHYVPDL--HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQ 104 ++P +L E+ LL+ +PDL + ++ ++ G RI E ++L + V Sbjct: 128 KVPSFLTENEMQMLLN-LPDLKPRDRAMIELFYSCGLRIEELVSLDLKNIDFISN---VV 183 Query: 105 LATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW------YVSQLQTMVAQLKIP----M 154 T K+ E R+VP+ D Y+++ + + I + Sbjct: 184 TVTGKRNKE----------------RIVPVGDICLHAIKDYINKRRNLGLPYDIRSPVFL 227 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 R +R G+ RT R + A F+ V+PHT RH++A H+L Sbjct: 228 SDRAKRLGQ-----------RTARRILHRYFVKAG-----FTKKVSPHTLRHTFATHILD 271 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q ++GHK++SST++YT V Sbjct: 272 RGCDLRSVQEMLGHKNLSSTQIYTHV 297 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 38/207 (18%) Query: 44 VHDELPKYLLAPEVSALLHY-----VPD-LHRKMLLATLWNTGARINEALALTRGDFSLA 97 V +LP+ L +V LL P+ + K +L L+ TG R++E +AL D L Sbjct: 103 VDRDLPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVDL- 161 Query: 98 PPYPFVQLATLKQRTE-KAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 +R E + GR+ R++P++ S + + I + Sbjct: 162 ------------ERNEVRCIGKNGRV-------RVLPINGSAATA----LEEYFDISRNQ 198 Query: 157 RNRRTGR-TEKARIWEVTDRTVRT--WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 R +G TE + R R W+ + A+ + S +TPH RHS+A+HML Sbjct: 199 LARGSGSSTEALFLNHRGKRLTRQGFWL---ILKQYAEELGLS-DLTPHVLRHSFAVHML 254 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKV 240 AG L+ +Q L+GH SIS+T++YT + Sbjct: 255 NAGFDLRAVQELLGHTSISTTQIYTHL 281 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 29/197 (14%) Query: 47 ELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP L PE+ +L + + + +L TL++ G R++E L + + Sbjct: 109 KLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCGLRVSELTDLKISNLFFDDGFV 168 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V K+R +P G+ + + + + L + NRR Sbjct: 169 KVLGKGNKERL---------VPIGRDARKYIGMYRNEVRCHLDIVKGAENYVF--LNRRG 217 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 + + ++ + A + V+PHTFRHS+A H++ G L+ Sbjct: 218 NKLSRVMVF-------------TIIKNLAVKIGLKKTVSPHTFRHSFATHLIEGGADLRA 264 Query: 222 LQSLMGHKSISSTEVYT 238 +Q ++GH+SI++TE+YT Sbjct: 265 VQEMLGHESITTTEIYT 281 >UniRef50_UPI000197AE3C hypothetical protein BACCOPRO_01802 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197AE3C Length = 340 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 41/221 (18%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRK------MLLATLWNTGARINE 85 + A L+++Q E+ YL V ALL PDL + +L+ L+++GAR+ E Sbjct: 105 WQAILSIKQKRTPFKEMS-YLTTEGVQALLE-QPDLSTRKGRRDFILMGLLYDSGARVQE 162 Query: 86 ALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQT 145 + LT + L T ++ R+VPLS + Sbjct: 163 IINLTPENIRLGET------------------TTVKLHGKGNKIRVVPLSTN-------- 196 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWE--VTDRTVRTWIGEAVAAAAADGVTFSVPVTP-- 201 V L++ ME N + ++ +R R + + V A + + + P Sbjct: 197 QVKNLRLYMEENNLFASQYRCHPLFPNPKGERLTRMAVLDIVKRHAKNARKQYLELIPSN 256 Query: 202 ---HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 HTFRHS AMHML AGI L ++ +GH S ++TE+Y + Sbjct: 257 ISCHTFRHSKAMHMLEAGINLVYIRDFLGHASTTTTEIYAR 297 >UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA Length = 278 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 38/190 (20%) Query: 49 PKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATL 108 P YL E++ LL D ++++ L+ TG R++E + + + D T+ Sbjct: 108 PVYLTVSEMNDLLDTAIDTRDRIIVRLLYATGVRVSELVNIRKKDIDF-------DRCTI 160 Query: 109 KQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKAR 168 K G+ + L V ++ A L + R Sbjct: 161 K-------------VFGKGAKERIVLVPETVVKEMYDYAASL-------------SNDDR 194 Query: 169 IWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGH 228 ++ +T RTV+ I + A + VTPH RHS+A HML G + +Q L+GH Sbjct: 195 LFNLTPRTVQRDIKQLARRAKINK-----NVTPHKLRHSFATHMLQNGGNVVAIQKLLGH 249 Query: 229 KSISSTEVYT 238 S+++T++YT Sbjct: 250 SSLNTTQIYT 259 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%) Query: 47 ELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP L EV ALL D L K +L L+ TG R++E + L + +L+ Y Sbjct: 103 KLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKLSEVNLSAGY- 161 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS-WYVSQLQTMVAQLKIPMERRN-- 158 L T+ + ++ RLVP+ +S + + + A+ ++ E+ + Sbjct: 162 ---LMTIGKGDKE---------------RLVPMGESACHATGVYLQQARGELLKEKASTL 203 Query: 159 ----RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 R G + W + + A GV S+ +PHT RHS+A H+L Sbjct: 204 LFLSRLGGGMSRQAFWNIIKKR-----------ALQAGVRTSI--SPHTLRHSFATHLLE 250 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q ++GH +SST++YT V Sbjct: 251 NGADLRSVQIMLGHADLSSTQIYTHV 276 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 36/221 (16%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGAR 82 + +D PA L Q + +P L EV A L V + LL L+ TG R Sbjct: 117 ITVDNPAELLATQKAW--QRMPGVLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCR 174 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 +E L D +L KQR +P G + R + L Y+ + Sbjct: 175 ASEVCTLRVRDLTLDEKTLRCHGKGDKQRM---------VPIGGRAIRAIQL----YLEE 221 Query: 143 LQTMVAQLKIPMERRNRRTGRTEK---ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV 199 + ++A +R G+ ++ +R + DR ++ W + A S + Sbjct: 222 SRHILA---------DRNPGQIDELFLSRGGKALDR-IQLW---RLVKRYAKRAGISDEI 268 Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +PH+ RHS+A H+L G L+ +Q ++GH SI +T++YT V Sbjct: 269 SPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIYTHV 309 >UniRef50_B1HMD2 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMD2_LYSSC Length = 280 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 92/199 (46%), Gaps = 32/199 (16%) Query: 44 VHDELPKYLLAPEVSALLHYVPD-LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 V + LP+YL +++ LL +V + L+ + ++ L+ TG RI+E + + + D + + Sbjct: 101 VAETLPRYLSKKQLTCLLEHVCERLYERTIIEVLYATGVRISELVKIKKEDINWSE---- 156 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 + ++ G+ + L + L+T + N RT Sbjct: 157 ---------------RSIQILEGKGNRSRIVLFNLDCAQHLETYL----------NSRTD 191 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 + + + R +R+ + + + F V TPH RH++A H+ G+PL+ + Sbjct: 192 KLPYVFVDKKETRMIRSREINTLFQFYSKQLGFRV--TPHMLRHTFAAHLAERGMPLECI 249 Query: 223 QSLMGHKSISSTEVYTKVF 241 Q L+GH++ ST++Y +++ Sbjct: 250 QQLLGHETTHSTQLYARLY 268 >UniRef50_A2U2P8 Phage integrase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2P8_9FLAO Length = 385 Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 31/199 (15%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP L EV ++ +L + ++A L++ G RI+E + L DF + V+ Sbjct: 188 KLPSVLSQEEVLRIISVTTNLKHRAIIALLYSCGLRISELINLKLKDFHIERKQLIVKSG 247 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEK 166 K R ++ A +PL ++Y S P E E Sbjct: 248 --KGRKDRYVSLA---------ESFMPLLKNYYYSYE---------PKE------FFVEG 281 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLM 226 + + +VR ++ ++ A VTPHT RHSYA H+L G+ ++ +QSL+ Sbjct: 282 MNGEKYSASSVRAFLKKSCKKAGIQRA-----VTPHTLRHSYATHLLENGVDIRYIQSLL 336 Query: 227 GHKSISSTEVYTKVFALDV 245 GH +T +YT V D+ Sbjct: 337 GHSRPETTMIYTHVKRKDL 355 >UniRef50_D1PKU1 Tyrosine recombinase XerC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKU1_9FIRM Length = 359 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 43/203 (21%) Query: 48 LPKYLLAPEVSALLHYV-PDLH-RKMLLATLW-NTGARINEALALTRGDFS-----LAPP 99 LPKYL E LL+ + D + R + TL+ N G R+ E +++ GDF + Sbjct: 144 LPKYLTESESLELLNNIQSDFYERDFCIITLFLNCGMRLAELVSIDLGDFRDDTIRITGK 203 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD--SWYVSQLQTMVAQLKIPMERR 157 +L L ++A ++ G LV LSD + +VS Sbjct: 204 GGKERLVYLNDACKQALERYAKVRGG-----LVNLSDKDALFVS---------------- 242 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 +RTG+ +T R V + + +A G FS PH RH+ A M G+ Sbjct: 243 -KRTGK-------RLTARRVEQIVARCLQSAGLSGRGFS----PHKLRHTAATLMYQGGV 290 Query: 218 PLKVLQSLMGHKSISSTEVYTKV 240 + L+ ++GH+++S+T++YT + Sbjct: 291 DMLALKEILGHENVSTTQIYTHI 313 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 54/212 (25%) Query: 44 VHDELPKYLLAPEVSALLH----YVP-DLHRKMLLATLWNTGARINEALALTRGDFSLAP 98 + +LP+ L EV L+ VP + + +L ++ TG R++E L+L D L P Sbjct: 104 IKRKLPQVLSIEEVDKLMEQPNPVVPLGIRDRAMLELMYGTGIRVSELLSLQVED--LNP 161 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS---W---YVSQLQTMVAQLKI 152 F++ M G++ R++P++ + W Y+++++ + +K Sbjct: 162 TAGFLRC----------------MGKGRK-ERIIPVNQTSIDWVQRYLARVRNSL--VKN 202 Query: 153 PMER------RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 P+ER R R R +I +G V A + VTPHT RH Sbjct: 203 PLERTLFLNARGRPLSRQGFFKI-----------LGNYVEKAELEK-----EVTPHTLRH 246 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 S+A H+L G L+ +Q ++GH IS+T++YT Sbjct: 247 SFATHLLENGADLRAVQEMLGHADISTTQIYT 278 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 73/170 (42%), Gaps = 38/170 (22%) Query: 76 LWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS 135 L+ +G RI+EAL L D L E R G+ R+ PLS Sbjct: 172 LYGSGLRISEALGLDVTDLRL---------------DESVVRVFGKGA----RERMSPLS 212 Query: 136 DSWYVSQLQTMVAQLKIPMERRNRRTGRTEKA-----RIWEVTDRTVRTWIGEAVAAAAA 190 D T V L+ +E+R EKA R + R I A Sbjct: 213 D--------TSVTALRAWLEQRGTLAPEGEKALFVGARGGRLDRREAMRRIERLCRNAGV 264 Query: 191 DGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + PV+PH RHS+A H+L AG L+ +Q L+GH+ +++T+ YT+V Sbjct: 265 E------PVSPHALRHSFATHLLDAGADLRSVQELLGHQRLTTTQRYTRV 308 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 45/203 (22%) Query: 46 DELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 DE+ + L AP + L + + +L + G R++E + ++ D L Sbjct: 131 DEVTRLLAAPGLDERLAF----RDRAMLELAYGAGLRVSEWIGMSVKDVML--------- 177 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR-------- 157 + R G+ RLVP+ S + + + +L+ +ER Sbjct: 178 ------EDSLVRVLGK----GNKERLVPIGRS-AIGAVAVYLRELRPVLERGGGKGILFL 226 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 N R + W++ VR ++G A PV+PHT RHS+A H+L G Sbjct: 227 NGRGAPLSRMGAWKL----VRKYVGMA---------GIEKPVSPHTLRHSFATHLLEGGA 273 Query: 218 PLKVLQSLMGHKSISSTEVYTKV 240 L+ +Q ++GH I++T++YT V Sbjct: 274 DLRAVQEMLGHADIATTQIYTHV 296 >UniRef50_C2DP90 Resolvase n=2 Tax=Escherichia coli RepID=C2DP90_ECOLX Length = 71 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%) Query: 201 PHTFR----HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 PH FR HS+ H+LY + K+L+ MGH+ STEV + FALDVAA ++VQF + Sbjct: 7 PHQFRDLNRHSFGRHLLYGHVHPKILRVRMGHEKYESTEVNLRFFALDVAASYQVQFTLD 66 Query: 257 ESDAV 261 ++A+ Sbjct: 67 TTNAL 71 >UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI00019772C5 Length = 334 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 103/246 (41%), Gaps = 28/246 (11%) Query: 14 VPAVYSAGQPASLPVAIDYPAAL---ALRQMSMVHDELPKYLLA--PEVSALLHYVPDLH 68 +P+V + Q L +D A+L + ++ HDE+P+ A E + V L Sbjct: 108 LPSVLTEAQAERLMDRVDDDASLHAASSQRYETRHDEMPRLDSAHRGEGMSQRDEVVALR 167 Query: 69 RKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQT 128 +L L+ TG R+ E + L GD + V KQR A + AG + Sbjct: 168 DAAMLELLYATGIRVAELVGLDIGDVDWSHRTIRVTGKGSKQRVVPFGDPAEKALAGWKE 227 Query: 129 HRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAA 188 H + L T A L + M R RR + R VR + A + Sbjct: 228 HGRPLILRRAGAGTLDT--AALFLGM--RGRR-----------IDQRIVRDVVHRAARES 272 Query: 189 AADGVTFSVP-VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 VP ++PH+ RHS A HML G L+ +Q ++GH S+ +T+ YT V + Sbjct: 273 G-------VPDISPHSLRHSAATHMLDGGADLREVQEMLGHSSLRTTQRYTHVSIEQLKE 325 Query: 248 RHRVQF 253 R+R F Sbjct: 326 RYRQAF 331 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 47/214 (21%) Query: 40 QMSMVHDELPKYLLAPEVSAL-----LHYVPDLHRKMLLATLWNTGARINEALALTRGDF 94 M ELP L +++ L + V + ++++ L+++G R +E ++L+ Sbjct: 109 NMPKFEKELPTVLTKDDINKLRNVIDISKVTGIRDRLIIEFLYSSGLRSSELVSLSELMI 168 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS---WYVSQLQTMVAQLK 151 +L E+ R G+ G + R+ S++ WY + Sbjct: 169 NLE---------------EREVRVLGK---GNK-ERVTFFSENARKWYEKYISA------ 203 Query: 152 IPMERRNRRTGRT-----EKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 +RN T +R +T R++R I + A + VTPH FRH Sbjct: 204 ----KRNEYKNYTPNIVFVNSRGERITTRSLRRLIADYAEKAGINK-----EVTPHVFRH 254 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 S+A +L + ++ LQ L+GH SIS+T+VYT V Sbjct: 255 SFATTLLNNKVDIRYLQELLGHSSISTTQVYTHV 288 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 41/213 (19%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK EV LL +PD + K +L TL+++G RI+E + D L Sbjct: 109 LPKCFTEEEVRTLLS-IPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDIDLK---- 163 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 R R+ R+VPL S+ + + + +++ R N Sbjct: 164 ---------------RGLVRVTGKGNKQRIVPLG-SYAIEAINNYL-KVRPQFMRENSPD 206 Query: 162 ----GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 ++ KA + D ++ + E VA A +PH+ RHS+A H+L G Sbjct: 207 LLFLTKSGKAFDTKQLDIILKRYF-ELVAKAKG--------YSPHSLRHSFATHLLSRGA 257 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ +Q L+GH +S+TE YT + D+ ++ Sbjct: 258 DLRAIQELLGHSLLSTTETYTHISLEDIKEAYK 290 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 85/211 (40%), Gaps = 48/211 (22%) Query: 44 VHDELPKYLLAPEVSALLHY-VPD----LHRKMLLATLWNTGARINEALALTRGDFSLAP 98 V D LP L EV+ LL D L + L L+ G R +E ++L GD A Sbjct: 113 VPDRLPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDLGDVFFA- 171 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW---YVSQLQTMVAQLKIPME 155 E R G+ R+VP+ S + L+ +L P + Sbjct: 172 --------------EGILRVMGK----GSRERIVPIGGSAQRVLLDYLENGRPKLAKPSK 213 Query: 156 RR-----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHSYA 209 N R GR + + + VRT G T P + PHT RHS+A Sbjct: 214 TDGAVILNARGGRLSRQALHTI----VRTA-----------GATIGRPDLHPHTLRHSFA 258 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 HML G L+ +Q ++GH IS+T++Y V Sbjct: 259 THMLEGGADLRTIQEILGHSDISTTQIYVHV 289 >UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD6_THEPD Length = 295 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 43/198 (21%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 LP+YL A EV +++ +L K+++ L+ TG R++E ++L D Sbjct: 110 LPRYLEAEEVFRMVNAAENLRDKLIVLLLFTTGLRVSELVSLRVSD------------VD 157 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL-----QTMVAQLKIPMERRNRRTG 162 L++RT R+ RLV D YV+ L + + ++ P E Sbjct: 158 LEKRT-------LRVRGKGSKERLVYFPD--YVADLLRSYMKGLNSEWLFPSE------- 201 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 T + E V + VTPHT RHS+A L AG+ ++ + Sbjct: 202 ----------TAEHIHYTTVERVLKRLKEKAGIEKKVTPHTLRHSFATLSLAAGLDIREI 251 Query: 223 QSLMGHKSISSTEVYTKV 240 Q L+GH ++++T+VY V Sbjct: 252 QELLGHSNLNTTQVYAHV 269 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 28/197 (14%) Query: 48 LPKYLLAPEVSALLHYVPDLH----RKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 +P+Y+ EV +L P+ H + ++A ++ G R++E +LT D SL P V Sbjct: 113 IPEYISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLESD-PLV 171 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 ++ + K + R+VPL+ + + + P NR Sbjct: 172 RVKSGKGDKD----------------RIVPLTPDAVRIISDYLKHRDRFPDA--NRHIKL 213 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 R +T ++V + V D + PH FRHS A H+L G +K++Q Sbjct: 214 FVGIRGEPITRKSVNKMLQNHVKKIFPDK-----HLHPHIFRHSCATHLLQRGASIKIVQ 268 Query: 224 SLMGHKSISSTEVYTKV 240 ++GH +IS+T +Y + Sbjct: 269 EILGHANISTTSIYLHI 285 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 69 RKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQT 128 + ++ L+ TG RI+E L LT D ++ + V K+R +P G Sbjct: 135 NRCMVELLYATGMRISELLNLTLKDLNIKMGFIKVIGKGNKERM---------IPIGSYV 185 Query: 129 HRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAA 188 ++ + Y ++ L + + +R R E I + Sbjct: 186 GEILEQYINDYRAEFNIKNDSL-LFFNKHGQRLSREEFYSILQ----------------T 228 Query: 189 AADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + + V+PHTFRH++A H+L G L+ +Q L+GH IS+T +YT + Sbjct: 229 IVNSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTTIYTHI 280 >UniRef50_C6LKW3 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LKW3_9FIRM Length = 305 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 50/213 (23%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLA-------------TLWNTGARINEALALTRGDF 94 LP+ +L E+ LL+Y+ D +K +L L+ TGAR+ E + Sbjct: 103 LPRIILREEIEKLLNYMYDCLKKNVLTGYKYQLRDIAVVEVLFATGARVYEISNIREDSV 162 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L R G+ G++ R V +S+S ++ L+ Q + + Sbjct: 163 NLNSG---------------QIRIMGK--GGKE--RYVQISNSSVLAVLRKYYKQNENEI 203 Query: 155 ERR-----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 ++ N R R T++++R+ + + A + +TPH FRHS+A Sbjct: 204 KKSGCFFINNRGNR--------YTEQSIRSMLKKYAKQAG-----IARNITPHMFRHSFA 250 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 +++ G+ + +Q + GH SI +T++Y + A Sbjct: 251 TYLIEEGVDVSCVQQIRGHSSIKTTQIYIHIAA 283 >UniRef50_D2QBI8 Integrase family protein n=2 Tax=Flexibacteraceae RepID=D2QBI8_9SPHI Length = 298 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 35/199 (17%) Query: 48 LPKYLLAPEVSALLHYV--PD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP+Y+ + LL + PD L K++L L+ TG R++E L D +L Sbjct: 107 LPQYVEEKPMEMLLDDIEFPDTFEGLRDKLVLELLYGTGIRLSELTGLKTTDVNLY---- 162 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 EK G+ + HR+VPL+ + ++ Q + E+ + Sbjct: 163 -----------EKTIVVLGK----RNKHRIVPLNQPLF-----ELIQQYNLLKEKE--FS 200 Query: 162 GRTEKARIWEVTDRTVRTW--IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 G+ + A + V+D+ V + + + + VT +PH RH++A H+L G L Sbjct: 201 GQADTAHLI-VSDKGVAAYPVLIQRIVKRHLTLVTTLGTKSPHVLRHTFATHLLNRGADL 259 Query: 220 KVLQSLMGHKSISSTEVYT 238 ++ L+GH S+++T++YT Sbjct: 260 NAIKDLLGHSSLAATQIYT 278 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 49/206 (23%) Query: 48 LPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LP Y ++ LL D + K ++ L+ G R++E +L + Sbjct: 120 LPVYFNMQDIERLLDSFRDSDAEIMDKAIVELLYGCGLRVSECCSL------------ML 167 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER-----RN 158 Q L+Q R G+ G + R+VP M A+ K +E R Sbjct: 168 QQVYLEQ---GFLRVIGK---GNKE-RMVP------------MHARCKKALENYLTKVRK 208 Query: 159 RRTGRTE----KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 +R R+ A+ E+T + + I + + A D ++ H+FRHS+A H+L Sbjct: 209 QRYARSNFVFINAKGQEITRQYIHVMIKKRLLALGLDE-----RLSAHSFRHSFASHLLD 263 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKV 240 G L+V+Q L+GH IS+T++YT V Sbjct: 264 GGADLRVVQELLGHSDISTTQIYTHV 289 >UniRef50_Q7UY32 Integrase n=3 Tax=Rhodopirellula baltica RepID=Q7UY32_RHOBA Length = 292 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 32/183 (17%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L K+LL L+ TG R+ E L DF VQL K+ Sbjct: 10 LRDKLLLTVLYATGLRVAEVARLQWSDFDFDRQQIRVQLGKGKK---------------- 53 Query: 127 QTHRLVPLSDSWY--VSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 R V L+D + QL + RR R ++ RT++ + +A Sbjct: 54 --DRYVMLADDLLPLMRQLWRHTKGVGYLFPSEGRRVDR-------HLSPRTIQRAVKQA 104 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 + VTPH+FRHS+A H++ +G ++ +Q L+GH ++ +T +YTKV + Sbjct: 105 RILSG-----IGKAVTPHSFRHSFATHLIESGTDIRFIQKLLGHTNLETTSLYTKVARMK 159 Query: 245 VAA 247 A Sbjct: 160 ATA 162 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 38/202 (18%) Query: 48 LPKYLLAPEVSALLHYVPDLHR------KMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +PKYL E+ ++ PDL + + ++ L+ +G R++E L GD L Sbjct: 114 IPKYLNLEEIERIIQ-APDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLDL----- 167 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 + RT G+ RLVP V + + + + R Sbjct: 168 ----------EYQVLRTTGK----GNKQRLVP------VGKAAVLAVRAYLESGRPGLLK 207 Query: 162 GRTEKARIWEVTDRT---VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 GR +R VT R R + +AA F +TPH RHS+A H+L G Sbjct: 208 GRA--SRYLFVTARGGCMTRQGFWKLLAAYGRKAGIFH-GLTPHVLRHSFATHLLEGGAD 264 Query: 219 LKVLQSLMGHKSISSTEVYTKV 240 L+ +Q ++GH IS+T++YT V Sbjct: 265 LRSVQVMLGHADISTTQIYTHV 286 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 44/205 (21%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+ L EV LL + L K + ++++G R++E +L D Y Sbjct: 100 LPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGKYL- 158 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD------SWYVSQLQTMVAQLKIPMER 156 ++ + R+VP++D Y+ + ++ + K E Sbjct: 159 ------------------KICGKGKRERIVPINDRALDILQRYIQTSRVIMVKGKKTSEL 200 Query: 157 -RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 N R + + IW++ + EA+ + + + PHT RHS+A H++ Sbjct: 201 FLNFRGDKISRVGIWKI--------VKEAMKKSKIEK-----NIYPHTLRHSFATHLIQH 247 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q ++GH I++TE+YT V Sbjct: 248 GADLRAVQRMLGHSDITTTEIYTHV 272 >UniRef50_C7JEV7 Phage DNA recombinase XerD n=9 Tax=Acetobacteraceae RepID=C7JEV7_ACEP3 Length = 306 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 89/214 (41%), Gaps = 52/214 (24%) Query: 45 HDELPKYLLAPEVSALLHYVPD-------LHRKMLLAT-----LWNTGARINEALALTR- 91 H LP++L EV ALL+ + R+ +LA L+ +G RI+E LAL R Sbjct: 104 HTPLPRFLSESEVLALLNACAEPAGASLAKKRRGILAKAALELLYASGLRISELLALPRK 163 Query: 92 ---GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWY--VSQLQTM 146 GD QR GR RLVPLSDS L + Sbjct: 164 AIAGD----------------QRMIMVRGKGGR-------ERLVPLSDSAREAAQALLEV 200 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 A L+ P R K + DR + T A A ++PH RH Sbjct: 201 DAHLESPFLFPGRDPA---KPMTRQAFDRILHTVAIRAEIDPAR--------LSPHVLRH 249 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 S+A H+L G L+ LQ L+GH I++T++YT V Sbjct: 250 SFATHLLAHGADLRALQMLLGHADIATTQIYTHV 283 >UniRef50_C8JT99 Tyrosine recombinase XerC subunit n=1 Tax=Listeria monocytogenes FSL N3-165 RepID=C8JT99_LISMO Length = 291 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 51/186 (27%) Query: 68 HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQ 127 +++ L L++TG R+ E + L DF R + G + Sbjct: 128 YQEFLFDFLYSTGIRLAEFINLNIYDFDFEN------------------RVITVVGKGNK 169 Query: 128 THRLVPLSDSWYVSQLQTMVAQLK-----IPMERR-------NRRTG-RTEKARIWEVTD 174 R+V ++S QTM++ LK + R+ + TG R + AR++ + Sbjct: 170 -ERIVVYNESL----EQTMLSYLKARQAIMKFHRKSHSYFLIDFNTGQRLKAARVY---N 221 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 +R +G+ V + PH RHS+A H+L G L+ +Q L+GH S+S+T Sbjct: 222 EIIR--VGDIVHR----------KIHPHMLRHSFATHLLENGCDLRYIQELLGHSSVSTT 269 Query: 235 EVYTKV 240 E+YTKV Sbjct: 270 EIYTKV 275 >UniRef50_Q83N36 Integrase/recombinase n=2 Tax=Tropheryma whipplei RepID=Q83N36_TROWT Length = 349 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 23/42 (54%), Positives = 33/42 (78%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 ++PH+ RHS+A HML AG ++ +Q L+GH SI++T VYTKV Sbjct: 291 ISPHSLRHSFATHMLQAGADIRTVQELLGHSSINTTSVYTKV 332 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 56/229 (24%) Query: 36 LALRQMSMVHD------------ELPKYLLAPEVSALLHYVPD------LHRKMLLATLW 77 LALRQ + D +PK L +V ALL PD L + +L ++ Sbjct: 97 LALRQNRISDDPCLKMRSAKQPLRIPKTLSEAQVEALL-AAPDVTTPLGLRDRTMLELMY 155 Query: 78 NTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS 137 +G R+ E + L + + E R G+ G +T RLVP + Sbjct: 156 ASGLRVTELVLLKSIEVGM---------------NEGVLRITGK---GGKT-RLVPFGEE 196 Query: 138 ---W---YVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 191 W Y+ + + ++ +I AR +T + T I + AAA Sbjct: 197 ARVWIERYLKEARPLILDGQID-------DALFVTARGAAMTRQMFWTLIKKHAAAA--- 246 Query: 192 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + P++PHT RH++A H+L G L+V+Q L+GH IS+T++YT V Sbjct: 247 --EINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHV 293 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 45/205 (21%) Query: 49 PKYLLAPEVSALLHYV---PDL--HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 P +L E+ LL + DL K ++ ++ +G R +E + L + F+ Sbjct: 114 PDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDFNQMVLFI 173 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD---SWYVSQLQTMVAQLKIPMERRN-- 158 G + R VP D W + +Q L I E N Sbjct: 174 H------------------GKGNKD-RYVPFHDYAGEWLIKYIQEARENLMIKNEGHNFV 214 Query: 159 --RRTGRTEKAR-IWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + G R + + DR +R + + + PHT RHS+A H+L A Sbjct: 215 FVNKFGNPLTNRGVENIVDRIMRLYDS-------------TKKIHPHTIRHSFATHLLNA 261 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G ++ +Q L+GH+++S+T++YT + Sbjct: 262 GADIRTVQELLGHENLSTTQIYTHI 286 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 51/209 (24%) Query: 48 LPKYLLAPEVSALLH----YVP-DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LPKYL +VS LL+ VP +L K +L L+ TG R+ E ++LT + S+ Sbjct: 108 LPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMSVQ----- 162 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD--SWYVSQ---------LQTMVAQLK 151 + R G+ R+VP+ + +++V Q L + + Sbjct: 163 ----------QGVVRVIGK----GNKERIVPMGEEAAYWVRQFMLYGRPVLLNGQSSDVV 208 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 P +R + T +T R+ +A AD ++PH RH++A H Sbjct: 209 FPSQRAQQMTRQTFWHRVKHYA----------ILADIDADA------LSPHVLRHAFATH 252 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 ++ G L+V+Q L+GH +S+T++YT V Sbjct: 253 LVNHGADLRVVQMLLGHTDLSTTQIYTHV 281 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 53/218 (24%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L +V AL++ PD L + + L+ G R++E L L Sbjct: 119 LPKDLSEQDVEALIN-APDISTTLGLRDRAMFEVLYACGLRVSELLNLR----------- 166 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN--- 158 ++L LKQ R G+ RLVPL + ++ +A+ + + + N Sbjct: 167 -LELINLKQ---GFVRITGK----GNKERLVPLG-QYACDWIEKYLAESRPQLYKSNTDY 217 Query: 159 ----RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + G + W R A ++PHT RH++A H+L Sbjct: 218 LFLTQHGGIMSRQNFWYAIKRY-------------ALQANIQAELSPHTLRHAFATHLLN 264 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 G L+V+Q L+GH +S+T++YT V A+HR+Q Sbjct: 265 HGADLRVVQMLLGHSDLSTTQIYTHV------AQHRMQ 296 >UniRef50_A1B4Z4 Phage integrase family protein n=21 Tax=Alphaproteobacteria RepID=A1B4Z4_PARDP Length = 312 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 29/169 (17%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 +L LW G RI+EAL L D +P + T++ + + R +P ++ Sbjct: 157 VLTLLWGCGLRISEALGLNGAD------WPLREALTIRGKGGRE-RQVPVLPIAREA--- 206 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 191 ++D Y+ +L Q K P+ R R GR I R R +G Sbjct: 207 --IAD--YL-RLCPYPLQAKAPLFR-GARGGRLSPTLISGAM-RQARQVLG--------- 250 Query: 192 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 TPH RHS+A H+L AG L+ +Q L+GH S+S+T+VYT V Sbjct: 251 ---LPPTATPHALRHSFATHLLTAGGDLRTIQELLGHASLSTTQVYTGV 296 >UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadaceae RepID=Q0C629_HYPNA Length = 309 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 19/204 (9%) Query: 47 ELPKYLLAPEVSALLHYVPDLHR-KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 E+P L EV L+ + R K L+ L+ G R E + L G+ L Sbjct: 104 EVPDVLSREEVGRLIEACGNDKRLKCLVELLYGAGLRATELVTLRVGN-----------L 152 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ---LQTMVAQLKIPMERRNRRTG 162 K +A R G+ RL PL + ++ L+ A L R+++ G Sbjct: 153 PRRKAGQWMSADIIIRGKGGKD--RLCPLGRAALIALSEWLEVREASLPDNPLMRSKQEG 210 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 +R E R +G+ + A + S V PH RH+YA H+L G L+V+ Sbjct: 211 FVFPSRGKE--GHLTRRRLGQMLEDLAGEAGLRSERVYPHALRHAYATHLLQGGADLRVV 268 Query: 223 QSLMGHKSISSTEVYTKVFALDVA 246 Q+L+GH I++T++YT V ++A Sbjct: 269 QTLLGHADIATTQIYTHVLTDELA 292 >UniRef50_C6JQF7 Integrase/recombinase n=2 Tax=Fusobacterium RepID=C6JQF7_FUSVA Length = 294 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 5/69 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 ++DR++R + A A G+T ++P++FRH++A+H+L G+ L LQ LMGH +I Sbjct: 219 LSDRSLRRIVDRYAAKA---GIT--REISPYSFRHTFAVHLLAKGMGLNFLQELMGHVTI 273 Query: 232 SSTEVYTKV 240 ST++Y ++ Sbjct: 274 ESTKIYQEI 282 >UniRef50_A3VV31 Integrase/recombinase XerC, putative n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV31_9PROT Length = 315 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 29/185 (15%) Query: 67 LHR-KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 +HR + L A L+ G R++EALAL R D PP V L L K A+ Sbjct: 147 VHRDRALFALLYGAGLRLSEALALDRRDL---PPRG-VSLRVLG----KGAKM------- 191 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT-GRTEKARIWEVTDRTVRTWIGEA 184 R VPL L + ++ ++ R++ G T A R + + + Sbjct: 192 ----RDVPL--------LDVVRTRIDTYLDHRDKAIPGNTAPALFLGAKGRRLSPGVAQR 239 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 + S TPH RH++A H+L AG L+ LQ+L+GH S+ +T+ YT++ A Sbjct: 240 ALRRERATLGLSDDATPHALRHAFATHLLAAGTDLRTLQTLLGHSSLKTTQGYTEIDAGR 299 Query: 245 VAARH 249 + A H Sbjct: 300 LLAVH 304 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 27/185 (14%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 + K +L L+ TGAR++E ++ +L Y + K+R +P G+ Sbjct: 131 IRNKAILELLYATGARVSEVATISLNGINLEYGYIKCKGKGSKERI---------VPLGK 181 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR-TEKARIWEVTDRTVRTWIGEAV 185 + ++ Y++ ++ + + RTGR + IW + Sbjct: 182 KA----SIAIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRENIWLIVKN---------- 227 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A G+T ++ +PH RHS+A H+L G L+ +Q ++GH SIS+T++YT V + Sbjct: 228 -CALKAGITEAI--SPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHVNKQHL 284 Query: 246 AARHR 250 A H+ Sbjct: 285 KAIHQ 289 >UniRef50_C6XMJ6 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XMJ6_HIRBI Length = 318 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 39/184 (21%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 ++A ++ G RI+EAL+LT D AR R+ RL Sbjct: 163 MVALMYGAGLRISEALSLTDADVP--------------------ARDILRIQGKGNKVRL 202 Query: 132 VPL----SDSWYVS-QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVA 186 VPL D+ V + + ++ + P+ R + G+ RI + +R +G Sbjct: 203 VPLIPAVRDALNVYYEKRPFLSDEEGPLFRGVK--GKKLNPRIIQKLIEKLRISMGLPDT 260 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 A TPH RHS+A H+L G L+ +Q+L+GH S+SST++YT V A + Sbjct: 261 A------------TPHALRHSFATHLLANGADLRSIQTLLGHASLSSTQIYTGVEADRLK 308 Query: 247 ARHR 250 A H+ Sbjct: 309 AIHK 312 >UniRef50_B1HME0 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HME0_LYSSC Length = 238 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 35/196 (17%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 +PK+L E+ L K L +++TG RI E + L R D VQ Sbjct: 62 IPKFLSEVEIEHLREACQTTMEKALFEFMYSTGCRIGEVVKLNREDIDFQSNSVIVQGKG 121 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSW---YVSQLQTMVAQLKIPMERRNRRTGRT 164 K+R E T + W Y+ + + L I +RR +R Sbjct: 122 DKER-EVYFNTRCSI---------------WLKRYLDEREDREPCLFI-TDRRPKRRMSI 164 Query: 165 EKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQS 224 + R +I + ++ A+ + PH RHSYA HM+ G P+ V+QS Sbjct: 165 DNLR-----------YIIKRISNRAS----IKKSIHPHQLRHSYATHMINNGAPIDVIQS 209 Query: 225 LMGHKSISSTEVYTKV 240 L+GH+ +T++Y ++ Sbjct: 210 LLGHEKSETTKIYAQL 225 >UniRef50_B0TP43 Integron integrase n=9 Tax=Bacteria RepID=B0TP43_SHEHH Length = 320 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 27/214 (12%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP L EVS +L + + ++++ L+ +G R++E L L D LA V+ Sbjct: 103 QLPIVLSTEEVSEVLCQL-NGRDQLIVQLLYGSGLRVSECLRLRIQDIDLARCSLTVRNG 161 Query: 107 T--LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRT 164 ++T + + A ++PA R + + D+ Y + L +ER+ R Sbjct: 162 KGHKDRQTILSQKCAIKLPAYIDAARAIQIKDNTYC-----IGPSLPNALERKYPNAFRQ 216 Query: 165 EKARIWEV------------TDRTVRTWIGEAVA----AAAADGVTFSVPVTPHTFRHSY 208 W T R + ++V AAA VT HTFRHS+ Sbjct: 217 AG---WMFVFPSTTTSDNPYTKTHCRHHLHQSVIRKALAAAVRKTHIIKRVTCHTFRHSF 273 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A H+L AG ++ +Q L+GH +++T++YT V Sbjct: 274 ATHLLQAGRDIRTIQELLGHNDVNTTQIYTHVLG 307 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 35/52 (67%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 VTPH RHS+A H+L G L+V+Q L+GH +IS+TE+YT V + HR Sbjct: 249 VTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHVSGSRLREVHR 300 >UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW74_9BACT Length = 314 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 43/228 (18%) Query: 47 ELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 LP L E+ LL PD + + +LAT + +G R++E LT +L Sbjct: 106 NLPGVLDEEEILRLLE-APDPKTDEGIRDRAILATFYASGLRVSELAELTLDRLNL---- 160 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM-VAQLKIPMERRNR 159 E+ R G+ GQ+ V+ L + A+LK+ +ER Sbjct: 161 -----------NEEQIRVTGK---GQKER----------VAFLDGLSCARLKLYLERVRP 196 Query: 160 RTGRTEKARIWEVTDRTVRTWIGE-AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 T EK ++ +T T G + A V+PHT RHS+A H+L G+ Sbjct: 197 STNTAEKT-LFLTRRQTGFTRQGLWLLIKGYARQCGIDRSVSPHTLRHSFATHLLSHGMD 255 Query: 219 LKVLQSLMGHKSISSTEVYTKV----FALDVAARHRVQFAMPESDAVA 262 ++ +Q L+GH I +TE+YT V A D+A H + PE D A Sbjct: 256 IRSIQILLGHSDIQTTEIYTHVDIRMLAEDLAKYH-PRGKRPEKDGQA 302 >UniRef50_D1B6D4 Integrase family protein n=3 Tax=Synergistaceae RepID=D1B6D4_THEAS Length = 292 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 52/216 (24%) Query: 48 LPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LP+ + P+V LL P ++++ L+ +G R++E L D + Sbjct: 103 LPRAISYPDVCRLLEEGPSGREAFRDRLVMELLYGSGLRVSELCDLDWDDVDV------- 155 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 E+ R G+ G R+VP S +Q M + R GR Sbjct: 156 --------EERWIRVMGKGSKG----RMVPFG-----SIVQDM-------LRRWGEMVGR 191 Query: 164 TE-----KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 K +T RTV + + A V V+PHT RHS+A H+L G Sbjct: 192 AGPLFPGKRGAERLTQRTV-----HRIVSGCARRVGL-FGVSPHTLRHSFATHLLEGGAS 245 Query: 219 LKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 L+V+Q LMGH+S+ +T+ Y LDV A R++F+ Sbjct: 246 LRVVQELMGHESLVTTQRY-----LDVTA-ERMRFS 275 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 32/41 (78%) Query: 198 PVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 ++PHTFRHS+A H+L G L+ +Q ++GH SI++TE+YT Sbjct: 242 KISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYT 282 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 35/202 (17%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 ++ H+E+ + L P V + +L ++ TG R++E ++LT G + Y Sbjct: 111 TLSHEEMDQLLSQPGVRT----DSAIRDTAMLELMYATGLRVSELISLTTGSINWQVGYL 166 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV---AQLKIPMERRN 158 VQ K+R +P GQ + V Y +++ AQ + ++ Sbjct: 167 VVQGKGNKERI---------VPIGQVAYEHV----RRYFDEVRPKCIRGAQTNVLFLNKS 213 Query: 159 RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 + G T + W++ VR + AV A V PHTFRHS+A H+L G Sbjct: 214 GQ-GMTRQG-FWKL----VRKY---AVKAG------LQKKVHPHTFRHSFASHLLEGGAD 258 Query: 219 LKVLQSLMGHKSISSTEVYTKV 240 L+ +Q ++GH IS+T++YT V Sbjct: 259 LRSVQMMLGHADISTTQIYTHV 280 >UniRef50_C7LZA8 Integrase family protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZA8_ACIFD Length = 299 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 23/42 (54%), Positives = 34/42 (80%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 V+PH RHS A+HM+ AG L+V+Q ++GH S+++TE+YTKV Sbjct: 237 VSPHVLRHSLAVHMVEAGADLRVVQEILGHASLATTELYTKV 278 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 13/85 (15%) Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 NR + +W+V R V A A D ++PHTFRHS+A H+L G Sbjct: 230 NRSGKGLSRQAVWKVVKRHV------AEAGIHKD-------ISPHTFRHSFATHLLEGGA 276 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFA 242 L+ +Q L+GH IS+TE+YT V A Sbjct: 277 DLRSVQLLLGHADISATEIYTHVQA 301 >UniRef50_Q12Q52 Phage integrase n=12 Tax=Gammaproteobacteria RepID=Q12Q52_SHEDO Length = 296 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 28/195 (14%) Query: 46 DELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 + LP L EVS ++ L ++ TL++ G R+ EA++L GD QL Sbjct: 103 NHLPDILTPAEVSMVISLTHKLRYQVCFLTLYSMGLRLGEAVSLQIGDID-------SQL 155 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTE 165 + R K + RL+PL LQ + + R G+ Sbjct: 156 MQVHIRDAKGGKD-----------RLIPLPQR----TLQALRYYWQTHRHPRYLFPGKDG 200 Query: 166 KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSL 225 K + DR I +A+ ++ ++PH RHSYA H+L G+ L+ +Q L Sbjct: 201 KPN--SLMDRGG---IQKAMKKVISE-CHIHKSISPHNLRHSYATHLLEQGLDLRSVQQL 254 Query: 226 MGHKSISSTEVYTKV 240 +GH S+++T YT++ Sbjct: 255 LGHNSLNTTARYTRL 269 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 31/198 (15%) Query: 48 LPKYLLAPEVSALL-----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +P++L E+ L + + L + + ++ G R++EA++L D A Sbjct: 113 IPEFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDFADNILH 172 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 + K+R A + + + D W S + N+R Sbjct: 173 IHGKGDKERLVPFYDLAKELLVSY----IKDVRDVWATSDETALFV---------NQRGK 219 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 + +T R V+ + +AV + V V PH FRHS+A H+L G L+ + Sbjct: 220 K--------LTTRGVQYLMNKAV-----EKCDLHVHVHPHMFRHSFATHLLDNGADLRYV 266 Query: 223 QSLMGHKSISSTEVYTKV 240 Q L+GH S+S+T++Y V Sbjct: 267 QELLGHSSLSTTQIYVHV 284 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 50/212 (23%) Query: 48 LPKYLLAPEVSALLH----YVPD-LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LPK L ++ ALL P+ L + +L ++ G R++E + L Sbjct: 128 LPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLP------------ 175 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPL---SDSW---YVSQLQ-TMVAQLKIPME 155 +A L QR + R G+ G++ RLVPL S W Y+ Q + ++ A IP + Sbjct: 176 --VAMLNQR-QGVLRITGK--GGKE--RLVPLGEESQHWLQRYLEQARPSLAADKPIPAD 228 Query: 156 RR-------NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 N R + + W WI AA G+ + V+PH RHS+ Sbjct: 229 SDGDVPLFINTNLKRLSRQQFWR--------WIKHY---AALVGIAPN-KVSPHVLRHSF 276 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A H+L G L+ LQ L+GH+SIS+T++YT + Sbjct: 277 ATHLLNHGADLRALQMLLGHRSISTTQIYTLI 308 >UniRef50_A4BJZ1 Integron integrase; Phage integrase; Phage integrase N-terminal SAM-like domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJZ1_9GAMM Length = 325 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 38/223 (17%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLA--------- 97 +P L EV+ LL+ + R M + L+ +G R+NE + L D LA Sbjct: 106 NIPTVLSQAEVTDLLNRIRGKLRVMD-SLLYGSGLRVNECVTLRMKDVDLAMKSITIRNG 164 Query: 98 ---------------PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 P V + +Q + + AG + R P ++ Q Sbjct: 165 KGLKARVVPIPERLVGPLQSVMVHRKEQHIQDTLQGAGYVQLPWAFDRKSP--NAAQSIQ 222 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 Q + + + +++++ R R W + T+ + AA+ + VT H Sbjct: 223 WQFLFSSGVLNVDKKSGRKMR------WHCSTSTL-----QKAVKKAAEQAQLTKRVTCH 271 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 T RHS+A H+L G ++ +Q LMGHK +++T +YT + D+ Sbjct: 272 TLRHSFATHLLTTGTDIRTIQQLMGHKDLNTTMIYTHILMTDM 314 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/46 (52%), Positives = 33/46 (71%) Query: 198 PVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 P+TPHT RHS+A H+L G L+ +Q L+GH IS+T++YT V L Sbjct: 239 PITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKL 284 >UniRef50_UPI000196B70A hypothetical protein CATMIT_00140 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B70A Length = 335 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 28/195 (14%) Query: 51 YLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 YL +++ L++ P + ++++ L++TGAR+ E L D +L P V+L Sbjct: 124 YLTEEQMNNLINLPPTDTSTGIRHRIIMCLLYDTGARVQELCDLKIEDINLGNN-PTVKL 182 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ-LQTMVAQLKIPMERRNRRTGRT 164 K ++ R+VP+S + ++Q L+ +++ ++ +N + Sbjct: 183 HG------KGSKI-----------RIVPISKN--MNQILEVYISKFFSDIKLKNEYLIKN 223 Query: 165 EKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQS 224 + + +++ + + + + +F V PH FRHS AMHML IP+ ++ Sbjct: 224 KNNQ--QMSRDGIEYIVQKYATILKNNDPSFPSKVHPHMFRHSKAMHMLAVDIPIVYIRD 281 Query: 225 LMGHKSISSTEVYTK 239 +GH+ IS+T +Y + Sbjct: 282 FLGHEDISTTMIYAR 296 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 2/51 (3%) Query: 190 ADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A G+ S +TPHTFRHS+A H+L G L+ +Q+++GH IS+T++YT V Sbjct: 164 ASGI--SKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYTHV 212 >UniRef50_Q8UC70 Tyrosine recombinase xerC n=18 Tax=Alphaproteobacteria RepID=XERC_AGRT5 Length = 315 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 46/178 (25%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 +L+ L+ G RI+EAL LT DF PP ++ R G+ G +T R+ Sbjct: 159 VLSLLYGCGLRISEALGLTPADF---PP------------GTRSLRITGK---GNKT-RI 199 Query: 132 VPL-------SDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 VPL D++ + A + + R G+ + A + R ++ G Sbjct: 200 VPLLAVVTEAVDTYRKLCPYALAADEPMFL---GARGGKLQPA----IIQREMQKLRG-- 250 Query: 185 VAAAAADGVTFSVP--VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 F +P TPH RHS+A H+L G L+ +Q L+GH S+S+T+VYT V Sbjct: 251 ---------AFGLPENATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGV 299 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Query: 179 TWIGEAVAAAAADGVTFSV--------PVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKS 230 T +G+ A+ + + SV P+TPH RH+YA HML G L+ +Q L+GH Sbjct: 208 TRLGKKTTTASIESMIKSVCIQAGIQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSD 267 Query: 231 ISSTEVYTKV 240 I++T++YT + Sbjct: 268 ITTTQIYTHI 277 >UniRef50_D1VN48 Integrase family protein n=1 Tax=Frankia sp. EuI1c RepID=D1VN48_9ACTO Length = 422 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 44/186 (23%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L LL L+ TGARI+EA+ L + L Q T R+ G Sbjct: 222 LRSAALLELLYGTGARISEAVGLD------------LDDLDLDQATASV-----RLRGGN 264 Query: 127 QTHRLVPLSD------SWYVSQ----LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT 176 R+VPL S Y+S+ L++ + + + +RR GR + W Sbjct: 265 GRDRVVPLGRCAVAALSLYLSRGRPVLESAGSGTAVFL---SRRGGRLSRQSAWSALRAA 321 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 E V +PH RHS+A+H+L G ++V+Q L+GH S+ +T++ Sbjct: 322 AEAAGIEGV--------------SPHVLRHSFALHLLDGGADVRVVQELLGHASVRTTQI 367 Query: 237 YTKVFA 242 YT V A Sbjct: 368 YTLVPA 373 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 51/213 (23%) Query: 46 DELPKYLLAPEVSALLHYVPD--------LHRKMLLATLWNTGARINEALALTRGDFSLA 97 D LP L EV+ ++ + + LL L+ TGARI+EA+ + D L Sbjct: 123 DYLPDVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVGVKFEDIDL- 181 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA----QLKIP 153 E + G+ RLVP+ V L+ + +L + Sbjct: 182 --------------NESVVKLTGK----GSKQRLVPIG-GCAVRALRNYMEKSRPELALK 222 Query: 154 MERR------NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 +R N+R + WE+ + A + P+ PHT RHS Sbjct: 223 GKRELHTIFLNKRGSALSRQSAWEIVTQ-------------AGERAKLDKPLHPHTLRHS 269 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A H++ G ++ +Q L+GH S+++T++YT + Sbjct: 270 LATHLIAGGADVRTVQELLGHASVTTTQIYTHI 302 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L + +L T++ G R++E +LT + L ++ T+ + +K Sbjct: 150 LRNRAILETMYACGLRVSEVCSLTLAELDLNE-----RILTVTGKGDK------------ 192 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT--VRTWIGEA 184 R+VP + +L+T++ + R +R E+ V+ R + + Sbjct: 193 --QRIVP-----FYKRLRTLLTRYL----RDSRALYLKEEHGFVFVSQRGAPITPRAVQL 241 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + A A + P+ PH RHS+A H+L G+ L+ +Q L+GH S+S+T++YT V Sbjct: 242 ILAQAGQDAGLNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHV 297 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 85/224 (37%), Gaps = 29/224 (12%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYV------PDLHRKMLLATLWNTGARINEALAL 89 L Q+ D+LP + E++ L V L +L L+ TG R++E AL Sbjct: 95 FELVQLKKQSDKLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAAL 154 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D + V K+R R A + + P + + + Sbjct: 155 QWSDIDFSMQTILVLGKGNKERYVPFGRYAKEALQNYRKNEWEPFLSKYKQTHNFVFINH 214 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 P +T + + + + A++ +G + PH RHS+A Sbjct: 215 YAKP------------------ITTTGIEYILNQVITASSLNG-----KIHPHMLRHSFA 251 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 +L G L+ +Q L+GH S+S+T++YT V + +R F Sbjct: 252 TALLNNGADLRTVQELLGHSSLSTTQIYTHVTKEKLQESYRKYF 295 >UniRef50_Q2RV24 Tyrosine recombinase XerC subunit n=10 Tax=Alphaproteobacteria RepID=Q2RV24_RHORT Length = 330 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 76/184 (41%), Gaps = 41/184 (22%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 L L+ G R+ EAL L RGD P V T K R E RL Sbjct: 174 LFTLLYGCGLRLGEALDLDRGDL----PSGEVMRITGKGRKE----------------RL 213 Query: 132 VPLSDSWYVSQLQTMVAQLKI------PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAV 185 VPL V L +A P+ +R G+ + + R +R ++G Sbjct: 214 VPLL-PVVVEALADYLAACPFAGGPDDPLFLGSR--GKRLNPGVVQRQMRRLRGFLGLPE 270 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A TPH RHS+A H+L G L+ +Q L+GH S+S+T+ YTKV A + Sbjct: 271 TA------------TPHALRHSFATHLLAQGGDLRTIQELLGHASLSTTQRYTKVDAGTL 318 Query: 246 AARH 249 H Sbjct: 319 VGLH 322 >UniRef50_Q27ZC1 Integrase (Fragment) n=2 Tax=uncultured bacterium RepID=Q27ZC1_9BACT Length = 164 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 + + V W+ AV A VT H RHSYA H+L G+ L+ +Q +GH S+ Sbjct: 100 IMEGAVSKWLKNAVGKAG-----IEKRVTAHVLRHSYATHLLQKGVDLRTIQEALGHSSV 154 Query: 232 SSTEVYTKVF 241 +TE+YT V Sbjct: 155 KTTEIYTHVL 164 >UniRef50_D2LLC2 Integrase family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=D2LLC2_9EURY Length = 270 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 38/63 (60%) Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + AA + VTPHT RHS+A H+L G ++ +Q L+GHK + +T++YT V Sbjct: 201 QLIVKNAARRAKINKNVTPHTLRHSFATHLLEGGADIRYIQQLLGHKHLKTTQIYTHVAN 260 Query: 243 LDV 245 D+ Sbjct: 261 KDI 263 >UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D807_9ACTN Length = 319 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 32/40 (80%) Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 PHT RHSYA HML G+ L+++Q L+GH SIS+T++YT + Sbjct: 261 PHTLRHSYATHMLEGGMNLRIVQELLGHASISTTQLYTHI 300 >UniRef50_Q2NB52 Tyrosine recombinase xerC n=5 Tax=Sphingomonadales RepID=XERC_ERYLH Length = 306 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 23/44 (52%), Positives = 33/44 (75%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 V+PH RH++A H+L G L+VLQ+L+GH IS+T++YT V A Sbjct: 232 VSPHVLRHAFATHLLEGGADLRVLQTLLGHADISTTQIYTHVDA 275 >UniRef50_Q9F567 IntI2 protein n=38 Tax=Bacteria RepID=Q9F567_ECOLX Length = 325 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 38/65 (58%) Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 +A+ AA S VT HTFRHS+A H+L AG ++ +Q L+GH + +T++YT V Sbjct: 247 KALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLG 306 Query: 243 LDVAA 247 A Sbjct: 307 QHFAG 311 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 VT H+ RHS+A HML G L+ LQ ++GHKS+S+T+VYT V +LD Sbjct: 236 VTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHV-SLD 280 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 46/180 (25%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 LL L++ G RI+EA L R D L + L+ R K + R+ Sbjct: 157 LLELLYSAGLRISEACNLDRADVDL-------RGGELRVRHGKGGK-----------QRM 198 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRR-----------TGRTEKARIWEVTDRTVRTW 180 VPL +T VA ++ ++ R R TG+ K R + W Sbjct: 199 VPLG--------RTAVAAIEAWLQARTRAKPQLDPMGPIFTGQLGKRLNSREGQRLLEKW 250 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + VTPH RH++A H+L AG L+ +Q +MGH S+S+T+ YT + Sbjct: 251 RAR---------LDLPESVTPHALRHAFATHLLQAGADLRAIQEMMGHASLSATQKYTHL 301 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 32/201 (15%) Query: 48 LPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +P L E+ LL+ V L + +L +++G R++E + D + Sbjct: 114 IPAVLSVDEIFVLLNLPFPEDVFGLRDRAILELFYSSGIRVSELTGINEEDMDFSQGLIR 173 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLV---PLSDSWYVSQLQTMVAQLKIPMERRNR 159 ++ K+R + PA + R + P S++ VA +P+ NR Sbjct: 174 IRGKGKKERIVPIGQ-----PASEAVQRYMMKKPGSETS-----GKAVATCPVPLFV-NR 222 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 R GR ++ R+V + + V+ + ++PHT RHS+A H++ AG L Sbjct: 223 RQGR--------LSARSVARILSKYVSMSG-----LQKQISPHTLRHSFATHLMDAGADL 269 Query: 220 KVLQSLMGHKSISSTEVYTKV 240 + +Q L+GH+S+S+T+ YT V Sbjct: 270 RSIQELLGHESLSTTQKYTAV 290 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 41/204 (20%) Query: 43 MVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 + HDE+ + L AP+V + + + +L L+ TG R++E ++L D +L Sbjct: 130 LSHDEVDRLLAAPDVRS----AAGIRDRAMLELLYATGLRVSELVSLQLNDVNLETRVLV 185 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR--- 159 + K+R +P G P +D+ + VA+ ++ RR++ Sbjct: 186 ARGKGDKERI---------VPVG------APAADAV---KAYLAVARERLLHGRRSKDLF 227 Query: 160 ---RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 R GR + ++ DR R ++PH RHS+A H+L G Sbjct: 228 VTPRGGRMTRQGFAKILDRCARRA-------------GIRRRISPHKLRHSFATHLLEGG 274 Query: 217 IPLKVLQSLMGHKSISSTEVYTKV 240 L+ +Q ++GH +S+T++YT V Sbjct: 275 ADLRAVQEMLGHADVSTTQIYTHV 298 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 46/204 (22%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +P YL E+ L + + L K + L+++G RI+EA L D L Sbjct: 110 IPDYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDMDLEGMTLT 169 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN---- 158 V+ +QR +P G+++ ++ + Y+ Q + + ++ RN Sbjct: 170 VEGKGGRQRL---------VPFGEKSLDIL----NRYLKQSRPFI------LKSRNCEYL 210 Query: 159 ---RRTGRTEKARIWEVTDRTV-RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 ++ + +W + + + RT I + VTPHT RHS+A H+L Sbjct: 211 FVSKKGSYINRKSVWRLLNHYIKRTSILK--------------KVTPHTLRHSFATHLLE 256 Query: 215 AGIPLKVLQSLMGHKSISSTEVYT 238 LK +Q L+GH I++T++YT Sbjct: 257 NHADLKSVQELLGHIDIATTQIYT 280 >UniRef50_P62590 Integrase/recombinase n=343 Tax=root RepID=INT2_ECOLX Length = 337 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 42/226 (18%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 LP L EV +L ++ HR + L+ TG RI+E L L D T Sbjct: 113 LPVVLTPDEVVRILGFLEGEHR-LFAQLLYGTGMRISEGLQLRVKDLDF-------DHGT 164 Query: 108 LKQRTEKAARTAGRM------PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP--MERRNR 159 + R K ++ M P+ ++ + + +W++ + + +P +ER+ Sbjct: 165 IIVREGKGSKDRALMLPESLAPSLREQ---LSRARAWWLKDQAEGRSGVALPDALERKYP 221 Query: 160 RTG------------------RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 R G R+ R + D+T + AV A G+T P TP Sbjct: 222 RAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQA---GIT--KPATP 276 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 HT RHS+A +L +G ++ +Q L+GH +S+T +YT V + A Sbjct: 277 HTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAG 322 >UniRef50_D0Y3M6 Integrase family protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y3M6_9CAUL Length = 313 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 +T R V + +A AA D V+PH RH++A H+L G L+V+Q+L+GH I Sbjct: 227 LTARRVGQLLDDAAIAAGID----RDKVSPHVLRHAFATHLLEGGADLRVIQTLLGHADI 282 Query: 232 SSTEVYTKVFALDVAARHRVQFAMP 256 ++T++YT V +A H VQ P Sbjct: 283 ATTQIYTHVAGEHLA--HVVQTKHP 305 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 42/205 (20%) Query: 47 ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP + +V+ LL L + L L+ TGARI+E Sbjct: 111 NLPHTMTDSDVNRLLESCDVSTAAGLRDRAFLEFLYATGARISE---------------- 154 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS---WYVSQLQTMVAQLKIPMERRN 158 +ATL+ R+ R+VPL +S W L++ L + Sbjct: 155 ---VATLRLEQVDLQNGTVRLFGKGSKERIVPLYESAIEWLKKYLRSSRPTLLLK----- 206 Query: 159 RRTGRTEKA-----RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 +TGR A R ++ ++R + AA D ++PH RH+YA +L Sbjct: 207 DKTGRVHSALFISVRGNNMSADSLRKVFSSYLTAAGLDS-----SLSPHAMRHTYATELL 261 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYT 238 G L+++Q L+GH+S+S+T+VYT Sbjct: 262 GGGADLRIVQELLGHESLSTTQVYT 286 >UniRef50_C6J732 Integrase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J732_9BACL Length = 326 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%) Query: 162 GRTEKARIWEVTDR------TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 G E R+W D +R I AA GV S HTFRH++A L Sbjct: 213 GTLETDRLWVTLDNHPFYEAGIRVMISRYCIAANIQGVQCSC----HTFRHTFAKKYLMN 268 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G + L+S++GH+ I +TE+Y ++F+ D+ +H Sbjct: 269 GGDVFTLKSILGHERIETTEMYVELFSRDMQIQH 302 >UniRef50_B0TG45 Phage recombinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG45_HELMI Length = 349 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 45/208 (21%) Query: 50 KYLLAPEVSALLHYVPDLHRK------MLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 KY E++ +L+ +PD R MLL+ L+ +GAR E LT D L Sbjct: 126 KYFTKEEIAIILN-MPDTGRAIGKRDVMLLSLLYASGARAQELCDLTLNDIYLGK----- 179 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 E R G+ G + RLV + Q LK +E RN + Sbjct: 180 ---------ETNIRLVGK---GNKA-RLVTIP--------QNCAVMLKNYLESRNLDSS- 217 Query: 164 TEKARIWEV----TDRTVRTWIGEAVAAAAADGVTFSVP-------VTPHTFRHSYAMHM 212 + K R+ + T+ + E + + P TPH+FRHS A+HM Sbjct: 218 SPKDRLKHIFSSQTNEKMSISCVEEIVKKYVIKSKKAYPQLFKRKTYTPHSFRHSIAVHM 277 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKV 240 L G L V+++ +GH SI +T +Y V Sbjct: 278 LECGESLVVIKAFLGHTSIMTTTIYANV 305 >UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase family n=2 Tax=Methanobrevibacter smithii RepID=A5UKA5_METS3 Length = 302 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 47/205 (22%) Query: 49 PKYLLAPEVSALLH-------------YVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 P +L EV LL + L K+++ L+++G R++E + L+ + + Sbjct: 127 PNFLTQKEVKQLLDSITWDENSDSDFRIITKLRDKLIVTLLYSSGLRVSELINLSVDNVN 186 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 QL+ + G+ R++ L +S QL ++ +E Sbjct: 187 FEGK----QLSIV----------------GKNNSRVILLDES--TKQL------IQKYLE 218 Query: 156 RRNRRTGRTEKARIWE-VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 +R +++ + +T R V+ I + + + +TPH RHSYA H+ Sbjct: 219 KRTQKSNYLVVNKSGNPLTPRYVQLMIKKYGNESGIEK-----KITPHILRHSYATHLFE 273 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTK 239 G+ +K++Q L+GH ++S+T++Y++ Sbjct: 274 QGVNIKIIQQLLGHSNLSTTQIYSQ 298 >UniRef50_Q12S88 Tyrosine recombinase XerC n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S88_SHEDO Length = 321 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 31/197 (15%) Query: 48 LPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LPK + +S LL D + + ++ +++G R+ E +L GD L V Sbjct: 129 LPKNIDVDAISHLLAIDGDDPLVIRDRAIMELFYSSGLRLGELASLNYGDIHLGLQEVKV 188 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 K+R R+P G+ + L W+ +L ++ Q P + + R Sbjct: 189 LGKGGKER---------RVPVGKLAMEALAL---WHTQRL--LLVQADEPALFVSNQGKR 234 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 ++ R++ +A A SVPV PH RHS+A HML + L+ +Q Sbjct: 235 --------LSHRSI-----QARMAKWGQNQALSVPVHPHKLRHSFATHMLESSGDLRAVQ 281 Query: 224 SLMGHKSISSTEVYTKV 240 L+GH ++S+T++YT + Sbjct: 282 ELLGHANLSTTQIYTSL 298 >UniRef50_Q39RA3 Integron integrase n=3 Tax=Bacteria RepID=Q39RA3_GEOMG Length = 334 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 I A+ A D + P TPHT RHS+A H+L +G ++ +Q L+GHK + +T +YT V Sbjct: 261 IQRAIRQAVRD-AELAKPATPHTLRHSFATHLLQSGYDIRTVQELLGHKDVQTTMIYTHV 319 Query: 241 F 241 Sbjct: 320 L 320 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 43/205 (20%) Query: 47 ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP EV LL VP L + +L L+ TG R++E L L D Y Sbjct: 107 QLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQFELGY- 165 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD------SWYVSQLQTMVAQLKIPME 155 + + E+A R++P+S Y+ Q + + + Sbjct: 166 ----LQCEGKGERA--------------RIIPVSSVAQSFVERYIQQARNGLGGRETEAL 207 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 N R GR + W++ R + +TPH RHS+A H+L Sbjct: 208 FLNGRGGRLSRQGFWKMIKRRAKL-------------AGIEKEITPHVLRHSFATHLLEN 254 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q ++GH +++T+VYT V Sbjct: 255 GADLRAIQQMLGHADLATTQVYTHV 279 >UniRef50_A0M0R0 Phage integrase family protein n=1 Tax=Gramella forsetii KT0803 RepID=A0M0R0_GRAFK Length = 337 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 33/175 (18%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 LL+ ++TGAR+ E + LT L P P +++ R RL Sbjct: 151 LLSLTYDTGARVQEIIDLTPSRLRLGKP-PVIKIIGKGNRV-----------------RL 192 Query: 132 VPLSDSWYVSQLQTMVAQLKIPME--RRNRRTGRTEKARIWEVTDRTVRTWIGEAV---- 185 VP+ D+ + LK ME R ++ T ++ R I + Sbjct: 193 VPMLDA--------QIIHLKNYMEEHRLDQPTANIHPLFFNSRKEKFTRAGINHILHKYM 244 Query: 186 -AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 A AD + H+FRHS AMH+L AG+ L ++ ++GH S+ +TE+Y + Sbjct: 245 DMARKADNTLIPDKASCHSFRHSKAMHLLQAGVNLVYIRDILGHVSVQTTEIYAR 299 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 35/199 (17%) Query: 46 DELPKYLLAPEVSALLHYV----PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 D LP+ L V+ L+ P + LL ++ G R+ E ++L D Sbjct: 130 DHLPQALTQDAVNRLISAAGTIEPAARNRCLLELAYSAGLRVAELVSLKWSDL------- 182 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 TE+ G+ R+VP W S L AQ P E+ Sbjct: 183 --------DETERWITVMGK----GSKERMVPYG-QWAASALAEWKAQCP-PSEKGWVFP 228 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 G+ K+ +T+RTV + A A G + PHT RH +A HML G +K Sbjct: 229 GKGGKS----LTERTVHRLVEAASQLAGTPGAS------PHTLRHCFATHMLEGGASVKA 278 Query: 222 LQSLMGHKSISSTEVYTKV 240 +Q L+GH+S+ +T+ Y ++ Sbjct: 279 VQELLGHESLLTTQRYLRI 297 >UniRef50_A3EPL4 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EPL4_9BACT Length = 321 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 24/47 (51%), Positives = 34/47 (72%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 VTPHTFRHS A H+L G+ L+ +Q L+GH+S+ +T+ YT V D+ Sbjct: 256 VTPHTFRHSCATHLLDRGMDLRKIQELLGHQSLGTTQKYTHVGLADL 302 >UniRef50_A6DNA4 Integron integrase n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DNA4_9BACT Length = 424 Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 33/46 (71%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 T HT RHS+A H+L G L+ +Q L+GH+ IS+T++YT V +L+ Sbjct: 368 CTVHTLRHSFATHLLERGTDLRTIQELLGHEDISTTQIYTHVLSLN 413 >UniRef50_B1ZI34 Integrase family protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZI34_METPB Length = 229 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 44/184 (23%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 L L TG R++EALALT D A V L LK+R R Sbjct: 81 LCLILAYTGCRLSEALALTHADLDQA--GGIVSLHCLKKRRTGIVRD------------- 125 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT----VRTWIGEAVAA 187 VP+ + V + V L+ P ERR +W T ++T + EA + Sbjct: 126 VPVPEG--VMAILDFVHDLE-PSERR-----------LWPFKRSTAWQRIKTVMREAGVS 171 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL---D 244 A+A +P RH++ +H L +G+PL +LQ +GH S+S+T +Y V + Sbjct: 172 ASA--------ASPKGLRHAFGVHALRSGVPLTLLQRWLGHASLSTTAIYADVLGAEERE 223 Query: 245 VAAR 248 +AAR Sbjct: 224 IAAR 227 >UniRef50_Q6ALR8 Probable site-specific recombinase (XerD-like) n=1 Tax=Desulfotalea psychrophila RepID=Q6ALR8_DESPS Length = 345 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 VT HT RHSYA H+L G L +LQ L+GHK + +TE+YT + +V H VQ Sbjct: 284 VTCHTLRHSYATHLLEQGTHLHLLQKLLGHKDVKTTEIYTHLMKKNV---HDVQ 334 >UniRef50_Q49HK7 Putative integrase/recombinase n=1 Tax=uncultured bacterial symbiont of Discodermia dissoluta RepID=Q49HK7_9BACT Length = 339 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 40/203 (19%) Query: 50 KYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 +YL A E ALL PD + LL ++NTGAR+ E L L D L PF Sbjct: 127 EYLEADEAQALL-AAPDCGTPSGRRDRALLLAMYNTGARVQEILDLRPCDLQLE--RPFQ 183 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER-----RN 158 L K R E R+ PL V+ L+ ++A+ +P++ RN Sbjct: 184 ALLRGKGRKE----------------RICPLMKETAVA-LRALLAERGVPLDSEQPLFRN 226 Query: 159 RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHSYAMHMLYAGI 217 R ++ VR + + AA T + PH RH+ A H L AG+ Sbjct: 227 RHGAPLHRS--------GVRYILHKHCCQAATHAPTLKRKRIHPHVMRHTMASHHLQAGV 278 Query: 218 PLKVLQSLMGHKSISSTEVYTKV 240 + + L+GH S+ + Y V Sbjct: 279 DIVTISHLLGHASVETANRYAVV 301 >UniRef50_Q5UF10 Predicted site-specific recombinase n=1 Tax=uncultured alpha proteobacterium EBAC2C11 RepID=Q5UF10_9PROT Length = 315 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 30/40 (75%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 V+PH RHS+A HML G L+ LQSL+GH IS+T++YT Sbjct: 252 VSPHKLRHSFATHMLNRGADLRSLQSLLGHADISTTQIYT 291 >UniRef50_Q9A437 Tyrosine recombinase xerD n=11 Tax=Alphaproteobacteria RepID=XERD_CAUCR Length = 305 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 +T R V + +A AA D V+PH RH++A H+L G L+V+Q+L+GH I Sbjct: 221 LTPRRVGQLLEDAAIAAGID----RQKVSPHVLRHAFATHLLEGGADLRVIQTLLGHADI 276 Query: 232 SSTEVYTKVFALDVAARHRVQFAMP 256 ++T++YT V +A H VQ P Sbjct: 277 ATTQIYTHVAGEHLA--HIVQTKHP 299 >UniRef50_C3AFM2 Putative uncharacterized protein n=2 Tax=Bacillus RepID=C3AFM2_BACMY Length = 280 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 29/194 (14%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 ++PK+L E+ L + L L++TG RI E + L R D + + V Sbjct: 103 KIPKFLSELEIEHLREACHNSMENALFEFLYSTGCRIGEVVKLNRVDINFSTNSVIVHGK 162 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEK 166 K+R T + L Y+ + L I ERR +R + Sbjct: 163 GDKER-----------EVYFNTRCTIWLKR--YLDERDDEEPCLFIT-ERRPKRRMSIDN 208 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLM 226 R + ++ + PH RHSYA HM+ G PL+V+QSL+ Sbjct: 209 LRF---------------IIKRISNRARIKKSIHPHQLRHSYATHMINNGAPLEVIQSLL 253 Query: 227 GHKSISSTEVYTKV 240 GH+ +T +Y ++ Sbjct: 254 GHEKSETTRIYAQL 267 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 32/198 (16%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP++ E+ AL V +L +++L L+ TG R++E + + + D Sbjct: 106 LPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDFY----- 160 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 A + G + R VP ++ ++ + K P++ N Sbjct: 161 -------------ANGVTVLGKGSKE-RFVPFG-AYCRQSIENYLEHFK-PIQSCNH-DF 203 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 + +T+R VR + + V A GV+ + PH RH++A H+L G L+ + Sbjct: 204 LILNMKGEAITERGVRYVLNDIVKRTA--GVS---EIHPHKLRHTFATHLLNQGADLRTV 258 Query: 223 QSLMGHKSISSTEVYTKV 240 QSL+GH ++S+T YT V Sbjct: 259 QSLLGHVNLSTTGKYTHV 276 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 5/69 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 +TDR +R + + + A + + +TPH RH++A HML G L+ +Q L+GH + Sbjct: 222 LTDRGLRKILAKVIEDA-----SLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDL 276 Query: 232 SSTEVYTKV 240 +T++YT V Sbjct: 277 KATQIYTHV 285 >UniRef50_A8UM85 Tyrosine type site-specific recombinase n=2 Tax=unclassified Flavobacteriales (miscellaneous) RepID=A8UM85_9FLAO Length = 376 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%) Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +G+ V AA + VTPH RHS+A H+L G+ ++ +Q L+GH S +TE+YT V Sbjct: 304 VGQIVKNAAIKA-RIQITVTPHMLRHSFATHLLEDGVDIRQIQVLLGHSSTKTTEIYTHV 362 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 33/42 (78%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 ++PHTFRH++A H+L G L+V+Q ++GH SI+ST+ YT V Sbjct: 234 ISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDRYTHV 275 >UniRef50_Q0AGB8 Integron integrase n=5 Tax=Bacteria RepID=Q0AGB8_NITEC Length = 329 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%) Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A A GVT P TPHT RHS+A H+L AG ++ +Q L+GH +++T +YT V Sbjct: 263 AVLAAGVT--KPATPHTLRHSFATHLLQAGYDIRTVQELLGHSDVATTMIYTHVL 315 >UniRef50_A1SBX6 Phage integrase family protein n=6 Tax=Actinomycetales RepID=A1SBX6_NOCSJ Length = 375 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 38/189 (20%) Query: 69 RKMLLATLWN-TGARINEALALTRGDFSLAPPYPFVQLAT---LKQRTEKAARTAGRMPA 124 R L A+LW G RINE + L GD+ +P +L T L R K +R G Sbjct: 170 RDYLAASLWRRIGLRINETVMLDVGDW-----HP--ELGTHGKLHVRHGKGSRGRG---- 218 Query: 125 GQQTHRLVPLSDS------WYVSQLQTMVAQLK-------IPMERRNRRTGRTEKARIWE 171 R+VP D W+++ ++ +P ERR+ TG + Sbjct: 219 --AKVRIVPAIDEVDALLEWWLTDVRPQFGDDYEDPNAPLLPSERRDPMTGHCTR----- 271 Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 + +RT +GEAV ++ ++PH RH A H+ G+ LK +Q L+GH + Sbjct: 272 IGAEALRTGMGEAVGRWLP---GWTGRLSPHVLRHYCASHLYEQGMTLKAIQELLGHGWL 328 Query: 232 SSTEVYTKV 240 S+T Y V Sbjct: 329 STTTQYIHV 337 >UniRef50_C6Y269 Integrase family protein n=5 Tax=Sphingobacteriales RepID=C6Y269_PEDHD Length = 294 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 48/185 (25%) Query: 65 PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPA 124 P L K ++ TL+ TG R+ E L+L D + E R G+ Sbjct: 129 PSLRDKTVIETLFGTGIRLAELLSLKETDINFY---------------ESTIRVMGK--- 170 Query: 125 GQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTD---------- 174 + R+VP+ +T+ Q ++ ME + + + ++ VTD Sbjct: 171 -RSKERIVPIG--------KTLREQFRVYMELKTLQNFDNKTTMLF-VTDKGAAAYPKLI 220 Query: 175 -RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISS 233 RTV+ ++ V+ +PH RHSYA +L G L ++ L+GH S+++ Sbjct: 221 YRTVQRYLT---------YVSTQDKKSPHVLRHSYATSLLNRGADLNAIKELLGHASLAA 271 Query: 234 TEVYT 238 T+VYT Sbjct: 272 TQVYT 276 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 38/186 (20%) Query: 70 KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTH 129 K +L L+ TG R+ E ++L D + V L ++ R +P G T Sbjct: 134 KAMLELLYATGIRVTELISLNLEDVN-------VNLGYIRCCNNTKERV---IPIG--TL 181 Query: 130 RLVPLSDSWYVSQLQTMVAQLKIPMERR---NRRTGRTEKARIWEVTDRTVRTWIGEAVA 186 L+ L Y++ + A K E+ N GR + W++ ++ + +A Sbjct: 182 SLIALQK--YINYYRD--AFTKDNEEKSLFLNYHGGRLTRQGFWKI----IKVYTKQAAI 233 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 + +TPHT RHS+A H++ G LK +Q ++GH IS+T+VY ++ Sbjct: 234 EKS---------ITPHTLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQL------ 278 Query: 247 ARHRVQ 252 +H+++ Sbjct: 279 TKHKIK 284 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 20/199 (10%) Query: 47 ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP +L E+ LL P L + +L TL++ G R++E + + D L Sbjct: 108 KLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDLDLDEGVV 167 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 ++ K+R A R HR + S VS + ++ + Sbjct: 168 RIRGKGSKERLAPLGSFALRAIKKWLAHRKLA---SISVSSTRKSASKAGHGTPVFTNKF 224 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 G+ +T R+V + + + D + TPHT RH++A H+L G ++ Sbjct: 225 GK-------RLTTRSVARMLEKYLKLTGLD-----LRTTPHTLRHTFATHLLDRGADIRS 272 Query: 222 LQSLMGHKSISSTEVYTKV 240 +Q L+GHKS+ +T++YT V Sbjct: 273 VQELLGHKSLVTTQIYTHV 291 >UniRef50_C9NXY9 Integron integrase IntI2 n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXY9_9VIBR Length = 321 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 I +A++ A A T + VT HTFRHS+A H+L AG ++ +Q L+GH + +T++YT V Sbjct: 247 IRKALSRAVAK-TTINKKVTCHTFRHSFATHLLQAGRDIRSVQELLGHNDVKTTQIYTHV 305 Query: 241 FALDVAA 247 A Sbjct: 306 IGQHYAG 312 >UniRef50_A5V2S7 Phage integrase family protein n=10 Tax=Sphingomonadales RepID=A5V2S7_SPHWW Length = 308 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/43 (58%), Positives = 31/43 (72%) Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 TPH RHS+A H+L G L+ LQ L+GH S+SST+VYT V A Sbjct: 252 TPHALRHSFATHLLGRGADLRSLQELLGHASLSSTQVYTGVDA 294 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 34/42 (80%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 ++PHTFRHS+A H++ G +K +Q ++GH++I++TE+Y ++ Sbjct: 242 ISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIYKRL 283 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 48/205 (23%) Query: 52 LLAPEVSALL-----HYVPDLHR-KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 +L+P V+A L Y P R + LL L+ TG R +E + D + + Sbjct: 126 VLSPTVAARLLDAPQPYDPLFRRDRALLELLYATGCRASEVSVMEVRDLRIEDRFCL--- 182 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSD-------SWYVSQLQTMVAQLKI---PME 155 AR G RLVPL D ++ + + A+ K P Sbjct: 183 ----------ARGKG------SKERLVPLGDPALAAVEAYLEHERPKLAAKSKQGVPPWL 226 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + R R + +IWE+ V+ + A A+ ++PHT RHS+A H+L Sbjct: 227 LLSSRGQRLTRQKIWEL----VKQYALRCGAPAS---------MSPHTLRHSFATHLLSG 273 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKV 240 G L+ +Q L+GH SI +T++YT V Sbjct: 274 GADLRQVQELLGHASIGTTQIYTHV 298 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 32/43 (74%) Query: 198 PVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 VTPH RHS+A H+L G+ ++ +Q L+GH ++S+T++YT V Sbjct: 254 KVTPHILRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTSV 296 >UniRef50_B5JDS6 Integron integrase subfamily, putative n=41 Tax=Bacteria RepID=B5JDS6_9BACT Length = 485 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 34/55 (61%) Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 +A + AA V+ H RHS+A H+L +GI L+ LQ LMGHK I +T+VY Sbjct: 406 QAAISRAASKAEIQKRVSSHALRHSFATHLLDSGINLRTLQELMGHKDIKTTQVY 460 >UniRef50_A6LBW5 Integrase n=33 Tax=Bacteroidales RepID=A6LBW5_PARD8 Length = 311 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 6/86 (6%) Query: 159 RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 RRTG ++ +RT+ + + A + GVT +PVT +T RHS+A + + Sbjct: 211 RRTGEAA----YKEYNRTLSRFNRDLKLLARSTGVT--LPVTSYTIRHSFASFLKEQDVS 264 Query: 219 LKVLQSLMGHKSISSTEVYTKVFALD 244 ++V+ L+GHKSI +T++Y K F+L+ Sbjct: 265 IEVISELLGHKSIKTTQIYLKSFSLE 290 >UniRef50_Q89XW5 Tyrosine recombinase xerD n=10 Tax=Alphaproteobacteria RepID=XERD_BRAJA Length = 318 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 33/42 (78%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 V+PH RH++A H+L+ G L+++Q+L+GH IS+T++YT V Sbjct: 259 VSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHV 300 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 190 ADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A G+ ++PHT RH++A HML G L+ +Q L+GH S+S+T+ YT V Sbjct: 240 ASGIPAFRSISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQKYTHV 290 >UniRef50_A6H1H3 Integrase/recombinase n=2 Tax=Bacteria RepID=A6H1H3_FLAPJ Length = 347 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 30/193 (15%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 LP L E+ +L ++ K +L+ +++ G R +E L L D + Sbjct: 170 LPNVLSKEEIKLILEAHSNIKHKTMLSLIYSCGLRRSELLHLKPTDIDSKRG-----IVI 224 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKA 167 ++Q K R A P LV L + + + ++ + + +IP E + ++ + Sbjct: 225 IRQSKGKKDRIAPLSPKI-----LVMLREYYSNYKPKSWLFEGQIPGETYSEKSLQN--- 276 Query: 168 RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 227 V A + + PV+ H RHSYA H+L +G L+ +Q L+G Sbjct: 277 -----------------VLKQALEKAKIAKPVSLHWLRHSYATHLLESGTDLRYIQELLG 319 Query: 228 HKSISSTEVYTKV 240 H S +TE+YT V Sbjct: 320 HSSTKTTEIYTHV 332 >UniRef50_C1VB02 Site-specific recombinase XerD n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB02_9EURY Length = 310 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 33/214 (15%) Query: 33 PAALALRQM-SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTR 91 PAA+ L ++ +HD P ++H + D K + L TG R+ EAL +TR Sbjct: 106 PAAVVLEEVPKQIHDR-PDCATWENAEKIVHAIDDPRDKTVAVVLAKTGCRVTEALTITR 164 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS--WYVSQLQTMVAQ 149 D L F++L K G+ T ++P+ D + +LQ + Q Sbjct: 165 EDLLLED--GFIRLTNRK--------------GGKTT--VIPVDDETVRMIQRLQ-FIDQ 205 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAA--ADGVT-FSVPVTPHTFRH 206 + RTG ++T +R + EA +G T F TPHTFR Sbjct: 206 NTSEYLFASSRTGN-------QLTRERIRRKVREAAVKTGVMEEGETRFHKKFTPHTFRT 258 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + M G+P +LQ + G + ++YT++ Sbjct: 259 VFTTLMRNQGMPDHILQYIRGDSESETIDIYTRI 292 >UniRef50_C6JH03 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6JH03_9FIRM Length = 312 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 5/68 (7%) Query: 173 TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSIS 232 ++ +VR+ I + + AA D + +TPH FRHS+A +L + + ++ +Q ++GH SI Sbjct: 226 SEESVRSMIVKYLKLAAID-----MHITPHMFRHSFATLLLESDVDIRYIQRMLGHSSIK 280 Query: 233 STEVYTKV 240 +TE+YT V Sbjct: 281 TTEIYTNV 288 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 49/209 (23%) Query: 48 LPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L EV A+L +PD L + +L L+ G RI+E L D Sbjct: 109 LPKVLPVEEVFAILD-MPDVKTVLGLRDRAILELLYGGGLRISELCGLDLLDID------ 161 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD------SWYVSQLQTMVAQLKIPME 155 R+ + R G+ RLVP++ Y+++ ++A ++ Sbjct: 162 ---------RSGRIVRVMGK----GSKERLVPVNAQSIRALEAYLARRGELLATIRKDQA 208 Query: 156 RR----NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 N R GR +T R++ + V A + V+PH RHS+A H Sbjct: 209 PEAMFLNFRGGR--------LTPRSIARHLDTYVLKCA-----LTRKVSPHAMRHSFATH 255 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +L G ++ +Q L+GH S+S+T+ YT+V Sbjct: 256 LLGGGADIRSIQELLGHSSLSTTQRYTQV 284 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 33/42 (78%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +TPH RHS+A H+L AG L+ +Q L+GH+++S+T++YT + Sbjct: 259 ITPHKLRHSFATHLLDAGADLRSVQELLGHENLSTTQIYTHI 300 >UniRef50_B0TD09 Phage integrase n=3 Tax=Bacteria RepID=B0TD09_HELMI Length = 341 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 LL L++TGAR++E + L D LA P P V L +++ + ++ + T L Sbjct: 151 LLGLLYDTGARVSELIELRPKDLRLAAP-PVVTLFGKGRKSRQCPLSS------EMTGHL 203 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 191 V +W + A+ P+ G E R +I A+AA + Sbjct: 204 VKYLSAWGLDA----PAKSDHPL-----FVGHNA-----EKLTRAGVAYILSKYASAARE 249 Query: 192 GVTFSVP--VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 +P V+PH RHS AMH+L AG+ L ++ +GH S+ +TE+Y + Sbjct: 250 KDASIIPTIVSPHMLRHSKAMHLLQAGVNLVYIRDWLGHASVKTTEIYAR 299 >UniRef50_A9DNU9 Tyrosine type site-specific recombinase n=2 Tax=Bacteria RepID=A9DNU9_9FLAO Length = 428 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 37/219 (16%) Query: 28 VAIDYPAALALRQMSMVHDE------LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGA 81 + Y L +Q + D LP L E LL +P+L K +L +++ G Sbjct: 223 IKFYYEKVLGGKQQTYFIDRPKRSKPLPIVLSQKETIQLLKSIPNLKHKTILTVIYSCGL 282 Query: 82 RINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVS 141 R++E + L L + + K + ++ A R + + + + + Sbjct: 283 RVSELIDLKLSSIYLEENK--IHIVAGKGKKDRYVTLAVRTKKLIKIYIKKYAPEHYLIE 340 Query: 142 QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 ++ G+ + I + ++ + EA G+T +V TP Sbjct: 341 ----------------GQKGGKYATSSI----QKFIKKYSNEA-------GLTKNV--TP 371 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 HT RHS+A H+L GI L+ +Q ++GH++ +TE+YT + Sbjct: 372 HTLRHSFATHLLEKGISLRYIQYILGHQNSKTTEIYTHI 410 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 51/228 (22%) Query: 38 LRQMSMVHDE-------------LPKYLLAPEVSALLHYVPDLHR-----KMLLATLWNT 79 LR+ +++D+ LP L EV +LL R + +L L+ T Sbjct: 116 LRKNGIINDDPAAAIAAPKGEGYLPVVLSVDEVFSLLEMPGAGDRFAARDRAILELLYAT 175 Query: 80 GARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW- 138 G R++E L LA + R G+ RLVP+ + Sbjct: 176 GLRVSELAGLDLAQLDLA---------------DGMVRVVGK----GNKERLVPMGTAAV 216 Query: 139 -----YVSQLQTMVAQLKIPMERRNRRTGRTE---KARIWEVTDRTVRTWIGEAVAAAAA 190 Y+ Q Q ++ Q + + G +R +T R++ E + A Sbjct: 217 AAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLVNSRGGRLTSRSI-----ERLVKMYA 271 Query: 191 DGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + + V+PH RHS+A H+L G L+V+Q L+GH S+S+T+ YT Sbjct: 272 ERAGIAARVSPHALRHSFATHLLEMGADLRVVQELLGHASLSTTQRYT 319 >UniRef50_A1ASA0 Integron integrase n=8 Tax=Bacteria RepID=A1ASA0_PELPD Length = 468 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 32/40 (80%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 VT HTFRHS+A H+L AG ++V+Q+L+GH S+ +T +YT Sbjct: 412 VTSHTFRHSFATHLLQAGYDIRVIQTLLGHSSLKTTMIYT 451 >UniRef50_C4ZGY6 Tyrosine recombinase xerC n=3 Tax=Clostridiales RepID=XERC_EUBR3 Length = 306 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 45/69 (65%), Gaps = 5/69 (7%) Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 ++D++VR I + + ++ D + +TPH FRH++A +L A + ++ +Q ++GH SI Sbjct: 223 LSDQSVRRMINKYASLSSID-----LHITPHMFRHTFATSLLEADVDIRYIQEMLGHSSI 277 Query: 232 SSTEVYTKV 240 + T++YT V Sbjct: 278 NITQIYTHV 286 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 2/51 (3%) Query: 190 ADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 A G+T P++PH RHS+A H+L G+ ++ +Q L+GH+ I +TE+YT V Sbjct: 233 AAGIT--SPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYTHV 281 >UniRef50_D1KE10 Site-specific recombinase XerC n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE10_9GAMM Length = 292 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 88/222 (39%), Gaps = 49/222 (22%) Query: 25 SLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARIN 84 SLP +DY L QM L P+ SA +L ++ L++ G R++ Sbjct: 106 SLPKTLDYER---LVQM-----------LTPKSSAF----SELRDAAMVEVLYSCGLRVS 147 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 E + L D + + V M G + R PL +S Sbjct: 148 ELVGLDIEDVDASQGFLRV------------------MGKGSKV-RYTPLGES------- 181 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 AQ I R ++T T KA + T + + A V V V PH Sbjct: 182 ---AQKSI--NRYLQKTSHTNKALFVNNRQERISTRTVQNIIKNRALSVGIKVNVHPHML 236 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 RH+ A H L + L+ +Q +GHKSI ST+VYT + L+++ Sbjct: 237 RHAAATHFLQSSHDLRSVQEFLGHKSIKSTQVYTHLDFLELS 278 >UniRef50_A6G048 Site-specific recombinase, phage integrase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G048_9DELT Length = 346 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 33/185 (17%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLK-QRTEKAARTAGRMPAG 125 L + LL L+ G R++EA+AL LA L+ + + AAR R+ G Sbjct: 132 LRDRALLEVLYGAGLRVSEAVALN--------------LADLRWEGSGDAARLTLRVLQG 177 Query: 126 Q-QTHRLVPLSDSWYVSQ---LQTMVAQLKIPMERRNRRT-GRTE-------KARIWEVT 173 + R+VPL + L T L P R R+ R + AR ++ Sbjct: 178 KGNKDRVVPLGRKGAEAMRAWLDTREGLL-APTPREGMRSPARIDAGKAVFLGARGGRLS 236 Query: 174 DRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISS 233 R R + A+ A V V PH RHS+A H+L +G L+ +QS++GH S+S+ Sbjct: 237 TRVAREVVYRRCQASGARAV-----VGPHGLRHSFATHLLQSGCDLRSIQSMLGHASLST 291 Query: 234 TEVYT 238 T+ YT Sbjct: 292 TQRYT 296 >UniRef50_Q7NHT4 Glr2451 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHT4_GLOVI Length = 289 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 40/207 (19%) Query: 39 RQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAP 98 R + LP+ L + L+ +L L+ TG + E L D + A Sbjct: 99 RTLPSAERGLPRILSVAQTEKLIESAASPLESAVLELLYATGLKAGELCELRVRDVAFAE 158 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP----- 153 Y VQ PA Q R+VP+ + + + ++ +P Sbjct: 159 AYLSVQ------------------PAASQP-RVVPVGEPALAAVEAYLGSEPVLPERWLF 199 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + R+NR R RI + EA A +A D PVTP T RHS+A+H+L Sbjct: 200 VGRQNRPLNRFHIYRI-----------VREAAARSAID-----WPVTPDTLRHSFAVHLL 243 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKV 240 G L ++ L+GH S+++T +YT++ Sbjct: 244 EGGADLATVRELLGHASLATTGIYTRL 270 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 +L T+++ G RI+E LT D QL ++ + +K + +P G+ L Sbjct: 179 ILETIYSCGLRISELCGLTAQDIDWNE-----QLVRVRGKGKKERQ----VPIGEPA--L 227 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 191 + + W S L+ + P G TEKA ++ R ++ + + +A A D Sbjct: 228 TAIRNYW--STLE------QSPGGGSPVFLGETEKAAA--LSPRVLQQRLKKYLALAGLD 277 Query: 192 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 +TPH RHSYA HML AG L+ +Q L+GH + +T+VYT V Sbjct: 278 -----PSLTPHKLRHSYATHMLDAGADLRSVQELLGHAHLITTQVYTHV 321 >UniRef50_A8L6T4 Integrase family protein n=5 Tax=Actinomycetales RepID=A8L6T4_FRASN Length = 377 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 26/239 (10%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 V H + V+ A Y G+P P+ + L D + + + AL Sbjct: 138 VCHEWNTVLHLAEYE-GRPGRRPLTREEVQLL----FDYADDRVDQAVRRRRKGAL---- 188 Query: 65 PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP-FVQLATLKQRTEKAARTAGRMP 123 P +L ++ G R NEA + DF P P + L R K A +G P Sbjct: 189 PAYRDATVLKVIYGWGLRCNEASRIDLVDFYRNPKAPELGRFGLLHVRYGKGANGSG--P 246 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 + ++P W V ++ V ++ R G E +W VT+R R E Sbjct: 247 RRRTVASVMP----WAVEAVEDFVDNVRP-------RMGSREHPALW-VTERGGRLKPRE 294 Query: 184 AVA--AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 AA D + +TPH RHSY H++ G K +Q +GH+ S+ +YT V Sbjct: 295 IEERFAAYRDALALPTELTPHCLRHSYVTHLIEDGADPKFVQEQVGHRYASTLGIYTHV 353 >UniRef50_Q30R56 Tyrosine recombinase XerD subunit n=5 Tax=Epsilonproteobacteria RepID=Q30R56_SULDN Length = 278 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 50/206 (24%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LPK+L ++ L V L ++ L+ TGARI+E LAL R D Sbjct: 97 LPKFLSYQQIQNALSQVDRSSVLGLRDYAMIIFLYATGARISECLALRRED--------- 147 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ--LQTMVAQLKIPMERRNRR 160 ++ L R K + R+VP++ +V++ + + +LK Sbjct: 148 IEGEWLHIRHAKGEK-----------ERIVPIA---FVAKTAVDAYMNELK--------- 184 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFS-VPVTPHTFRHSYAMHMLYAGIPL 219 K +W + GE ++ +A +T + V+PH RHSYA ++ G L Sbjct: 185 ---KTKEYVWS-------NYKGEKLSRISAYKITQKYLGVSPHVLRHSYATALIAGGADL 234 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDV 245 +V+Q L+GH S+ +T++YT + D+ Sbjct: 235 RVVQELLGHSSLLTTQIYTHIQKQDL 260 >UniRef50_Q7UUP7 Probable integrase/recombinase Y4QK n=2 Tax=Rhodopirellula baltica RepID=Q7UUP7_RHOBA Length = 450 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 30/42 (71%) Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 VT HTFRH +A H+L+ G ++ +Q L+GH + +TE+YT V Sbjct: 380 VTSHTFRHCFATHLLWQGTDIRQIQQLLGHSDVKTTEIYTHV 421 >UniRef50_A9KXF6 Integrase family protein n=1 Tax=Shewanella baltica OS195 RepID=A9KXF6_SHEB9 Length = 210 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 28/191 (14%) Query: 47 ELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 +LP+ L +++ALL + +L ++ +LA + G R++E + D Q Sbjct: 20 KLPQLLSCQDIAALLCHCQNLKQRAMLALCYGCGLRVSELTHIKVADID-------GQRQ 72 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEK 166 LK K A RLV +S + L T++ Q T Sbjct: 73 LLKVCQGKGAYD-----------RLVIISPT-----LLTLLRQYWRAYHPVEWLFASTYH 116 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLM 226 ++ + + T A AA + + P +PH+ RH+YA H L AG+PL LQ+ + Sbjct: 117 DVVYPLHESTF-----RKALAKAARLASITKPCSPHSLRHAYATHQLQAGMPLHQLQAQL 171 Query: 227 GHKSISSTEVY 237 GH SI STE Y Sbjct: 172 GHHSIKSTERY 182 >UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GL18_9FUSO Length = 315 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 33/202 (16%) Query: 48 LPKYLLAPEVSALL----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LP+ L EV ++ H + ++++ L TGAR++E L L D Y F+ Sbjct: 131 LPEVLNLKEVKTIIDNIGHTPEGMRDRLIIKFLIATGARVSEILNLNIKDVE-NQGYEFI 189 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 ++ + G + +R+VP+ +S ++++ ++ + ++ G Sbjct: 190 KV----------------LGKGSK-YRIVPIYESL-ENEIKDYISNYRPKLK------GS 225 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 +++ T R W + + A D V PH FRHS A +L G ++++Q Sbjct: 226 ESSFKLFPDTRRE-NFW--KRLKKTAKDA-GIEKNVYPHIFRHSVATVLLSNGADIRIVQ 281 Query: 224 SLMGHKSISSTEVYTKVFALDV 245 ++GH +IS+TE+YT V D+ Sbjct: 282 EILGHANISTTEIYTHVEKSDL 303 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P18021 Resolvase n=83 Tax=root RepID=REDM_ECOLX 317 3e-85 UniRef50_D1S150 DNA integration/recombination/invertion protein ... 246 4e-64 UniRef50_Q6TFY0 ResD n=8 Tax=Enterobacteriaceae RepID=Q6TFY0_ERWAM 213 4e-54 UniRef50_Q47036 Probable site-specific recombinase in afa region... 204 2e-51 UniRef50_A7M7E5 Int2 n=1 Tax=Serratia entomophila RepID=A7M7E5_9... 199 6e-50 UniRef50_B3IBH1 Resolvase n=1 Tax=Escherichia coli E22 RepID=B3I... 190 4e-47 UniRef50_A4SUL6 Resolvase n=1 Tax=Aeromonas salmonicida subsp. s... 190 5e-47 UniRef50_B2TSE9 Resolvase n=9 Tax=Enterobacteriaceae RepID=B2TSE... 187 4e-46 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 179 6e-44 UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 179 8e-44 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 177 4e-43 UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 176 7e-43 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 176 7e-43 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 176 9e-43 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 175 1e-42 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 174 2e-42 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 174 3e-42 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 174 3e-42 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 174 4e-42 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 174 4e-42 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 173 5e-42 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 173 5e-42 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 173 6e-42 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 172 1e-41 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 172 1e-41 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 172 1e-41 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 171 2e-41 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 171 3e-41 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 170 4e-41 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 170 5e-41 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 170 5e-41 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 170 5e-41 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 170 6e-41 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 169 6e-41 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 169 8e-41 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 169 1e-40 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 168 1e-40 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 168 1e-40 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 168 2e-40 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 168 2e-40 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 167 2e-40 UniRef50_C8QGI0 Integrase family protein n=2 Tax=Pantoea sp. At-... 167 3e-40 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 167 4e-40 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 167 4e-40 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 167 4e-40 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 166 5e-40 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 166 8e-40 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 166 9e-40 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 166 1e-39 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 165 1e-39 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 165 1e-39 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 165 1e-39 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 165 1e-39 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 165 1e-39 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 165 1e-39 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 165 2e-39 UniRef50_A2U2P8 Phage integrase family protein n=1 Tax=Polaribac... 165 2e-39 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 165 2e-39 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 164 2e-39 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 164 3e-39 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 164 3e-39 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 164 3e-39 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 164 3e-39 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 164 4e-39 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 164 4e-39 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 163 5e-39 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 163 5e-39 UniRef50_Q46776 Resolvase n=16 Tax=root RepID=Q46776_ECOLX 163 5e-39 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 163 5e-39 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 163 6e-39 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 163 7e-39 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 163 7e-39 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 162 7e-39 UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA 162 7e-39 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 162 9e-39 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 162 1e-38 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 162 1e-38 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 162 1e-38 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 162 1e-38 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 162 1e-38 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 162 1e-38 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 161 2e-38 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 161 2e-38 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 161 2e-38 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 161 2e-38 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 161 3e-38 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 161 3e-38 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 161 3e-38 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 160 4e-38 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 160 5e-38 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 160 5e-38 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 160 5e-38 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 160 5e-38 UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacte... 160 5e-38 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 160 6e-38 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 160 6e-38 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 159 6e-38 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 159 6e-38 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 159 6e-38 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 159 8e-38 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 159 1e-37 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 159 1e-37 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 159 1e-37 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 159 1e-37 UniRef50_B2VB47 Putative integrases, DNA breaking-rejoining enzy... 159 1e-37 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 159 1e-37 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 158 2e-37 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 158 2e-37 UniRef50_C2G1Y8 Possible tyrosine recombinase n=3 Tax=Bacteroide... 158 2e-37 UniRef50_A0LZY5 Phage integrase family protein n=3 Tax=Bacteria ... 158 2e-37 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 158 2e-37 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 158 2e-37 UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n... 158 2e-37 UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2... 158 2e-37 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 158 2e-37 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 158 2e-37 UniRef50_B0TP43 Integron integrase n=9 Tax=Bacteria RepID=B0TP43... 158 2e-37 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 157 2e-37 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 157 3e-37 UniRef50_C8PTU7 Integron integrase n=1 Tax=Treponema vincentii A... 157 3e-37 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 157 3e-37 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 157 3e-37 UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia g... 157 4e-37 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 157 4e-37 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 157 4e-37 UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobactera... 157 5e-37 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 156 5e-37 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 156 6e-37 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 156 7e-37 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 156 7e-37 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 156 8e-37 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 156 8e-37 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 156 8e-37 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 156 8e-37 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 156 9e-37 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 156 9e-37 UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae D... 156 1e-36 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 155 1e-36 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 155 1e-36 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 155 1e-36 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 155 1e-36 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 155 1e-36 UniRef50_A9DNU9 Tyrosine type site-specific recombinase n=2 Tax=... 155 1e-36 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 155 2e-36 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 155 2e-36 UniRef50_A3XLJ3 Tyrosine type site-specific recombinase n=1 Tax=... 154 2e-36 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 154 2e-36 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 154 2e-36 UniRef50_A6H1H3 Integrase/recombinase n=2 Tax=Bacteria RepID=A6H... 154 3e-36 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 154 3e-36 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 154 3e-36 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 154 3e-36 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 154 4e-36 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 153 5e-36 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 153 5e-36 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 153 5e-36 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 153 5e-36 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 153 5e-36 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 153 5e-36 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 153 6e-36 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 153 6e-36 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 153 6e-36 UniRef50_Q1RHT1 Tyrosine recombinase xerD n=18 Tax=Rickettsieae ... 153 7e-36 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 152 8e-36 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 152 9e-36 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 152 9e-36 UniRef50_A8UM85 Tyrosine type site-specific recombinase n=2 Tax=... 152 1e-35 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 152 1e-35 UniRef50_A7JZS6 Integron integrase subfamily n=67 Tax=Gammaprote... 152 1e-35 UniRef50_C6LKW3 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 152 1e-35 UniRef50_B7IFN3 Tyrosine recombinase xerC n=3 Tax=Thermotogaceae... 152 1e-35 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 152 1e-35 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 152 1e-35 UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collins... 151 2e-35 UniRef50_D1B6D4 Integrase family protein n=3 Tax=Synergistaceae ... 151 2e-35 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 151 2e-35 UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga let... 151 2e-35 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 151 2e-35 UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofil... 151 3e-35 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 151 3e-35 UniRef50_B3QWZ3 Integrase family protein n=11 Tax=Bacteroidetes/... 151 3e-35 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 151 3e-35 UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae ... 150 4e-35 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 150 5e-35 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 149 7e-35 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 149 7e-35 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 149 8e-35 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 149 9e-35 UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia... 149 1e-34 UniRef50_C4ZGY6 Tyrosine recombinase xerC n=3 Tax=Clostridiales ... 149 1e-34 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 149 1e-34 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 149 1e-34 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 148 1e-34 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 148 2e-34 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 148 2e-34 UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=... 148 2e-34 UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylaci... 148 2e-34 UniRef50_Q9F567 IntI2 protein n=38 Tax=Bacteria RepID=Q9F567_ECOLX 148 2e-34 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 148 2e-34 UniRef50_D2LLC2 Integrase family protein n=2 Tax=Aciduliprofundu... 148 2e-34 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 148 2e-34 UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton ... 148 2e-34 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 148 2e-34 UniRef50_A6TQC7 Phage integrase family protein n=3 Tax=Clostridi... 147 2e-34 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 147 3e-34 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 147 3e-34 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 147 3e-34 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 147 3e-34 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 147 3e-34 UniRef50_Q9PL53 Tyrosine recombinase xerD n=15 Tax=Chlamydiaceae... 147 3e-34 UniRef50_A8SVW3 Putative uncharacterized protein n=1 Tax=Coproco... 147 4e-34 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 147 4e-34 UniRef50_A1U029 Phage integrase family protein n=2 Tax=Marinobac... 147 4e-34 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 146 6e-34 UniRef50_Q2GEQ3 Tyrosine recombinase XerD n=2 Tax=Neorickettsia ... 146 6e-34 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 146 6e-34 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 146 6e-34 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 146 6e-34 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 146 8e-34 UniRef50_C9NXY9 Integron integrase IntI2 n=1 Tax=Vibrio corallii... 146 8e-34 UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobi... 146 8e-34 UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia Rep... 146 1e-33 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 145 1e-33 UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacter... 145 1e-33 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 145 2e-33 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 145 2e-33 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 145 2e-33 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 145 2e-33 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 144 2e-33 UniRef50_A4CN61 Tyrosine type site-specific recombinase n=1 Tax=... 144 2e-33 UniRef50_A4BJY9 Resolvase n=1 Tax=Reinekea blandensis MED297 Rep... 144 2e-33 UniRef50_Q9A437 Tyrosine recombinase xerD n=11 Tax=Alphaproteoba... 144 3e-33 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 144 3e-33 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 144 3e-33 UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadacea... 144 3e-33 UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase f... 144 3e-33 UniRef50_D1AMH6 Integrase family protein n=4 Tax=Fusobacteriacea... 144 3e-33 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 144 3e-33 UniRef50_P55632 Putative integrase/recombinase y4qK n=15 Tax=Pro... 144 4e-33 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 144 4e-33 UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax... 143 5e-33 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 143 5e-33 Sequences not found previously or not previously below threshold: UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 154 2e-36 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 152 8e-36 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 151 2e-35 UniRef50_A4C321 Tyrosine type site-specific recombinase n=4 Tax=... 149 1e-34 UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax... 147 3e-34 UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteria... 146 6e-34 UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramese... 146 8e-34 UniRef50_Q56754 Integrase n=2 Tax=Flavobacteriaceae RepID=Q56754... 144 4e-33 >UniRef50_P18021 Resolvase n=83 Tax=root RepID=REDM_ECOLX Length = 260 Score = 317 bits (811), Expect = 3e-85, Method: Composition-based stats. Identities = 237/255 (92%), Positives = 242/255 (94%), Gaps = 1/255 (0%) Query: 13 MVPA-VYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKM 71 +PA ++ A LPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL RKM Sbjct: 3 HLPAPIHHARDAVQLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKM 62 Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 LLATLWNTGARINEALALTRGDFSL PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL Sbjct: 63 LLATLWNTGARINEALALTRGDFSLTPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 122 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 191 VPLSDSWYVSQLQTMVA LKIPMERRN+RTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD Sbjct: 123 VPLSDSWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 182 Query: 192 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV Sbjct: 183 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 242 Query: 252 QFAMPESDAVAMLKQ 266 QF+MPESDAV MLK Sbjct: 243 QFSMPESDAVTMLKN 257 >UniRef50_D1S150 DNA integration/recombination/invertion protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S150_SEROD Length = 264 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 127/258 (49%), Positives = 164/258 (63%), Gaps = 5/258 (1%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S+ + P Q + + DY AL LRQM+M +D+LPKYLLAPEV+A LHYV + Sbjct: 2 SKLLIHYPTSGGVNQSSQMIAPQDYQRALELRQMAMTYDDLPKYLLAPEVAAQLHYVEEW 61 Query: 68 HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQ 127 + + LWNTGARINEALA+ R DF L P V T KQR GR G+ Sbjct: 62 SQHAFVNLLWNTGARINEALAVCRRDFRLNVTMPHVIYRTAKQRRA----GPGRPKKGKS 117 Query: 128 THRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAA 187 HR+VPL+D +V +L+ + A K E N TG IW+VTDRTVR W+ +A Sbjct: 118 AHRIVPLTDPLFVDELRRLFASTKEQFE-INPETGERTPLPIWQVTDRTVRNWLTKAENQ 176 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 A DG+ FS+P+TPH FRHSYAMHM+Y G PLKVLQ L+GH+ STEVYT+VFALD+ A Sbjct: 177 ARRDGIRFSIPITPHVFRHSYAMHMIYQGTPLKVLQGLLGHEKPESTEVYTRVFALDIVA 236 Query: 248 RHRVQFAMPESDAVAMLK 265 H+VQF++P D++ M++ Sbjct: 237 SHQVQFSLPAQDSLDMVR 254 >UniRef50_Q6TFY0 ResD n=8 Tax=Enterobacteriaceae RepID=Q6TFY0_ERWAM Length = 246 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 114/230 (49%), Positives = 150/230 (65%), Gaps = 17/230 (7%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 DY ALALR+M+ D LPKYLLAPEVS L YVPDL +++L TLWNTGARINEALAL Sbjct: 27 FDYADALALREMASQAD-LPKYLLAPEVSVFLRYVPDLRQQVLFDTLWNTGARINEALAL 85 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 T F L PFV+L TLKQR R GR ++ RLVPL+D YV +++ + Sbjct: 86 TGASFQLDGSRPFVRLKTLKQRQ----RGRGRPGKDEEVFRLVPLTDPQYVRKVREFLTT 141 Query: 150 LKIPMERRNRRTGRTEKARIWEV-TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 L+I ++ +W V +D T R WI +A+ A D VTFS+PVT HTFRHS+ Sbjct: 142 LRI-----------GKQQLLWPVQSDNTPRNWIRKALDLAKRDSVTFSIPVTCHTFRHSF 190 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPES 258 MH++ G+PLKV+Q+ GH + +TE YT+VFALDV ++ V+F++P+S Sbjct: 191 CMHLIQHGVPLKVVQAYAGHSRLETTETYTRVFALDVGRQYGVRFSLPDS 240 >UniRef50_Q47036 Probable site-specific recombinase in afa region n=45 Tax=Bacteria RepID=INTL_ECOLX Length = 246 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 115/257 (44%), Positives = 151/257 (58%), Gaps = 20/257 (7%) Query: 13 MVPAVYSAGQPASLPVA--IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRK 70 ++P S + + LP+A +D+ AL+LR+M+ P YLLAPEVSALL Y+PD Sbjct: 4 VIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHH 63 Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 ML ATLWNTG RI EA +T F L PFV++ + K R + GR P + R Sbjct: 64 MLFATLWNTGMRIGEARIVTPESFDLDGVRPFVRVLSEKVRARR-----GRPPKDE--VR 116 Query: 131 LVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAA 190 LVPL+D YV Q+++ + + + +W VTD T+R W+ +AV A A Sbjct: 117 LVPLTDISYVRQMESWMITTRP-----------RRREPLWAVTDETMRNWLKQAVRRAEA 165 Query: 191 DGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 DGV FS+ VTPHTFRHSY MHMLY P KV+Q+L GH+ S EVYT+VFALD+AA Sbjct: 166 DGVHFSISVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLA 225 Query: 251 VQFAMPESDAVAMLKQL 267 V F DA +L+ L Sbjct: 226 VPFTGDGRDAAEILRTL 242 >UniRef50_A7M7E5 Int2 n=1 Tax=Serratia entomophila RepID=A7M7E5_9ENTR Length = 236 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 104/236 (44%), Positives = 140/236 (59%), Gaps = 13/236 (5%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 D+ A+A+R+M++ + P YLLAPE++ LL + DL R+ML LWNTGARINEALA+ Sbjct: 9 FDFAQAVAMRRMALNLSDQPAYLLAPEITLLLDNMTDLRRRMLFDFLWNTGARINEALAV 68 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 T D L PFV L TLKQR A R GR R +PL D + +L+ +A Sbjct: 69 TPKDIVLDAVKPFVVLRTLKQRNHTAGR-RGRPGKDTPVKRTLPLLDPSFARRLRDHLAT 127 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHSY 208 R +WE++D T R W+ EA+ A +G+ FS+ +TPHTFRHS+ Sbjct: 128 FT-----------RYVTKPVWEISDDTARNWLKEALGHAQRNGMHFSIESITPHTFRHSF 176 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAML 264 AMH+LY + K+LQS MGH+ STE+YT+VFALDVA + V+F M A +L Sbjct: 177 AMHLLYNRVHPKILQSFMGHRDYKSTEIYTRVFALDVAGQLGVRFDMTPEQAFKLL 232 >UniRef50_B3IBH1 Resolvase n=1 Tax=Escherichia coli E22 RepID=B3IBH1_ECOLX Length = 236 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 102/237 (43%), Positives = 144/237 (60%), Gaps = 16/237 (6%) Query: 29 AIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALA 88 A +Y A+ALR M+++ LPKYLLAPEV+ LLHY+PD ++ML ATLW TG RI EAL Sbjct: 12 ATNYETAIALRGMALLQPYLPKYLLAPEVAVLLHYLPDERQRMLFATLWITGPRITEALT 71 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 +T D L P ++L LKQR R GR A ++ R+VPL D+ YV QL+ +A Sbjct: 72 ITPEDLQLDGPRHCIRLRKLKQRQ----RGRGRPSADEKIARIVPLLDAAYVDQLRRYLA 127 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHS 207 RTGR + ++ V+ +T W+ +A+ A + + F++P + P T RHS Sbjct: 128 TF---------RTGR--RRPLFAVSRKTAWLWMQQAIDRAREEVIEFALPAINPKTLRHS 176 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAML 264 +AMH+ + +P KV+Q+ MGH+ STEVY KVFALDVA + V F++ D +L Sbjct: 177 FAMHLYFNHVPPKVVQAYMGHERYESTEVYLKVFALDVAPQLGVTFSLAHRDYSHLL 233 >UniRef50_A4SUL6 Resolvase n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUL6_AERS4 Length = 256 Score = 190 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 117/252 (46%), Positives = 150/252 (59%), Gaps = 23/252 (9%) Query: 15 PAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLA 74 P V AG P VA ALR +++ H + P+YLLA EV A+L +PDL R++L+A Sbjct: 24 PLVRPAGNPEQWRVAT------ALRNLAIAHTDAPRYLLAHEVGAVLAMLPDLQRRVLIA 77 Query: 75 TLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPL 134 TLWNTGARINEALALT GDF L PFV L TLKQR +R GR AG RLVPL Sbjct: 78 TLWNTGARINEALALTPGDFELDGGRPFVVLRTLKQR----SRGKGRPRAGDAVKRLVPL 133 Query: 135 SDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVT 194 D + + +A +K+ ARIW VTD+TVR W+ EA A GV Sbjct: 134 LDPVFAQLAREYLATVKL-----------ARGARIWPVTDQTVRNWLKEADTALRGRGVH 182 Query: 195 FSVPVTPHTFRHSYAMHMLYAG-IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH-RVQ 252 VP+TPH FRH++AMH+L G + +K LQ+ +GH+S+ STEVYT+V ALD AA + Sbjct: 183 LVVPLTPHVFRHAFAMHLLLQGNLHIKRLQAYLGHRSLKSTEVYTQVLALDAAASEIGLS 242 Query: 253 FAMPESDAVAML 264 F++ +L Sbjct: 243 FSVANEGNPLLL 254 >UniRef50_B2TSE9 Resolvase n=9 Tax=Enterobacteriaceae RepID=B2TSE9_SHIB3 Length = 299 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 113/277 (40%), Positives = 155/277 (55%), Gaps = 31/277 (11%) Query: 9 QSAVMVPA-VYSAGQPASLPVAIDYPAALALRQMS-MVHDELPKYLLAPEVSALLHYVPD 66 + +PA ++ + + + + AA +R ++ + +PKYL+APEVS LL Y+ D Sbjct: 24 KKLSHLPASIFQISRSDAWNLTLSPDAARNMRDLAAQIGAGMPKYLIAPEVSLLLSYIDD 83 Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAP----PYPFVQLATLKQRTEKAARTAGRM 122 L+ +M TLWNTGAR+NEALAL DF L P P P V L TLKQR ++A R GR Sbjct: 84 LNIRMYFETLWNTGARLNEALALKPADFMLTPTRQYPQPVVILKTLKQRLKEAERRPGRP 143 Query: 123 --------------PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKAR 168 + RLVP+ D+ Y +++ +A K R + Sbjct: 144 TTRHPPLHPDPRYRKPQEPAVRLVPVLDAGYALRMREYLATWKK----------RIKHQP 193 Query: 169 IWEVTDR-TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 227 +W++T R T WI AVA A DGVTFSVPVTPHTFRHSYAMH+ +G+P +VLQSL+G Sbjct: 194 VWDITSRQTPLNWINTAVARAERDGVTFSVPVTPHTFRHSYAMHLTMSGVPPRVLQSLLG 253 Query: 228 HKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAML 264 H+ STE+YT+VF+LDV + F A +L Sbjct: 254 HRYARSTEIYTRVFSLDVLTGSGLSFTCDPRRAKQLL 290 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 84/227 (37%), Gaps = 33/227 (14%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYV------PDLHRKMLLATLWNTGARINEALA 88 L Q+ D+LP + E++ L V L +L L+ TG R++E A Sbjct: 94 PFELVQLKKQSDKLPHFFYEKEMNMLFEAVYQAEGAQKLRNIAILEVLYGTGMRVSECAA 153 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L D + V R VP + LQ Sbjct: 154 LQWSDIDFSMQTILVLGKG-------------------NKERYVPFGR-YAKEALQNYRK 193 Query: 149 QLKIPMERRNRRTGRTE--KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 P + ++T +T + + + + A++ +G + PH RH Sbjct: 194 NEWEPFLSKYKQTHNFVFINHYAKPITTTGIEYILNQVITASSLNG-----KIHPHMLRH 248 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 S+A +L G L+ +Q L+GH S+S+T++YT V + +R F Sbjct: 249 SFATALLNNGADLRTVQELLGHSSLSTTQIYTHVTKEKLQESYRKYF 295 >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 179 bits (454), Expect = 8e-44, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 104/250 (41%), Gaps = 31/250 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 HS A + ++ S + L +D + L + + +LP+ L EV L+ Sbjct: 68 HSSIARSLSSIKSYYKFLILEGELDKNPSSDL-ETPKIKRKLPQVLSIEEVDKLMEQPNP 126 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + + +L ++ TG R++E L+L D + + K Sbjct: 127 VVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLNPTAGFLRCMGKGRK------------ 174 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R++P++ + + +Q +A+++ + + AR ++ + + Sbjct: 175 -------ERIIPVNQTS-IDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSRQGFFKIL 226 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 G V A + VTPHT RHS+A H+L G L+ +Q ++GH IS+T++YT + Sbjct: 227 GNYVEKAELE-----KEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLT 281 Query: 242 ALDVAARHRV 251 + ++ Sbjct: 282 KSRLREVYQQ 291 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 177 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 33/225 (14%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALAL 89 + ++ LPK L EV+ +L+ L K +L L+ TG R++E + L Sbjct: 93 PVQPLKVPKKSKMLPKALTVDEVTQVLNSCDTSTVLGLRDKAMLELLYATGMRVSELITL 152 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D L + KQR +P GQ V Y++ + ++ Q Sbjct: 153 KLSDLHLELGFLQTIGKGNKQRI---------IPIGQAATNWV----QHYLTYARVVLEQ 199 Query: 150 LKIPME--RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 P+E N R + W+ + V+ V+PHT RHS Sbjct: 200 ESNPVEYLFLNHRGNGFTRQGFWKNLKKIVQ-------------EAGVHKDVSPHTLRHS 246 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 +A H+L AG L+++Q L+GH IS+T++YT + + ++ Sbjct: 247 FATHILEAGADLRIVQELLGHSDISTTQIYTHLTNERMKEIYQQA 291 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 33/216 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 +LP++L EV LL+ + + ++ TL+ TG R++E + + D + Sbjct: 102 PKAEKKLPQFLSVDEVMKLLNSPSLDDLIGIRDRAIIETLYATGIRVSELVGMNEEDINW 161 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 R+ + R+V + + + LQ ++ + + Sbjct: 162 NYGEI-------------------RVFGKRAKERIVIVGEET-LKILQLYKDHVRPKLLK 201 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + + A+ ++DR +R I + F+ V+PHT RH++A H+L G Sbjct: 202 KPEKAFFL-NAKGGRISDRAIRMIIKKYTK-------DFNKKVSPHTLRHTFATHLLEGG 253 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 L+ +Q L+GH IS+T++YT + + + + + Sbjct: 254 ADLRYVQELLGHVRISTTQIYTHLTSEQIRKTYTLS 289 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 32/217 (14%) Query: 41 MSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFS 95 + +LP +L E+ L D + +L L+ TG R+ E L D Sbjct: 124 LPKQASKLPSFLYEEEMDELFKAFEGNTPLDKRDRAILELLYATGMRVGECSQLDVADID 183 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L FV+ R VP+ S+ L + ++ + Sbjct: 184 LRIGTAFVKGKG-------------------NKERYVPIG-SFACDALHEYIEDARVNLL 223 Query: 156 RRNRRTGR--TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 ++ + R +TDR++R + + V A + + PH RHS+A H+L Sbjct: 224 KKGNSETKRLFLNYRGGPLTDRSIRRMLAKRVEEA-----SMQKHIRPHDLRHSFATHLL 278 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+V+Q L+GH+ +S+T+VYT V + ++ Sbjct: 279 NNGADLRVVQELLGHEHLSTTQVYTHVTKDRLREVYK 315 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 176 bits (445), Expect = 9e-43, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 24/217 (11%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 M LPK + EV+ +L L + LL L++TGARI+EA+ L D SL Sbjct: 158 PMAGKRLPKAITVDEVTRILEAAGTDTATGLRDRALLEFLYSTGARISEAVGLDVDDISL 217 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 A + R+ RLVPL S+ L+ + + + + Sbjct: 218 AGD------------DTEQGPAIVRLFGKGSKERLVPLG-SYGARALEAYLVRGRPLLAA 264 Query: 157 RNRRTGRTE-KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + + T AR ++ ++ T + AA+ + V+PHT RHS+A H+L Sbjct: 265 KGKGTPALFLNARGGRISRQSAWTIL-----KVAAEKANITRDVSPHTLRHSFATHLLEG 319 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 G ++V+Q L+GH S+++T+VYT V A + + Sbjct: 320 GADVRVVQELLGHASVTTTQVYTLVTADTLREVYAAA 356 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 50/260 (19%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S SV+H M ++ + + + P ++L Q+ LP +L EV LL Sbjct: 68 SNSVVH-----MATSIRNFHEDIEFSTGEENP--VSLIQVRKNETYLPSFLSVEEVKQLL 120 Query: 62 HY-----VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 + + +L ++ G RI+E +LT L Sbjct: 121 NSFTRDDPKQELNRTILELIYACGLRISELCSLTVAQVQLETGIL--------------- 165 Query: 117 RTAGRMPAGQQTHRLVPLSDS------WYVSQLQTMVAQLKIPMERRNRRTGRTEKARIW 170 R+ R+VP+ + +Y++ ++ + Q K N R Sbjct: 166 ----RILGKGNKERIVPIPNQVVKDLDYYLNLIRPIWNQHKTNTFFINHLGNR------- 214 Query: 171 EVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKS 230 +T R+++ + + F +TPH+ RH+YA H+L AG L+++Q L+GH + Sbjct: 215 -ITARSIQLLLKQKAMECG-----FQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSN 268 Query: 231 ISSTEVYTKVFALDVAARHR 250 I +TE+YT V + ++ Sbjct: 269 IKTTEIYTHVQNRQLFEAYQ 288 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 29/221 (13%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTR 91 AL + LPK L +V +LL +L K +L L+ TG R+ E ++LT Sbjct: 120 ALLISPKLPKRLPKDLSEEQVDSLLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTM 179 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 + SL V K RLVP+ ++ V ++T + Q + Sbjct: 180 ENISLRQGVVRVIGKGGK-------------------ERLVPMGEN-AVDWIETFIEQGR 219 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 + N R ++T +T I A D +PH RH++A H Sbjct: 220 PQLLGDNSSDVVFPSKRAKQMTRQTFWYRIKHYSVIAGIDTELL----SPHVLRHAFATH 275 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 +L G L+V+Q L+GH +S+T++YT V + H Sbjct: 276 LLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHAQH 316 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 31/249 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 SA + ++ S Q D ++ + LPK L EV LL Sbjct: 69 KTSARHLASIRSFHQFLLREKVTDKDPSVHIETQKT-ERALPKVLALNEVERLLDTPKLT 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 K +L L+ TG R++E + L D L+ + R Sbjct: 128 SPFGYRDKAMLELLYATGIRVSEMIELKTADVHLSMGFI-------------------RC 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R+VP+ ++ S ++ + + + + + N +++ + + Sbjct: 169 FGKGRKERIVPIGEAAA-SAIEEYMTKARGKLLKNNVSDALFLNHHGKQISRQGFWKNLK 227 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A +TPHT RHS+A H+L G L+ +Q ++GH IS+T++YT V Sbjct: 228 KIALEAG-----IKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTK 282 Query: 243 LDVAARHRV 251 + ++ Sbjct: 283 TRLKDVYKQ 291 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 95/250 (38%), Gaps = 33/250 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 A + + S Q ++ L +LP L EV ALL PDL Sbjct: 68 KSIARFISTIRSFHQ-FAIREKYAAKDPTVLLDSPKYDKKLPDVLNVDEVLALLE-TPDL 125 Query: 68 ------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + +L L+ TG R++E + L + +L + R Sbjct: 126 NKINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGFV-------------------R 166 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + R+VPL D+ + L T + ++ + ++ ++ + + I Sbjct: 167 VFGKGDKERIVPLGDA-VIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKMI 225 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + A +TPHT RHS+A H+L G L+ +Q ++GH IS+T++YT V Sbjct: 226 KQNGVKA-----NIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVS 280 Query: 242 ALDVAARHRV 251 + + Sbjct: 281 KSQIRKMYNQ 290 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 174 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 32/225 (14%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALT 90 L + +LP +L EV+ LL D +L L+ TG R+ E L Sbjct: 99 PFKLVHTPKIEKKLPVFLDEREVAELLELPADDVLGRRDAAILELLYATGIRVAELTGLK 158 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 D L + V K R+VP+ + + L+ +A Sbjct: 159 TSDVDLVSRFVIVCGKGAK-------------------ERIVPIGRTAA-AALERYLADA 198 Query: 151 KIPMERRNRRTGR---TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 + + + R+ ++ +TDR+VR I + +A + + V+PHT RH+ Sbjct: 199 RPRLYSKWRKEQHQFLFINSKGGPLTDRSVRRIIDKYIA-----NLAVAKKVSPHTIRHT 253 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 +A HML G L+ +Q ++GH ++S+T++YT V + A +R Sbjct: 254 FATHMLNNGADLRSVQEMLGHVNLSTTQLYTHVTKERLKAVYRET 298 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 174 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 43/219 (19%) Query: 42 SMVHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGARINEALALTRGDFSL 96 + +P++L E+ L + L + + ++ G R++EA++L D Sbjct: 107 PKIAKRIPEFLFYDEIEIFLESFDLNSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDF 166 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW------YVSQLQTMVAQL 150 A + K RLVP D Y+ ++ + A Sbjct: 167 ADNILHIHGKGDK-------------------ERLVPFYDLAKELLVSYIKDVRDVWATS 207 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 N+R ++T R V+ + +AV + V V PH FRHS+A Sbjct: 208 DETALFVNQRG--------KKLTTRGVQYLMNKAV-----EKCDLHVHVHPHMFRHSFAT 254 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L G L+ +Q L+GH S+S+T++Y V + A + Sbjct: 255 HLLDNGADLRYVQELLGHSSLSTTQIYVHVSKERLKAAY 293 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 84/214 (39%), Gaps = 31/214 (14%) Query: 42 SMVHDELPKYLLAPEVSALLH------YVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 V LP + +V ALL+ K +L L+ +G R+ E + L D Sbjct: 106 PKVGKPLPDAISISQVRALLNQPVKSGSSEAKRDKAMLELLYASGMRVTELVNLNVLDVD 165 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L + R + R++P+ +Q + +++ + Sbjct: 166 LKEGFV-------------------RCFGKGRKERMIPIYPQAA-QSIQEYLTEIRPNLV 205 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 R R +T + + + A D V VTPHT RHS+A HML Sbjct: 206 RAETEKALFLNRRGDRLTRQGLWQILKGYAREAGLDDV-----VTPHTLRHSFATHMLSG 260 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+ +Q L+GH +IS+T++YT + + + + Sbjct: 261 GADLRSVQELLGHANISTTQIYTHLTSEHIKRSY 294 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 19/235 (8%) Query: 23 PASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----HYVPDLHRKMLLATLW 77 ++L V D A + + LPK + ++ LL L + +L L+ Sbjct: 209 VSALIVPTDPAAPVTPPKNV---KRLPKAVSVEDIQRLLAVPDRETATGLRNRAILEFLY 265 Query: 78 NTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS 137 TGAR++E L D T + + R+ RLVP+ S Sbjct: 266 ATGARVSEMLNADIDDVHFEGT------LTDEDGNQITLPGYVRLFGKGNKERLVPIG-S 318 Query: 138 WYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSV 197 + +Q + + + + G+ A + + AA+ S Sbjct: 319 YAQKAIQDYLVRARPSLVAH----GKGTAALFVNGRGGRLGRQGAWLILKEAAEAAGLSS 374 Query: 198 PVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 +PH+ RHS+A H+L G ++V+Q L+GH SI++T+VYTKV + +R+ Sbjct: 375 DFSPHSMRHSFATHLLQGGADIRVVQELLGHASIATTQVYTKVTPEGLMEVYRMA 429 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 31/216 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGARINEALALTRGDF 94 + V +LP+ L EV LL + K +L L+ TG R++E ++L D Sbjct: 101 ESPKVEKKLPQILSTKEVELLLEQPKCDDLKGYRDKAMLELLYATGIRVSELISLDLDDV 160 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L Y R K AR R+VP+ S V+ LQ + + + + Sbjct: 161 NLEMQYI---------RCNKGAR-----------ERIVPIG-SVSVNALQEYLTKSRNLL 199 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 +R +T + I + A + +TPHT RHS+A H+L Sbjct: 200 IQRPDEKALFVNVNGKRLTRQGFWKIIKQYKNQA-----KINKDITPHTLRHSFAAHLLE 254 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+ +Q ++GH ISST++Y ++ + ++ Sbjct: 255 NGADLRSIQEMLGHSDISSTQIYAQLAKNRIKEIYK 290 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 89/225 (39%), Gaps = 31/225 (13%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL-----HRKMLLATLWNTGARINEA 86 ++ + +LP L E+ +L + + ++ L+ TG RI+E Sbjct: 93 KENLMSSFTLPKRDKKLPIILSQEEMIEILDGIIVCDAISSRNRCMVELLYATGMRISEL 152 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 L LT D ++ + ++ R++P+ S+ L+ Sbjct: 153 LNLTLKDLNIKMGFI-------------------KVIGKGNKERMIPIG-SYVGEILEQY 192 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + + +N + + + + ++ + + + V+PHTFRH Sbjct: 193 INDYRAEFNIKN------DSLLFFNKHGQRLSREEFYSILQTIVNSTSITKKVSPHTFRH 246 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 ++A H+L G L+ +Q L+GH IS+T +YT + + + ++ Sbjct: 247 TFATHLLENGADLRSIQELLGHSDISTTTIYTHISNQKIRSEYQQ 291 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 34/220 (15%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP++ E+ ++ + D K L+ L+ TG R++E LT L Sbjct: 108 LPEFFYEDEIEKFINSIDGNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSIIL 167 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V K R VP+ D + + L+T + + + + + R+ Sbjct: 168 VIGKGSK-------------------ERYVPIGD-FARTALETYLEEGRKDLMAKERKEH 207 Query: 163 RTE--KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 +T VR + + + + ++ + PH RH++A H+L G ++ Sbjct: 208 FFVFVNHLGDPLTTNGVRYILEKLIQESG-----LTLKIHPHMLRHTFATHLLNNGADMR 262 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDA 260 +Q L+GH S+SST++YT V + +++ F P S A Sbjct: 263 TVQELLGHVSLSSTQIYTHVTKEALQQNYQLYF--PRSKA 300 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 43/226 (19%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVP------------DLHRKMLLATLWNTGARI 83 L Q LPK L EV +L+ V + K++L L++TG RI Sbjct: 127 LEDVQNPKRTKSLPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRI 186 Query: 84 NEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL 143 +E + L + D V+ + R+V L D + Sbjct: 187 SELVKLQKKDIDFDERTIRVRGKG-------------------EKDRIV-LFDENTRDLI 226 Query: 144 QTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 + E ++T R V+ I E A VTPH Sbjct: 227 DNYIETQNQKSEYL------FINKNGRKLTPRYVQMMIKEYAEKAG-----IKKKVTPHV 275 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 RHS+A H+L G+ ++V+Q L+GH S+S+T++YT V + + + Sbjct: 276 LRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQIYTNVDMDTIKSVY 321 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 33/214 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSL 96 + + LP L EV LL+ + D + K +L L+ G R++E + L D +L Sbjct: 103 PNLPENLPDILTFDEVDLLLNSINDDDEMHIRNKAMLELLYAAGLRVSELINLKFSDINL 162 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + R+ RLVP + + I +++ Sbjct: 163 EDCFL-------------------RIIGKGSKERLVPFGNKAKF--------FISIYLKK 195 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 R + I + + R + A V + +TPHT RHS+A H+L G Sbjct: 196 RRPCLNVNDHIFISRLGKKLSRIEFWRQLKNIA-KNVGINKNITPHTLRHSFASHLLKGG 254 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 ++ +Q ++GH SI++T++YT + + +H+ Sbjct: 255 ADIRFVQEMLGHASITTTQIYTHLDEDRIVQQHK 288 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 171 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 32/228 (14%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARIN 84 I+ + L + +LP L E+ LL+ +P ++ K+++ L+ TG RI+ Sbjct: 107 IETKVDMDLVPRIKLGVQLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRIS 166 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 E L+++ D +L V KQR T + A Y+ Q + Sbjct: 167 ELLSISLHDLNLTERVILVHGKGSKQRYVPYVDTLDELFAK-------------YLKQSR 213 Query: 145 TMVAQLKI-PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 ++ +LK + N R R + W++ + V VTPHT Sbjct: 214 PILLKLKQSELLFLNNRGERMSRMGFWKILRKAV-------------LEANIKKEVTPHT 260 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 FRHS+A H+L G+ L+++Q+L+GH SI +T++YT + + ++ Sbjct: 261 FRHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTHIDMKRLVETYKE 308 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 30/216 (13%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTRGDF 94 +++ V LP L E+ LL + +L ++ TG R++E ++LT G Sbjct: 100 ELAKVWMRLPDTLSHEEMDQLLSQPGVRTDSAIRDTAMLELMYATGLRVSELISLTTGSI 159 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 + Y VQ R+VP+ Y ++ +++ Sbjct: 160 NWQVGYLVVQGKG-------------------NKERIVPIGQVAY-EHVRRYFDEVRPKC 199 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 R + +T + + + A V PHTFRHS+A H+L Sbjct: 200 IRGAQTNVLFLNKSGQGMTRQGFWKLVRKYAVKAG-----LQKKVHPHTFRHSFASHLLE 254 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+ +Q ++GH IS+T++YT V + H+ Sbjct: 255 GGADLRSVQMMLGHADISTTQIYTHVTREHLKDIHK 290 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 36/213 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 +LP ++ + LL+ L K ++ TL++TG R++E + + D Sbjct: 110 PKTDKKLPGFMSVNDTEILLNQPDTCNLSGLRDKAIMETLYSTGMRVSELVGINIADIDF 169 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V+ K R++P+ + ++ +Q + + K E Sbjct: 170 HSGIVKVRGKGSK-------------------ERILPVG-NHALNAIQLYLEKRKADNE- 208 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +T+R+V I + + AA + V+PHTFRHS+A H+L G Sbjct: 209 -----ALFLNKFHGRLTERSVARMIEKYMKKAA-----MHLRVSPHTFRHSFATHLLDNG 258 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q +GH S+S+T++YT V + + Sbjct: 259 ADLRAVQEFLGHSSLSTTQIYTHVTTERLKQVY 291 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 99/251 (39%), Gaps = 41/251 (16%) Query: 4 SVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY 63 S I + A P++L V+ P LPK + +V ALL Sbjct: 84 SAIRRLFQYLHREKVRADDPSALLVSPKLPQ------------RLPKDISEEQVDALLDA 131 Query: 64 VP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 +L K +L L+ TG R+ E ++LT + SL V K Sbjct: 132 PDPNDPVELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVTGKGGK--------- 182 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVR 178 RLVP+ ++ + ++T + Q + + R ++T +T Sbjct: 183 ----------ERLVPMGEN-AIDWIETFIKQGRPALLGETSSDVVFPSKRARQMTRQTFW 231 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 I A D + ++PH RH++A H+L G L+V+Q L+GH +S+T++YT Sbjct: 232 HRIKFYAVIAGID----TDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYT 287 Query: 239 KVFALDVAARH 249 V + H Sbjct: 288 HVATERLKQIH 298 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 28/212 (13%) Query: 43 MVHDELPKYLLAPEVSALLHYVPDL--HRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 ++P +L E+ LL+ +PDL + ++ ++ G RI E ++L + Sbjct: 124 KKDKKVPSFLTENEMQMLLN-LPDLKPRDRAMIELFYSCGLRIEELVSLDLKNIDFISNV 182 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 V + R+VP+ D + ++ + + + + R Sbjct: 183 VTVTGK-------------------RNKERIVPVGD-ICLHAIKDYINKRRNLGLPYDIR 222 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 + R + RT R + A F+ V+PHT RH++A H+L G L+ Sbjct: 223 SPVFLSDRAKRLGQRTARRILHRYFVKAG-----FTKKVSPHTLRHTFATHILDRGCDLR 277 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 +Q ++GHK++SST++YT V + ++ Sbjct: 278 SVQEMLGHKNLSSTQIYTHVTIESLKKVYKET 309 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 93/248 (37%), Gaps = 32/248 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---- 63 S + + ++ S Q ID L + V +LP+ L EV LL Sbjct: 68 STISRNLASIRSFYQFLYKDKVIDNDPTSEL-ESPKVEKKLPQILSTQEVELLLDQPKCL 126 Query: 64 -VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + K +L L+ TG R++E ++L D + Sbjct: 127 DLKGIRDKAMLELLYATGIRVSELISLNLDDINFDLGLIKCN------------------ 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R +P+ S + + + + + + + ++ +T + I Sbjct: 169 --KGTRERTIPIG-SISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQGFWKIIK 225 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A + +TPHT RHS+A H+L G L+ +Q ++GH ISST++Y ++ Sbjct: 226 HYKNQA-----KINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQIAK 280 Query: 243 LDVAARHR 250 + ++ Sbjct: 281 NKIKDVYK 288 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 87/225 (38%), Gaps = 32/225 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LP+ L E+ + L + +L T + TG R++E + L + L Sbjct: 99 PKIPMYLPEVLDPKEIESFLKIPDPLSPLGIRNMAILETFYATGIRVSELVNLNIQNVDL 158 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 Y R + R+VPL D V LK + Sbjct: 159 EEKYV-------------------RCFGKGEKERIVPLGDYA--------VESLKRYLSV 191 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 R+ + ++A + + A + + V+PHTFRHS+A H+L G Sbjct: 192 RHLFNPKDKEALFLNKKGERITRQGVWFIIKAYSKILGLPKKVSPHTFRHSFATHLLSNG 251 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAV 261 ++++Q L+GH I++T++YT + + + ++ + + Sbjct: 252 ADIRIVQELLGHSDIATTQIYTHIVSSKLHEVYQRAHPLMRRNTK 296 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 30/216 (13%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDF 94 + V +P YL E+ L + + L K + L+++G RI+EA L D Sbjct: 102 ETPEVMRSIPDYLTQDEIEELFASIKEDNLYELRDKCIFELLYSSGLRISEACNLRLNDM 161 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 L V+ +Q RLVP + + L + Q + + Sbjct: 162 DLEGMTLTVEGKGGRQ-------------------RLVPFGEKS-LDILNRYLKQSRPFI 201 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + + + ++V + + + VTPHT RHS+A H+L Sbjct: 202 LKSRNCEYLFVSKKGSYINRKSVWRLLNHYIKRT-----SILKKVTPHTLRHSFATHLLE 256 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 LK +Q L+GH I++T++YT + + H+ Sbjct: 257 NHADLKSVQELLGHIDIATTQIYTHMANKTLREVHK 292 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 27/223 (12%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSL 96 + LPK+L + L+ + K +L +++G R++E L D L Sbjct: 100 VKIKRALPKFLTVDDAFKLVEAPSEDKFTVQRDKAILELFYSSGIRVSELCGLNLEDLDL 159 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V+ K+R +P GQ+ + Y++ Q + + K+ ++ Sbjct: 160 KEGLIKVRGKGKKERI---------VPVGQKAKEAL----KKYLAIRQILRIKKKLSLDE 206 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 T R ++DR VR + + + + PHT RH++A H+L G Sbjct: 207 ----TPLFINNRGQRISDRQVRRIVEKYAK-----FIGVLEKIGPHTLRHTFASHLLMEG 257 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 L+V+Q L+GH S+S+T++YT V + + + + D Sbjct: 258 ADLRVIQELLGHASLSTTQIYTHVDLKHLIEVYDKSHPLSKED 300 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 83/229 (36%), Gaps = 30/229 (13%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINE 85 A + + +LP++L EV L D L L+ L+ TG RI E Sbjct: 95 KKNPFANIEFRSSNKKLPEFLYPAEVIEYLRAAADPQNDQYLRNSALIELLYATGMRIFE 154 Query: 86 ALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQT 145 LT + + R++P S Q Sbjct: 155 ITNLTFSQIDFNSQIVDITGKG-------------------KKQRIIPFGKPALASLKQY 195 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 + + K + + + R ++T+ + + + + + PH R Sbjct: 196 LPWREKTMQKFSEKHSYIFINTRGRQLTETGAEYILKQVSKRS-----KLTANIHPHMLR 250 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 HS+A H+L G ++ +Q L+GH S+S+T++YT + ++ ++ F Sbjct: 251 HSFATHLLNNGADIRTVQELLGHASLSTTQIYTHITTENLQENYKKFFD 299 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 30/211 (14%) Query: 48 LPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP YL PE+ LLH + K ++ L++ G RI+E L F+ + Sbjct: 104 LPDYLSLPEIERLLHIYDEAIPLQFRNKFIIELLYSCGLRISELCGLRTDSFNYESGFLR 163 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V+ K R VP S + + ++ + ++N Sbjct: 164 VKGKGSK-------------------ERSVPFGTQVA-SMSRQYIKNIRPQLCKKNNPPE 203 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 +T V ++ EA A + + PH RHS+A H+L L+++ Sbjct: 204 LIVSNNGRPLTRSRVWQFLKEAAIKA-----EINKNLHPHVLRHSFASHLLSNNADLRII 258 Query: 223 QSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 Q L+GH I++TE+YT V + H+ F Sbjct: 259 QELLGHADIATTEIYTHVEKTRLQNIHQKFF 289 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 49/217 (22%) Query: 48 LPKYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LPK L EV+ L PDL + +L ++ TG R++E LAL G +LA Y Sbjct: 109 LPKVLSVDEVNRLFEA-PDLDTPEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHYV 167 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-- 159 K RL+PL + + L+ +++++ + NR Sbjct: 168 IAYGKGAK-------------------ERLIPLG-HYAIEYLKEYLSRVRPHFVKENRPC 207 Query: 160 -------RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 R + R W++ V + +TPH RHS+A HM Sbjct: 208 DDLFLTIRGTGMTRQRFWQL-------------IKNYGLKVHIAKSLTPHILRHSFATHM 254 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L G L+ +Q L+GH IS+T++YT + + A + Sbjct: 255 LDNGADLRTVQELLGHSDISTTQIYTHLTNHRLKAIY 291 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFS 95 + LP+ L A E+ A+L VPD L + LL T++ TG R++E L D Sbjct: 107 PKKNSHLPQVLTATEIEAVL-AVPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLH 165 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 KQ R+VP+ + + + + + + Sbjct: 166 DELGLITTIGKGQKQ-------------------RIVPIGEMSLL-YISKYFKESRPILL 205 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + ++ + + + E A D ++PHT RHS+A ++L Sbjct: 206 KDKESPYLFLNDHGHRISRQGIFKLVKEIAIKAGID-----KDISPHTLRHSFATNLLEN 260 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+++Q L+GH IS+T++YT V + ++ Sbjct: 261 GADLRIVQELLGHSDISTTQIYTHVSQKHIREQYN 295 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 30/215 (13%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 LP+ L EV+ LL + +L + G R++E + ++ D L Sbjct: 118 PQRWRTLPEVLSVDEVTRLLAAPGLDERLAFRDRAMLELAYGAGLRVSEWIGMSVKDVML 177 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 R+ RLVP+ S + + + +L+ +ER Sbjct: 178 EDSLV-------------------RVLGKGNKERLVPIGRS-AIGAVAVYLRELRPVLER 217 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + R ++ + + V A + PV+PHT RHS+A H+L G Sbjct: 218 GGGKGILFLNGRGAPLSRMGAWKLVRKYVGMAGIE-----KPVSPHTLRHSFATHLLEGG 272 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 L+ +Q ++GH I++T++YT V + + HR Sbjct: 273 ADLRAVQEMLGHADIATTQIYTHVDREYLRSVHRQ 307 >UniRef50_C8QGI0 Integrase family protein n=2 Tax=Pantoea sp. At-9b RepID=C8QGI0_9ENTR Length = 239 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 104/244 (42%), Positives = 141/244 (57%), Gaps = 38/244 (15%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP-------Y 100 +P+YLLAPEV+ LL V DL +++ + LWNTG R+NE L LTR DF L P Sbjct: 1 MPRYLLAPEVAVLLAKVTDLRKRLFIDALWNTGGRLNEILPLTREDFVLDDPLTGAPLSS 60 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTH------------------RLVPLSDSWYVSQ 142 PFV L TLKQR + A G+ T R VPL+D +V + Sbjct: 61 PFVVLRTLKQRGLEEAARNRSRRRGRPTKEEQQAEREAEAEIRDNPPRAVPLTDPGFVQR 120 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEV-TDRTVRTWIGEAVAAAAADGVTFSV-PVT 200 L+ A + P AR+W++ ++ T R+WI +AVAAA DGVTFS+ PVT Sbjct: 121 LREWFATVNPP-----------AGARLWDIRSEDTARSWISQAVAAAERDGVTFSIRPVT 169 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDA 260 P TFR S+AMH++ +P KV+Q+LMGHK STE YT+VFALDV + V+F+M ++A Sbjct: 170 PKTFRDSFAMHLVQHQVPQKVIQTLMGHKDAKSTEWYTRVFALDVTRQLGVRFSMDPAEA 229 Query: 261 VAML 264 ++L Sbjct: 230 RSLL 233 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 32/218 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + LP L E++ LL L + +L TL+ TG R++E + L D Sbjct: 103 DLPKKERRLPVALNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQDL 162 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 V K RL+P+S S + ++ +++ P+ Sbjct: 163 HEDLGLVRVLGKGSK-------------------ERLIPIS-SVALHWIKQYQKEVRDPL 202 Query: 155 ERR--NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + +R ++T + + I + +A + VTPHT RH++A H+ Sbjct: 203 ILKAGQNDEHIFLNSRAKQLTRQAIWQMIKKYCQSAG-----ITKDVTPHTLRHTFATHL 257 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L G L+V+Q ++GH IS+T++YT + + ++ Sbjct: 258 LENGADLRVVQEILGHSDISTTQIYTNLSQKHILQVYQ 295 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 28/220 (12%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALT 90 + + + + LP+ L E+ ALL L + LL L+ +GARI+EA+ L Sbjct: 113 SSVKPAKLPRRLPETLSLEEMEALLAAASSPGDSNSLRDRALLEFLYASGARISEAMNLV 172 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 D V+L + R+ L LQ + ++ Sbjct: 173 LDDIDFETEPALVRL-----------------FGKGRKERISMLG-HQACQALQAYLVRV 214 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + + + GR + + A+ AAA PV PHT RH +A Sbjct: 215 RPTLAEKGQSRGRV----FLNTYGKPMSRQTAWAIIQAAAKRAQIDRPVHPHTLRHCFAT 270 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 H+L G ++V+Q L+GH S+++TE+YTKV + + Sbjct: 271 HLLQGGADIRVVQELLGHASVTTTEIYTKVSKQMLLEVYA 310 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 167 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 21/220 (9%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALAL 89 +A + LP +L E+ LL L + LL L+ TG R+ E +AL Sbjct: 137 PVAGVHTPKLERRLPVFLDEEEIGGLLSQPDTHTPLGLRDRALLELLYATGLRVGELVAL 196 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 RGD + + V K+R A + L D W V + + A+ Sbjct: 197 NRGDIDYSEGWVIVWGKGRKERAVPVGSEALQALGHY-------LRDGWPVLRARAPAAE 249 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 +P ++ + ++DR+VR + V+ A S ++PH RH++A Sbjct: 250 QSLPEAKQPLFLNKL----GGRLSDRSVRRLLDRYVSQLA-----LSRQISPHKIRHTFA 300 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 HML G L+ +Q ++GH S+S+T++YT V + + Sbjct: 301 THMLNHGADLRAVQEMLGHASLSTTQIYTHVTTQRLRTEY 340 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 95/254 (37%), Gaps = 23/254 (9%) Query: 4 SVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY 63 + IH + M+ A P++ A + LP L EV ++ Sbjct: 89 ASIHEWNKFMLSNAQIASDPSAEVKA------------PKQAEHLPDVLSISEVERVIDA 136 Query: 64 VPD--------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 L + L+ L+ TGAR++EA+ L D L + KQR Sbjct: 137 AGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFEDIDLTESVVRLSGKGQKQRLVPI 196 Query: 116 ARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDR 175 + A R + P+ S T ++LK P+ ++ + Sbjct: 197 GKCAVRALRDYLANAR-PILASRAQKSPATAKSRLKSPLNSSSKSAN--THVIFLNKRGK 253 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 ++ + A + PHT RHS+A H++ G ++ +Q L+GH S+++T+ Sbjct: 254 SLSRQSAWEAISRAGKMAKIGKELHPHTLRHSFATHLISGGADVRTVQELLGHASVTTTQ 313 Query: 236 VYTKVFALDVAARH 249 +YT + + + Sbjct: 314 IYTHISPDALMEAY 327 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 36/231 (15%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGAR 82 + +D PA L Q + +P L EV A L V + LL L+ TG R Sbjct: 117 ITVDNPAELLATQKAWQ--RMPGVLSPNEVEAFLSAVKKSDSFWQRDRALLEVLYATGCR 174 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 +E L D +L KQR +P G + R + L Y+ + Sbjct: 175 ASEVCTLRVRDLTLDEKTLRCHGKGDKQRM---------VPIGGRAIRAIQL----YLEE 221 Query: 143 LQTMVAQ---LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV 199 + ++A +I +R ++ ++W + R A S + Sbjct: 222 SRHILADRNPGQIDELFLSRGGKALDRIQLWRLVKR-------------YAKRAGISDEI 268 Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 +PH+ RHS+A H+L G L+ +Q ++GH SI +T++YT V + HR Sbjct: 269 SPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIYTHVEHSRLQRVHR 319 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 166 bits (419), Expect = 9e-40, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 30/206 (14%) Query: 48 LPKYLLAPEVSALLH-----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+ L EV LL L K + ++++G R++E +L D Y Sbjct: 100 LPESLTDTEVDDLLAVHNEKTDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGKYL- 158 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 ++ + R+VP++D + LQ + ++ M + + + Sbjct: 159 ------------------KICGKGKRERIVPIND-RALDILQRYIQTSRVIMVKGKKTSE 199 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 R +++ + + EA+ + + + PHT RHS+A H++ G L+ + Sbjct: 200 LFLNFRGDKISRVGIWKIVKEAMKKSKIE-----KNIYPHTLRHSFATHLIQHGADLRAV 254 Query: 223 QSLMGHKSISSTEVYTKVFALDVAAR 248 Q ++GH I++TE+YT V + + + Sbjct: 255 QRMLGHSDITTTEIYTHVDSAHLKKQ 280 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 29/205 (14%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LPK + EV L + +L ++ TG R++E L+L R +L Y Sbjct: 112 LPKVMSLEEVKQLFSAPDLTQPEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYVI 171 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 K RL+PL + + L+ +AQ++ P+ +N G Sbjct: 172 AYGKGAK-------------------ERLIPLG-QYAIQYLKKYLAQVR-PLFVKN---G 207 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 + + + + + + A P+TPH RHS+A HML G L+ + Sbjct: 208 KDDDSLFLTIRGTGMTRQRFWQIIRAYGVKAGLQKPLTPHILRHSFATHMLDNGADLRTV 267 Query: 223 QSLMGHKSISSTEVYTKVFALDVAA 247 Q L+GH IS+T++YT + + Sbjct: 268 QELLGHADISTTQIYTHLTNNRLKK 292 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 31/207 (14%) Query: 47 ELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LPK L EV LL + + L +L ++ +G R++E + L D + + Sbjct: 107 RLPKALEIDEVKRLLSVMLESKYYLRDIAMLELMYASGLRVSELVRLKLSDINFEAGFIR 166 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V+ K+R R + ++ V ++ + N R Sbjct: 167 VKGKGDKERVVPI------------AQRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQ 214 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 + R W+ A G V VTPH RHS+A H+L G L+ L Sbjct: 215 PMTRQRFWQ---------------NIKAIGRIAGVNVTPHMIRHSFATHLLEGGADLRSL 259 Query: 223 QSLMGHKSISSTEVYTKVFALDVAARH 249 Q ++GH IS+T++YTKV + + Sbjct: 260 QKMLGHSDISTTQIYTKVSMDRLRKEY 286 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 30/213 (14%) Query: 42 SMVHDELPKYLLAPEVSALL-----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LP++L EVS LL L K + L+ +G R++E + L + L Sbjct: 101 PRLDKRLPEFLTTAEVSKLLRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDL 160 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V K R+V + + +QT + + ++ Sbjct: 161 HSHQIRVWGKGSK-------------------ERIVLMGLP-AIQSIQTYLNLGRPLLKG 200 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + ++ R+ + + + A + V PH RH++A H+L G Sbjct: 201 KRNTPALFLNPNGGRLSARSFQERLDKLAHQAGIE-----KHVHPHMLRHTFATHLLDGG 255 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+V+Q L+GH ++S+T++YT V + Sbjct: 256 ADLRVVQELLGHSNLSTTQIYTHVTKSQARKVY 288 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 30/221 (13%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYV-PD----LHRKMLLATLWNTGARINEALAL 89 L +++ + LP++L E+ LL PD K +L L+++G R++E ++L Sbjct: 102 PLDHKELPSIQSRLPQFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSELISL 161 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 + ++ R VP+ L +A+ Sbjct: 162 KLESYY-------------------PEHFQIKVLGKGNKERAVPIG-KCAKEALDKYIAE 201 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 + + + R R +T +R I D V PH RH++A Sbjct: 202 GRTKLLAKKTRGEVFLNQRGQPLTRSRIRQLIIHYARLGGID-----KKVYPHLLRHTFA 256 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 H++ G L+V+Q L+GH +I++T++YT V + HR Sbjct: 257 SHLVENGADLRVIQELLGHANIATTQIYTHVNLKHLKEIHR 297 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 32/215 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDF 94 ++ + LP+ L EV ++ + L + LL + G RI E LT D Sbjct: 96 EIPKIPKTLPEVLTVDEVFKVIEGQENSTPTGLRNRALLELFYGAGLRIGEIAGLTLNDL 155 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 L Y V +Q R+VPL + + L+ + + Sbjct: 156 DLTQGYVRVTGKGRRQ-------------------RIVPLG-KYALDSLKLYLEAGRPAF 195 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + ++ + + +T R +R I + V A + +TPHTFRHSYA H+L Sbjct: 196 KPKSEKL--FLNQQGAGLTVRGIRYLISQIVKKAG-----LNRKITPHTFRHSYATHLLE 248 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G ++ +Q L+GHK +S+TE+YT + + + Sbjct: 249 GGADIRAVQELLGHKRLSTTEIYTHLSKERLREVY 283 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 31/218 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + LPK L +V LL L + ++ L+ TG R+ E ++L D Sbjct: 100 ETPKQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDL 159 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 L + K R++PL + L+ + + + + Sbjct: 160 HLHMGFIQTIGKGDK-------------------ERIIPLG-KTATTVLEKYLEEARPKL 199 Query: 155 ER-RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 R + R +T + + + + P+TPHT RHS+A H+L Sbjct: 200 RRPKYRNDFVFLNHHGQGLTRQGFWKILKGIAKESGIE-----KPITPHTLRHSFATHLL 254 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 G L+ +Q L+GH IS+T++YT V L + ++ Sbjct: 255 ENGADLRSVQELLGHADISTTQIYTHVTKLRLKDVYKQ 292 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 33/226 (14%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEA 86 L + +P +L E+ L + +L L+ TG R++E Sbjct: 94 KENPFLLVSLPKQDKRIPSFLYEEELKELFTVSDVSTPLGQRNQAILELLYATGMRVSEL 153 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 +L D L+ V KQ R VP S+ L T Sbjct: 154 CSLKESDLDLSMDTVLVHGKGSKQ-------------------RYVPFG-SYAHEALITY 193 Query: 147 VAQLKIPMERRNRRTGR---TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 + ++ ++ + + R +TDR VR + E + A+ ++ + PH Sbjct: 194 LEDGRLKLKAKGKDRADAYVFLNQRGAPLTDRGVRFILTELMKKASG-----TLHIHPHM 248 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 RH++A H+L G L+ +Q L+GH ++SST+VYT V + + Sbjct: 249 LRHTFATHLLNEGADLRSVQELLGHSNLSSTQVYTHVSKDSLRKTY 294 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 30/199 (15%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+ + + E+ L+ V L +L TL+ G R++E +++ + +L + Sbjct: 40 LPEVISSKEMELLIDSVDTKNPRGLRNAAMLETLYGAGLRVSELVSMKMENINLEASFI- 98 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 R+ R+VP+ S+ + +++ + + + + Sbjct: 99 ------------------RIFGKGSKERIVPIG-SFAIEKVRNWIMHGRPIILKNIPSHY 139 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 +T + + + A+ S +TPHTFRHS+A H+L G L+ + Sbjct: 140 LFVARAGKPMTRQGFWKLLKKYSRASG-----ISKKITPHTFRHSFATHLLEGGADLRSV 194 Query: 223 QSLMGHKSISSTEVYTKVF 241 Q+++GH IS+T++YT V Sbjct: 195 QTMLGHSDISTTQIYTHVS 213 >UniRef50_A2U2P8 Phage integrase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2P8_9FLAO Length = 385 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 31/204 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP L EV ++ +L + ++A L++ G RI+E + L DF + Sbjct: 183 PKKSKKLPSVLSQEEVLRIISVTTNLKHRAIIALLYSCGLRISELINLKLKDFHIERKQL 242 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V+ + R V L++S + LK + Sbjct: 243 IVK------------------SGKGRKDRYVSLAES--------FMPLLKNYYYSYEPKE 276 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 E + + +VR ++ ++ A VTPHT RHSYA H+L G+ ++ Sbjct: 277 FFVEGMNGEKYSASSVRAFLKKSCKKAG-----IQRAVTPHTLRHSYATHLLENGVDIRY 331 Query: 222 LQSLMGHKSISSTEVYTKVFALDV 245 +QSL+GH +T +YT V D+ Sbjct: 332 IQSLLGHSRPETTMIYTHVKRKDL 355 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 31/248 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + + ++ S + + +D + + + LP L EV ++L + Sbjct: 69 KTISRKLTSIKSFHKFLLMEKEVDEDVTHKIAR-PKIEKTLPTVLSVDEVISILEVIDKS 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L LL ++ +G R++E L + D + Y V K Sbjct: 128 TTLGLRNMALLELIYGSGLRVSELLNIKLKDIHMQQSYVIVTGKGSK------------- 174 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+SD ++ ++ + + + + + +T+ I R Sbjct: 175 ------ERMVPISDMAIIA-IRNYLVKARDDLIKE-----KTDYLFINNQGKTLSRVGFF 222 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + A++ V+PHT RHS+A H+L G+ L+ LQ+L+GH+ IS+T++YT + Sbjct: 223 KVLKKLASEANLDPEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHISQ 282 Query: 243 LDVAARHR 250 + + Sbjct: 283 SRLKQVYN 290 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 33/217 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD--------LHRKMLLATLWNTGARINEALALTRGD 93 + LP L E++ LL L K +L L+ TG R++E L L+R + Sbjct: 107 PKLARYLPSVLTIEEMATLLDAPLKRHPTSTFMLRDKAMLEFLYATGVRVSELLGLSRLN 166 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 + + V K RLVP+ + +S ++ + +L+ Sbjct: 167 LHMDDGFVRVFGKGSK-------------------ERLVPVGQT-AISWMKRYLDELRPG 206 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 M +R ++ + E A + P++PHTFRHS+A H+L Sbjct: 207 MMSATSHDTIFLNSRGGPLSRMAAWNIVREHAVIAGIE-----KPISPHTFRHSFATHLL 261 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+V+Q ++GH SI +T++YT + + H+ Sbjct: 262 EGGADLRVVQEMLGHSSIIATQIYTHIDRSFIKEVHK 298 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 29/221 (13%) Query: 26 LPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTG 80 L I +L + +LP L PE+ +L + + + +L TL++ G Sbjct: 88 LMEEIRDEDPSSLIDSPKLGRKLPDTLSFPEIEQILLAIDLSTPEGMRNRAMLETLYSCG 147 Query: 81 ARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYV 140 R++E L + + V K+R +P G+ + + + + Sbjct: 148 LRVSELTDLKISNLFFDDGFVKVLGKGNKER---------LVPIGRDARKYIGMYRNEVR 198 Query: 141 SQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVT 200 L + + NRR + + ++ + A + V+ Sbjct: 199 CHLD--IVKGAENYVFLNRRGNKLSRVMVFTI-------------IKNLAVKIGLKKTVS 243 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 PHTFRHS+A H++ G L+ +Q ++GH+SI++TE+YT + Sbjct: 244 PHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLD 284 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 29/223 (13%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEAL 87 V++D P + ++ L A +V L + K +L L+ TGAR++E Sbjct: 96 VSLDSPKLWKKLPYVVPIHKIEDLLSAADVKTKL----GIRNKAILELLYATGARVSEVA 151 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 ++ +L Y + R+VPL ++ +Q + Sbjct: 152 TISLNGINLEYGYI-------------------KCKGKGSKERIVPLGKKASIA-IQEYL 191 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 ++ + + + T R +R + A + ++PH RHS Sbjct: 192 TTVRPQI-----KDSQNSHYLFLSRTGRPLRRENIWLIVKNCALKAGITEAISPHKLRHS 246 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 +A H+L G L+ +Q ++GH SIS+T++YT V + A H+ Sbjct: 247 FATHLLENGADLRAVQEMLGHVSISTTQIYTHVNKQHLKAIHQ 289 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 25/218 (11%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRG 92 AL +LP++L EV L++ D L K +L + +G R+ E L Sbjct: 97 ALLATPKKERKLPEFLSIEEVEMLINAPGDDPFGLRDKAILEVFYCSGIRLGELWGLDLQ 156 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 + L Y ++ RL PL S+ ++ ++ + + Sbjct: 157 NLDLQTGYL-------------------KVTGKGNIERLAPLG-SFALAAIEDYLYNARP 196 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + ++N+ + + + R + I V V+PH+ RHS+A H+ Sbjct: 197 ELLKKNKSVENCDALFLNKFGTRISQRSIRRRVKK-YVQQTASEHRVSPHSLRHSFATHL 255 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L G L+ +Q L+GH +IS+T++YT V + + Sbjct: 256 LEGGADLRAVQELLGHVNISTTQIYTHVNQARMTEVYN 293 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 164 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 83/220 (37%), Gaps = 45/220 (20%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LPK L +V AL++ L + + L+ G R++E L L +L Sbjct: 113 PKIGRALPKDLSEQDVEALINAPDISTTLGLRDRAMFEVLYACGLRVSELLNLRLELINL 172 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + R+ RLVPL + ++ +A+ + + + Sbjct: 173 KQGFV-------------------RITGKGNKERLVPLG-QYACDWIEKYLAESRPQLYK 212 Query: 157 RN-------RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 N + G + W A ++PHT RH++A Sbjct: 213 SNTDYLFLTQHGGIMSRQNFW-------------YAIKRYALQANIQAELSPHTLRHAFA 259 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L G L+V+Q L+GH +S+T++YT V + A H Sbjct: 260 THLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQALH 299 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 31/209 (14%) Query: 48 LPKYLLAPEVSALLHYVP-------DLHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 LP +L EV A L P ++ + +L L+++G R++E L Sbjct: 108 LPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVSELARLPLTAVDFDNEL 167 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 V K R+VP+ + L+ +A ++ + +N R Sbjct: 168 LRVVGKGSK-------------------TRIVPIG-KVALRTLRRYLADVRPLLAEKNPR 207 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 + R + V AA + PHT RHS+A H+L G L+ Sbjct: 208 ----SPYVFLSKSGRPLNREWIWNVVKVAAARAGIHKNIHPHTLRHSFASHLLAHGADLR 263 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAARH 249 V+Q ++GH IS+TE+YT + + +AA H Sbjct: 264 VIQEMLGHADISTTEIYTHIDSNRLAAIH 292 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 20/215 (9%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + +LP +L E+ LL P L + +L TL++ G R++E + + D Sbjct: 101 RNPRKDRKLPHFLAGDELGKLLEAPPADDPAGLRDRAMLETLYSAGLRVSELVGMNDEDL 160 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 L ++ K+R A R HR V+ + Sbjct: 161 DLDEGVVRIRGKGSKERLAPLGSFALRAIKKWLAHR----------KLASISVSSTRKSA 210 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + T +T R+V + + + D + TPHT RH++A H+L Sbjct: 211 SKAGHGTPVFTNKFGKRLTTRSVARMLEKYLKLTGLD-----LRTTPHTLRHTFATHLLD 265 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G ++ +Q L+GHKS+ +T++YT V + A + Sbjct: 266 RGADIRSVQELLGHKSLVTTQIYTHVSTAALKAVY 300 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 31/229 (13%) Query: 36 LALRQMSMVHDELPKYLLAPEVSAL-----LHYVPDLHRKMLLATLWNTGARINEALALT 90 L M ELP L +++ L + V + ++++ L+++G R +E ++L+ Sbjct: 105 LIYVNMPKFEKELPTVLTKDDINKLRNVIDISKVTGIRDRLIIEFLYSSGLRSSELVSLS 164 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 +L V K+R + A + Y+S + Sbjct: 165 ELMINLEEREVRVLGKGNKERVTFFSENARKWYEK-------------YISAKRNEYKNY 211 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + N R R +T R++R I + A + VTPH FRHS+A Sbjct: 212 TPNIVFVNSRGER--------ITTRSLRRLIADYAEKAG-----INKEVTPHVFRHSFAT 258 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 +L + ++ LQ L+GH SIS+T+VYT V + + + + D Sbjct: 259 TLLNNKVDIRYLQELLGHSSISTTQVYTHVSKALLREIYIKAHPLADED 307 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 37/220 (16%) Query: 48 LPKYLLAPEVSALLHYVPD--------LHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 +PK L EV+A+L P+ + + LL L++TGAR++E L L D Sbjct: 113 IPKALSIAEVTAILESCPNDDAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPTEK 172 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 V+ K R+VP+ D + LQ + +++ ++ Sbjct: 173 LIIVRGKGSK-------------------ERVVPVGDP-ALDALQHYLVRVRPAFNKKGS 212 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 + + ++ + A G V+PH+FRHS+A H+L G + Sbjct: 213 AALFLNRNGG-RMGRQSAFNMVSSVSEKAGVAG------VSPHSFRHSFATHLLEGGADI 265 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 +V+Q L+GH ++ +T++YTKV + R + P S+ Sbjct: 266 RVVQELLGHSNVVTTQIYTKVSPDHL--REAWSESHPRSN 303 >UniRef50_Q46776 Resolvase n=16 Tax=root RepID=Q46776_ECOLX Length = 178 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 88/204 (43%), Positives = 112/204 (54%), Gaps = 30/204 (14%) Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 +PD ML AT+WNTG RI EA LT F L PFV++ + K Sbjct: 1 MPDQRHHMLFATMWNTGIRIGEARTLTPESFDLDGLRPFVRVLSEKV------------- 47 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RLVPL+D +V Q+++ + + + +W VTD T+R W+ + Sbjct: 48 ------RLVPLTDVSFVRQMESWMVTTRP-----------RRREPLWPVTDETMRNWLKQ 90 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 AV A ADGV FS+PVTPHTFRHSY MHMLY P KV+Q+L GHK S EVYT+VFAL Sbjct: 91 AVKRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHKDPRSMEVYTRVFAL 150 Query: 244 DVAARHRVQFAMPESDAVAMLKQL 267 D+AA V F DA +L+ L Sbjct: 151 DMAATLAVPFTGDGHDAAQILRTL 174 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 33/229 (14%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARI 83 + + + +LP +L E++ LL +PDL + LL L++TG R+ Sbjct: 93 LTDKNPFTKVKTPKLEKKLPVFLEEFEMNHLLE-LPDLSTELGQRDRALLEFLYSTGCRV 151 Query: 84 NEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL 143 +E + LT L+ Y + K R+VPL + Sbjct: 152 SELVGLTLTRLDLSNRYALLLGKGHK-------------------ERIVPLGHPCIRAMN 192 Query: 144 QTMVAQLKIPMERR--NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 + ++ ME+ R +T R+VR + V A + V+P Sbjct: 193 AYLTGARRVLMEKYEVPSHDFIFVNHRGTPLTARSVRRILDRYVEMA-----SIQKHVSP 247 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 HT RH++A H+L G L+ +Q L+GH S+S+T++YT V A +A+ ++ Sbjct: 248 HTIRHTFATHLLDHGADLRSVQELLGHASLSTTQIYTHVTADRIASVYK 296 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 32/217 (14%) Query: 46 DELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 ++LP +L EV L++ +++ T+++TG RI+E + L D + Sbjct: 103 EKLPVFLNFDEVEKLINSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMDMH--- 159 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 R ++ R VP+ S +++T + + + Sbjct: 160 ----------------REIMKVTGKGSKQRFVPMYGS-LAEKMKTYLDIRHDSLVKERDE 202 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 ++ V I + A V+PHT RHS+A H+L G L+ Sbjct: 203 GWLFLSRNGKKLDREYVWMIIKKYCERAG-----IKKNVSPHTLRHSFATHLLTNGADLR 257 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPE 257 +Q L+GH +S+TE YT+V D AR+ + P Sbjct: 258 TIQVLLGHVDLSTTERYTQVT--DNKARNTLLNCHPR 292 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 82/223 (36%), Gaps = 35/223 (15%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALAL 89 L + V P +L E+ LL + + K ++ ++ +G R +E + L Sbjct: 100 PFLLIESQKVAKRNPDFLFPEEILGLLDSIETKDDLGIRNKAMMELMYASGLRCSEVVNL 159 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD---SWYVSQLQTM 146 + F+ R VP D W + +Q Sbjct: 160 QLSNIDFNQMVLFIHGKG-------------------NKDRYVPFHDYAGEWLIKYIQEA 200 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 L I E N +T+R V + + + + PHT RH Sbjct: 201 RENLMIKNEGHN---FVFVNKFGNPLTNRGVENIVDRIMRL-----YDSTKKIHPHTIRH 252 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 S+A H+L AG ++ +Q L+GH+++S+T++YT + + + Sbjct: 253 SFATHLLNAGADIRTVQELLGHENLSTTQIYTHISRDHLKEVY 295 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 32/221 (14%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALA 88 + L Q + LP++ E++ L + +MLL L+ TG R++E Sbjct: 123 PMELVQYQVKKKTLPQFFYEQELTQLFDSLYKREDDAAWRDRMLLEVLYATGMRVSELSE 182 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L+ +L R+ R+VPL DS ++ ++ Sbjct: 183 LSLERLNLEVQLI-------------------RVLGKGNKERIVPLGDS-ATQAIRDYLS 222 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 L+ ++R N + ++ R +RT + V A ++ + PH RHS+ Sbjct: 223 HLRPKIDR-NNSPYLLLTDKGAPMSPRQIRTRLKSLVEEQA-----MNLKIYPHKLRHSF 276 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 A H+L G L+ +Q L+GH ++SST++YT V + +++ Sbjct: 277 ATHLLNKGADLRTVQELLGHANLSSTQIYTHVTKDQLRSQY 317 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 15/222 (6%) Query: 42 SMVHDELPKYLLAPEVSALLHYV--------PDLHRKMLLATLWNTGARINEALALTRGD 93 LPK L + LL L + LL L+ TGARI+E + L D Sbjct: 125 PTPARRLPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLYATGARISEVVGLDVDD 184 Query: 94 FSLAPPYPFVQLAT-----LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L P + +T + + R+ RLVP+ S+ + L+ + Sbjct: 185 IDLGPGRLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLVPVG-SFALRALEAYLV 243 Query: 149 QLKIPMERRNRRTGRTEKARIWEV-TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 + + + R G A + R R + +A AA + V+PHT RHS Sbjct: 244 RGRPVLAAAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARRAGLPASGVSPHTLRHS 303 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 +A H+L G ++ +Q L+GH S+++T++YT V + + Sbjct: 304 FATHLLEGGADVRSVQELLGHASVTTTQIYTLVTVDALREVY 345 >UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA Length = 278 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 38/211 (18%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 + + P YL E++ LL D ++++ L+ TG R++E + + + D Sbjct: 99 NNIKLDKKAPVYLTVSEMNDLLDTAIDTRDRIIVRLLYATGVRVSELVNIRKKDIDFD-- 156 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 R ++ R+V L V ++ A L Sbjct: 157 -----------------RCTIKVFGKGAKERIV-LVPETVVKEMYDYAASLSND------ 192 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 R++ +T RTV+ I + A + VTPH RHS+A HML G + Sbjct: 193 -------DRLFNLTPRTVQRDIKQLARRA-----KINKNVTPHKLRHSFATHMLQNGGNV 240 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 +Q L+GH S+++T++YT ++ + Sbjct: 241 VAIQKLLGHSSLNTTQIYTHYNVDELKEMYG 271 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 30/222 (13%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPD-------LHRKMLLATLWNTGARINEAL 87 + + + LPK L EVS LL L ++ + +G R+ E Sbjct: 135 PMKRLKSPKLGRPLPKTLSESEVSCLLSAAERRGDEPLALRNLAMVELFYASGLRVAELC 194 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 L G Y V K R+VP+ + + + + Sbjct: 195 GLDLGSVDAGLGYVRVLGKGGK-------------------ERIVPVGEQ-ALEAISRYL 234 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 Q + + RR R A R + + + + ADG ++PHT RH+ Sbjct: 235 KQGRPALARRQR---EVSPALFLNHRGRRLSVRGAQDILSRIADGAALERGISPHTLRHT 291 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 +A H+L G L+ +Q ++GH +S+T++YT V A + + Sbjct: 292 FATHLLDGGADLRSVQEMLGHAKLSTTQIYTHVSAERLKEIY 333 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 31/216 (14%) Query: 41 MSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFS 95 + LP +L E+ L +P + K ++ L+ TG R++E L + Sbjct: 104 LPKQKTRLPTFLYEEEMEHWLLALPANKPLEKRDKAIIELLYATGMRVSECSMLALDQWD 163 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 V K R VP+ VS +++ + + + + Sbjct: 164 RVSETVRVFGKGRK-------------------ERYVPVG-KMAVSAVESYIHEARPKLL 203 Query: 156 RRNRRTGRTE-KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 R N T R ++DR++R + + + AA ++PH RHS+A H+L Sbjct: 204 RANDPTSHLFLNYRGGALSDRSIRKIVEKRLDEAA-----MQKKISPHAIRHSFATHLLN 258 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 AG L+ +Q L+GH+S+ +T+VYT V + A ++ Sbjct: 259 AGADLRAVQELLGHQSLKTTQVYTHVSKERLYAVYK 294 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 27/214 (12%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSL 96 + LP L E++ L+ L K LL L+ TGARI+E L+L D + Sbjct: 163 PAMPQHLPDTLSVDEINTLIESQAGDSAVALRNKALLELLYGTGARISEVLSLAVDDITA 222 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + + T K R+VP+ S + + + + + + Sbjct: 223 LEETDGILVLTGK----------------GDKQRIVPVG-SHARQAVDAYLVRGRPQLNK 265 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 ++ ++ + +A A + ++PHT RHS+A H+L G Sbjct: 266 GKSAALFLNVRGGKAMSRQSAWQVVKQAATEAG-----ITKDISPHTLRHSFATHLLEGG 320 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 ++ +Q L+GH S+++T++YT + A + A R Sbjct: 321 ADVRSVQELLGHASVTTTQIYTHITADSLRAMWR 354 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 79/219 (36%), Gaps = 43/219 (19%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LPK L +V AL+ L + + L+ G R++E L L +L Sbjct: 113 PKIGRALPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINL 172 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD------SWYVSQLQTMVAQL 150 Y R+ RLVPL Y+++ + + + Sbjct: 173 KQGYL-------------------RITGKGNKERLVPLGQYACDWVERYLNEARPQLYKS 213 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + G + W A ++PHT RH++A Sbjct: 214 STDYLFLTQHGGIMSRQNFW-------------YAIKHYALQANIQAELSPHTLRHAFAT 260 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L G L+V+Q L+GH +S+T++YT V + + H Sbjct: 261 HLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLH 299 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 35/223 (15%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD--------LHRKMLLATLWNTGARINEALA 88 A + D LP L EV+ ++ + + LL L+ TGARI+EA+ Sbjct: 114 AQVKAPKQADYLPDVLSIEEVNRVIEAAGNFGSSDAISIRDTALLEFLYATGARISEAVG 173 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 + D L ++ RLVP+ V L+ + Sbjct: 174 VKFEDIDLNES-------------------VVKLTGKGSKQRLVPIGG-CAVRALRNYME 213 Query: 149 QLKIPMERRNRRTGRT--EKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + + + + +R T R ++ ++ + +A A D P+ PHT RH Sbjct: 214 KSRPELALKGKRELHTIFLNKRGSALSRQSAWEIVTQAGERAKLD-----KPLHPHTLRH 268 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 S A H++ G ++ +Q L+GH S+++T++YT + + + Sbjct: 269 SLATHLIAGGADVRTVQELLGHASVTTTQIYTHISPDALVEAY 311 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 29/213 (13%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LPKYL +VS LL+ +L K +L L+ TG R+ E ++LT + S+ Sbjct: 102 PKLPSRLPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTELVSLTIENMSV 161 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 R+ R+VP+ + ++ + + + Sbjct: 162 QQG-------------------VVRVIGKGNKERIVPMGEEAAY-WVRQFMLYGRPVLLN 201 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 R ++T +T + A D +PH RH++A H++ G Sbjct: 202 GQSSDVVFPSQRAQQMTRQTFWHRVKHYAILADIDADAL----SPHVLRHAFATHLVNHG 257 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+V+Q L+GH +S+T++YT V + H Sbjct: 258 ADLRVVQMLLGHTDLSTTQIYTHVAKERLKRLH 290 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 79/213 (37%), Gaps = 30/213 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 LP L E+ AL+ L + + ++ TG R++E + L L Sbjct: 99 PKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHL 158 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 A V K RLVP+S + + + + + + Sbjct: 159 AMNLLQVTGKGDK-------------------ERLVPISPQAA-DWVNRYLQESRPRLIK 198 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + +T + + + A V VTPHT RHS+A +L G Sbjct: 199 HQQPKAVFVNFHGHALTRQVIWKNL-----KAYIASVGIEKDVTPHTLRHSFATRLLENG 253 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+V+Q L+GH IS+T++YT + + A + Sbjct: 254 ADLRVVQELLGHSDISTTQIYTHLSNQHLVAVY 286 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 34/220 (15%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTR 91 L + V D LP L EV+ LL L + L L+ G R +E ++L Sbjct: 106 DLVSLPKVPDRLPDVLSVSEVNELLDQPFKDGPLGLRDQAALELLYGCGLRASELISLDL 165 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 GD A V ++R +P G R+ L + + Sbjct: 166 GDVFFAEGILRVMGKGSRERI---------VPIGGSAQRV-----------LLDYLENGR 205 Query: 152 IPMERRNRRTGR-TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP-VTPHTFRHSYA 209 + + ++ G AR ++ + + T + A G T P + PHT RHS+A Sbjct: 206 PKLAKPSKTDGAVILNARGGRLSRQALHTIVRTA-------GATIGRPDLHPHTLRHSFA 258 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 HML G L+ +Q ++GH IS+T++Y V + + Sbjct: 259 THMLEGGADLRTIQEILGHSDISTTQIYVHVDRSHIREEY 298 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 82/213 (38%), Gaps = 20/213 (9%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSL 96 LP L EV +LL + +L L+ TG R++E L L Sbjct: 133 PKGEGYLPVVLSVDEVFSLLEMPGAGDRFAARDRAILELLYATGLRVSELAGLDLAQLDL 192 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 A V K+R A R V L Q + A+ P+ Sbjct: 193 ADGMVRVVGKGNKERLVPMGTAAVAAIEAYLPQRQV-LLRQTAGQQKEGKKARGADPLL- 250 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 N R GR +T R++ + A + V+PH RHS+A H+L G Sbjct: 251 VNSRGGR--------LTSRSIERLVKMYAERAG-----IAARVSPHALRHSFATHLLEMG 297 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+V+Q L+GH S+S+T+ YT + + A + Sbjct: 298 ADLRVVQELLGHASLSTTQRYTHLNLDHLTAVY 330 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 33/227 (14%) Query: 40 QMSMVHDELPKYLLAPEVSAL-----LHYVPDLHRKMLLATLWNTGARINEALALTRGDF 94 + ++ +P++L ++ L L+ L + +L T++ G R++E +LT + Sbjct: 118 RAPKLNRTIPEFLTFDQMMTLFDSFDLNDPAALRNRAILETMYACGLRVSEVCSLTLAEL 177 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 L V KQ R+VP + + + + Sbjct: 178 DLNERILTVTGKGDKQ-------------------RIVPFYKRLRTLLTRYLRDSRALYL 218 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + R +T R V+ + +A A + P+ PH RHS+A H+L Sbjct: 219 --KEEHGFVFVSQRGAPITPRAVQLILAQAGQDAG-----LNQPLHPHILRHSFATHLLD 271 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAV 261 G+ L+ +Q L+GH S+S+T++YT V + V A P S +V Sbjct: 272 NGVDLRTVQELLGHSSLSTTQIYTHVTVDRLKQS--VDAAHPHSKSV 316 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 85/226 (37%), Gaps = 44/226 (19%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGARINEALALTR 91 A+ + +LP L EV ALL +L K +L L+ TG R++E + L Sbjct: 93 AIIEAPKGVRKLPAVLSGREVEALLSSPLDTGAQELRDKAMLELLYATGLRVSELVGLKL 152 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS-------WYVSQLQ 144 + +L+ Y K RLVP+ +S + Sbjct: 153 SEVNLSAGYLMTIGKGDK-------------------ERLVPMGESACHATGVYLQQARG 193 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 ++ + + +R G + W + A ++PHT Sbjct: 194 ELLKEKASTLLFLSRLGGGMSRQAFWNI-------------IKKRALQAGVRTSISPHTL 240 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 RHS+A H+L G L+ +Q ++GH +SST++YT V + H Sbjct: 241 RHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHVTRERMKKLHA 286 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 33/223 (14%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALAL 89 + + +LP +L E++ LL + +L L++TG R++E + L Sbjct: 107 PFTRVRTPKLEKKLPVFLEEFEINLLLRMPDCTTVLGRRDRAILEFLYSTGCRVSELVGL 166 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 T L Y + K RLVPL V+ ++ + Sbjct: 167 TLTRVDLGNRYAILLGKGRK-------------------ERLVPLGHP-CVAAMEDYLRH 206 Query: 150 LKIPMERR---NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + + + R +R ++ R+VR + + V A V+PHT RH Sbjct: 207 SRGTLMEKYQAPRHQTVFVNSRGRPLSARSVRRILDKYVEMTA-----LQKHVSPHTIRH 261 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 ++A H+L G L+ +Q L+GH S+S+T++YT V A + A + Sbjct: 262 TFATHLLDHGADLRAVQELLGHVSLSTTQIYTHVTAERLTAVY 304 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 86/220 (39%), Gaps = 31/220 (14%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--DLHRKMLLATLWNTGARINEALAL 89 Y + V LPK L EV +L +P +++ L+ G R++E L Sbjct: 80 YDEEAEKLRPPKVPKSLPKSLTREEVRKILSVIPPTKKRDRLIFLLLYGAGLRVSELCNL 139 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 + D V+ R+VP+ ++ + ++ + Sbjct: 140 KKSDVDFERSLIIVRG------------------GKGAKDRVVPIP-AFLLEGIKAYLET 180 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 E + R +++ +TV + + A + VTPH RHS+A Sbjct: 181 RDDDSEY---LIVEDRRERKDKLSPKTVWYLLKKYGDRAG-------IRVTPHMLRHSFA 230 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 HML G+ ++ +Q L+GH ++S+T++YTKV + Sbjct: 231 THMLENGVDIRAIQELLGHSNLSTTQIYTKVTVEHLRKAQ 270 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 161 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 31/224 (13%) Query: 31 DYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINE 85 D PA + + + K + ALL + ++ ++ TG R++E Sbjct: 103 DNPA--RMLKFPKKEQKAFKVFNIDSIIALLDAPDKDKPAGMRDALIQELMYGTGVRVSE 160 Query: 86 ALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQT 145 + L D V+ + R+VP++D Sbjct: 161 LVGLNLSDIDFGGMRILVRGKG-------------------KKERIVPIADMHIEMINDY 201 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 + ++ I +TDR+VR + + + A + +PH+FR Sbjct: 202 LDVKMDICNGYLPDNEAIFINKFGSRLTDRSVRRIVEKYLKIAG-----LPMDFSPHSFR 256 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 HSYA H+L G L+ +QSL+GH+S+++T+ YT + ++ + Sbjct: 257 HSYATHLLEGGADLRTIQSLLGHESLTTTQKYTHLNLTELLRVY 300 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 30/205 (14%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +PKYL E+ ++ L + ++ L+ +G R++E L GD L Sbjct: 114 IPKYLNLEEIERIIQAPDLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLDLEYQVL- 172 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 R RLVP+ + ++ ++ + + + + Sbjct: 173 ------------------RTTGKGNKQRLVPVGKAAVLA-VRAYLESGRPGLLKGRASRY 213 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 AR +T + + AA +TPH RHS+A H+L G L+ + Sbjct: 214 LFVTARGGCMTRQGFWKLL-----AAYGRKAGIFHGLTPHVLRHSFATHLLEGGADLRSV 268 Query: 223 QSLMGHKSISSTEVYTKVFALDVAA 247 Q ++GH IS+T++YT V + A Sbjct: 269 QVMLGHADISTTQIYTHVMRSRLRA 293 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 32/225 (14%) Query: 24 ASLPVAIDYPAA--LALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATL 76 + DY A L + +LP+ + E+ L+ + + +L TL Sbjct: 86 YRFLIMEDYLKADPTELLESPQTGFKLPEVMTVEEIDLLIGSIDRSTKEGQRNRAILETL 145 Query: 77 WNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD 136 ++ G R++E L + + V+ KQ RLVP+S Sbjct: 146 YSCGLRVSELCNLKLSELYFEEGFIKVEGKGSKQ-------------------RLVPIS- 185 Query: 137 SWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFS 196 + +++ + + ++ V I E A + Sbjct: 186 PRAIKEIRLYFTDRNLMKIKPGFEDFVFISNFGKNISRIMVFHIIKELAAR-----IGLK 240 Query: 197 VPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 ++PHTFRHS+A H+L G L+ +Q ++GH+SI +TE+YT + Sbjct: 241 KKISPHTFRHSFATHLLEGGANLRAIQCMLGHESIGTTEIYTHID 285 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 31/216 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP------DLHRKMLLATLWNTGARINEALALTRGD 93 +M LP L VS LL + + LL ++ G R++E + Sbjct: 98 EMPRQGLSLPHVLDQKTVSNLLESIDIQDIPLGCRDRALLEMIYACGMRVSEIINCKLES 157 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 F + R+ RLVP+ S + LQ + + + Sbjct: 158 FDKDEAFV-------------------RVLGKGNKTRLVPVGRS-ALDALQMYLEKGRPK 197 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + R ++ R +T +R + E AA + V PH RHS+A H+L Sbjct: 198 LVRTGTKSHIFLTVRGRPLTRERIRQILRERARAAGLE-----QHVFPHILRHSFATHLL 252 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+++Q ++GH IS+T++YT + + + H Sbjct: 253 ENGADLRIIQEMLGHADISTTQIYTHLEQQRLNSIH 288 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 86/226 (38%), Gaps = 30/226 (13%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARIN 84 + L L + LP++L +V+ALL L +L L+ G R++ Sbjct: 89 LTRSNPLRLIDIPKAGTRLPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVS 148 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 E + L L + R+ R+VP S + Sbjct: 149 ELVGLKTEQVDLVACFV-------------------RLFGKGSRERIVPFG-SHARQRTM 188 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 + + M ++N +T + + + G S+ V+PHT Sbjct: 189 EWLEWGRPWMLKKNASRYLFVARAGNPMTRQGFWKLLKKYAL-----GAGISIKVSPHTL 243 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 RHS+A H+L G L+ +Q+++GH I+ST++YT V + H+ Sbjct: 244 RHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHVSRQYLVDMHK 289 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 34/211 (16%) Query: 48 LPKYLLAPEVSALLHYVP--------DLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 LP L +V+ L+ P L + ++ L+ TG RI+EAL L Sbjct: 136 LPHALTVEQVNRLIEACPVNESSNPIALRDRAVIELLYGTGMRISEALNLDIDSIDRNHA 195 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 Y V K RLVP+ + + + + + M +R+ Sbjct: 196 YVRVVGKGRK-------------------ERLVPIGAP-ALHAIDAWLVRGRPSMVKRSD 235 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 + AR + ++V ++ AAA+ V PHT RHSYA H+L G + Sbjct: 236 K-ALFLNARGNRLGRQSVWKFLH-----AAAERCGLGDSVGPHTLRHSYATHLLQGGADI 289 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 + +Q L+GH S+++T++YT V ++ + Sbjct: 290 RAVQELLGHASVTTTQIYTAVSIDNLREVYA 320 >UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM Length = 300 Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 31/250 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S M+ +++S S +L + M LP YL EV + D Sbjct: 69 SSLNRMIASIHSFHLQISTMHPEIKDVSLLIHGMKSS-KHLPVYLSVDEVKKVFSSFQDN 127 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + K +L L++ G R++E L D L V+ K Sbjct: 128 EIDQYNKTILVVLYSCGLRVSELCDLKLNDVHLTEQILKVKGKGDK-------------- 173 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R++P+S S+ VSQ++ + ++ + +N + + R ++ Sbjct: 174 -----ERIIPIS-SYCVSQMKYYLDSIRFVWDVKN-----VSYFFVNRLGHICTRQYVH- 221 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 + + + + ++ H+FRHS+A H+L L+++Q L+GH +IS+T++YT + Sbjct: 222 LMIKQKVNELNLNPKISAHSFRHSFATHLLDGDADLRIVQELLGHSNISTTQIYTHIQDK 281 Query: 244 DVAARHRVQF 253 +++ + F Sbjct: 282 RLSSVYDRCF 291 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 81/225 (36%), Gaps = 31/225 (13%) Query: 31 DYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINE 85 D PA L + +LP L E+ +L +P+ + +++ G R+ E Sbjct: 93 DNPAQL--LDTPKIPRKLPNVLTIQEIDKILGIIPENAPMAQRDLAIFEMMYSCGLRVTE 150 Query: 86 ALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQT 145 D VQ KQ R VP+ L+ Sbjct: 151 LCDFKTSDILWDSEMIRVQGKGSKQ-------------------RFVPIG-PIARENLKN 190 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 + + + +N +R R + + + + V+PHT R Sbjct: 191 YLNHERNTLADKNPNVAEVFLSR----NGRKLTRMMIWVLLKKWTESAEVKKEVSPHTLR 246 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 HS+A H+L G L+ +Q ++GH I++T+VYT + + HR Sbjct: 247 HSFATHLLEGGADLRSVQEMLGHTDITTTQVYTHLDKEHLKEVHR 291 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 33/215 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFS 95 LPK EV LL +PD + K +L TL+++G RI+E + D Sbjct: 103 PKYEVPLPKCFTEEEVRTLL-SIPDTDSPFGIRNKAILETLYSSGLRISELAGIRLQDID 161 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L R R+ R+VPL S+ + + + +++ Sbjct: 162 LK-------------------RGLVRVTGKGNKQRIVPLG-SYAIEAINNYL-KVRPQFM 200 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 R N + + T + + + V + +PH+ RHS+A H+L Sbjct: 201 RENS-----PDLLFLTKSGKAFDTKQLDIILKRYFELVAKAKGYSPHSLRHSFATHLLSR 255 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+ +Q L+GH +S+TE YT + D+ ++ Sbjct: 256 GADLRAIQELLGHSLLSTTETYTHISLEDIKEAYK 290 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 34/225 (15%) Query: 38 LRQMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTRG 92 L + +LP L E+ ++ + + +L T+++ G R++E L Sbjct: 117 LLEAPKTKRQLPDVLSFEEIEQIIGQIKAGTPEGQRNRAILETMYSCGLRVSEVTNLQIS 176 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 + V K RLVP+ S V + ++++ Sbjct: 177 QLHFDAGFIRVVGKGDK-------------------ERLVPIG-SDAVKYINIYKDEVRV 216 Query: 153 PME-RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 + ++ + R +T + I E AAA D V+PHTFRHS+A H Sbjct: 217 HVPVKKGQEDILFLNRRGSALTRVMIFLVIKELTAAAGID-----KQVSPHTFRHSFATH 271 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKV---FALDVAARHRVQF 253 ++ G L+ +Q ++GH+SI++TE+YT + + D R +F Sbjct: 272 LVEGGADLRAVQEMLGHESITTTEIYTHLDREYLRDTLQRFHPRF 316 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 85/215 (39%), Gaps = 29/215 (13%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTR 91 L + + LP L +V ++ + + ++ L+ G R++E + L Sbjct: 100 TLLESPKLGLYLPDTLSFEDVERIIKAINISTDLGRRNQCMIEVLYGCGLRVSELIDLKI 159 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 + + Y V K R VPL+ ++ ++ + +++ Sbjct: 160 SNINFKELYLKVDGKGDK-------------------SRFVPLA-TYTAKLIKEYIQEIR 199 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 + + + E + I + + + ++PHTFRHS+A H Sbjct: 200 ----SKYKINKKCEDVLFLNSRGSAMSRVIVFIIIKELTEKAGINKKISPHTFRHSFATH 255 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 +L G L+ +Q ++GH SI++TE+YT + ++ Sbjct: 256 LLQNGADLRYIQEMLGHSSITTTEIYTHLKNEELR 290 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 82/215 (38%), Gaps = 30/215 (13%) Query: 40 QMSMVHDELPKYLLAPEVSALLH-----YVPDLHRKMLLATLWNTGARINEALALTRGDF 94 + LP+ + +V LL L + LL L+ +G R++E + + Sbjct: 118 PLPRTERYLPETMNELQVDRLLEGISIDAPRGLRDRALLELLYASGLRVSELVNARLENL 177 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 L R+ RLVP+ ++ + + + M Sbjct: 178 DLDAR-------------------IIRVTGKGNKMRLVPVGQK-ACDAIRAYLEKERPEM 217 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + + +R ++T + + A D + V PH RHS+A H+L Sbjct: 218 VGKKTGSEVFLSSRGTKLTTVRIWQIVKACAKNAGLD-----INVYPHLLRHSFATHLLS 272 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+++Q ++GH IS+T++YT V + A H Sbjct: 273 NGADLRIIQEMLGHADISTTQIYTHVDQQRLKAVH 307 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 159 bits (402), Expect = 8e-38, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 32/226 (14%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEA 86 + + + LP++ E+ AL V DL + LL L+ +G R++E Sbjct: 95 KENPFSYVHLKKKNLRLPRFFYENEMQALFDSVAGDSPLDLRNRALLEVLYGSGIRLSEC 154 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 +L+ D + R PL S+ LQ Sbjct: 155 SSLSVSDIDFDSEVMLIHGKG-------------------NKERYAPLG-SFAQDALQEY 194 Query: 147 VAQLKIPM--ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 + + + + +T + + + + ++ D + PH Sbjct: 195 FREGRQVLMTKYHEEHDIVFVNHHGKPITPTGIEYVLNQMIKKSSLD-----SDIHPHML 249 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 RH++A H+L G L+ +Q L+GH ++S+T++Y V + +R Sbjct: 250 RHTFATHLLNNGADLRTVQELLGHANLSTTQIYAHVTKESLQKNYR 295 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 33/216 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LPK L +V +LL L K +L L+ G R++E + L+ +L Sbjct: 115 PKIGRSLPKDLSENDVESLLSAPDTSTALGLRDKAMLEVLYACGLRVSELMNLSLEQVNL 174 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + ++ RLVPL + + L + + + Sbjct: 175 NAGWL-------------------QITGKGNKTRLVPLGE-YASDALDDYLTHARGELVA 214 Query: 157 RNRRTG---RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + + +T + I + A ++PHT RH++A H+L Sbjct: 215 HLKSGNCQAVFLTTQGGYMTRQNFWYMIKKYAKQAG-----IQSDLSPHTLRHAFATHLL 269 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+ +Q L+GH +S+T++YT V + H Sbjct: 270 NHGADLRSVQLLLGHSDLSTTQIYTHVATARLQQLH 305 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 81/213 (38%), Gaps = 36/213 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + +P++L E+ LL + D + + ++TG R++E L GD Sbjct: 109 PKLPRSIPQFLTVDELFTLLDSIKTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDR 168 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V+ RLVP+ D + + + Sbjct: 169 ESHLVRVRGKG-------------------NRERLVPVGD-RALKAVDDYRTCI------ 202 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +D ++R + V A VPV+PHT RHS+A HML AG Sbjct: 203 DGEFGALFLNRDAHRFSDSSIRRVLSVLVKACG-----LGVPVSPHTLRHSFATHMLDAG 257 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q ++GH S+SST++YT V + + Sbjct: 258 ADLRGIQEILGHASLSSTQIYTHVTYARLMEVY 290 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 40/250 (16%) Query: 20 AGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP----DLHRKMLLAT 75 AGQ S PVA L LP L E+ LL L + +L T Sbjct: 94 AGQVQSSPVA--------LLSGPRREKRLPGCLSHAEMEKLLSIPATTPLGLRDRAILET 145 Query: 76 LWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS 135 L+ +G R+ E + + + D L Y V + R+VPL Sbjct: 146 LYASGIRVAELVGMDQDDLDLVAGYARVLGKGRR-------------------ERVVPLG 186 Query: 136 DSWYVSQLQTMVAQLKIPMERR---NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADG 192 + V L+ + + + + R +T R VR + V AA Sbjct: 187 R-YAVKALENYLHRARPELAARRIPPEPRALFLNHLGGRLTTRGVRERLSHYVEKAA--- 242 Query: 193 VTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 V+PHT RH++A H+L G L+V+Q L+GH +++T++YT + + +R Sbjct: 243 --LRRGVSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYTHISQSQLREVYRQF 300 Query: 253 FAMPESDAVA 262 D + Sbjct: 301 HPRASRDNID 310 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 80/240 (33%), Gaps = 42/240 (17%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP----------------DLHRKMLL 73 + A+ + D LP L + L+ V L +L Sbjct: 90 VTNANPAAMLMTPKIPDTLPAVLSESQAEKLMDCVDEQMPKSRTKSVRKQAVGLRNAAML 149 Query: 74 ATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVP 133 L+ TG R+ E + L D + ++ R+VP Sbjct: 150 EVLYATGIRVAELVGLDVHDVAFDNRTM-------------------KVTGKGNKQRVVP 190 Query: 134 LSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGV 193 ++ + + + R A+ + R VR + E A Sbjct: 191 FGVP-AEQSIRRWLEDGRPRLVRARSADALFLGAQGNRIDQRVVRQVVHECAQRAGV--- 246 Query: 194 TFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 ++PH RHS A H+L G L+ +Q L+GH S+ +T+ YT V + AR+ F Sbjct: 247 ---PDISPHALRHSAATHLLDGGADLRQVQELLGHSSLKTTQRYTHVSIEQLKARYGQAF 303 >UniRef50_B2VB47 Putative integrases, DNA breaking-rejoining enzymes n=1 Tax=Erwinia tasmaniensis RepID=B2VB47_ERWT9 Length = 309 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 96/298 (32%), Positives = 134/298 (44%), Gaps = 56/298 (18%) Query: 18 YSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLW 77 + S P A L +R ++ + +YLL EVSAL+ Y +K+L LW Sbjct: 3 LTPKNIFSGPDARTLSCQLRMRSLAASMEGGVRYLLPVEVSALIGYAGSHEQKILFRLLW 62 Query: 78 NTGARINEALALTRGDFSLAPPYPFVQLATL---------KQRTEKAARTAGRMP----- 123 NTG R++EALALT D L + K R + R +G P Sbjct: 63 NTGMRVSEALALTARDCILTQDDEVRLMRRRGARKSDAVTKGRPDGPLRDSGGSPLLPQV 122 Query: 124 ---------------------------------AGQQTHRLVPLSDSWYVSQLQTMVAQL 150 A RL+PL D + + L++ + Sbjct: 123 IPDDSYQAAVLVRSLKRHCGSATRGKPTEAERRAENAAKRLIPLLDPAFAADLKSYRDGV 182 Query: 151 KIPMERRNRRTGRTEKARIWEVTDR-TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 R R +W V+ R +V WI AV AAADGV FSVPV+PHTFRHSYA Sbjct: 183 LFGPVR------RALDEPLWTVSSRQSVLNWINAAVTRAAADGVQFSVPVSPHTFRHSYA 236 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVAMLKQL 267 M+ML AG+ ++L +LMGH+S+ + +YT+VFALD + + F P DA +LK + Sbjct: 237 MYMLNAGVTDRLLMALMGHRSLKTLGIYTRVFALDRLSGSYLPFDCP--DARDLLKNV 292 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 38/215 (17%) Query: 39 RQMSMVHDELPKYLLAPEVSALLHYVPD---------LHRKMLLATLWNTGARINEALAL 89 + LPK L EV ALL V L + LL L++TG+RI+EA+ L Sbjct: 110 VRPPTPGRRLPKSLTVDEVLALLESVGGESRADGPLVLRNRALLELLYSTGSRISEAVGL 169 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D +Q KQR R A V D++ V + + Sbjct: 170 DVDDVDTQARTVLLQGKGGKQRLVPVGRPA------------VQALDAYLVRGRSDLARR 217 Query: 150 ----LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 L P N R GR + W+V AA+ + V+PH R Sbjct: 218 GPGMLATPAIFLNARGGRLSRQSAWQVLQD-------------AAEHAGITSGVSPHMLR 264 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 HS+A H+L G ++V+Q LMGH S+++T++YT V Sbjct: 265 HSFATHLLEGGADIRVVQELMGHASVTTTQIYTLV 299 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 30/213 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 +LP +L ++ LL P L + +L TL++ G R++E +AL D+ Sbjct: 114 PRTGRKLPHFLTTDQIGTLLEAPPANQKMGLRDRAILETLYSAGLRVSELVALNVSDWDQ 173 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 R+ + R+ P+ S+ L + + + Sbjct: 174 DAN-------------------IIRVLGKGRKERIAPIG-SFAAKALTHWLEEREAKPGA 213 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +T R+V + + + D +PHT RH++A H+L G Sbjct: 214 HPDSDALFLNRLKTRLTSRSVGRMLEKYLLQTGLD-----KKTSPHTLRHTFATHLLDGG 268 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q L+GHKS+++T++YT V + + Sbjct: 269 ADLRSVQELLGHKSLTTTQIYTHVSTKRLLETY 301 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 89/213 (41%), Gaps = 29/213 (13%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP----DLHRKMLLATLWNTGARINEALALTRGDFSLA 97 + ++P+ L E+S LL + P ++ +L + G R++E ++L +L Sbjct: 98 PKLTQKIPETLTKEEISRLLSFPPKTFAEIRTLTILELFYACGLRVSELVSLRIESVNLK 157 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 + KQ R +P+ D V L+ +++ + ++ + Sbjct: 158 DKWVLAYGKGAKQ-------------------RFIPIHD-RAVKVLEIYLSEREKYLKGK 197 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 + +++ +V + + A + + PH FRH++A H+L G Sbjct: 198 ESASEIFINKNGKKISRMSVWKDVNDLGRLAGIE-----RSLHPHLFRHTFATHLLIGGA 252 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ LQ ++GH + +T++YT + + +H+ Sbjct: 253 DLRSLQEMLGHADLQTTQIYTHLDVQSLKEKHK 285 >UniRef50_C2G1Y8 Possible tyrosine recombinase n=3 Tax=Bacteroidetes RepID=C2G1Y8_9SPHI Length = 301 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 31/215 (14%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 +D L +LPK+ EV +L +L K +L T+++ G R++E L L Sbjct: 107 LDKKIQLDYLYPKRSFSKLPKFFSKEEVRNILDNTQNLKHKAILMTIYSCGLRLSELLNL 166 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D + + + R+V L D ++A Sbjct: 167 KIKDIKSSDGIIRIH------------------QSKGNKDRIVSLPDK--------LLAT 200 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 L+ + + E R + ++R+V+ + +A+ A + HT RHSYA Sbjct: 201 LRHYYQAFKPKEYLFEGERGGKYSERSVQLILKKALIKANVQSEG-----SVHTLRHSYA 255 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 H++ +GI +++++ L+GH++I +T +YT + +D Sbjct: 256 THLIQSGIDIRIVKELLGHENIKTTMIYTHITDID 290 >UniRef50_A0LZY5 Phage integrase family protein n=3 Tax=Bacteria RepID=A0LZY5_GRAFK Length = 385 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 31/198 (15%) Query: 48 LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 LP L E+ LL +L + +LA ++++G R+ E + L D + ++ Sbjct: 186 LPTVLSKEEIIDLLRLTRNLKHRCILALIYSSGLRVGELINLHLKDIDIDRKQILIK--- 242 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKA 167 A + R V L++S + L ++ + TE Sbjct: 243 ---------------QAKGRKDRYVMLAES--------FLPLLYNYLQTYEPKRYFTEGY 279 Query: 168 RIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 227 + + +R+++ ++ A S VTPHT RHS+A HML G L+ +Q L+G Sbjct: 280 DNKKYSSSAIRSFLKDSCRRA-----KISKKVTPHTLRHSFATHMLENGTDLRYIQELLG 334 Query: 228 HKSISSTEVYTKVFALDV 245 H +T +YT V D+ Sbjct: 335 HSKPETTMIYTHVAKKDL 352 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 29/211 (13%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + + LP+ + +V ALL L + +L L+ G R++E + LT +L Sbjct: 102 TKIRRHLPQTMSESDVEALLSAPDVQTILGLRDRAMLELLYACGLRVSELVGLTLHQIAL 161 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 Y + K RLVP + + LQ + + + + Sbjct: 162 DVGYVQILGKGDK-------------------ERLVPFGEIAH-EWLQRYIQEARPQLLG 201 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + R ++ + + V A D S ++PHT RH++A H+L G Sbjct: 202 QKMSDYVFVSQRGAALSRQAFWYRLKVYVCAVGLD----SNKISPHTLRHAFASHLLAHG 257 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 L+ +Q L+GH +S+T++YT + + + Sbjct: 258 ADLRSIQMLLGHSDLSTTQIYTHIADQRLKS 288 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 80/218 (36%), Gaps = 30/218 (13%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTR 91 AL +P L E++ LL L + LL +++G R++E L Sbjct: 113 ALLSGPKASRRIPGTLTEEEIARLLAAPTGGDARALRDRALLELFYSSGLRVSELAGLLL 172 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 L + V K R+VP+ + L T + + Sbjct: 173 QQVDLEHGFLRVFGKGAK-------------------ERVVPIGGK-AIEALATYLTAGR 212 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 R + ++ + + + A + V PH RHS+A H Sbjct: 213 PHFVRSRTGSQLFLNKNGGPLSRVMLWMLVKKYAKRAG-----LTKNVKPHGLRHSFATH 267 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 +L G L+ +Q ++GH SIS+T++YT V + + +H Sbjct: 268 LLSGGADLRAIQEMLGHASISTTQIYTSVESQRLLEQH 305 >UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI00019772C5 Length = 334 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 26/245 (10%) Query: 14 VPAVYSAGQPASLPVAIDYPAAL---ALRQMSMVHDELPKYLLAP--EVSALLHYVPDLH 68 +P+V + Q L +D A+L + ++ HDE+P+ A E + V L Sbjct: 108 LPSVLTEAQAERLMDRVDDDASLHAASSQRYETRHDEMPRLDSAHRGEGMSQRDEVVALR 167 Query: 69 RKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQT 128 +L L+ TG R+ E + L GD + V KQ Sbjct: 168 DAAMLELLYATGIRVAELVGLDIGDVDWSHRTIRVTGKGSKQ------------------ 209 Query: 129 HRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAA 188 R+VP D L + + RR A + R + I V Sbjct: 210 -RVVPFGDP-AEKALAGWKEHGRPLILRRAGAGTLDTAALFLGMRGRRIDQRIVRDVVHR 267 Query: 189 AADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR 248 AA ++PH+ RHS A HML G L+ +Q ++GH S+ +T+ YT V + R Sbjct: 268 AARESGVP-DISPHSLRHSAATHMLDGGADLREVQEMLGHSSLRTTQRYTHVSIEQLKER 326 Query: 249 HRVQF 253 +R F Sbjct: 327 YRQAF 331 >UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2S2Y8_TREPS Length = 306 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 26/212 (12%) Query: 48 LPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 LP+ L +V+ L +P + + L ++ G R++EA++L+ D A Sbjct: 108 LPRVLSPEQVNTFLQSIPLCTPGGVRDRALFELIYAAGLRVSEAVSLSLSDIFFAERLLK 167 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V K+R P G+Q + Y+ + + K P E ++ Sbjct: 168 VTGKGNKERMA---------PFGEQACYFL----MQYIREARVRFTSAKHP-ENSEKKGA 213 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 + ++ + + + + + + HTFRHSYA H+L G+ L + Sbjct: 214 VFLNRQGGRLSRKGIWKRLQDIEIRSGVET-------HVHTFRHSYATHLLAGGVDLHSV 266 Query: 223 QSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 Q L+GH I++T+VYT V + A HR F+ Sbjct: 267 QCLLGHADIATTQVYTHVENGQLEACHRACFS 298 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 85/224 (37%), Gaps = 34/224 (15%) Query: 31 DYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEA 86 DY L + H LP+YL E+ ++ + L L+ +++ G RI+EA Sbjct: 94 DYSTESMLATPKLGH-YLPQYLTREEIDSVFESAANGKNPLRDTALIELMYSGGLRISEA 152 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 L + L + RLVPL Sbjct: 153 LGIKLSQIDLENEWLM-------------------PIGKGNKQRLVPLGSKA-------- 185 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 L+ +E T T I + + + + S V+PHTFRH Sbjct: 186 KENLRAWIEEGRPLTHPTTDNIILNAHGKPMSRMGAWKIVQ--LHTMHLSKQVSPHTFRH 243 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 S+A H L AG+ L+VLQ L+GH IS+T++YT V + HR Sbjct: 244 SFATHCLEAGMDLRVLQELLGHADISTTQIYTHVDKDFIKQEHR 287 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 32/220 (14%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLH------YVPDLHRKMLLATLWNTGARINEALALT 90 AL + + LPK L + EV LL + L +L L+ TG R++E + L Sbjct: 157 ALLDLPKIGRALPKVLSSAEVEQLLAPPAPPASILALRNHAMLHLLYATGMRVSELVKLP 216 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 + A R+ RLVP ++ + + Q Sbjct: 217 VAAVNQAG--------------------HLRILGKGSKERLVPFGEAAR-QAMAVYITQA 255 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + ++ R R +T + ++ + ++PH RHS+A Sbjct: 256 RPRLLKKRRSDFLFVTGRGTAMTRLRFWQIVRKSARERG-----IAREISPHVLRHSFAT 310 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 H+L G L+ +Q ++GH I++T++YT V + A HR Sbjct: 311 HLLEHGADLRAVQVMLGHADIATTQIYTHVDTNRLKAIHR 350 >UniRef50_B0TP43 Integron integrase n=9 Tax=Bacteria RepID=B0TP43_SHEHH Length = 320 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 11/218 (5%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 + + +LP L EVS +L + ++++ L+ +G R++E L L D LA Sbjct: 96 RYATKQRQLPIVLSTEEVSEVLCQLNG-RDQLIVQLLYGSGLRVSECLRLRIQDIDLARC 154 Query: 100 YPFVQ-LATLKQR-TEKAARTAGRMPAGQQTHRLVPLSDSWYV--SQLQTMVAQLKIPME 155 V+ K R T + + A ++PA R + + D+ Y L + + Sbjct: 155 SLTVRNGKGHKDRQTILSQKCAIKLPAYIDAARAIQIKDNTYCIGPSLPNALERKYPNAF 214 Query: 156 RRN------RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 R+ T ++ + + AAA VT HTFRHS+A Sbjct: 215 RQAGWMFVFPSTTTSDNPYTKTHCRHHLHQSVIRKALAAAVRKTHIIKRVTCHTFRHSFA 274 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 H+L AG ++ +Q L+GH +++T++YT V A Sbjct: 275 THLLQAGRDIRTIQELLGHNDVNTTQIYTHVLGQHYAG 312 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 40/224 (17%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVPDL------HRKMLLATLWNTGARINEALAL 89 L L + + +P L E+ +L +P++ K +L TL+ G R++E L Sbjct: 95 LLLMETPKLWQLIPDVLSLEEIDRIL-AIPNIQTWRGARDKAILETLYACGLRVSELCQL 153 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D T R+ R+VP+ ++ + ++ Sbjct: 154 KIYDVD---------------------DTFVRVLGKGGKERIVPIGQQ-AIAAIDGYLSF 191 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRT--VRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 R G + +T ++ + + + A + ++PHTFRH+ Sbjct: 192 ---------REGGENSRNEFLFITKKSKPLTRALVWKLVKFYARQASIFKSISPHTFRHT 242 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 +A H+L G L+V+Q ++GH SI+ST+ YT V + + + Sbjct: 243 FATHLLDHGADLRVIQDMLGHASINSTDRYTHVSQIRLQQAFQA 286 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 34/219 (15%) Query: 39 RQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGD 93 ++ LP+YL EV+AL+ +V L + LL L+ TG R++E + L GD Sbjct: 100 VRLPKRDRRLPRYLHEEEVAALIDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGD 159 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 L+ + V ++R R A R +PL D + Sbjct: 160 LDLSAGFARVLGKGGRERYVMVGRRAV-----DALRRYLPLRD-----------RMARCS 203 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 NRR GR +TDR+VR + + V + H RHS+A HML Sbjct: 204 AVFINRRGGR--------LTDRSVRRVLERRIQE-----VPGLRSIHVHGLRHSFATHML 250 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 G L+ +Q L+GH S+SST++YT +A + Sbjct: 251 NGGADLRSVQELLGHASLSSTQIYTHTSREQLARAYYAA 289 >UniRef50_C8PTU7 Integron integrase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTU7_9SPIO Length = 426 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 23/217 (10%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 + +LP L E + + +P+ + + L+ TG R+ E+L L D Sbjct: 202 AKKSKKLPAVLSREETAKIFSLLPENDYGLFIRLLYGTGMRLMESLRLRVQDIDFDKNEI 261 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQ---QTHRL-----------VPLSDSW---YVSQLQ 144 V + + + + P + R+ VPL + Y + + Sbjct: 262 TVHCGKGAKDRKTMLPVSLKFPLQKHLENVRRIHEADCKDGFGLVPLPSALAKKYPNAGK 321 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 T Q P RR + E+ R + ++ + EAV + P+ HTF Sbjct: 322 TWAWQWVFPQARRWQNKETGEQGRH-HIDPSVIQRTLHEAVLRSG-----IPKPIGCHTF 375 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 RHS+A H+L +G ++ +Q L+GH +S+T VYT V Sbjct: 376 RHSFATHLLESGYDIRTIQELLGHSDVSTTMVYTHVL 412 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 29/211 (13%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEA 86 + +M V + P+ L E LL L K +L L+ TG R++E Sbjct: 91 EQDPFIMLEMPKVEKKPPQTLTVEETERLLEAPKPDTPLGLRDKAMLELLYATGIRVSEL 150 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 ++L + D +L + K+R +P G T + L S L + Sbjct: 151 ISLNKDDVNLELHFLRCTGERGKERI---------LPFGGVTAEWLDLYLREGRSHL--I 199 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + + + P NRR GR + W++ + +TPHT RH Sbjct: 200 LDERENPALFPNRRGGRISRQGFWKL-------------MKKYGQEAGITSDITPHTLRH 246 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 S+A+H+L G ++ +Q L+GH S+ ++Y Sbjct: 247 SFAVHLLERGADVRSVQELLGHSDASTIQMY 277 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 32/212 (15%) Query: 42 SMVHDELPKYLLAPEVSALL----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLA 97 LPK + A ++ LL H DL ++ ++++G R++E L GD LA Sbjct: 108 PKASKRLPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGLDLGDMDLA 167 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 R+ R+VP+ L+ + L + + + Sbjct: 168 GREV-------------------RLLGKGNKERIVPIGS----KALEALNRWLAVRNQFK 204 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 + R ++ R++ + V + + PH RHS+A HML A Sbjct: 205 PQDNAVFLNKRGGRLSHRSI-----QLVMQKWGEKQGLESHLHPHKLRHSFATHMLEASG 259 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q L+GH ++++T++YT + +A + Sbjct: 260 DLRAVQELLGHSNLATTQIYTHLDFQHLAKIY 291 >UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GL18_9FUSO Length = 315 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 35/213 (16%) Query: 43 MVHDELPKYLLAPEVSALLHYV----PDLHRKMLLATLWNTGARINEALALTRGDFSLAP 98 LP+ L EV ++ + + ++++ L TGAR++E L L D Sbjct: 126 KREKRLPEVLNLKEVKTIIDNIGHTPEGMRDRLIIKFLIATGARVSEILNLNIKDV---- 181 Query: 99 PYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN 158 E ++ +R+VP+ +S ++++ ++ + ++ Sbjct: 182 --------------ENQGYEFIKVLGKGSKYRIVPIYES-LENEIKDYISNYRPKLK--- 223 Query: 159 RRTGRTEKARIWEVTDR-TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 G +++ T R + + A + V PH FRHS A +L G Sbjct: 224 ---GSESSFKLFPDTRRENFWKRLKKTAKDAGIE-----KNVYPHIFRHSVATVLLSNGA 275 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 ++++Q ++GH +IS+TE+YT V D+ + Sbjct: 276 DIRIVQEILGHANISTTEIYTHVEKSDLKRIYN 308 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 33/219 (15%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVP----DLHRKMLLATLWNTGARINEALALT 90 Q + + LPK L +V LL + P D K L L+++G R++EA+ + Sbjct: 8 PFESVQSPKIPETLPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVGVN 67 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 F + V K+R +P G+ + + W V + Sbjct: 68 LSSFESELSFVKVLGKGKKERM---------LPVGKFAKEAI---EKWLVEREHIAKDTN 115 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + + +R ++ R ++ I A PV+PH RHS+A Sbjct: 116 ALFINKYGKR-----------ISIRAMQERIYNISIAQGLS------PVSPHMLRHSFAT 158 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L + L+ +Q ++GH S+S+T++YTK+ +A + Sbjct: 159 HILESSGDLRSIQEMLGHSSLSTTQIYTKLNFQQLAKIY 197 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 33/215 (15%) Query: 38 LRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRG 92 L + + LP L EV L++ + + + + L+ +G R++E LT Sbjct: 108 LLESPKLWQLLPDILDIEEVDLLMNQPDNKTAKGVRDRAIFELLYGSGLRVSEVCTLTIY 167 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 R+ R+VP+ ++ Q + Sbjct: 168 SID---------------------DQYIRVYGKGSKERIVPIGSQALMAVDQYL------ 200 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 R + E++ + +++ A + ++PHT RHS+A H+ Sbjct: 201 -SLYRWQWDSEKEQSLFVTLRGKSMDRISIWRSIKEYAQQAGITKTISPHTLRHSFATHL 259 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 L G L+V+Q L+GH +ISST+ YT+V + + Sbjct: 260 LNNGADLRVIQDLLGHANISSTDRYTRVSSAHLQE 294 >UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobacteraceae RepID=B8FH24_DESAA Length = 315 Score = 157 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 30/203 (14%) Query: 52 LLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 L E ALL + D + + L++TG R++E L G + + V Sbjct: 128 LTVDEAFALLDSILDDSLAGARDRAMFECLYSTGIRVSELAGLNMGRVNFSGKTLRVLGK 187 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEK 166 K R+VP+ + + ++ +L + + Sbjct: 188 GDK-------------------ERIVPVG-AKALEHIKAYRDRLAVEGPKNPDPEAVFLN 227 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLM 226 +T R++R + + V + + P++PH RH++A HML G L+ +Q L+ Sbjct: 228 KNGGRLTTRSIRRILEKIVR-----DMGLNRPLSPHGLRHTFATHMLDNGADLRSVQELL 282 Query: 227 GHKSISSTEVYTKVFALDVAARH 249 GH SIS+T YT V + A + Sbjct: 283 GHASISTTGRYTHVSIDRLMAAY 305 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 156 bits (395), Expect = 5e-37, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 30/223 (13%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALAL 89 +A + + LP L +V LL + K +L L+ TG R++E + L Sbjct: 99 PMAQIESPKLSRHLPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGL 158 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 T SL + K RLVP+ + +++++ + Sbjct: 159 TMEQMSLRQGLVRIIGKGGK-------------------ERLVPMGEM-AITEVEHYLTS 198 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 + + + R +T +T I + A + ++PHT RH++A Sbjct: 199 ARHELLGHIQSDVVFPSKRSQMMTRQTFWHRIKLYASRAGIE-----TELSPHTLRHAFA 253 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 H+L G L+V+Q L+GH +S+T++YT V + H+ Sbjct: 254 THLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQH 296 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 87/236 (36%), Gaps = 45/236 (19%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-------------------LHRKMLL 73 + + + + LPK+L A ++ LL +L Sbjct: 121 ASPIKNVSLPKMEKRLPKFLTAQQMVELLGAPLKPLATPKKKGPGRPISATVCYRDVAIL 180 Query: 74 ATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVP 133 T+++ G RI+E LT D V+ + R VP Sbjct: 181 ETIYSCGLRISELCGLTAQDIDWNEQLVRVRGKG-------------------KKERQVP 221 Query: 134 LSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGV 193 + + + + P G TEKA ++ R ++ + + +A A D Sbjct: 222 IGEPALTAIRNYWSTLEQSPGGGSPVFLGETEKAAA--LSPRVLQQRLKKYLALAGLDP- 278 Query: 194 TFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 +TPH RHSYA HML AG L+ +Q L+GH + +T+VYT V + + Sbjct: 279 ----SLTPHKLRHSYATHMLDAGADLRSVQELLGHAHLITTQVYTHVSTERLKRAY 330 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 43/255 (16%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHD---ELPKYLLAPEVS 58 S S+ H +++ V Y +++ YP L Q LP Y ++ Sbjct: 80 SASINHMITSLHVFHRY---------LSMTYPKLLNPVQNIRTKKAVQHLPVYFNMQDIE 130 Query: 59 ALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEK 114 LL D + K ++ L+ G R++E +L L + Sbjct: 131 RLLDSFRDSDAEIMDKAIVELLYGCGLRVSECCSLMLQQVYLEQGFL------------- 177 Query: 115 AARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTD 174 R+ R+VP+ + L+ + +++ +R R A+ E+T Sbjct: 178 ------RVIGKGNKERMVPMH-ARCKKALENYLTKVRK--QRYARSNFVFINAKGQEITR 228 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 + + I + + A D ++ H+FRHS+A H+L G L+V+Q L+GH IS+T Sbjct: 229 QYIHVMIKKRLLALGLD-----ERLSAHSFRHSFASHLLDGGADLRVVQELLGHSDISTT 283 Query: 235 EVYTKVFALDVAARH 249 ++YT V + + + Sbjct: 284 QIYTHVQNKRLQSVY 298 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 33/207 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFS 95 V PK + EV+ LL D + + +L L+ TG R++E ++L D + Sbjct: 108 PRVQKYWPKAISVQEVNMLLAAASDSETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDIN 167 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L + G+ R VPLS V L+ + + + + Sbjct: 168 LDESHLKC--------------------IGRGKTRKVPLSQP-AVDVLKLYLERSRPLLV 206 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 R R +T + + + A G +TPHT RHS+A HM+ Sbjct: 207 RGQDEQALFVNHRGQRLTRQGFWLILKAYASEAGIKG------ITPHTLRHSFAAHMIDG 260 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFA 242 GI L+ +Q +GH SI++T+VY ++ + Sbjct: 261 GIDLRQVQEWLGHASITTTQVYRQIKS 287 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 34/223 (15%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPDL-----HRKMLLATLWNTGARINEALAL 89 L + LPK+L E L+ + K L ++++G R +E L Sbjct: 96 PFKLLPLPKREKLLPKFLTQEETDRLIDTAANQGKLPARDKALFELIYSSGLRRSEVTGL 155 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 + D L V K RLVP++D + L+ ++ Sbjct: 156 SIKDIDLNLGVVRVMGKGSK-------------------ERLVPITD-LAIEALKEYLST 195 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 + R +T + + A + VT H+ RHS+A Sbjct: 196 RGVYNSGDPLFLNRL----GGRLTGDGLAYLVKNITIKA-----NLARKVTAHSLRHSFA 246 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 HML G L+ LQ ++GHKS+S+T+VYT V + + Sbjct: 247 THMLNNGCDLRSLQEMLGHKSLSATQVYTHVSLDRLKKIYGQT 289 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 82/228 (35%), Gaps = 41/228 (17%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP----------------DLHRKMLLATLWNTGARINE 85 S + + LP L + +L++ V L +L L+ TG R+ E Sbjct: 117 SKIKNMLPSVLDEYQAESLMNNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRVGE 176 Query: 86 ALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQT 145 +L D + + ++ R+VP Y + Sbjct: 177 LTSLNIQDINFSSHTI-------------------KVTGKGNKQRVVPFGVPAYKALSAW 217 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 + + + R + R + R VR + + +A ++PH R Sbjct: 218 ISKDGREILLRNSVEEAVFLGTRGKRIDQRLVRQIVHDEAKSAHV------PDISPHALR 271 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 HS A HML G L+ +Q L+GH S+++T+ YT V + ++ F Sbjct: 272 HSAATHMLNGGADLREVQELLGHSSLNTTQRYTHVSIESLKRKYSQAF 319 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 28/229 (12%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARIN 84 D P + V +PK L EV+ +L V L + LL L+ TGARI+ Sbjct: 92 PDNPTS--GVDGVKVPSGIPKALSEDEVARILASVTGVDSFALRDRALLEFLYATGARIS 149 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 EA L+ D + R+ R+VP S + L+ Sbjct: 150 EACGLSLSDLDMESQLV-------------------RLFGKGSKERIVPFG-SHAKAALE 189 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRT-VRTWIGEAVAAAAADGVTFSVPVTPHT 203 + M + R ++ + T + + A V+PH Sbjct: 190 EWLGAGGRTMLVSEQWAKRDHADAVFLGSRGTRLSRQAAWRIVQKFAQIAEVGDEVSPHV 249 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 RHS A HML G L+++Q L+GH S+S+T+VYT+V + ++ Sbjct: 250 LRHSCATHMLIHGADLRIVQELLGHASVSTTQVYTRVDNEVLFDMYKES 298 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 30/209 (14%) Query: 46 DELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 +LPK L EV LL L + LL ++ G R +EA+ + + + Sbjct: 123 KKLPKVLSRDEVQHLLSQPRGTGPAALRDRALLELMYACGLRASEAVDMQLDELDVDDGI 182 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 R RLVP+ S + L+ + + + M Sbjct: 183 L-------------------RANGKGNKERLVPIG-SKALDALRHYLTRGRPQMVGLREE 222 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 R +T + + + A ++PHT RH++A H+L G L+ Sbjct: 223 KRVFVNQRGHGLTRQGLYKIVQRHARTAG-----LGDKMSPHTLRHTFATHLLAGGCDLR 277 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAARH 249 LQ ++GH I++T++YT + A + + Sbjct: 278 SLQEMLGHADIATTQIYTHLSAERLRDVY 306 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 156 bits (393), Expect = 9e-37, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 29/224 (12%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEAL 87 + L + LPK L +V+ LL L + +LA ++ TG R+ E + Sbjct: 112 ESVADLLNSPKLWKYLPKVLSPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIV 171 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 L L Y R R+V L + V+ ++ + Sbjct: 172 TLPLNSVKLTEGY-------------------ARCVGKGNKERMVSL-NPVAVAAVEAYL 211 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 + + RRN TE+A + + + + A V S V+PHT RHS Sbjct: 212 RHERPVLTRRNT----TEQALFLNRGGKQLSRVMVWNIVKKNAARVGCSKEVSPHTLRHS 267 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 +A HM+ G ++ LQ L+GH +I +T++YT V + A H++ Sbjct: 268 FATHMMAGGAEIRALQELLGHANIRTTQIYTHVDHSRLKAVHQM 311 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 156 bits (393), Expect = 9e-37, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%) Query: 39 RQMSMVHDELPKYLLAPEVSALLHYVP------DLHRKMLLATLWNTGARINEALALTRG 92 Q + LPK + E++A+L L L+ L+ TGARI E + L+ Sbjct: 111 VQQKKLGKHLPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEVMNLSPD 170 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D LA +P V ++ + RLVPL S+ V L+ + + Sbjct: 171 DLYLAGEFPHV-----------------KLFGKGRKERLVPLG-SFAVQALEDYLLLGRP 212 Query: 153 PMERR--NRRTGR--TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 + + R G R ++ ++ I + AA V+PH+ RHS+ Sbjct: 213 LLLGKAKTRVAGHPLFLNKRGLSLSRQSAWEIISQTAVAAG-----CVSEVSPHSLRHSF 267 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 A H+L G ++ +Q L+GH S+++T++YTKV + H + P ++ Sbjct: 268 ATHLLEGGASIRDVQELLGHASVTTTQIYTKVSMNTLREVHAL--THPRAN 316 >UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6I8_9ACTN Length = 342 Score = 156 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 78/221 (35%), Gaps = 27/221 (12%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----HYVPDLHRKMLLATLWNTGAR 82 + + A + LP L + LL V L + LL L+ TG R Sbjct: 127 KGLTKKDSAAALASPKIPKTLPHVLSESSIEKLLATCQEDTVCGLRDRALLELLYATGCR 186 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 I+EA L D S R+ R+VP+ Sbjct: 187 ISEAAHLCVSDISFDSKQV-------------------RLFGKGSKERIVPIYPECA-RI 226 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT--VRTWIGEAVAAAAADGVTFSVPVT 200 L + + + + + + + + ++ R + V T Sbjct: 227 LHMYLTTARPVLLSKQKNQAQAQTNQHVFISTRGKAMSDQALRYVFEHYMRLSHLQEIAT 286 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 PHT RHS+A +L G L+ +Q L+GH S+++T++YT V Sbjct: 287 PHTMRHSFATELLSHGADLRSVQELLGHASLATTQIYTHVS 327 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 29/214 (13%) Query: 40 QMSMVHDELPKYLLAPEVSALL----HYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 ++ LP +L+ E+ LL V + ++++ ++ G R++E + L D Sbjct: 98 KIKRQGRHLPHFLMYDEIETLLLSCDESVLGVRNQVMIELMYACGLRVSEVVDLQIHDLD 157 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L V K+R LVP +L + + + Sbjct: 158 LTERSLRVIGKGNKERQLFFY------------ESLVP--------KLWSYLNLYRPQFP 197 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + R +T R ++ + A + + PH RHS+A H+L Sbjct: 198 NVSDTEAVFLNQRGKPLTPRGIQHILEHQGKTAG-----LRMKLHPHMLRHSFATHLLDN 252 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+V+Q+L+GH+S+S+T++YT V + + Sbjct: 253 GASLRVVQTLLGHESLSTTQIYTHVSMQKIKEVY 286 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 42/235 (17%) Query: 35 ALALRQMSMVHD------------ELPKYLLAPEVSALLHYVP-----DLHRKMLLATLW 77 LALRQ + D +PK L +V ALL L + +L ++ Sbjct: 96 QLALRQNRISDDPCLKMRSAKQPLRIPKTLSEAQVEALLAAPDVTTPLGLRDRTMLELMY 155 Query: 78 NTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS 137 +G R+ E + L + + + K RLVP + Sbjct: 156 ASGLRVTELVLLKSIEVGMNEGVLRITGKGGK-------------------TRLVPFGEE 196 Query: 138 WYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSV 197 V ++ + + + + AR +T + T I + AAA + Sbjct: 197 ARV-WIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWTLIKKHAAAA-----EINA 250 Query: 198 PVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 P++PHT RH++A H+L G L+V+Q L+GH IS+T++YT V + H++ Sbjct: 251 PLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLKHLHQIH 305 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 32/213 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 LP++ E+ AL V +L +++L L+ TG R++E + + + D Sbjct: 100 PKKEKYLPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDF 159 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V K R VP ++ ++ + K Sbjct: 160 YANGVTVLGKGSK-------------------ERFVPFG-AYCRQSIENYLEHFKPIQSC 199 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + + +T+R VR + + V A + PH RH++A H+L G Sbjct: 200 NHDFL--ILNMKGEAITERGVRYVLNDIVKRTAG-----VSEIHPHKLRHTFATHLLNQG 252 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +QSL+GH ++S+T YT V + + Sbjct: 253 ADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVY 285 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 82/226 (36%), Gaps = 43/226 (19%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVP------------DLHRKMLLATLWNTGARI 83 L + LPK L EV +L++ V +++L+ L+++G R+ Sbjct: 111 LEEVKAPKRTKSLPKSLNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRV 170 Query: 84 NEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL 143 +E ++L D ++ K R + R+ Sbjct: 171 SELVSLRINDIDPDERTIRIRGKGDKDRIVLFDENTRDLLMDYLKRRI------------ 218 Query: 144 QTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 + NR +T R V+ I A VTPH Sbjct: 219 ------HESEYLFLNRFGD--------PLTPRYVQMMIKNYARKAG-----IKKKVTPHI 259 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 RHS+A H+L G+ ++ +Q L+GH ++S+T++YT V + + Sbjct: 260 LRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTSVDMQTLKNVY 305 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 27/218 (12%) Query: 43 MVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFSL 96 LPK L ++ +++ + +L L+++GAR++E + + D S Sbjct: 105 KSARRLPKALTISQIVSMIDVAYREGQPITARDQAMLELLYSSGARVSELIGINLNDLSS 164 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 T T ++ R+VPL S+ ++ + +++ + Sbjct: 165 ID-------------TSDGKVTTLKLRGKGAKERIVPLG-SFATKAVENYLVRVRPDLAS 210 Query: 157 RNRR--TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 ++ + + +R ++ ++ + +A AA + V+PH FRHSYA H+L Sbjct: 211 KSSKVTSALFLNSRGSRISRQSAWQMVLDAADAAG-----ITEHVSPHVFRHSYATHLLN 265 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 G ++V+Q L+GH S+++T++YT + V + + Sbjct: 266 GGADIRVVQELLGHASVTTTQIYTLITIDKVRESYALT 303 >UniRef50_A9DNU9 Tyrosine type site-specific recombinase n=2 Tax=Bacteria RepID=A9DNU9_9FLAO Length = 428 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 84/219 (38%), Gaps = 37/219 (16%) Query: 28 VAIDYPAALALRQMSMVHDE------LPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGA 81 + Y L +Q + D LP L E LL +P+L K +L +++ G Sbjct: 223 IKFYYEKVLGGKQQTYFIDRPKRSKPLPIVLSQKETIQLLKSIPNLKHKTILTVIYSCGL 282 Query: 82 RINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVS 141 R++E + L L + + + R V L+ Sbjct: 283 RVSELIDLKLSSIYLEENKIHI------------------VAGKGKKDRYVTLAVRTKKL 324 Query: 142 QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 + ++ G+ + +++ +I + A + VTP Sbjct: 325 IKIYIKKYAPEHYLIEGQKGGKYATS--------SIQKFIKKYSNEAG-----LTKNVTP 371 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 HT RHS+A H+L GI L+ +Q ++GH++ +TE+YT + Sbjct: 372 HTLRHSFATHLLEKGISLRYIQYILGHQNSKTTEIYTHI 410 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 79/214 (36%), Gaps = 31/214 (14%) Query: 42 SMVHDELPKYLLAPEVSALLH-----YVPDLHRKMLLATLWNTGARINEALALTRGDFSL 96 V + P+ L E LL+ + K +L L+ TG R++E +++ D ++ Sbjct: 111 PHVEKKTPEILTLEETVQLLNQPELDSAKGIRDKAMLELLYATGMRVSELISMKLTDVNM 170 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 A Y + R++P L+ + + + + + Sbjct: 171 AMGYVLCR--------------------DSDKERVIPFGTE-AEKALKRYLEESRSVLLK 209 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 ++ + I A A + +TPHT RHS+ H++ G Sbjct: 210 GKESEFLFVNCSGKSMSRQGFWKIIKFYSAQAG-----ITKDITPHTLRHSFGAHLVQNG 264 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ +Q +MGH IS+T++Y + V + Sbjct: 265 ADLRAVQEMMGHSDISTTQIYMDMNVRRVREIYA 298 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 27/222 (12%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEAL 87 + L + + LPK L EV A+L L + +L L+ G RI+E Sbjct: 94 ASPAKLVKSPKLPKTLPKVLPVEEVFAILDMPDVKTVLGLRDRAILELLYGGGLRISELC 153 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 L D + V K+R +P Q+ R + + L T+ Sbjct: 154 GLDLLDIDRSGRIVRVMGKGSKERL---------VPVNAQSIRALEAYLARRGELLATIR 204 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 N R GR +T R++ + V A + V+PH RHS Sbjct: 205 KDQAPEAMFLNFRGGR--------LTPRSIARHLDTYVLKCA-----LTRKVSPHAMRHS 251 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 +A H+L G ++ +Q L+GH S+S+T+ YT+V + + Sbjct: 252 FATHLLGGGADIRSIQELLGHSSLSTTQRYTQVTWEQLQQVY 293 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 31/210 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 +LP + ++ ALL L K LL ++ TG R+ EA+ LT D L Sbjct: 100 PKSERKLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAVKLTLSDIDL 159 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 R + R RLVPL ++ + + + + Sbjct: 160 H-------------------RGSIRTIGKGDKLRLVPLGQEAAY-WVERYCNESRPLLLK 199 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + ++ + + E AA ++PH RH++A H++ G Sbjct: 200 NKICDEVFVSQKRSGISRQLAWMIVKEYAEAAGIA------SLSPHGLRHAFATHLVNHG 253 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 + L+ +Q ++GH I++T++YT V + + Sbjct: 254 VDLRSVQMMLGHSDINTTQIYTHVANIRLK 283 >UniRef50_A3XLJ3 Tyrosine type site-specific recombinase n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XLJ3_9FLAO Length = 405 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 32/221 (14%) Query: 26 LPVAIDYPAA-LALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARIN 84 L + +++P A Q +LP L EV LL P+L + +LA L++ G RI Sbjct: 185 LSILLEFPKAHFDGLQRPKKDKKLPVVLSRKEVIDLLRATPNLKHRTILALLYSAGLRIG 244 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 E LAL L V + K R ++ + +VPL ++ ++ Sbjct: 245 ELLALRCDAIDLDRMQ--VHIKKGKGRKDRTVKL---------AQAVVPL----LLNYME 289 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 + + R + + +RT++ ++ A VTPHT Sbjct: 290 SYAPTHYLIPGRDGQ-----------GYSAGAIRTFLKKSCTRAGIKKA-----VTPHTL 333 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 RHSYA HM+ G+ L+ +Q L+GH +T +YT V D+ Sbjct: 334 RHSYATHMMDHGVALRHIQELLGHAKPETTMIYTHVSQQDL 374 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 84/235 (35%), Gaps = 34/235 (14%) Query: 25 SLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNT 79 V D A+ LR+ +LP++ EV ++ + D + + ++A + T Sbjct: 86 RGLVKADPTVAIQLRRGK---KKLPEFFYQDEVGQVIRSLNDGKPLTVRNRAIVALFYAT 142 Query: 80 GARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWY 139 G R++E L L V R V D Sbjct: 143 GMRLSELTDLKIKQLDLENGMILVHGKG-------------------NKDRYV-FFDQES 182 Query: 140 VSQLQTMVAQLKIPMERRNRRTGRTE-KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP 198 L+ + + + + TG ++ R + + + A + Sbjct: 183 KKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISSRGIAKAVQQIFQKAG-----LTAG 237 Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 PH RHS+A ML G L+ +Q L+GH+ +S+T++YT V + +R F Sbjct: 238 AHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYTHVSMQHLTVEYRQHF 292 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 36/225 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYV----PDLHRKMLLATLWNTGARINEALALTRGDFSLA 97 D LP+ L V+ L+ P + LL ++ G R+ E ++L D Sbjct: 126 PKWPDHLPQALTQDAVNRLISAAGTIEPAARNRCLLELAYSAGLRVAELVSLKWSDLDET 185 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 + V K R+VP W S L AQ P E+ Sbjct: 186 ERWITVMGKGSK-------------------ERMVPYG-QWAASALAEWKAQC-PPSEKG 224 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 G+ K+ +T+RTV + A A G +PHT RH +A HML G Sbjct: 225 WVFPGKGGKS----LTERTVHRLVEAASQLAGTPGA------SPHTLRHCFATHMLEGGA 274 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARH-RVQFAMPESDAV 261 +K +Q L+GH+S+ +T+ Y ++ + + V + E D + Sbjct: 275 SVKAVQELLGHESLLTTQRYLRISPERLRRSYDDVNDDLSERDGL 319 >UniRef50_A6H1H3 Integrase/recombinase n=2 Tax=Bacteria RepID=A6H1H3_FLAPJ Length = 347 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 30/206 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 LP L E+ +L ++ K +L+ +++ G R +E L L D Sbjct: 164 PKRSKLLPNVLSKEEIKLILEAHSNIKHKTMLSLIYSCGLRRSELLHLKPTDIDSKRGIV 223 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 ++ + + R+ PLS V + + Sbjct: 224 IIR------------------QSKGKKDRIAPLSPKILVMLREYYSNYKPKSWLFEGQIP 265 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 G T ++++++ + +A+ A + PV+ H RHSYA H+L +G L+ Sbjct: 266 GET-------YSEKSLQNVLKQALEKA-----KIAKPVSLHWLRHSYATHLLESGTDLRY 313 Query: 222 LQSLMGHKSISSTEVYTKVFALDVAA 247 +Q L+GH S +TE+YT V ++ Sbjct: 314 IQELLGHSSTKTTEIYTHVSTKNLQQ 339 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 31/219 (14%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTR 91 AL + V LPK L E++ L+ L + +L ++ G R++E + L Sbjct: 125 ALVERPRVGRRLPKVLSFDEIALLIEAPEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKL 184 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 D K RLVPL + + +L+ Sbjct: 185 ADIDRRKGIVMALGKGGK-------------------RRLVPLGEPALAAI--DAYLELR 223 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 R R +T + V +G A V + P +PH RHS+A H Sbjct: 224 ATHPRSAATQVLFLSPRGGPLTRQAVWKLLGGYARA-----VGIAKPSSPHKLRHSFATH 278 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 +L G L+ +Q+L+GH ++ +TE+YT + V A +R Sbjct: 279 LLEGGADLRSVQALLGHANVVTTEIYTHLADDHVRAAYR 317 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 28/219 (12%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPDL----HRKMLLATLWNTGARINEALALTRG 92 L + +P+Y+ EV +L P+ + ++A ++ G R++E +LT Sbjct: 102 DLVKAPKTRRRIPEYISYEEVQKILEAFPETHLGKRNRAIVALMYYCGLRVSEVCSLTLR 161 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D SL P V++ + K R+VPL+ + + + Sbjct: 162 DISLESD-PLVRVKSGK----------------GDKDRIVPLTPDAVRIISDYLKHRDRF 204 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 P NR R +T ++V + V + + PH FRHS A H+ Sbjct: 205 PDA--NRHIKLFVGIRGEPITRKSVNKMLQNHVKK-----IFPDKHLHPHIFRHSCATHL 257 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 L G +K++Q ++GH +IS+T +Y + + R+ Sbjct: 258 LQRGASIKIVQEILGHANISTTSIYLHITDREKREAVRL 296 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 26/220 (11%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGARINEALAL 89 L +P L E+ LL+ V L + +L +++G R++E + Sbjct: 101 PLEAVSTPRTEKYIPAVLSVDEIFVLLNLPFPEDVFGLRDRAILELFYSSGIRVSELTGI 160 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D + ++ K+R + PA + R + VA Sbjct: 161 NEEDMDFSQGLIRIRGKGKKERIVPIGQ-----PASEAVQRY--MMKKPGSETSGKAVAT 213 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 +P+ NRR GR ++ R+V + + V+ + ++PHT RHS+A Sbjct: 214 CPVPL-FVNRRQGR--------LSARSVARILSKYVSMSG-----LQKQISPHTLRHSFA 259 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H++ AG L+ +Q L+GH+S+S+T+ YT V + A + Sbjct: 260 THLMDAGADLRSIQELLGHESLSTTQKYTAVSVNRLMAVY 299 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 154 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 91/252 (36%), Gaps = 37/252 (14%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 + SV H + A+ Q L D + LP Y E+ ++ Sbjct: 68 AASVNH-----AITAIRGFHQ--FLAFRFDELDPAEYLEQLQRTQSLPVYCTRDEIEKIM 120 Query: 62 ----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 H D+ + L+ G R++E ALT L Sbjct: 121 AQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELGML---------------- 164 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R+ RLVP+ + ++ V ++ P+ ++ + + T ++ Sbjct: 165 ---RIWGKGNKERLVPMPKQT-IKIVREYVDTVR-PLYQKKPTSWLFITRLGKKTTTASI 219 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + I A P+TPH RH+YA HML G L+ +Q L+GH I++T++Y Sbjct: 220 ESMIKSVCIQAG-----IQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIY 274 Query: 238 TKVFALDVAARH 249 T + + + Sbjct: 275 THIDRSRLRTAY 286 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 30/213 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 +LP L E ALL+ + +L ++ TG R++E + LT Sbjct: 102 PKPQRKLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLDE 161 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + V K+R +P G+ +V + S Q ++ + Sbjct: 162 ENGFVRVIGKGNKERI---------VPMGEAATEMV---IRYRHSARQVLLKGGRCNDLF 209 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + R + W + R A P++PH RH++A H+L G Sbjct: 210 LSNRGAAMTRHNFWHIVKR-------------YAYEANIMKPLSPHGIRHAFATHLLNHG 256 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q ++GH IS+TE+YT V + H Sbjct: 257 ADLRAVQMMLGHADISTTEIYTHVANARLKKLH 289 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 81/223 (36%), Gaps = 42/223 (18%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + + LP L E++ +L + +L ++ G R++E AL DF Sbjct: 121 ENPKLARNLPDVLTRDEMATILARPDLSDRLGFRDRTMLELMYAAGLRVSELCALRPLDF 180 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPL---SDSWYVSQLQTMVAQLK 151 V K R+VP+ S + + L+ Sbjct: 181 DAQAGVVRVFGKGAK-------------------ERIVPVHHVSCALVTAYLRDWRPAFS 221 Query: 152 I--PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 P NR + +W+V R V ++PHTFRHS+A Sbjct: 222 PVEPAMFLNRSGKGLSRQAVWKVVKRHV-------------AEAGIHKDISPHTFRHSFA 268 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 H+L G L+ +Q L+GH IS+TE+YT V A + H Sbjct: 269 THLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAH 311 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 30/214 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + +LP +L E+ A+ + ++ L+ +G R +E L D L Sbjct: 107 PKLDKKLPSFLYENEMQAIFDAIDTDSLLGARNLAIIELLYASGIRASECTGLKLKDIDL 166 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V + R +P+ S+ V L + + Sbjct: 167 DLSTLLVMGKG-------------------KKERFLPVG-SFAVEALSLYLDKRTAKFGP 206 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + R +TDR +R + + + A + + +TPH RH++A HML G Sbjct: 207 HAQSDPLFINYRGGALTDRGLRKILAKVIEDA-----SLTSKLTPHVIRHTFATHMLNEG 261 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ +Q L+GH + +T++YT V + +R Sbjct: 262 ADLRTVQELLGHTDLKATQIYTHVTRDRLRDVYR 295 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 27/250 (10%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + A+ + I ALAL LP + +V+ LL Sbjct: 73 KTLNRHLSALRGFYKWMQREKLIATDPALALSN-PRAPRNLPHTMTDSDVNRLLESCDVS 131 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + L L+ TGARI+E L L R+ Sbjct: 132 TAAGLRDRAFLEFLYATGARISEVATLRLEQVDLQNGTV-------------------RL 172 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VPL +S + L+ + + + ++ +TGR A V + Sbjct: 173 FGKGSKERIVPLYES-AIEWLKKYLRSSRPTLLLKD-KTGRVHSALFISVRGNNMSADSL 230 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 V ++ ++PH RH+YA +L G L+++Q L+GH+S+S+T+VYT + Sbjct: 231 RKVFSSYLTAAGLDSSLSPHAMRHTYATELLGGGADLRIVQELLGHESLSTTQVYTHLSV 290 Query: 243 LDVAARHRVQ 252 + + Sbjct: 291 DRLKEAAKAA 300 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 31/222 (13%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 ID P +L + DE+ + L P+++ L K++L L+ +G R++E + + Sbjct: 102 IDGPKLPSLLPNILSQDEMLRLLTTPDITNKL----GFRDKVILELLYASGIRVSELIGV 157 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 DF V K+R +A ++ YV +++ M Sbjct: 158 HVLDFDQDKGIIKVFGKGGKERYIPLHSSAMKLLI-------------HYVQKIRPMFTP 204 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 ++ + NR + IW++ R A + + ++PHTFRH++A Sbjct: 205 IEKFL-FLNRSGKGLTRQAIWKIIKR-------------YALLASINKSISPHTFRHTFA 250 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 H+L G L+ +Q L+GH +S+TE+YT V + + H + Sbjct: 251 THLLEGGADLRSVQLLLGHVDMSATELYTHVQSDRLKYIHSM 292 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 31/213 (14%) Query: 38 LRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRG 92 L + + +P + ++S LL L K LL ++ TG R++EA+ L+ G Sbjct: 111 LLKPPKIDKNIPTLITEQQISRLLSAPDTDTPHGLRDKALLELMYATGLRVSEAVRLSFG 170 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 + L R R+VP+ V ++ + + Sbjct: 171 NLDLD-------------------RGCITTLGKGNKQRIVPMGRES-VYWVERYYKEARP 210 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + + + ++ + + E + A + ++PH+ RH++A H+ Sbjct: 211 LLLKGRSCDALFVSQKKTGISRQLAWMIVKEYASQAGIE------HISPHSLRHAFATHL 264 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 + G+ L+V+Q ++GH +++T++YT V + + Sbjct: 265 VQHGLDLRVVQDMLGHADLNTTQIYTHVANVRL 297 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 30/216 (13%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + P L +V ALL L + +L ++ +G R++E + L + L Sbjct: 147 AKQPARFPATLSEAQVEALLAAPEVGTALGLRDRTMLELMYASGLRVSELVMLKTVEVGL 206 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V K RLVP + + ++ + + + + Sbjct: 207 NDGVVRVMGKGSK-------------------ERLVPFGEVAH-GWIERYLREARPALLG 246 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 AR +T + I A ++PHT RH++A H+L G Sbjct: 247 ARTSDALFVTARGEGMTRQQFWNIIKRHAMRA-----EIRAHLSPHTLRHAFATHLLNHG 301 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 L+V+Q L+GH IS+T++YT V + H Sbjct: 302 ADLRVVQMLLGHSDISTTQIYTHVARERLRTLHAAH 337 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 31/216 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + +LP EV LL VP L + +L L+ TG R++E L L D Sbjct: 100 ESPKAEKQLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDL 159 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 Y + + R +P V Y+ Q + + + Sbjct: 160 QFELGYLQCEGKGERARI---------IPVSSVAQSFV----ERYIQQARNGLGGRETEA 206 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 N R GR + W++ R A +TPH RHS+A H+L Sbjct: 207 LFLNGRGGRLSRQGFWKMIKRR-------------AKLAGIEKEITPHVLRHSFATHLLE 253 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+ +Q ++GH +++T+VYT V + +R Sbjct: 254 NGADLRAIQQMLGHADLATTQVYTHVNKSRLHDVYR 289 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 32/227 (14%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGAR 82 V +D +AL ++LP+ L EV L+ L LL ++ TG R Sbjct: 96 VEVDPTQGIAL---PKAVNKLPELLSREEVVRLIAAPGVDTPLGLRDTALLEFMYATGCR 152 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 ++EA L L + KQ R+VPL D V+ Sbjct: 153 VSEACDLELSSLHLDQGLVVLTGKGSKQ-------------------RMVPLGDCALVAL 193 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 L + + R R R ++ + + + +A + ++PH Sbjct: 194 LAWLEEGRPELVARAPREAHVFVNKRGSRLSRQGCFFRLRQHAVSAG-----ITRDISPH 248 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 RHS+A H++ G L+ +Q+L+GH IS+T+VYT + V + Sbjct: 249 KLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYTHLSQSHVRHAY 295 >UniRef50_Q1RHT1 Tyrosine recombinase xerD n=18 Tax=Rickettsieae RepID=XERD_RICBR Length = 305 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 88/221 (39%), Gaps = 25/221 (11%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYV------PDLHRKMLLATLWNTGARINEALA 88 L + ++LP+ L ++ +LL Y ++ L+ +G R++E ++ Sbjct: 92 PLLNIDLPKYQNKLPEILSIDDIKSLLEYCSQDISPEGARLNAMIHLLYASGLRVSELVS 151 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L D L + + + + R++ +++ S ++ +V Sbjct: 152 LKLSDI-------------LSNKVSREVKKIFSVLGKGNKERIIVINEPAINSLVKYLVV 198 Query: 149 Q--LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + + +N A +T + + A A + ++PH RH Sbjct: 199 RDNFVNKTKPKNLIYLFPSSAAAGYMTRQNFAILLKSAALYAGLN----PEHISPHVLRH 254 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 S+A H+L G L+V+Q L+GH IS+T++YT + + Sbjct: 255 SFASHLLEGGADLRVIQELLGHADISTTQIYTHLQTNHLKK 295 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 31/209 (14%) Query: 38 LRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRG 92 L + + +P + ++S LL L K LL ++ TG R++EA+ L G Sbjct: 94 LLKPPKIDKNIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFG 153 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 + L KQ R+VP+ + + + Sbjct: 154 NVDLDRGCITALGKGDKQ-------------------RMVPMGQESAY-WVGRYYTEARP 193 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + + + ++ + + E + A ++PH+ RH++A H+ Sbjct: 194 ALLKGRSCDALFVSQKKTGISRQLAWMIVKEYASQAGI------GHISPHSLRHAFATHL 247 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + G+ L+V+Q ++GH +++T++YT V Sbjct: 248 VQHGLDLRVVQDMLGHADLNTTQIYTHVA 276 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 152 bits (385), Expect = 8e-36, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 83/217 (38%), Gaps = 34/217 (15%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRG 92 A + +LP+ L A E L+ D L + LL +++G R++E AL Sbjct: 122 AALRAPKAPRKLPQVLDADEAVRLVEVPTDAPLGLRDRALLELFYSSGLRLSELCALRWR 181 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D L V KQ RLVP+ S V+ L+ Sbjct: 182 DLDLDSGLVTVLGKGGKQ-------------------RLVPVG-SHAVAALRAWQRD--- 218 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + +T ++ R V+ I + V PH RHS+A H+ Sbjct: 219 --SGGSAQTHVFPGRAGGAISQRAVQIRIKQLAVRQG-----MFKHVHPHMLRHSFASHI 271 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L + L+ +Q L+GH I++T++YT + +A + Sbjct: 272 LESSGDLRGVQELLGHSDIATTQIYTHLDFQHLAKVY 308 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 33/210 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 LP L E+ ++ V +L L++ G R++E +L GD Sbjct: 108 PKFGRHLPDILTVEEIDRIVAAVDTSTVKGRRDSAMLEVLYSCGLRVSELTSLRLGDLFF 167 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 Y V KQ RLVP+S + + + L + Sbjct: 168 GEGYIRVTGKGDKQ-------------------RLVPVSG----AAREKIQRYLDDRATK 204 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 + R ++T V T + EAV A D ++PHTFRHS+A H+L G Sbjct: 205 TSASDVVFLNNRGTQLTRVMVFTILREAVHRAGID-----KHISPHTFRHSFATHLLEGG 259 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 ++ +Q ++GH+SI +TE+YT + + Sbjct: 260 ASIRQVQEMLGHESILTTEIYTHLEGDHLR 289 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 30/212 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP----DLHRKMLLATLWNTGARINEALALTRGDFSLA 97 +LP+ L +V L++ D + +L +++G R++E + + D Sbjct: 98 PKSQKKLPQTLSIDQVFNLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTN 157 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 ++ R+VPL + L + Q + + + Sbjct: 158 EQTL-------------------KVLGKGNKFRIVPLGRK-AIEALDLWILQ-RNKLNKL 196 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 + ++T R ++ + A + PH RHS+A H+L + Sbjct: 197 VDDEFLFLNQQGKKLTARAIQYRL-----KFWAQKNNIPENIHPHLLRHSFASHVLQSSQ 251 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q L+GH +IS+T++YT + ++ + Sbjct: 252 DLRAVQELLGHSNISTTQIYTHLDFQHLSKIY 283 >UniRef50_A8UM85 Tyrosine type site-specific recombinase n=2 Tax=unclassified Flavobacteriales (miscellaneous) RepID=A8UM85_9FLAO Length = 376 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 86/222 (38%), Gaps = 37/222 (16%) Query: 27 PVAIDYPAALALR------QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTG 80 + Y + L + + +LPK L +V ++ +L K +++ L+++G Sbjct: 174 SIKFYYESVLGMPNRFYQIERPRKAKKLPKVLSKEDVLKVITNTNNLKHKCIVSLLYSSG 233 Query: 81 ARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYV 140 R NE + L D +++ K + ++ L + Sbjct: 234 IRRNELIHLKISDID--SKRMLIRIDAAKGKKDRYT-----------------LLSHALL 274 Query: 141 SQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVT 200 L+ Q K G+ + + ++V + A A + VT Sbjct: 275 KDLRDYYKQWKPEKYIFEGLYGK-------QYSAQSVGQIVKNAAIKAR-----IQITVT 322 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 PH RHS+A H+L G+ ++ +Q L+GH S +TE+YT V Sbjct: 323 PHMLRHSFATHLLEDGVDIRQIQVLLGHSSTKTTEIYTHVAT 364 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 87/229 (37%), Gaps = 37/229 (16%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWNTGAR 82 VA D AL L + LP L +V+ LL + L L+ G R Sbjct: 106 VASDPACALPLPGVPA---RLPDVLSIDQVNTLLDQEFREGPLGVRNACALELLYGCGLR 162 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 +E L GD L R+ R+VP+ S Sbjct: 163 ASELSGLDAGDAFLDEGIL-------------------RIVGKGSRERIVPIGGSAA-RC 202 Query: 143 LQTMVAQLKIPMERRNRR--TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVT 200 L + + + P+ R RR AR ++ +++ + + EA + Sbjct: 203 LASYLEDAR-PLLRSPRRLTPAVMLNARGGRLSRQSIHSIVREAGHVIGI------KDLH 255 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 PHT RHS+A H+L G L+ +Q ++GH IS+T++YT V V + Sbjct: 256 PHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYTHVDRTHVREEY 304 >UniRef50_A7JZS6 Integron integrase subfamily n=67 Tax=Gammaproteobacteria RepID=A7JZS6_VIBSE Length = 335 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 14/221 (6%) Query: 33 PAALALR-QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTR 91 P +L +R Q S+ +LP L E+ + ++ D K+ + L+ +G R+ E L L Sbjct: 101 PLSLDMRFQKSLTEKKLPVVLTREEIRRFVQHI-DPRYKLHIQLLYGSGLRVMECLRLRV 159 Query: 92 GDFSLAPPYPFV-QLATLKQRTEKAARTAGRMPAGQQ--------THRLVPLSDSWYVS- 141 D V Q K RT A+ Q R +P Y+S Sbjct: 160 QDIDYDYGAVRVWQGKGGKNRTVTLAKELHEPLKAQVNLARDYYFKDRHMPGYAGVYISE 219 Query: 142 --QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV 199 + + A+L T + E+ + + AA V Sbjct: 220 GLRRKYPKAELDFNWHFLFPSTKLSTDRDTGELRRHHINESAIQRAVKRAATDACIEKTV 279 Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 T HT RHS+A H+L +G ++ +Q +GH + +T++YT V Sbjct: 280 TCHTLRHSFATHLLESGADIRTVQEQLGHTDVKTTQIYTHV 320 >UniRef50_C6LKW3 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LKW3_9FIRM Length = 305 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 40/217 (18%) Query: 48 LPKYLLAPEVSALLHYVPD-------------LHRKMLLATLWNTGARINEALALTRGDF 94 LP+ +L E+ LL+Y+ D L ++ L+ TGAR+ E + Sbjct: 103 LPRIILREEIEKLLNYMYDCLKKNVLTGYKYQLRDIAVVEVLFATGARVYEISNIREDSV 162 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L + K R V +S+S ++ L+ Q + + Sbjct: 163 NLNSGQIRIMGKGGK-------------------ERYVQISNSSVLAVLRKYYKQNENEI 203 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 ++ R T++++R+ + + A + +TPH FRHS+A +++ Sbjct: 204 KKSGCF---FINNRGNRYTEQSIRSMLKKYAKQAG-----IARNITPHMFRHSFATYLIE 255 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 G+ + +Q + GH SI +T++Y + A A R Sbjct: 256 EGVDVSCVQQIRGHSSIKTTQIYIHIAAKKQAEILRE 292 >UniRef50_B7IFN3 Tyrosine recombinase xerC n=3 Tax=Thermotogaceae RepID=XERC_THEAB Length = 283 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 35/216 (16%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALL---HYVPDLHRKMLLATLWNTGARINEALA 88 Y + + + ++P +L EVS+L+ + +L +K ++ L+ G RI+E Sbjct: 92 YENPMERIKHPRIRRKIPDFLTEDEVSSLIGAFNEENELRQKTAISLLYYAGLRISELCN 151 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L D S PP+ V++ + RLVPL D + Sbjct: 152 LRTTDISFIPPFLRVEM------------------GKGRKDRLVPLPDKV--------IP 185 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 LK ++ N + E + V TV W+ E V A V PHT RHSY Sbjct: 186 ILKKYIDLENPKIFVFENGK-KHVHPSTVFRWLKEGVKRA-----NIKKDVHPHTLRHSY 239 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 A H++ G+ +KV+Q L+GH ++S+T +Y V + Sbjct: 240 ATHLIRKGVNIKVVQELLGHTNLSTTSIYLHVADQE 275 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 87/231 (37%), Gaps = 34/231 (14%) Query: 24 ASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY-----VPDLHRKMLLATLWN 78 V D AALA ++ VH PK L + L+ L LL L+ Sbjct: 95 QRKMVVEDPCAALANPKLPKVH---PKVLNVDQAIHLVETEITLDPEGLRDLALLEVLYG 151 Query: 79 TGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSW 138 +G R++EAL L L V K+R G RL + Sbjct: 152 SGLRVSEALGLDFAHVDLDQKLVRVLGKGRKERLVPLT--------GPAAERL-----AR 198 Query: 139 YVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVP 198 Y+ Q + +R GR ++ + + E + A Sbjct: 199 YIEQRGAFAPAAREQAVFLGKRGGR--------LSRKQADRIVKEMAVRSGA-----PCS 245 Query: 199 VTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 ++PHT RHS+A HML AG L+ +Q L+GH IS+T+ YT + V + Sbjct: 246 ISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTHLDLAQVMRVY 296 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 80/213 (37%), Gaps = 33/213 (15%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + LP+YL +V LL L + ++ L+ G RI+E + D Sbjct: 102 KNVKTSRPLPEYLTVDQVQDLLDSFDLEDKKGLRNRCIVELLYACGLRISECANIKIQDI 161 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 Y V + R+VP Y + LK Sbjct: 162 HFRDYYVRVMGK-------------------ESKERIVPF----YKELGDLLTKYLKKYG 198 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 + ++ ++ R+++ + + + + PH RHS+A H+L Sbjct: 199 SFSQLSDPFFKGSKGKAISVRSIQLLLEK-----KGRELKLPFQLHPHVLRHSFATHLLD 253 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 G L+++QSL+GH+++S+T++YT V + Sbjct: 254 NGADLRIVQSLLGHENLSTTQIYTHVSQDTLRR 286 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 32/203 (15%) Query: 40 QMSMVHDELPKYLLAPEVSALL-----HYVPDLHRKMLLATLWNTGARINEALALTRGDF 94 +M + P L EV LL + + K +L ++ TG ++ E L LT D Sbjct: 97 EMPKIRRNFPDILTIEEVEKLLMGPDGNTDKGIRDKAMLEIMYATGMKVTELLNLTIYDI 156 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L Y + + R++P+ S+ V L+ + +++ + Sbjct: 157 NLKLSYIKCRGI-------------------KNKERIIPMG-SYAVKCLEIYL-KVRTKL 195 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 +N + ++T + I + + + +T RHS+A+H+L Sbjct: 196 NVQN-IDYLFFNLQGDKMTRQGFWKIIKQYAQESG-----IKKKINAYTLRHSFAVHLLQ 249 Query: 215 AGIPLKVLQSLMGHKSISSTEVY 237 G +K +Q L+GH +++T++Y Sbjct: 250 NGADIKTIQELLGHSDMATTQIY 272 >UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8T8_9ACTN Length = 308 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 25/211 (11%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 ELP L A E++AL L +L TGARI+E L GD + Sbjct: 109 PKQRRELPHVLTAEELAALFDAPDLSCPVGLRDAAMLELFIATGARISELSRLELGDVCV 168 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 A + K R+VPL + + + + + + R Sbjct: 169 AERQVCLLGKGSK-------------------ERIVPLY-ARAIEVYERYLENGRPNLLR 208 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 G +A R + + S +TPH RH++A +L G Sbjct: 209 APALGGDACRAVFVSDRGRAMNSDALRYRFDVLKRKAGISSDITPHAMRHTFATELLGGG 268 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 L+ +Q L+GH S+S+T++YT + + + Sbjct: 269 ADLRSVQELLGHASLSTTQIYTHLTPDRLKS 299 >UniRef50_D1B6D4 Integrase family protein n=3 Tax=Synergistaceae RepID=D1B6D4_THEAS Length = 292 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 36/209 (17%) Query: 48 LPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFV 103 LP+ + P+V LL P ++++ L+ +G R++E L D + + V Sbjct: 103 LPRAISYPDVCRLLEEGPSGREAFRDRLVMELLYGSGLRVSELCDLDWDDVDVEERWIRV 162 Query: 104 QLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR 163 K R+VP S +Q M+ + + R Sbjct: 163 MGKGSKG-------------------RMVPFG-----SIVQDMLRRWGEMVGRAGPLF-- 196 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 K +T RTV + G V+PHT RHS+A H+L G L+V+Q Sbjct: 197 PGKRGAERLTQRTVHRIVSGCARRVGLFG------VSPHTLRHSFATHLLEGGASLRVVQ 250 Query: 224 SLMGHKSISSTEVYTKVFALDVAARHRVQ 252 LMGH+S+ +T+ Y V A + ++V Sbjct: 251 ELMGHESLVTTQRYLDVTAERMRFSYQVH 279 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 36/216 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + +LP +L E+ L+ +++L L+ +G R++E L R D Sbjct: 107 PKLGRKLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLNRQDIDA 166 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 V+ R+VPL++ + Q + R Sbjct: 167 GSSLLRVRGKG-------------------NKERIVPLTNYALEAARQYLEM-------R 200 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +++ + ++ R++R + A S + PH RHS+A H+L G Sbjct: 201 EDKQEALLLNYQGTRLSVRSIRRILDGLALEAG-----LSQHLHPHMLRHSFATHLLDGG 255 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 L+ +Q L+GH +SST++YT + + + Sbjct: 256 ADLRSVQELLGHAKLSSTQIYTHLTKERLREVYEQN 291 >UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga lettingae TMO RepID=XERC_THELT Length = 286 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 84/216 (38%), Gaps = 32/216 (14%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLH-YVPDLHRKMLLATLWNTGARINEALA 88 I + + + +P +LL E+ LL + + ++L+ L+ G R++E Sbjct: 90 IKDENPVEGIRNPKIRRRIPDFLLPSEIQKLLEFSMKNQRDYLMLSLLYFCGLRVSELCN 149 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L D S +P + + + + R+VPL+ + + Sbjct: 150 LRVEDLSFSPAFVKITM------------------GKGKKDRIVPLTSKLAEKLENYITS 191 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 K P + + + ++ + + + PHT RH++ Sbjct: 192 CGKSPEDYLFGSQIKIHPSTVFRIVRK-------------YTMMCGIKKRIHPHTLRHTF 238 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 A H+L G+ ++V+Q L+GH ++S+T VY V + Sbjct: 239 ATHLLQKGVNIRVVQDLLGHSNLSTTSVYLHVVDQE 274 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 35/212 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFS 95 + +LPK L + + L +L L+ TG R+ E + D Sbjct: 117 PKITRDLPKILGEQQAGDFVENAASTNEEEFLRDSAILELLYATGMRVAELCGIDLSDID 176 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 R R+ R+VP +S + + + L + E Sbjct: 177 YD-------------------RKMVRVLGKGNKERVVPFGESAH----KALRNWLDVRDE 213 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 R + R VR + A D ++PH+ RH+ A H+L Sbjct: 214 MTEDPKALFVGVRGQRINARQVRRIVDRAAKVTGVD------HLSPHSLRHTAATHLLDG 267 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 G L+ +Q L+GH S+ +T++YT V + Sbjct: 268 GADLRQVQELLGHSSMQTTQIYTHVSNKRLLE 299 >UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD6_THEPD Length = 295 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 33/214 (15%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 +A ++ LP+YL A EV +++ +L K+++ L+ TG R++E ++L D Sbjct: 98 IAGFELPKREKRLPRYLEAEEVFRMVNAAENLRDKLIVLLLFTTGLRVSELVSLRVSDVD 157 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L V+ K RLV D + L++ + L Sbjct: 158 LEKRTLRVRGKGSK-------------------ERLVYFPD-YVADLLRSYMKGLNSEWL 197 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + T + E V + VTPHT RHS+A L A Sbjct: 198 FPSE-------------TAEHIHYTTVERVLKRLKEKAGIEKKVTPHTLRHSFATLSLAA 244 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G+ ++ +Q L+GH ++++T+VY V + + Sbjct: 245 GLDIREIQELLGHSNLNTTQVYAHVSRERLKRDY 278 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 151 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 75/193 (38%), Gaps = 27/193 (13%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 + ++ L+ G R++E + L D + Sbjct: 157 MRNMAMIEVLYGCGLRVSELVGLKVSDIIFETRTLRCRGKG------------------- 197 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVA 186 R+VP+ + + + LQ + + + +++ +R +T + + + + Sbjct: 198 NKERIVPIGE-YALEVLQNYLEHDRERLRGKHKTEVLFLNSRGTALTRQGIWDILKK--- 253 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 A + PH FRHS+A H+L G L+ +Q ++GH I++T++YT + + Sbjct: 254 --WAQTHGVQENIYPHKFRHSFATHLLDHGADLRSVQEMLGHADIATTQIYTHLSRQRLL 311 Query: 247 ARHRVQFAMPESD 259 R A P +D Sbjct: 312 EVFR--KAHPRAD 322 >UniRef50_B3QWZ3 Integrase family protein n=11 Tax=Bacteroidetes/Chlorobi group RepID=B3QWZ3_CHLT3 Length = 289 Score = 151 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 31/200 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 ++LPK L EV ++L ++ K +L +++ G R +E L L D Sbjct: 103 PRKENKLPKVLSKNEVKSILVSTDNIKHKCILMLIYSAGLRRSELLNLKPTDID--SGRM 160 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 + + K + ++ + + + + L+ + + + Sbjct: 161 LIHILGAKGKKDRISLLSENL------------------------LKLLRQYYKEFHPKK 196 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 E + + +V + +A A VTPH RHS+A H+L G L+ Sbjct: 197 YLFEGLDGGKYSPTSVANILKKASLKAG-----IHKNVTPHMLRHSFATHLLEQGTDLRY 251 Query: 222 LQSLMGHKSISSTEVYTKVF 241 +Q L+GH+S +TE+YT V Sbjct: 252 IQELLGHESSKTTEIYTHVS 271 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 151 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 84/231 (36%), Gaps = 33/231 (14%) Query: 37 ALRQMSMVHDELPKYLLAPEVSAL-----LHYVPDLHRKMLLATLWNTGARINEALALTR 91 L + + + LP+ L EV + L K ++ L++ G R++E + L Sbjct: 102 ELLESPRLGEHLPEVLSTEEVDMIENSIDLSKPEGQRNKAIIEVLFSCGLRVSELVNLQL 161 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 + L + R+ RLVP+S + +L Sbjct: 162 SNLYLDEGFI-------------------RVTGKGNKERLVPISPK-AIKELNLWFLDRN 201 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 + + + R +T + + A ++PHT RHS+A Sbjct: 202 LMKIKPGEQDYVFLNRRGAHLTRTMILIMLKRQAQEAG-----IQKTISPHTLRHSFATE 256 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR---HRVQFAMPESD 259 +L G L+ +Q ++GH+SI +TE+YT + + H + A D Sbjct: 257 LLKGGADLRAIQVMLGHESIGTTEIYTHIDTTTLREEILLHHPRNAKDRPD 307 >UniRef50_D1B5G4 Integrase family protein n=2 Tax=Synergistaceae RepID=D1B5G4_THEAS Length = 297 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 92/246 (37%), Gaps = 52/246 (21%) Query: 21 GQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLAT 75 P +P+ D P+ +P L EV LL DL + ++ Sbjct: 97 EDPGKVPMLPDKPSP------------MPAILTEGEVLRLLEATAGDAPGDLRDRAMIEL 144 Query: 76 LWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLS 135 L+ G R +E +LT D L+ V+ K R++PL Sbjct: 145 LYGCGLRASELCSLTMKDLDLSSGTVRVRGKGDKV-------------------RVLPLV 185 Query: 136 DSWYVSQLQTMVAQLKIPME-RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVT 194 + + + + + R G + +W++ R R +A AA+ Sbjct: 186 GETRSALERYLKVRGTHQGPIFQGDRGGPFRREMLWKMIQRRGR----QACIAAS----- 236 Query: 195 FSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 + PH RHS A H+L G+ L+ LQ L+GH S+ +TEVYT D+ R + Sbjct: 237 ---RLHPHILRHSCATHLLRRGMDLRTLQCLLGHSSVRTTEVYTHF---DLELRDVYDRS 290 Query: 255 MPESDA 260 P + Sbjct: 291 HPRAQG 296 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 74/191 (38%), Gaps = 27/191 (14%) Query: 61 LHYVP-DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L+ P + K +L L+ TG R+ E ++L D ++ Y Sbjct: 124 LNTTPKGIRDKAMLELLYATGIRVTELISLNLEDVNVNLGYIRCC--------------- 168 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R++P+ ++ LQ + + + N +T + Sbjct: 169 -----NNTKERVIPIGTLSLIA-LQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWK 222 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 I AA + +TPHT RHS+A H++ G LK +Q ++GH IS+T+VY + Sbjct: 223 IIKVYTKQAAIE-----KSITPHTLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQ 277 Query: 240 VFALDVAARHR 250 + + + Sbjct: 278 LTKHKIKDVYN 288 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 149 bits (377), Expect = 7e-35, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 28/221 (12%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALT 90 + L + +P + ++ LL + LL L+ TG R +E L Sbjct: 89 VELLGSQKIWRRIPSVIAPHKIDDLLTAPWSEDPYWRRDRALLEVLYATGCRASEVSGLR 148 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 D L Y + KQR P Q++ R+V +T + + Sbjct: 149 MDDVHLDEGYVKCEGKGSKQRIA---------PLAQKSARVV-----------KTYLDEE 188 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + ++N R + + + + A V+PH+ RHS+A Sbjct: 189 RPRLSKKNLRDAAF---LFLSRSGKRLSRIAIWELVKKYAARAGIDPDVSPHSLRHSFAT 245 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 H+L G L+ +Q +MGH SI++T++YT V + H Sbjct: 246 HLLAGGADLRHVQEMMGHASIATTQIYTHVDQSRLKKVHAQ 286 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 149 bits (377), Expect = 7e-35, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 31/212 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLA 97 LPK L +++ LL D + K ++ ++++G RI+E + D S A Sbjct: 119 PKFAKPLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANLQDISAA 178 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 V+ RL+P+ + + ++ + P Sbjct: 179 NGEILVRGKG-------------------NKERLIPVGSKALNALKKWLIIR---PQFAN 216 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 ++ ++ R VR + E S V PH RHS+A H+L + Sbjct: 217 PDEVAVFLSSKKNRISVRQVRLRMQEWGIKQG-----ISSQVHPHKLRHSFASHILESSG 271 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q L+GH S+S+T+VYT + +A + Sbjct: 272 DLRAVQELLGHSSLSATQVYTHLDFQHLAKVY 303 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 87/233 (37%), Gaps = 41/233 (17%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVP--------------------DLHRKMLLATL 76 A + LP L EV L+ +P L K LL + Sbjct: 99 AQVKAPKGASTLPDVLSVDEVMRLMDSIPLSRHHDGKQGHGDAAADDPVMLRDKALLEFM 158 Query: 77 WNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSD 136 + TG+R++EA + R+ RLVP+ Sbjct: 159 YATGSRVSEACG-------------------VDLDDIDLDDKVARLMGKGSKQRLVPVG- 198 Query: 137 SWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFS 196 S+ L+ + + ++ ++ + +A + + + A + + Sbjct: 199 SFACEALRRYLRFGRPVLQSKS-KGAAEHRAVFLNKRGKRLSRQSVWEIIRTAGERAHIT 257 Query: 197 VPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 P+ PHT RHS+A H++ G ++ +Q L+GH S+++T++YT V ++ + Sbjct: 258 KPLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTTQIYTHVSPENLIEAY 310 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 81/211 (38%), Gaps = 35/211 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYV-PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 ++PKYL EV L+ + +++ L +G R++E L D Sbjct: 99 PKRPRQMPKYLSEDEVKRLIEASSENPRDYAIISLLAYSGLRVSELCNLKIEDVDFNERI 158 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME--RRN 158 +V R+V + + LQ + + ME + Sbjct: 159 VYVH------------------SGKGDKDRIV-VVSPRVIEALQNYLYTREDDMEYLFAS 199 Query: 159 RRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIP 218 +++ + + +++ + + A+ VTPH RH+ A +L G+ Sbjct: 200 QKSNKISRVQVFRIVKK-------------YAEKAGIKKEVTPHVLRHTLATTLLRRGVD 246 Query: 219 LKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 ++ +Q +GH S+++T++YT V + + + Sbjct: 247 IRFIQQFLGHSSVATTQIYTHVDDALLKSVY 277 >UniRef50_A4C321 Tyrosine type site-specific recombinase n=4 Tax=Bacteroidetes/Chlorobi group RepID=A4C321_9FLAO Length = 374 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 31/208 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 + +LP L E+ A+ + +L K LL+ L++ G RI EA+ L D Sbjct: 189 ERPRKEKKLPIILSGAEIKAIFSTITNLKHKALLSLLYSAGLRIGEAITLEVTDID--CQ 246 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 + K + ++ L ++ L+ + Sbjct: 247 RMLIYGRQAKGKKDRYT-----------------LLSPVFLKILRDYYVAYRP------- 282 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 + E A +D + + + A+ A T H+ RHS+A H+L G + Sbjct: 283 KNSLFEGANGSTYSDASAQKVLKNALFKAG-----IRKKATLHSLRHSFATHLLEKGTDI 337 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDVAA 247 + +Q L+GH S +T +YT V + Sbjct: 338 RYIQELLGHSSPKTTMIYTHVTQTSLKK 365 >UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia RepID=B1ZW75_OPITP Length = 324 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 83/228 (36%), Gaps = 40/228 (17%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPDL------------HRKMLLATLWNTGAR 82 + + LPK+L ++ LL L +++L L+ G R Sbjct: 119 PFLGVPLPKLEKRLPKFLTEEQMVRLLAGPQQLLASESIDAFTAHRDRLVLELLYGAGLR 178 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 ++E L G L R+ + RL P+ V+ Sbjct: 179 VSELTGLNYGAIDLEAG-------------------VARIVGKGRKERLCPIGR-VAVAV 218 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 L+ + R ++ R V+ + +A A + +TPH Sbjct: 219 LRKFRDEFAPATAPDAP---VIVTQRGTRMSPREVQLMLKRYLALA-----ELPMDLTPH 270 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 RHSYA H+L AG L+++Q L+GH +++T+VYT V + + Sbjct: 271 KLRHSYATHLLNAGADLRLVQELLGHAQLATTQVYTHVSVARLKEIYA 318 >UniRef50_C4ZGY6 Tyrosine recombinase xerC n=3 Tax=Clostridiales RepID=XERC_EUBR3 Length = 306 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 29/193 (15%) Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L ++ L++TG RI+E L D +L + K Sbjct: 140 LRDAAIVELLFSTGIRISELCNLKISDVNLIDGVILIYGKGSK----------------- 182 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVA 186 R++ + +S ++ L+ + + N ++D++VR I + + Sbjct: 183 --ERILQIGNSSVLNILKEYKNDFYNEIVQCNHF---FSSQSGKPLSDQSVRRMINKYAS 237 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 ++ D + +TPH FRH++A +L A + ++ +Q ++GH SI+ T++YT V Sbjct: 238 LSSID-----LHITPHMFRHTFATSLLEADVDIRYIQEMLGHSSINITQIYTHVAVSKQK 292 Query: 247 ARHRVQFAMPESD 259 + P D Sbjct: 293 DI--LINKHPRKD 303 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 77/215 (35%), Gaps = 30/215 (13%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + LP L EV LL + + +L L+ TG R++E ++L D Sbjct: 118 ESPRPGRRLPGLLSHDEVDRLLAAPDVRSAAGIRDRAMLELLYATGLRVSELVSLQLNDV 177 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L + K R+VP+ ++ +A + + Sbjct: 178 NLETRVLVARGKGDK-------------------ERIVPVGAPAA-DAVKAYLAVARERL 217 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 R R +T + + A +PH RHS+A H+L Sbjct: 218 LHGRRSKDLFVTPRGGRMTRQGFAKILDRCARRAGIRRRI-----SPHKLRHSFATHLLE 272 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+ +Q ++GH +S+T++YT V V + Sbjct: 273 GGADLRAVQEMLGHADVSTTQIYTHVDRTHVKRLY 307 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 27/219 (12%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTR 91 L LP L EV+ALL +P L + L + +G R E + L Sbjct: 111 DLLSAPRKAQRLPYVLKPVEVAALLDRIPADTALALRDRALFELAYASGLRAEELVMLDV 170 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 G V+ K R+VP + + + + + + Sbjct: 171 GSIEFDGERVRVEGKGAK-------------------TRIVPAGEP-ALKAIARYLDRAR 210 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 + ++ VR + V A A GV+ + V+PH RHS+A H Sbjct: 211 PALATAESDGALFLSKSGRRLSTSDVRRRLR--VWARQAAGVSTAGGVSPHALRHSFATH 268 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 +L G L+ +Q L+GH SIS+T+VYT+V + + + + Sbjct: 269 LLENGADLRSIQELLGHASISTTQVYTRVESARLRSAYA 307 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 31/207 (14%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTR 91 + + + + P L EV+ LL+ ++ K +L L+ TG R++E + L Sbjct: 96 EMIRAPKIEKKAPSILSVEEVTRLLNQPGGRTPKEIRDKAMLELLYATGIRVSELMNLNL 155 Query: 92 GDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK 151 ++ + + R +P L + + Sbjct: 156 HHINMTIGFITCSDSG--------------------RERTIPFGR-VAKKALDDYLKNSR 194 Query: 152 IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMH 211 + ++ +++ + I A +TPHT RHS+A H Sbjct: 195 PELTKKKESDWLFVNCSGGQMSRQGFWKIIKYYGEKAG-----IQTDITPHTLRHSFAAH 249 Query: 212 MLYAGIPLKVLQSLMGHKSISSTEVYT 238 ++ +G +K +Q ++GH +++T++Y Sbjct: 250 LISSGADMKAVQQILGHSDMATTQMYA 276 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 28/202 (13%) Query: 62 HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 V L LL L+ TGARI+EA+ L D L + + Sbjct: 244 EAVRRLRATALLELLYGTGARISEAVGLDVDDLDLEAASVRLHGKGGRD----------- 292 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R+VPL + ++ + + + + R ++ ++ + + Sbjct: 293 --------RIVPLGR-YAIAAVADYLRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVL 343 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A AA +G V+PH RHS+A H+L G ++V+Q L+GH S+S+T++YT V Sbjct: 344 RTAALAAGVEG------VSPHVLRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLVT 397 Query: 242 ALDVAARHRVQFAMPESDAVAM 263 + + + P + A+ Sbjct: 398 VDRLREVYAA--SHPRALGAAL 417 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 87/232 (37%), Gaps = 36/232 (15%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---------VPDLHRKMLLATLWNTG 80 ++ +L L+ + V + LP+ L +++ L ++ V + L++ G Sbjct: 94 LNSDPSLKLKT-AKVDNHLPQVLSLEQINQLFNHLVETAQTGNVNAIRDWATSELLYSCG 152 Query: 81 ARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYV 140 R+ E + L + R+ RLVP + Sbjct: 153 IRVAELVGLNLTSVD-------------------GSNRTLRVIGKGNKERLVPFGTP-AL 192 Query: 141 SQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVT 200 L+ V Q + + +R + R VR + +A A ++ Sbjct: 193 ESLRAWVTQGRPQLVNERSGQALFLGSRGGRIDQRIVRECLEKACVQAGVPV------LS 246 Query: 201 PHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 PH RH A HML G L+ +Q ++GH S+++T+ YT V A+ ++ R Sbjct: 247 PHGLRHCAATHMLEGGADLRTVQDMLGHASLATTQRYTHVDAVRLSNIMRQA 298 >UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW74_9BACT Length = 314 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 86/231 (37%), Gaps = 35/231 (15%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDF 94 + + LP L E+ LL + + +LAT + +G R++E LT Sbjct: 99 PVPRLPRNLPGVLDEEEILRLLEAPDPKTDEGIRDRAILATFYASGLRVSELAELTLDRL 158 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 +L V K+R V D ++L K+ + Sbjct: 159 NLNEEQIRVTGKGQKER--------------------VAFLDGLSCARL-------KLYL 191 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 ER T EK + A V+PHT RHS+A H+L Sbjct: 192 ERVRPSTNTAEKTLFLTRRQTGFTRQGLWLLIKGYARQCGIDRSVSPHTLRHSFATHLLS 251 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVA---ARHRVQFAMPESDAVA 262 G+ ++ +Q L+GH I +TE+YT V +A A++ + PE D A Sbjct: 252 HGMDIRSIQILLGHSDIQTTEIYTHVDIRMLAEDLAKYHPRGKRPEKDGQA 302 >UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX82_METI4 Length = 280 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 88/241 (36%), Gaps = 50/241 (20%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL-------------------H 68 I+ + + + LP+YL +V ALL+ Sbjct: 64 KKINKESPFSQVMLPKPDRNLPRYLSLEQVQALLNAPQKKWEKEKEKGKKSRWNEWQWKR 123 Query: 69 RKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQT 128 + L TL+ G R+ E +L R +F + V+ ++ Sbjct: 124 DQAWLETLYGAGLRVGELSSLKRKNFFPSDLALLVEGK-------------------RKK 164 Query: 129 HRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAA 188 R L + + L + + E +R +T R + + E +A A Sbjct: 165 ERYCILGE-VATASLCSYLESCPFESEFL------FVSSRGKPLTPRFFQLSLKEYLAIA 217 Query: 189 AADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR 248 D ++PH RH++A H+L G L+ +Q L+GH +S+T++YT V A + Sbjct: 218 GLD-----QSISPHKLRHTFATHLLEGGADLRSIQELLGHAHLSTTQIYTAVSAEHLKES 272 Query: 249 H 249 + Sbjct: 273 Y 273 >UniRef50_Q9F567 IntI2 protein n=38 Tax=Bacteria RepID=Q9F567_ECOLX Length = 325 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 82/222 (36%), Gaps = 22/222 (9%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 + LP + A EV +L + D +++ L+ G RINE L L DF Sbjct: 96 ASKPRRLPSVISANEVQRILQVM-DTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCI 154 Query: 102 FVQ-LATLKQRTEK-AARTAGRMPAGQQTHRLVPLSDSW--------------YVSQLQT 145 V K R R + + RL+ D+ Y S + Sbjct: 155 TVHDGKGGKSRNSLLPTRLIPAIKXLIEQARLIQQDDNLQGVGPSLPFALDHKYPSAYRQ 214 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 P + R + D R + AV A S VT HTFR Sbjct: 215 AAWMFVFPSSTLCNHPYNGKLCRH-HLHDSVARKALKAAVQKAGI----VSKRVTCHTFR 269 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 HS+A H+L AG ++ +Q L+GH + +T++YT V A Sbjct: 270 HSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAG 311 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 78/217 (35%), Gaps = 35/217 (16%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFS 95 V LP+ L + + +L L+ TG R++E L GD Sbjct: 119 PKVTRNLPRVLGEVQAGEFMGSAAADTEDEFRRDSAILELLYATGMRVSELCGLDLGDVD 178 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 R R+ R++P + + Q + A+ ++ Sbjct: 179 -------------------HHRRMVRVLGKGDKERMIPFGKAAADALEQWLEARDRMAKV 219 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 G R + R +R + A AD ++PH+ RH+ A H+L Sbjct: 220 EDAMFVG----VRGGRIDARQIRRIVDRTAQVAGAD------HLSPHSLRHTAATHLLDG 269 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 G L+ +Q ++GH S+ +T++YT V + + R Sbjct: 270 GADLRQVQEMLGHSSLQTTQIYTHVSSQRLLEAFRQA 306 >UniRef50_D2LLC2 Integrase family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=D2LLC2_9EURY Length = 270 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 33/212 (15%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 ++ ++LP L EV +++ ++ +++L L+ G R+ E + D Sbjct: 91 PLAKKKEKLPVVLSRDEVKRMIYGTHNIKHRLVLMFLYYAGMRLQEVRNIRWEDVEFERE 150 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 +++ A R+V L + + + + R Sbjct: 151 IIHIKV------------------AKGDKERVVFLHPNL----------KNTLEIYGRKS 182 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 + R + + ++++ + A A + VTPHT RHS+A H+L G + Sbjct: 183 KGYVFMSQRGKKYSPKSIQLIVKNAARRA-----KINKNVTPHTLRHSFATHLLEGGADI 237 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 + +Q L+GHK + +T++YT V D+ ++ Sbjct: 238 RYIQQLLGHKHLKTTQIYTHVANKDIKKLAQL 269 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 31/212 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLA 97 +LPK L + + + D + LL ++++G R+ E +L GD Sbjct: 108 PKTPKKLPKTLDVDQTAQFVAVEGDDFIHKRDRALLELIYSSGLRLAEVTSLNLGDIDWG 167 Query: 98 PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR 157 V K R +P+ S ++ L+ ++Q + Sbjct: 168 DAMVTVTGKGSK-------------------TRTLPVG-SVAIAALKDWLSQREQYAPA- 206 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 R ++ R V+ + + D PV PH RHS+A HML + Sbjct: 207 -SEPALFITQRGKRISHRAVQLRLQQLSVQQGMDN-----PVHPHMLRHSFASHMLESSG 260 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+++Q L+GH +IS+T++YT + +A + Sbjct: 261 DLRLVQELLGHANISTTQIYTHLDFQHLAKVY 292 >UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW74_CHLT3 Length = 336 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 52/240 (21%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD---------------------------LHRKMLLA 74 LP +L + L + D + +L Sbjct: 116 PKAKKTLPTFLNETQTQTLFDEILDHFNEAFYHDNRAKKHEKVNTLEWDFRYNRDRAILE 175 Query: 75 TLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPL 134 ++ G R+ E + L + + V KQ R++PL Sbjct: 176 MFYSCGLRLAELIGLNIMELDFQNGFVKVLGKGRKQ-------------------RIIPL 216 Query: 135 SDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW--IGEAVAAAAADG 192 +S L+ + K E + R+ E+ ++ VT++ R + + + + Sbjct: 217 GES-AQKTLKNYLEIKKKFFEMK--RSNVLEREAVF-VTEKGKRVYPVLVQRLVKKYLSP 272 Query: 193 VTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 VT +PH RH++A H+L G L+ + ++GH ++S+TE+YT + + ++ Sbjct: 273 VTEQKKKSPHVLRHTFATHLLNNGADLRSVSEMLGHSNLSTTEIYTHISFERLKQVYQQA 332 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 87/230 (37%), Gaps = 35/230 (15%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL-----HRKMLLATLWNTGAR 82 + D PA L + +P L + LL + LL L+ TG R Sbjct: 105 IIKDNPAELLGTTKTAA--TIPDVLSPTVAARLLDAPQPYDPLFRRDRALLELLYATGCR 162 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 +E + D + + + K RLVPL D ++ Sbjct: 163 ASEVSVMEVRDLRIEDRFCLARGKGSK-------------------ERLVPLGDP-ALAA 202 Query: 143 LQTMVAQLKIPMERRNRRTGR---TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV 199 ++ + + + ++++ +R +T + + + + A + Sbjct: 203 VEAYLEHERPKLAAKSKQGVPPWLLLSSRGQRLTRQKIWELVKQYALRCGA-----PASM 257 Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 +PHT RHS+A H+L G L+ +Q L+GH SI +T++YT V + H Sbjct: 258 SPHTLRHSFATHLLSGGADLRQVQELLGHASIGTTQIYTHVDQSRLKKIH 307 >UniRef50_A6TQC7 Phage integrase family protein n=3 Tax=Clostridia RepID=A6TQC7_ALKMQ Length = 354 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 79/212 (37%), Gaps = 30/212 (14%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALAL 89 + L LP L EV ++L V ++ K +L ++ G R+ E + L Sbjct: 157 LKKDKVLYDLPRPKKEKTLPNILSQREVLSILDSVNNIKHKSILLLTYSAGLRVGEVVRL 216 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 GD V+ K R ++ + + + + ++ W Sbjct: 217 KVGDIDSDRMLIHVR--QGKGRKDRYTILSEVALSTLRKYAMIEKPKDWL---------- 264 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 P + N +T+R+V+ A A + H+ RHS+A Sbjct: 265 --FPGGKEN-----------CFLTERSVQKTFSVACKRAKVK-----KHASVHSLRHSFA 306 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 H+L G L+ +Q L+GH S +TE+YT V Sbjct: 307 THLLEGGTDLRYIQELLGHSSSKTTEIYTHVS 338 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 28/212 (13%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGDFS 95 + LPK L EV AL+ + L+ + +G R++E +AL Sbjct: 101 AKKGRPLPKILSRQEVDALIAAADAKDAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQ 160 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 P Y V+ T RLVPL+ S + ++ + + + Sbjct: 161 KDPAYLIVKGKGG-------------------TERLVPLNPSAR-AAIKDYLDIRPLFLN 200 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 +++ +R E R +G+ + AA + V+PH RH++A H+L Sbjct: 201 AKDKANPYLFCSRGAE--GHLTRRRVGQLLDEAALEAGIDPARVSPHVLRHAFATHLLEG 258 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 G L+V+Q+L+GH IS+T+VYT V + Sbjct: 259 GADLRVVQTLLGHADISTTQVYTHVATERLKE 290 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 31/215 (14%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP---------DLHRKMLLATLWNTGARINEALALTRG 92 LP+ L A + + +LH + L ++ ++ TG R++E L G Sbjct: 126 PRPDKTLPRVLAADQTAEILHNLEVGAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIG 185 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D A + KQR +A R + + + A + Sbjct: 186 DLDFARQTVTILGKGNKQRVVPFGESAAHALK-----RWIDIGRPAIAANGHHKDADEAV 240 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + +R R + R VRT + +A V+PH RHS A + Sbjct: 241 FLGKRGGR-----------IDPRQVRTVVHQA------TSTVSGGDVSPHALRHSAATDV 283 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 L G L+V+Q ++GH S+++T++YT V + + A Sbjct: 284 LEGGADLRVVQEMLGHASLATTQIYTHVDSERLKA 318 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 82/222 (36%), Gaps = 34/222 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTRGDFSL 96 ++ LPK L ++ ALL L + +L ++ G R++E + L + Sbjct: 122 PVLPHPLPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSELVTLPVAMLNQ 181 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS------WYVSQLQTMVAQL 150 + K RLVPL + Y+ Q + +A Sbjct: 182 RQGVLRITGKGGK-------------------ERLVPLGEESQHWLQRYLEQARPSLAAD 222 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 K + + ++ + WI A V+PH RHS+A Sbjct: 223 KPIPADSDGDVPLFINTNLKRLSRQQFWRWIKHYAALVGIA----PNKVSPHVLRHSFAT 278 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 H+L G L+ LQ L+GH+SIS+T++YT + + H Sbjct: 279 HLLNHGADLRALQMLLGHRSISTTQIYTLIARQHLQQLHAQH 320 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 34/207 (16%) Query: 42 SMVHDELPKYLLAPEVSALLH------YVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 V +LP+ L +V LL + K +L L+ TG R++E +AL D Sbjct: 101 PKVDRDLPRALTPRQVDELLELPLRSPTPERIRDKAMLELLYATGVRVSELVALNVNDVD 160 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L + R++P++ S + L+ + + Sbjct: 161 LERNEVRCIGKNGRV-------------------RVLPINGSAATA-LEEYFDISRNQLA 200 Query: 156 RRNRRTGR--TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 R + + R +T + + + +TPH RHS+A+HML Sbjct: 201 RGSGSSTEALFLNHRGKRLTRQGFWLILKQYAEELGLS------DLTPHVLRHSFAVHML 254 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKV 240 AG L+ +Q L+GH SIS+T++YT + Sbjct: 255 NAGFDLRAVQELLGHTSISTTQIYTHL 281 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 79/215 (36%), Gaps = 30/215 (13%) Query: 41 MSMVHDELPKYLLAPEVSALL-----HYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 + LPK L E++ LL L + +L + +G R+ E + Sbjct: 111 LPRRWKRLPKALSDLEITQLLTLEIPETPRTLGDQAVLELAYASGLRLAELRNIRMEQLH 170 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L + V R+VP+ S V LQ + + + Sbjct: 171 LEVGFINVIGKG-------------------NKERVVPVG-SKAVQALQRYLESGRPKLV 210 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 R T+ I + V + + VTPH RHS+A H+L Sbjct: 211 TPRSPANVFLTMRGTPFAAVTLWKRIKDRVKRSG-----VARNVTPHMLRHSFATHLLEH 265 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 G L+V+Q L+GH +IS+TE+YT V + HR Sbjct: 266 GADLRVIQELLGHANISTTEIYTHVSGSRLREVHR 300 >UniRef50_UPI000196CAFB hypothetical protein CATMIT_02473 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CAFB Length = 297 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 31/216 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINEALALTRGDF 94 + +LPK L E+ ++ + D K ++ L NTG RI+E + L D Sbjct: 95 DLPKTDKKLPKVLSLEEIIKVIKSIDDSNPAGKRNKAMMLLLINTGMRISELVHLEINDI 154 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 + + V RL+PL D S + + + + Sbjct: 155 NHSVSNVSVVGKG-------------------NKERLIPL-DEETCSYVYSYMQNDRSFF 194 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 ++N + +T + + V G TPH RH++A +L Sbjct: 195 NKKNNQWLFMMND-GRRMTRENFYNILQKLVI-----GAGVRDHFTPHMLRHTFATTLLE 248 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ +Q ++GH+ IS+T +YT V + + Sbjct: 249 NHCDLRSIQVMLGHQDISTTTIYTHVTHRQILDDYN 284 >UniRef50_Q9PL53 Tyrosine recombinase xerD n=15 Tax=Chlamydiaceae RepID=XERD_CHLMU Length = 301 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 36/218 (16%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPDL---------HRKMLLATLWNTGARINEALALT 90 + V LP L EV++LL+ + +L T + TG R++E L Sbjct: 101 EHPKVWKRLPSILSTEEVNSLLNQPLNTLNLDAYIANRDTAILYTFYATGIRVSELCDLC 160 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 GD S R+ + RLVP+S + QT+ + L Sbjct: 161 IGDISDD---------------------FIRVTGKGRKTRLVPIS----IKARQTIDSYL 195 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + ER ++ E + + R+ + + + A + + ++PH+ RH++A Sbjct: 196 TMFRERFQKKNPSEEHVFLSIRGKKLERSCVWKRITFYA--KLVTTKHISPHSLRHAFAT 253 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR 248 H+L L+++Q ++GH ISSTE+YT V + + + Sbjct: 254 HLLNNQADLRIIQEMLGHARISSTEIYTHVASESIIEK 291 >UniRef50_A8SVW3 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVW3_9FIRM Length = 306 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 41/208 (19%) Query: 48 LPKYLLAPEVSALLHYVPD--------------LHRKMLLATLWNTGARINEALALTRGD 93 LPK + V +L + + L ++ L+ TG RI+E AL D Sbjct: 107 LPKTIPLHTVETILSTIYEQLNCAKTIYQRRNSLRDAAVIELLFATGMRISELCALKVND 166 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 +L + K R + + + +S L Sbjct: 167 INLYDGSILIYGKGDK-------------------ERRLQIGNPSVISILNKYEVDFHSE 207 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + N +TD+TVR I + A AA D + +TPH FRH++A +L Sbjct: 208 IMNCNHF---FANQSGRSLTDQTVRRMINKYTALAAID-----LHITPHMFRHTFATSLL 259 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A + ++ +Q ++GH SI+ TE+YT V Sbjct: 260 EADVDIRYIQEMLGHSSINITEIYTHVA 287 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 78/228 (34%), Gaps = 41/228 (17%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDL--------------------HRKMLLATLWNTGA 81 +P +L E L + L + LL L+ G Sbjct: 122 PRFSKPVPGFLSERETEKLFDELLSLPAPGEALGAVRAGDGGFTYARDRALLEVLYGCGL 181 Query: 82 RINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVS 141 RI+E + L + +L V KQ R+VPL + Sbjct: 182 RISEVIGLQYENVNLQDSLLRVSGKGGKQ-------------------RIVPLGGPARTA 222 Query: 142 QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 L+ + +N + + + R + + + V VT P Sbjct: 223 -LRNYFEVRRNFFRMKNEESPDASYVFVTKKGRR-IYPVLVQRVTRKYLSAVTEIKYKNP 280 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H RHS+A HML +G LK + ++GH ++++TE+YT V + + Sbjct: 281 HVLRHSFATHMLNSGADLKSVSEMLGHTNLTTTEIYTHVTFGRIKEVY 328 >UniRef50_A1U029 Phage integrase family protein n=2 Tax=Marinobacter RepID=A1U029_MARAV Length = 246 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 19/220 (8%) Query: 28 VAIDYPAALALRQMSMVH-DELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEA 86 V ID+ +A R M + D +PKYLL PE+ LL +++L +W TGAR++E Sbjct: 36 VEIDWDRLIAKRPMLLESLDTMPKYLLKPEILGLLESESHPMHRLILDLMWCTGARVSEV 95 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 LA+T F V L TLKQ + ++ + + + R +P+ D + +++Q+ Sbjct: 96 LAITPASFIDDGYDFGVMLKTLKQGAGRPSKRSLQ----RSPKRFIPILDRDFQTRIQSY 151 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + K + RI+ +T + V I + + + HTFRH Sbjct: 152 LWMGKFRKD-----------ERIFPITRQAVSANIDRLIDQVGGE---PPFKIGCHTFRH 197 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 S+A+H+L G PLK + L+GH+S+ S EVYT V D A Sbjct: 198 SFAVHLLLHGRPLKFVSQLLGHRSVESPEVYTNVLTFDGA 237 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 37/220 (16%) Query: 38 LRQMSMVHDELPKYLLAPEVSALLHYVPDL--------HRKMLLATLWNTGARINEALAL 89 L + +LP+ + A +V++L+ V + + + L+ G R++E L Sbjct: 106 LVRTPKAPKKLPEVMTADQVNSLIDGVGGVELERPHPARDRAIFELLYGCGIRVSELAGL 165 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 D + V+ + R VPL L+ +A+ Sbjct: 166 NLEDIDRTEGWLRVRGKG-------------------KKERQVPLPGQAA-QSLERYLAE 205 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 + E+ R +T R + + A ++ + PH+FRH+YA Sbjct: 206 RPVAREQ----PAVFVNHRRARLTTRGISGIV-----KLYATYLSNDPGIHPHSFRHAYA 256 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L G L+ +Q L+GH +S+T+ YT+V D+ A + Sbjct: 257 THLLADGADLRAIQELLGHARLSTTQKYTQVSLTDLMAVY 296 >UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteriaceae RepID=XERC_BIFLI Length = 355 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 19/190 (10%) Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 +L L+ TG R+ E +++ D + V KQR +P Sbjct: 182 AESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKGNKQRV---------VP 232 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 G R + ++ Q + ++A+ + AR + R R + Sbjct: 233 FGLPAQRAL----ETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQRIARDIVHR 288 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A A ++PH RHS A H+L G L+ +Q ++GH S+ +T+ YT V Sbjct: 289 AAREAGV------PDISPHALRHSAATHILDGGADLREVQEMLGHSSLKTTQRYTHVSIE 342 Query: 244 DVAARHRVQF 253 + R+ F Sbjct: 343 QLKNRYGQAF 352 >UniRef50_Q2GEQ3 Tyrosine recombinase XerD n=2 Tax=Neorickettsia RepID=Q2GEQ3_NEOSM Length = 305 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 33/216 (15%) Query: 31 DYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-----LHRKMLLATLWNTGARINE 85 + +L L + ++V LP+YL EV +LL ++ L +L L+++G R++E Sbjct: 94 NPAQSLELPKKTLV---LPRYLTKEEVFSLLTFLEAGQPATLRLYAILEILYSSGMRVSE 150 Query: 86 ALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQT 145 + + D R + + + R++P S + L+ Sbjct: 151 LINMKVSDI----------------RPLLNGQQHIIIVGKGRKERILPFSKK-AIQVLKL 193 Query: 146 MVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFR 205 + + GR ++ R +G+ + A ++PH R Sbjct: 194 YLTSYQSNSPWLFPGAGRKDRP--------MSRQRLGQLLKELALKCKIDPKRISPHVIR 245 Query: 206 HSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 HS+A H+L G+ +KV+Q L+GH I++T++YT + Sbjct: 246 HSFATHLLDNGMDIKVVQDLLGHAQITTTQIYTHIS 281 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 87/237 (36%), Gaps = 42/237 (17%) Query: 34 AALALRQMSMVHDELPKYLLAPEVSALLH---------------------YVPDLHRKML 72 + L+L + ++P+++ E L + + Sbjct: 114 SPLSLVVTPRLDKKVPRFVSEEEARQLFRRFESQEDNAALQGDGKKAEVRQFETFRDRAV 173 Query: 73 LATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLV 132 L L+ G R++E +AL R D L + V KQ R+V Sbjct: 174 LEVLYGCGLRLSELIALERADVDLVHGFLKVTGKGRKQ-------------------RIV 214 Query: 133 PLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADG 192 PL + V L+ + RTG + + + R + + + + Sbjct: 215 PLGEP-AVEALRKYFEVRRNFFRIPLERTGESSRVFVTS-RGRQLYPMLVQRMTKRYLTP 272 Query: 193 VTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 V+ S PH RHS+A HML G LK + ++GH S+++TE+YT V + + Sbjct: 273 VSESEKKNPHILRHSFATHMLNGGADLKSVSEMLGHSSLTTTELYTHVTFSRLKEIY 329 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 30/216 (13%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALL---HYVPDLHRKMLLATLWNTGARINEALALTRGD 93 A + LP+ L + +AL+ H D LLA ++ G R++EA+ L D Sbjct: 98 AGVRPPKKSARLPRTLPPEQTAALMQPTHASADRRDLALLAVMYGAGLRVSEAVGLDLHD 157 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 L V KQR TA + RL+ L + + Sbjct: 158 IDLHSCELRVLGKGSKQRIVPLPTTAADLLGQWLDERLLGLVR-----------DERAVF 206 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + R +R +T R+V+ + + AD + VTPH RHS+A H+L Sbjct: 207 LNRFGQR-----------LTARSVQRMLKTRALESGAD-----ISVTPHRLRHSFATHLL 250 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G+ L+ +Q L+GH S+++TE YT + + + Sbjct: 251 AGGVDLRAIQELLGHASLATTERYTHLDIAKLTEVY 286 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 146 bits (369), Expect = 6e-34, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 80/216 (37%), Gaps = 37/216 (17%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDL--------HRKMLLATLWNTGARINEALALTRGD 93 LP +L + L+ +L L+++G R++E L D Sbjct: 113 PKREQRLPFHLNIDQTVTLIEAPGHTGQEQPTFARDTAILELLYSSGLRVSELTGLAVAD 172 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 A VQ K R+VP+ + + Q + + ++ Sbjct: 173 LDRAAGMVRVQGKGGK-------------------ERIVPVGSAALEALEQYLAGRGQLA 213 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + R + + RTV + A G+ ++PHT RH++A HML Sbjct: 214 DDAPLFLGCRGAR-----INRRTVAQLVKR-----WASGIPAFRSISPHTLRHTFATHML 263 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+ +Q L+GH S+S+T+ YT V + + Sbjct: 264 EGGADLRSIQELLGHSSLSTTQKYTHVGLDRLLEVY 299 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 76/216 (35%), Gaps = 35/216 (16%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD------LHRKMLLATLWNTGARINEALALTRGD 93 + LPK L SALL D L + + L++ G R++E L D Sbjct: 117 RPPKSPKTLPKALPVDATSALLDAPIDPEDDLALRDQAMFELLYSCGLRLSELTGLDLAD 176 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 L R++P+ + + + + P Sbjct: 177 LDLGEGLLTAHGKG-------------------NKTRILPIGRQARQALERWLAIRPSQP 217 Query: 154 MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 E ++ R V + + +D V PH RHS+A H+L Sbjct: 218 GE-----GAVFTGKSGRRLSGRQVEKRLEQWAQRHGSD-----RHVHPHMLRHSFASHLL 267 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 + L+ +Q L+GH ++S+T++YT + +A + Sbjct: 268 QSSGDLRAVQELLGHANLSTTQIYTSLDFQHLAKVY 303 >UniRef50_C9NXY9 Integron integrase IntI2 n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXY9_9VIBR Length = 321 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 26/224 (11%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 + +LP + EV +L ++ K+++ L+ +G RI+E L L D L+ Sbjct: 97 ATKQRQLPVVITPNEVKQVLSHLNG-KEKLIVELLYGSGLRISECLRLRVQDIDLSNLSI 155 Query: 102 FVQ-LATLKQRT---EKAARTAGRMPAGQQTHRLVPLSDSW--------------YVSQL 143 V+ K R K ++ Q V ++D+ Y + Sbjct: 156 TVRDGKGKKDRQTLLSKQCVDVLKLLIEQAEQ--VQIADNKHGIGPSLPYAIHKKYPNAF 213 Query: 144 QTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 + + P + ++ + +R + AVA T + VT HT Sbjct: 214 RKLAWMFIFPSPSISHSQYNSDHPSRHHLHSSVIRKALSRAVAKT-----TINKKVTCHT 268 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 FRHS+A H+L AG ++ +Q L+GH + +T++YT V A Sbjct: 269 FRHSFATHLLQAGRDIRSVQELLGHNDVKTTQIYTHVIGQHYAG 312 >UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD8_WEIPA Length = 308 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 78/221 (35%), Gaps = 33/221 (14%) Query: 41 MSMVHDELPKYLLAPEVSALLH------YVPDLHRKMLLATLWNTGARINEALALTRGDF 94 + LP+Y E++ + L +LL L+ TGAR++E +T + Sbjct: 108 LKKPGQHLPRYFYQKELTKMFDVVMTDQSALGLRNHLLLEMLYGTGARVSEIANMTLQNV 167 Query: 95 SLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM 154 + R+VP + L + + + Sbjct: 168 DSHARVVTITGKG-------------------NKTRIVPFGR-YAADALAKYLKTGRPVL 207 Query: 155 ERRNRRTGR--TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + T R VT + + + + + VT H FRH++A + Sbjct: 208 ASKQADTSNKLFLNQRGAPVTTAGIEYILKQIGKKSG-----LTQEVTAHMFRHTFATDL 262 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 L L+ +Q L+GH S+S+T++YT V + +R F Sbjct: 263 LNNQADLRTVQQLLGHSSLSTTQIYTHVTTDALQKSYRNFF 303 >UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobia RepID=B2UMQ9_AKKM8 Length = 300 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 42/230 (18%) Query: 35 ALALRQMSMVHDELPKYLLAPEVSALLHYVPDL------------HRKMLLATLWNTGAR 82 + + LP +L ++ LL +L ++ G R Sbjct: 97 PMTGVSLPRRKKTLPVFLTLNQMLELLELPYKTAVPANAPAWLPYRDAAILELFYSCGMR 156 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 ++E + L G V K R++P+ ++ Sbjct: 157 LSELVGLDVGSVDHRFRGVKVMGKGRK-------------------ERILPVGTP-ALAA 196 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 L+T V+ +P + + ++ R+V+ + + V + + ++PH Sbjct: 197 LETYVSMACLP-----KNSPLFVSRIGTRLSARSVQMMLNKYVKLS-----SIPFTISPH 246 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQ 252 RH++A H+L AG L+ +Q L+GH S+S+T++YT V +A +R Sbjct: 247 KIRHTFATHILEAGADLRSVQELLGHASLSTTQIYTHVTRARMAEVYRQA 296 >UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia RepID=XERC_PELTS Length = 306 Score = 146 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 84/214 (39%), Gaps = 26/214 (12%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 + LP++L E L+ + + LL TL+ G RI+E Sbjct: 106 PKLEKRLPRFLYEDEAKELVEAPDTKQPLGMRDRALLETLYAGGLRISE----------- 154 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 L L + R+ + RLVPL S V LQ +A+ + P Sbjct: 155 --------LVLLDLGDLDISSGYIRVTGKRARERLVPLG-SMAVEALQAYLAKAR-PRLM 204 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 N + A + + + V+ ++PHT RHS+A H+L AG Sbjct: 205 ANSVAKKINNALFLNCRGERLSARGIRKILDKYVEKVSLERKISPHTLRHSFATHLLNAG 264 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ +Q LMGH +SST+VYT V + +R Sbjct: 265 ADLRSVQELMGHVRLSSTQVYTHVTGERLKKVYR 298 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 35/238 (14%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYV-----------PDLHRKMLLATLWNTGA 81 AL + ++P +L +V LL + L +++TG Sbjct: 111 ENPAALVAYPKLGTKIPSFLGVDDVFHLLDSLNAGAARAGASWRRCRNWALFECMYSTGV 170 Query: 82 RINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVS 141 R++E + D V K R+VP+ + Sbjct: 171 RVSELAGMDESDVDFHEGMVRVLGKGSK-------------------ERIVPVGGKALDA 211 Query: 142 QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 + E R + AR +T R+V + + ++P Sbjct: 212 VKLYLRVLDSQFPEARRMGSALFRNARGRRLTTRSVHRLLRMELRRCG-----LWQHLSP 266 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 H RH++A H+L +G L+ +Q ++GH ++S+T+ YT V + + D Sbjct: 267 HGLRHTFATHLLNSGADLRAIQEMLGHSNLSTTQRYTHVHVDQLMKVYDAAHPRSRRD 324 >UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacteria RepID=Q1IMN8_ACIBL Length = 313 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 81/214 (37%), Gaps = 38/214 (17%) Query: 48 LPKYLLAPEVSALLHYVPD-----------LHRKMLLATLWNTGARINEALALTRGDFSL 96 LPK L A EV L P L + +L + R++E + + D L Sbjct: 112 LPKSLSADEVLQTLQGPPRVLDTKESQALALRDRAMLEVFYAGALRVSEMIGVRMEDAKL 171 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 Y V+ K R+VPL S V+ +++ + + + Sbjct: 172 DLGYMMVRGKGDK-------------------ERIVPLGQSALVA-VKSYLESGREVLCA 211 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 +++ + V + A A+ +PH RHS A HM+ G Sbjct: 212 GKTSPILFVGKGCRKLSRQRVWQMVSAASQASG-------RHASPHMLRHSCATHMVENG 264 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 L+ +Q+++GH IS+T++YT + + HR Sbjct: 265 ADLRTVQTILGHADISTTQIYTHLALDRLKQVHR 298 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 79/219 (36%), Gaps = 34/219 (15%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD---------LHRKMLLATLWNTGARINEALALT 90 QM LP L + L L ++++ L+ TG R++E L Sbjct: 100 QMPKARRTLPAVLRQDQARDALDAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLD 159 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 D +R R+ R VP + L+ + Sbjct: 160 IDDVD-------------------TSRRLLRVLGKGDKQRTVPFGEP-AEQALRAWLTSG 199 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + AR + R RT + E V A A + PH RHS A Sbjct: 200 RPALATAESGPALLLGARGRRLDPRQARTVVHETVGAVAGAP-----DIGPHGLRHSAAT 254 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L G L+++Q L+GH ++++T++YT V + A H Sbjct: 255 HLLEGGADLRIVQELLGHSTLATTQLYTHVTVARLRAVH 293 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 31/217 (14%) Query: 37 ALRQMSMVHDELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRG 92 LPK L EV+ LL D + + ++ ++ G R+ E + + Sbjct: 108 KGVSAPRKKRPLPKNLDVDEVNQLLEVNEDDPLAIRDRAIMELMYGAGLRLAELVDIDVR 167 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D L V K+R A A R + +A Sbjct: 168 DVHLRSGEIRVIGKGNKERKVPFAGMAVEWVGKWLKVR--------------SGLADPSE 213 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 P ++ R ++ R+V+ + E A + +TPH RHS+A H+ Sbjct: 214 PALFVSKLGTR--------ISHRSVQKRMAEWGQKQA-----VASHITPHKLRHSFATHI 260 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L + L+ +Q L+GH++IS+T++YT + +A + Sbjct: 261 LESSNNLRAVQELLGHENISTTQIYTHLDFQHLADVY 297 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 39/223 (17%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDL--------------HRKMLLATLWNTGARINEAL 87 + LP L ++S LL +L +++ G RI EAL Sbjct: 111 AKKDKSLPLILSREDISTLLSSPAPYWAQKKGKNNDFMASRDAAILEIIYSGGLRIQEAL 170 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 + +L ++ + R L + + Q Sbjct: 171 DINFDQINLEESTL-------------------KIFGKGKKQRTAYLGNPAKQALEQYFA 211 Query: 148 AQLKIPMERRNRRTGRTEKAR-IWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 + + + + + ++ R+++ + A +TPH RH Sbjct: 212 CRKNAELNWTSANDPVFINLKDLKRLSARSIQRNL-----KAYLQSCQLPPDITPHKLRH 266 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 S+A H+L AG L+ +Q L+GH+++S+T++YT + + + Sbjct: 267 SFATHLLDAGADLRSVQELLGHENLSTTQIYTHISTDRLLQAY 309 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 25/185 (13%) Query: 68 HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQ 127 ++ +++ G RI+E L GD L V+ K+R R + + Sbjct: 150 RDLAMVEVIYSGGLRISETTGLDMGDIDLIGGIARVRGKGKKERIAVLGRPSQK------ 203 Query: 128 THRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAA 187 L+ R + +T R+ + + + A Sbjct: 204 --------------ALRNYFKLRSTVGGGRAPGSPVFLNKFGKRLTPRSFQRNLKNYLIA 249 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 A +TPH RHS+A H+L AG L+ +Q ++GH+++S+T++YT V A + Sbjct: 250 A-----NLPPDLTPHKLRHSFATHLLDAGADLRSVQEMLGHENLSTTQIYTHVSAERMKE 304 Query: 248 RHRVQ 252 ++ Sbjct: 305 VYKEA 309 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 31/205 (15%) Query: 42 SMVHDELPKYLLAPEVSAL-----LHYVPDLHRKMLLATLWNTGARINEALALTRGDFSL 96 + ELP + +V L L L + LL +++G RI+E ++L D Sbjct: 119 PRLPKELPSPITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDF 178 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 ++ + R++P++ + L+ + + Sbjct: 179 NSNLIRIRGKG-------------------KKERIIPIT-TLAAQWLKQYLNHPERAGVA 218 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 ++ + +T R++ + + + G +TPHT RH+ A H L G Sbjct: 219 KDSQ-AIFLNCFGTRLTTRSIDRKFQKYLRLSGLSG-----NITPHTIRHTIATHWLENG 272 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVF 241 + LK +Q+L+GH S+ +T +YT V Sbjct: 273 MDLKTIQALLGHSSLETTTIYTHVS 297 >UniRef50_A4CN61 Tyrosine type site-specific recombinase n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN61_9FLAO Length = 386 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 77/204 (37%), Gaps = 31/204 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYP 101 +LP L EV LL +L + L A L+ G R+ E + L + + Sbjct: 180 PRKDRKLPGVLGKAEVMRLLQQTRNLKHRTLTALLYGCGLRVGELINLQLAEVDIPRRQL 239 Query: 102 FVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT 161 V+ K R ++ RL+PL + + + Sbjct: 240 LVR--AGKGRKDRRVVLP---------ERLLPLLGDYLTAYAPSRYL------------- 275 Query: 162 GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKV 221 E + + ++R ++ A + VTPH RHSYA H+L G+ ++ Sbjct: 276 --AEGRPGQQYSATSIRAFL-----KANSRRAGILKKVTPHMLRHSYATHLLEQGVDIRY 328 Query: 222 LQSLMGHKSISSTEVYTKVFALDV 245 +Q L+GH +T VYT V D+ Sbjct: 329 IQELLGHARPETTMVYTHVSRQDL 352 >UniRef50_A4BJY9 Resolvase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJY9_9GAMM Length = 262 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 19/222 (8%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEAL 87 + ID+ L LR + HD YLL PE++ L+ ++L ATLW TG RI+E L Sbjct: 43 IVIDWARFLKLRPWVLQHDPELSYLLLPEMTQLIESARTEQMRVLFATLWVTGGRISEVL 102 Query: 88 ALTRGD-FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 A+T + + L TLK+R Q +RLVP+ D Y + L+ Sbjct: 103 AMTPAHCINDDHLGQGIALPTLKKRN-------------GQPYRLVPVVDPHYWAMLKRF 149 Query: 147 VAQLK----IPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 + + + P+ + +T ++A+ +T RTV+ W +A+ + + VTPH Sbjct: 150 LGEHRGGQHAPIFQSRTKTTDAKRAKPKALTSRTVQRWTDDAMERL-REHYNPGLRVTPH 208 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 TFRHS+A++ L G ++V+ +GH S+ TE Y KV +LD Sbjct: 209 TFRHSFAVNALLHGRDIQVISGWLGHASVRETERYLKVLSLD 250 >UniRef50_Q9A437 Tyrosine recombinase xerD n=11 Tax=Alphaproteobacteria RepID=XERD_CAUCR Length = 305 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 32/222 (14%) Query: 42 SMVHDELPKYLLAPEVSALL------HYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 LPK L E+ LL L ++ ++ +G RI+E LAL + Sbjct: 103 PKAGRPLPKVLERDEIERLLAAASAKDSAQGLRLACMIELIYASGLRISELLALPLLALA 162 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL-KIPM 154 P Y V+ K RL PL+D+ + +V + +P Sbjct: 163 RDPAYLIVKGKGGK-------------------ERLAPLNDAARAAVKAYLVERPAFLPK 203 Query: 155 ERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLY 214 +++ + +T R V + +A AA D V+PH RH++A H+L Sbjct: 204 GQKDSPWLFPSRGATGRLTPRRVGQLLEDAAIAAGID----RQKVSPHVLRHAFATHLLE 259 Query: 215 AGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 G L+V+Q+L+GH I++T++YT V +A H VQ P Sbjct: 260 GGADLRVIQTLLGHADIATTQIYTHVAGEHLA--HIVQTKHP 299 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 34/213 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 LPK L +ALL + D + + +++ G R++E +AL D Sbjct: 97 PKRDKLLPKALPVDGTAALLDRIEGESELDARDRAIFELVYSCGLRLSETVALNLDDVDF 156 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + ++ K RLVP+ + +L+T + + M+ Sbjct: 157 SDSLLRIRGKGGK-------------------ERLVPIGAEAML-RLRTWLGERSAGMDE 196 Query: 157 RNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAG 216 GR ++ +R W A V PH RHS+A HML + Sbjct: 197 PALFLGRHGHRLGGRQVEKRLRDW---------AIKTGAGQHVHPHMLRHSFASHMLQSS 247 Query: 217 IPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 L+ +Q L+GH ++SST++YT + +A + Sbjct: 248 GDLRAVQELLGHANLSSTQIYTALDFQHLAKVY 280 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 31/214 (14%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSAL-----LHYVPDLHRKMLLATLWNTGARINEAL 87 + + + ELP L +V AL L V + LL +++G RI+E Sbjct: 110 ENPAEMIRGPRLPQELPSPLTYEQVLALMAAPELDKVTGFRDRCLLELFYSSGLRISEIT 169 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 AL R D ++ + R+VP++ V LQ + Sbjct: 170 ALNRADIDFQSHLLHIRGKG-------------------KKERIVPMT-KVAVQWLQDYL 209 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 ++ + + ++ R++ + + G +TPHT RH+ Sbjct: 210 NHPDRASVEQDHQACFLNR-FGKRLSTRSIDRKFQQYLLKTGLSG-----SITPHTIRHT 263 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A H L G+ LK +Q L+GH S+ +T +YT V Sbjct: 264 IATHWLERGMDLKTIQLLLGHTSLETTTIYTHVS 297 >UniRef50_Q0C629 Tyrosine recombinase XerD n=2 Tax=Hyphomonadaceae RepID=Q0C629_HYPNA Length = 309 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 19/210 (9%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-DLHRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 E+P L EV L+ D K L+ L+ G R E + L G+ Sbjct: 99 PSPEREVPDVLSREEVGRLIEACGNDKRLKCLVELLYGAGLRATELVTLRVGNLP----- 153 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVS---QLQTMVAQLKIPMERR 157 +++ + + RL PL + ++ L+ A L R Sbjct: 154 --------RRKAGQWMSADIIIRGKGGKDRLCPLGRAALIALSEWLEVREASLPDNPLMR 205 Query: 158 NRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 +++ G +R E R +G+ + A + S V PH RH+YA H+L G Sbjct: 206 SKQEGFVFPSRGKE--GHLTRRRLGQMLEDLAGEAGLRSERVYPHALRHAYATHLLQGGA 263 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 L+V+Q+L+GH I++T++YT V ++A Sbjct: 264 DLRVVQTLLGHADIATTQIYTHVLTDELAE 293 >UniRef50_A5UKA5 Integrase-recombinase protein, phage integrase family n=2 Tax=Methanobrevibacter smithii RepID=A5UKA5_METS3 Length = 302 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 47/212 (22%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-------------DLHRKMLLATLWNTGARINEALA 88 P +L EV LL + L K+++ L+++G R++E + Sbjct: 120 PKRIKSPPNFLTQKEVKQLLDSITWDENSDSDFRIITKLRDKLIVTLLYSSGLRVSELIN 179 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L+ + + + G+ R++ L D +Q Sbjct: 180 LSVDNVNFEGKQLSI--------------------VGKNNSRVI-LLDESTKQLIQKY-- 216 Query: 149 QLKIPMERRNRRTGRTE-KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 +E+R +++ +T R V+ I + + + +TPH RHS Sbjct: 217 -----LEKRTQKSNYLVVNKSGNPLTPRYVQLMIKKYGNESGIE-----KKITPHILRHS 266 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 YA H+ G+ +K++Q L+GH ++S+T++Y++ Sbjct: 267 YATHLFEQGVNIKIIQQLLGHSNLSTTQIYSQ 298 >UniRef50_D1AMH6 Integrase family protein n=4 Tax=Fusobacteriaceae RepID=D1AMH6_SEBTE Length = 304 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 28/221 (12%) Query: 47 ELPKYLLAPEVSALLHYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +LP+ L E+ ++ +P+ + K+++ L TGARI+E L L D Sbjct: 103 KLPEVLKLSEIKDIIDAIPNTPEGVRDKIIIKILVATGARISEVLTLDIKDV-------- 154 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLK--IPMERRNRR 160 E R+ +RL+P+ S +++ + + + +ER+ + Sbjct: 155 ----------ENQDYEFIRVLGKGSKYRLIPIY-SQLEEEIKAYIENDRKILVLERKEKE 203 Query: 161 TGRTEKARIWEVTDR---TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGI 217 + K + E+ + R A V PH FRHS A ++ G Sbjct: 204 SENKNKKKGHELEYKLFLGTRRENFWKRLKKYAKNAKIEKNVYPHIFRHSVATMLINNGA 263 Query: 218 PLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPES 258 ++++Q ++GH +IS+TE+YT V ++ + E Sbjct: 264 DIRIVQEILGHVNISTTEIYTHVGKRELKEIYNKVKIGDEE 304 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 144 bits (363), Expect = 3e-33, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 30/205 (14%) Query: 38 LRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRG 92 L + PK L +V LL K +L L+ +G +++E + L+ Sbjct: 97 LLDNPKPERKPPKSLTVEQVDKLLSAPDSGTPQGARDKAMLELLYASGIKVSELVNLSIH 156 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D L + ++ K R++P++ + V ++ Sbjct: 157 DIHLEMRFLRCAVSGGK-------------------ERILPIT-PIAAESVAFYVRDMRD 196 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 + R + +T + I + A D +TPHT RHS+AMH+ Sbjct: 197 KLMRDAGEDALFLNSLGTRLTRQGFWKIIKKYGKLAGID-----EDITPHTLRHSFAMHL 251 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVY 237 L G L+ +Q ++GH ++S+T +Y Sbjct: 252 LGNGADLRSVQEMLGHSALSTTGMY 276 >UniRef50_P55632 Putative integrase/recombinase y4qK n=15 Tax=Proteobacteria RepID=Y4QK_RHISN Length = 308 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 31/223 (13%) Query: 25 SLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARIN 84 S+ + D+ A L + +LP L EV L V DL +L T + G RI+ Sbjct: 94 SVTLERDWVPAEVL-PLPKKPQKLPIILSPDEVQHFLGCVLDLKHHAILTTCYAAGLRIS 152 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 EA+ L D V+ Q R V LS L+ Sbjct: 153 EAVQLKPTDIDSQRMVVRVE------------------QGKGQKDRYVMLSPKL----LE 190 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 + ++P + G I R +G+A A A D S PVTPH+ Sbjct: 191 ILRDYWRMPRPKEWLFPGDRAGHPI-------TRDAVGQACAKAH-DLSRLSKPVTPHSL 242 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 RH++A+H+L AG ++ +Q L+GH+S+++T Y ++ V A Sbjct: 243 RHAFAVHLLEAGADVRTIQLLLGHRSLATTAHYLRIATNKVCA 285 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 79/229 (34%), Gaps = 34/229 (14%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD---------LHRKMLLATLWNTGARINEALALT 90 ++ LP + V +L P L K +L L+++G R+ E L Sbjct: 108 KLKRQPRPLPGMVDIETVHQILDQAPPDKPIEQQLWLRDKAILELLYSSGLRLAELQGLM 167 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 D R R+ R+VP L + Sbjct: 168 IKDIDFN-------------------RQLLRITGKGNKTRIVPFGQK-AKDSLIEWLKIY 207 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 +I N + R +T R + + A +V + PH RH +A Sbjct: 208 RIWQGEFNLDSAVFISQRGNRLTPRQIENRVKLQAQRAG-----VNVDLHPHLLRHCFAS 262 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 HML A L+ +Q ++GH ++S+T++YT V +A + + D Sbjct: 263 HMLSASGDLRSVQEMLGHSNLSTTQIYTHVDFDQLARVYDQTHPRAQKD 311 >UniRef50_Q56754 Integrase n=2 Tax=Flavobacteriaceae RepID=Q56754_9FLAO Length = 259 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 75/201 (37%), Gaps = 23/201 (11%) Query: 43 MVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPF 102 +LP L EV +L L K+L+ L+ G R E L D Sbjct: 63 KREKKLPVVLSKQEVWQMLSGCKLLKHKILIGILYGCGLRCMEVRNLRLCDLDFDRKQLK 122 Query: 103 VQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG 162 V + + R +PLS+ + + A+ R Sbjct: 123 V------------------VQGKGKKDRYLPLSEHLIRGLKKYIEAEKPEDYLFGEPRGN 164 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 R + R V+ + +A A V+ HT RHS+A H+L G+ + + Sbjct: 165 RAGGEFDSRYSQRGVQWAVKQASKTA-----NILKEVSVHTLRHSFATHLLEDGMDILSI 219 Query: 223 QSLMGHKSISSTEVYTKVFAL 243 ++L+GH+SI +T +Y ++ L Sbjct: 220 KNLLGHESIDTTLIYLQIAQL 240 >UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHC9_ACHLI Length = 306 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 86/216 (39%), Gaps = 33/216 (15%) Query: 42 SMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSL 96 V LP + ++ L + ++L L++ G R +E + L D L Sbjct: 102 PKVAKTLPHIIDEEAINYLFDSIDTSKPLGYRNLVILDLLYSCGVRASELINLEIKDIYL 161 Query: 97 APPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER 156 + + + R + L + + +++ ++ +++ + Sbjct: 162 SSGQILIHGKG-------------------KKDRYIILHEK-LIEEIRHYLSFVRVTLLS 201 Query: 157 RNRRTGRTE---KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHML 213 + T + + + +T R +R + + + + + + PH RH++A ML Sbjct: 202 KGDDTNQQKLFINYKGGPLTVRGLRVILNQMIKDSGE-----TYAIHPHMLRHAFATTML 256 Query: 214 YAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G L+V+Q L+GH+ + ST++YT V + ++ Sbjct: 257 NHGADLRVVQELLGHEHLKSTQIYTHVSKEQLKEKY 292 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 34/219 (15%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPD---------LHRKMLLATLWNTGARINEALALT 90 Q+ LP L + L + ++++ L+ TG R++E L Sbjct: 100 QVPKARRTLPSVLRQDQARDALEAAESGAQQGDPLAVRDRLVVEMLYATGIRVSELCGLD 159 Query: 91 RGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL 150 D +R R+ R VP + + + L + + Sbjct: 160 VDDVD-------------------TSRRLLRVLGKGNKQRTVPYGEPAH-AALTAWLHEG 199 Query: 151 KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAM 210 + + + AR + R RT + + V+A + PH RHS A Sbjct: 200 RPALATADSGPALLLGARGKRLDPRQARTVVHQTVSAVGGAP-----DIGPHGLRHSAAT 254 Query: 211 HMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 H+L G L+V+Q L+GH S+++T++YT V + A H Sbjct: 255 HLLEGGADLRVVQELLGHSSLATTQLYTHVTVARLRAVH 293 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmic... 280 4e-74 UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepI... 270 4e-71 UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes Rep... 270 5e-71 UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes R... 269 9e-71 UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoide... 264 2e-69 UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID... 263 5e-69 UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales Re... 263 6e-69 UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2L... 261 2e-68 UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmi... 261 2e-68 UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus Rep... 258 2e-67 UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=... 256 4e-67 UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID... 256 5e-67 UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacter... 255 9e-67 UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteri... 255 1e-66 UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclass... 255 1e-66 UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Achol... 254 2e-66 UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID... 254 2e-66 UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 254 2e-66 UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes Re... 254 3e-66 UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus R... 253 3e-66 UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus ca... 253 4e-66 UniRef50_P18021 Resolvase n=83 Tax=root RepID=REDM_ECOLX 253 5e-66 UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoide... 252 9e-66 UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acine... 252 1e-65 UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactob... 251 2e-65 UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira Rep... 251 2e-65 UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endorif... 250 3e-65 UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatell... 250 4e-65 UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydotherm... 250 4e-65 UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfov... 250 4e-65 UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus ps... 249 6e-65 UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfov... 249 8e-65 UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacteri... 248 1e-64 UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH 248 1e-64 UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomyc... 248 2e-64 UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas a... 247 3e-64 UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae ... 246 4e-64 UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Mora... 246 4e-64 UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID... 246 4e-64 UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Can... 246 6e-64 UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae... 246 7e-64 UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriac... 246 7e-64 UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcu... 246 7e-64 UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methano... 246 8e-64 UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexib... 245 9e-64 UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium Re... 245 1e-63 UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae R... 245 1e-63 UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heli... 245 1e-63 UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Ter... 245 2e-63 UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes Rep... 244 2e-63 UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula stal... 244 2e-63 UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=... 244 3e-63 UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candid... 243 3e-63 UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes... 243 3e-63 UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella mu... 243 3e-63 UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteri... 243 4e-63 UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae ... 243 5e-63 UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteri... 243 5e-63 UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobac... 243 6e-63 UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=... 242 9e-63 UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorel... 242 1e-62 UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n... 241 2e-62 UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobi... 241 2e-62 UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris... 241 2e-62 UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepI... 241 2e-62 UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdema... 240 3e-62 UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC 240 4e-62 UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteri... 240 5e-62 UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication,... 240 5e-62 UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Clo... 240 5e-62 UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium ... 239 7e-62 UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter ... 239 7e-62 UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cell... 239 7e-62 UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia Rep... 239 8e-62 UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobac... 239 9e-62 UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacte... 239 9e-62 UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Ter... 239 1e-61 UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobac... 238 1e-61 UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kr... 238 2e-61 UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desul... 237 2e-61 UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcu... 237 2e-61 UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovi... 237 2e-61 UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix... 237 3e-61 UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteoba... 237 3e-61 UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter ... 237 3e-61 UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aci... 236 5e-61 UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5... 236 5e-61 UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leucon... 236 5e-61 UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium ur... 236 5e-61 UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteo... 236 7e-61 UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachl... 236 7e-61 UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteoba... 236 8e-61 UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula bal... 235 1e-60 UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales R... 235 1e-60 UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 235 1e-60 UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobact... 235 1e-60 UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=... 235 1e-60 UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriacea... 234 2e-60 UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=... 234 2e-60 UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobactera... 234 2e-60 UniRef50_B0VFS7 Site-specific recombinase, phage integrase famil... 234 2e-60 UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured act... 234 2e-60 UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteob... 234 3e-60 UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteri... 233 4e-60 UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacil... 233 4e-60 UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovi... 233 5e-60 UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 fami... 233 6e-60 UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteob... 233 6e-60 UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneo... 233 6e-60 UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylaci... 232 7e-60 UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspi... 232 7e-60 UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevo... 232 8e-60 UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdema... 232 8e-60 UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=... 232 9e-60 UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID... 232 9e-60 UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales ... 232 9e-60 UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibri... 232 9e-60 UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax... 232 1e-59 UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus... 232 1e-59 UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacte... 231 1e-59 UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vad... 231 1e-59 UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae D... 231 1e-59 UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter suc... 231 2e-59 UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular orga... 231 2e-59 UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonad... 231 2e-59 UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteri... 231 3e-59 UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Delta... 230 3e-59 UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter ... 230 4e-59 UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadale... 230 4e-59 UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrion... 230 4e-59 UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria... 230 4e-59 UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobi... 230 4e-59 UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia... 230 5e-59 UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera arane... 230 5e-59 UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis va... 230 5e-59 UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillu... 230 6e-59 UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibriona... 229 7e-59 UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella va... 229 8e-59 UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococca... 229 9e-59 UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio jap... 229 1e-58 UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=unculture... 228 1e-58 UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua... 228 1e-58 UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistip... 228 1e-58 UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria... 228 2e-58 UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton ... 228 2e-58 UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus ... 228 2e-58 UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria... 227 2e-58 UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium Re... 227 2e-58 UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinom... 227 3e-58 UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria Rep... 227 3e-58 UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae ... 226 5e-58 UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin... 226 6e-58 UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cine... 226 6e-58 UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetob... 226 7e-58 UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID... 226 7e-58 UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n... 226 7e-58 UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protoch... 226 7e-58 UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium ... 225 1e-57 UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia Rep... 225 1e-57 UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetal... 225 1e-57 UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus... 225 2e-57 UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium R... 225 2e-57 UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobia... 225 2e-57 UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin... 224 2e-57 UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramese... 224 2e-57 UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacte... 224 3e-57 UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacteriu... 224 3e-57 UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylaci... 224 3e-57 UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae ... 223 4e-57 UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyc... 223 4e-57 UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacte... 223 4e-57 UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2... 223 4e-57 UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonel... 223 5e-57 UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Ta... 223 5e-57 UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular orga... 223 7e-57 UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis ... 223 7e-57 UniRef50_C1QB33 Site-specific recombinase XerD n=1 Tax=Brachyspi... 222 8e-57 UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum t... 222 8e-57 UniRef50_C0QXF7 Tyrosine recombinase XerD n=1 Tax=Brachyspira hy... 222 8e-57 UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes Rep... 222 8e-57 UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexu... 222 1e-56 UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula stale... 222 1e-56 UniRef50_Q72RY9 Tyrosine recombinase xerC n=6 Tax=Leptospira Rep... 222 1e-56 UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured mar... 222 1e-56 UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n... 222 1e-56 UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella fe... 222 1e-56 UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetal... 221 2e-56 UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteri... 221 2e-56 UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia g... 221 3e-56 UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostri... 221 3e-56 UniRef50_Q1RHT1 Tyrosine recombinase xerD n=18 Tax=Rickettsieae ... 221 3e-56 UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibriona... 220 3e-56 UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax... 220 4e-56 UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacteriu... 220 5e-56 UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA 220 6e-56 UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyc... 219 8e-56 UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacter... 219 8e-56 UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium... 219 1e-55 UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales ... 219 1e-55 UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collins... 218 1e-55 UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatu... 218 1e-55 UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacil... 218 1e-55 UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundu... 218 1e-55 UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=... 218 1e-55 UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis e... 218 1e-55 UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochr... 218 2e-55 UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobac... 218 2e-55 UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betapr... 218 2e-55 UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes ... 217 3e-55 UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga let... 217 3e-55 UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexiba... 217 4e-55 UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Coryneb... 217 4e-55 UniRef50_A2U2P8 Phage integrase family protein n=1 Tax=Polaribac... 216 4e-55 UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae... 216 5e-55 UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulos... 216 5e-55 UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas a... 216 6e-55 UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella kore... 216 6e-55 UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (c... 216 6e-55 UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candid... 216 7e-55 UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferro... 216 9e-55 UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium... 216 9e-55 UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacter... 215 1e-54 UniRef50_C8WGZ0 Integrase family protein n=4 Tax=Coriobacteriace... 215 1e-54 UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochlori... 215 1e-54 UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfo... 215 1e-54 UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepI... 214 2e-54 UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepI... 214 3e-54 UniRef50_A6G048 Site-specific recombinase, phage integrase famil... 214 3e-54 UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospir... 213 4e-54 UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Prote... 213 5e-54 UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atop... 213 6e-54 UniRef50_B0TP43 Integron integrase n=9 Tax=Bacteria RepID=B0TP43... 213 6e-54 UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collins... 213 7e-54 UniRef50_A6TQC7 Phage integrase family protein n=3 Tax=Clostridi... 212 9e-54 UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=... 212 9e-54 UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales R... 212 1e-53 UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella a... 212 1e-53 UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepI... 212 1e-53 UniRef50_C8PTU7 Integron integrase n=1 Tax=Treponema vincentii A... 211 2e-53 UniRef50_A6H1H3 Integrase/recombinase n=2 Tax=Bacteria RepID=A6H... 211 2e-53 UniRef50_Q0A7P4 Integron integrase n=318 Tax=root RepID=Q0A7P4_A... 211 2e-53 UniRef50_D1B6D4 Integrase family protein n=3 Tax=Synergistaceae ... 211 2e-53 UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Br... 211 2e-53 UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium ... 211 2e-53 UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olear... 211 2e-53 UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteria... 211 3e-53 UniRef50_A8UM85 Tyrosine type site-specific recombinase n=2 Tax=... 210 3e-53 UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofil... 210 3e-53 UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria... 210 3e-53 UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillu... 210 4e-53 Sequences not found previously or not previously below threshold: >UniRef50_Q0AZB8 Tyrosine recombinase XerD subunit n=2 Tax=Firmicutes RepID=Q0AZB8_SYNWW Length = 296 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 31/255 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 HS A + ++ S + L +D + + + +LP+ L EV L+ Sbjct: 68 HSSIARSLSSIKSYYKFLILEGELDK-NPSSDLETPKIKRKLPQVLSIEEVDKLMEQPNP 126 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + + +L ++ TG R++E L+L D + + Sbjct: 127 VVPLGIRDRAMLELMYGTGIRVSELLSLQVEDLNPTAGFLRCMGKG-------------- 172 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + R++P+ + + +Q +A+++ + + AR ++ + + Sbjct: 173 -----RKERIIPV-NQTSIDWVQRYLARVRNSLVKNPLERTLFLNARGRPLSRQGFFKIL 226 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 G V A VTPHT RHS+A H+L G L+ +Q ++GH IS+T++YT + Sbjct: 227 GNYVEKA-----ELEKEVTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLT 281 Query: 242 ALDVAARHRVQFAMP 256 + ++ Sbjct: 282 KSRLREVYQQYHPRS 296 >UniRef50_P46352 Tyrosine recombinase xerD n=98 Tax=Bacteria RepID=XERD_BACSU Length = 296 Score = 270 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 31/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 SA + ++ S Q D ++ + LPK L EV LL Sbjct: 69 KTSARHLASIRSFHQFLLREKVTDKDPSVH-IETQKTERALPKVLALNEVERLLDTPKLT 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 K +L L+ TG R++E + L D L+ + R Sbjct: 128 SPFGYRDKAMLELLYATGIRVSEMIELKTADVHLSMGFI-------------------RC 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R+VP+ ++ S ++ + + + + + N +++ + + Sbjct: 169 FGKGRKERIVPIGEAAA-SAIEEYMTKARGKLLKNNVSDALFLNHHGKQISRQGFWKNLK 227 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A +TPHT RHS+A H+L G L+ +Q ++GH IS+T++YT V Sbjct: 228 KIALEAG-----IKKELTPHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTK 282 Query: 243 LDVAARHRVQFAMP 256 + ++ Sbjct: 283 TRLKDVYKQFHPRA 296 >UniRef50_D0BKQ9 Tyrosine recombinase XerD n=2 Tax=Firmicutes RepID=D0BKQ9_9LACT Length = 297 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 32/257 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S ++ M+ + + ++ + ++ LPK L EV+ +L+ Sbjct: 67 SSTSRMISCLKKFFKFLQQEQLVE-TNPVQPLKVPKKSKMLPKALTVDEVTQVLNSCDTS 125 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L K +L L+ TG R++E + L D L + + Sbjct: 126 TVLGLRDKAMLELLYATGMRVSELITLKLSDLHLELGFL-------------------QT 166 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER-RNRRTGRTEKARIWEVTDRTVRTWI 181 R++P+ + +Q + ++ +E+ N R T + + Sbjct: 167 IGKGNKQRIIPIG-QAATNWVQHYLTYARVVLEQESNPVEYLFLNHRGNGFTRQGFWKNL 225 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + V A V+PHT RHS+A H+L AG L+++Q L+GH IS+T++YT + Sbjct: 226 KKIVQEAGV-----HKDVSPHTLRHSFATHILEAGADLRIVQELLGHSDISTTQIYTHLT 280 Query: 242 ALDVAARHRVQFAMPES 258 + ++ + Sbjct: 281 NERMKEIYQQAHPRAKK 297 >UniRef50_Q5HFS5 Tyrosine recombinase xerD n=101 Tax=Firmicutes RepID=XERD_STAAC Length = 295 Score = 269 bits (688), Expect = 9e-71, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 91/254 (35%), Gaps = 31/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + + S Q A + L +LP L EV ALL Sbjct: 68 KSIARFISTIRSFHQFAIREKYAAKDPTV-LLDSPKYDKKLPDVLNVDEVLALLETPDLN 126 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + +L L+ TG R++E + L + +L + V Sbjct: 127 KINGYRDRTMLELLYATGMRVSELIHLELENVNLIMGFVRVFGKGD-------------- 172 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VPL D+ + L T + ++ + ++ ++ + + I Sbjct: 173 -----KERIVPLGDAV-IEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKMIK 226 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A +TPHT RHS+A H+L G L+ +Q ++GH IS+T++YT V Sbjct: 227 QNGVKA-----NIKKTLTPHTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSK 281 Query: 243 LDVAARHRVQFAMP 256 + + Sbjct: 282 SQIRKMYNQFHPRA 295 >UniRef50_Q3Z771 Tyrosine recombinase XerD n=5 Tax=Dehalococcoides RepID=Q3Z771_DEHE1 Length = 302 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 88/254 (34%), Gaps = 32/254 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV---- 64 + A S + V LP + +V ALL+ Sbjct: 74 TVVRKMAAAKSFFNFMVAEGKL-KENPTENISTPKVGKPLPDAISISQVRALLNQPVKSG 132 Query: 65 --PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 K +L L+ +G R+ E + L D L + R Sbjct: 133 SSEAKRDKAMLELLYASGMRVTELVNLNVLDVDLKEGFV-------------------RC 173 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R++P+ +Q + +++ + R R +T + + + Sbjct: 174 FGKGRKERMIPIYPQAA-QSIQEYLTEIRPNLVRAETEKALFLNRRGDRLTRQGLWQILK 232 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A D V VTPHT RHS+A HML G L+ +Q L+GH +IS+T++YT + + Sbjct: 233 GYAREAGLDDV-----VTPHTLRHSFATHMLSGGADLRSVQELLGHANISTTQIYTHLTS 287 Query: 243 LDVAARHRVQFAMP 256 + + Sbjct: 288 EHIKRSYEKAHPRA 301 >UniRef50_B8I2V9 Tyrosine recombinase XerD n=5 Tax=Bacteria RepID=B8I2V9_CLOCE Length = 294 Score = 263 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 92/254 (36%), Gaps = 32/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + + ++ S Q ID + + V +LP+ L EV LL Sbjct: 68 STISRNLASIRSFYQFLYKDKVIDND-PTSELESPKVEKKLPQILSTQEVELLLDQPKCL 126 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + K +L L+ TG R++E ++L D + Sbjct: 127 DLKGIRDKAMLELLYATGIRVSELISLNLDDINFDLGLIKCN------------------ 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R +P+ S + + + + + + + ++ +T + I Sbjct: 169 --KGTRERTIPIG-SISTAAVHEYLEKSRNFLIQDSQEIALFVNVNGKRLTRQGFWKIIK 225 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A + +TPHT RHS+A H+L G L+ +Q ++GH ISST++Y ++ Sbjct: 226 HYKNQA-----KINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQIAK 280 Query: 243 LDVAARHRVQFAMP 256 + ++ Sbjct: 281 NKIKDVYKKTHPRA 294 >UniRef50_B7VJ63 Tyrosine recombinase xerD n=5 Tax=Vibrionales RepID=B7VJ63_VIBSL Length = 320 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 95/251 (37%), Gaps = 30/251 (11%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP----- 65 A M+ A+ Q AL + LPK L +V +LL Sbjct: 95 ARMLSAIRRLFQYLHREKVR-ADDPSALLISPKLPKRLPKDLSEEQVDSLLEAPDPNDPI 153 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 +L K +L L+ TG R+ E ++LT + SL V Sbjct: 154 ELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVIGKGG----------------- 196 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAV 185 RLVP+ ++ V ++T + Q + + N R ++T +T I Sbjct: 197 --KERLVPMGEN-AVDWIETFIEQGRPQLLGDNSSDVVFPSKRAKQMTRQTFWYRIKHYS 253 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A D +PH RH++A H+L G L+V+Q L+GH +S+T++YT V + Sbjct: 254 VIAGIDTELL----SPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERL 309 Query: 246 AARHRVQFAMP 256 H Sbjct: 310 KQIHAQHHPRA 320 >UniRef50_Q2LSM9 Integrase/recombinase n=6 Tax=Bacteria RepID=Q2LSM9_SYNAS Length = 296 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 91/252 (36%), Gaps = 31/252 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV---- 64 + A+ + I+ +A +++ V LP L E+ LL Sbjct: 70 SINRSLAALRGFYKFLLREKKIE-QNPVAEIELAKVWMRLPDTLSHEEMDQLLSQPGVRT 128 Query: 65 -PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + +L ++ TG R++E ++LT G + Y VQ Sbjct: 129 DSAIRDTAMLELMYATGLRVSELISLTTGSINWQVGYLVVQGKG---------------- 172 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R+VP+ ++ +++ R + +T + + + Sbjct: 173 ---NKERIVPIG-QVAYEHVRRYFDEVRPKCIRGAQTNVLFLNKSGQGMTRQGFWKLVRK 228 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A V PHTFRHS+A H+L G L+ +Q ++GH IS+T++YT V Sbjct: 229 YAVKAG-----LQKKVHPHTFRHSFASHLLEGGADLRSVQMMLGHADISTTQIYTHVTRE 283 Query: 244 DVAARHRVQFAM 255 + H+ Sbjct: 284 HLKDIHKKYHPR 295 >UniRef50_A3DD82 Tyrosine recombinase XerD subunit n=13 Tax=Firmicutes RepID=A3DD82_CLOTH Length = 296 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 32/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + + ++ S Q + I + V +LP+ L EV LL Sbjct: 70 STISRNLASIRSFYQYLTK-KGIISQDPTENLESPKVEKKLPQILSTKEVELLLEQPKCD 128 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 K +L L+ TG R++E ++L D +L Y Sbjct: 129 DLKGYRDKAMLELLYATGIRVSELISLDLDDVNLEMQYIRCN------------------ 170 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+ S V+ LQ + + + + +R +T + I Sbjct: 171 --KGARERIVPIG-SVSVNALQEYLTKSRNLLIQRPDEKALFVNVNGKRLTRQGFWKIIK 227 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A + +TPHT RHS+A H+L G L+ +Q ++GH ISST++Y ++ Sbjct: 228 QYKNQA-----KINKDITPHTLRHSFAAHLLENGADLRSIQEMLGHSDISSTQIYAQLAK 282 Query: 243 LDVAARHRVQFAMP 256 + ++ Sbjct: 283 NRIKEIYKKTHPRA 296 >UniRef50_A8YV25 Integrase/recombinase n=13 Tax=Lactobacillus RepID=A8YV25_LACH4 Length = 301 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 33/255 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + ++ ++ Q + I + + LP L E++ LL Sbjct: 72 SSISRLISSMRKFYQWLAR-QNIQKLNPMLEIDLPKKERRLPVALNQKEINDLLAQPDIK 130 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + +L TL+ TG R++E + L D V Sbjct: 131 RKLGLRDRAILETLYATGMRVSELINLELQDLHEDLGLVRVLGKGS-------------- 176 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR--NRRTGRTEKARIWEVTDRTVRTW 180 RL+P+S S + ++ +++ P+ + +R ++T + + Sbjct: 177 -----KERLIPIS-SVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLTRQAIWQM 230 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 I + +A + VTPHT RH++A H+L G L+V+Q ++GH IS+T++YT + Sbjct: 231 IKKYCQSAG-----ITKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNL 285 Query: 241 FALDVAARHRVQFAM 255 + ++ Sbjct: 286 SQKHILQVYQKTHPR 300 >UniRef50_Q1PZN1 Similar to site-specific tyrosine recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZN1_9BACT Length = 298 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 98/253 (38%), Gaps = 37/253 (14%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 A + ++ S + ++Y + + +LP ++ + LL+ Sbjct: 78 TVARKLASIRSLYKFLCQHGILEY-NPVEQIKTPKTDKKLPGFMSVNDTEILLNQPDTCN 136 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L K ++ TL++TG R++E + + D V+ Sbjct: 137 LSGLRDKAIMETLYSTGMRVSELVGINIADIDFHSGIVKVRGKGS--------------- 181 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R++P+ + ++ +Q + + K +T+R+V I + Sbjct: 182 ----KERILPVG-NHALNAIQLYLEKRKAD------NEALFLNKFHGRLTERSVARMIEK 230 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 + AA + V+PHTFRHS+A H+L G L+ +Q +GH S+S+T++YT V Sbjct: 231 YMKKAA-----MHLRVSPHTFRHSFATHLLDNGADLRAVQEFLGHSSLSTTQIYTHVTTE 285 Query: 244 DVAARHRVQFAMP 256 + + Sbjct: 286 RLKQVYDKTHPRA 298 >UniRef50_Q93C64 Tyrosine recombinase xerD n=50 Tax=Bacilli RepID=XERD_LACCA Length = 293 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 88/253 (34%), Gaps = 31/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + + M+ A+ + AI + LP L E+ AL+ Sbjct: 66 ASVSRMISALRKFYRFLLREGAI-KSDPMTKIDTPKKAQHLPATLSGTEIDALMAKPDTT 124 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + + ++ TG R++E + L LA V Sbjct: 125 KPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAMNLLQVTGKGD-------------- 170 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP+S + + + + + + + +T + + + Sbjct: 171 -----KERLVPISPQAA-DWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQVIWKNLK 224 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A V VTPHT RHS+A +L G L+V+Q L+GH IS+T++YT + Sbjct: 225 -----AYIASVGIEKDVTPHTLRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSN 279 Query: 243 LDVAARHRVQFAM 255 + A + Sbjct: 280 QHLVAVYHKTHPR 292 >UniRef50_Q7MNQ0 Tyrosine recombinase xerD n=287 Tax=Proteobacteria RepID=XERD_VIBVY Length = 305 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 30/251 (11%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP----- 65 A M+ A+ Q AL + LPK + +V ALL Sbjct: 80 ARMLSAIRRLFQYLHREKVR-ADDPSALLVSPKLPQRLPKDISEEQVDALLDAPDPNDPV 138 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 +L K +L L+ TG R+ E ++LT + SL V Sbjct: 139 ELRDKAMLELLYATGLRVTELVSLTMENISLRQGVVRVTGKGG----------------- 181 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAV 185 RLVP+ ++ + ++T + Q + + R ++T +T I Sbjct: 182 --KERLVPMGEN-AIDWIETFIKQGRPALLGETSSDVVFPSKRARQMTRQTFWHRIKFYA 238 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A D + ++PH RH++A H+L G L+V+Q L+GH +S+T++YT V + Sbjct: 239 VIAGID----TDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERL 294 Query: 246 AARHRVQFAMP 256 H Sbjct: 295 KQIHSQHHPRA 305 >UniRef50_B8HGE6 Tyrosine recombinase XerD n=37 Tax=Actinobacteridae RepID=B8HGE6_ARTCA Length = 362 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 25/255 (9%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV--- 64 +A V AV + +L + M LPK + EV+ +L Sbjct: 125 RSAARTVVAVRGLHKFWALEGHT-ASDPASEVHPPMAGKRLPKAITVDEVTRILEAAGTD 183 Query: 65 --PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + LL L++TGARI+EA+ L D SLA + R+ Sbjct: 184 TATGLRDRALLEFLYSTGARISEAVGLDVDDISLA------------GDDTEQGPAIVRL 231 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR-TGRTEKARIWEVTDRTVRTWI 181 RLVPL S+ L+ + + + + + + AR ++ ++ T + Sbjct: 232 FGKGSKERLVPLG-SYGARALEAYLVRGRPLLAAKGKGTPALFLNARGGRISRQSAWTIL 290 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A A + V+PHT RHS+A H+L G ++V+Q L+GH S+++T+VYT V Sbjct: 291 KVAAEKA-----NITRDVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQVYTLVT 345 Query: 242 ALDVAARHRVQFAMP 256 A + + Sbjct: 346 ADTLREVYAAAHPRA 360 >UniRef50_A8RBU2 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBU2_9FIRM Length = 302 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 32/257 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 ++ A + ++ S + + I + + +P++L E+ L Sbjct: 73 NTTIARKLSSLRSFYHYLNEYIGIAN-NPFVYFKTPKIAKRIPEFLFYDEIEIFLESFDL 131 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + + ++ G R++EA++L D A + Sbjct: 132 NSMQGLRDRTMFELMYACGLRVSEAVSLRTRDVDFADNILHIHGKGD------------- 178 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 RLVP D L + + ++ + T R ++T R V+ + Sbjct: 179 ------KERLVPFYD-LAKELLVSYIKDVRDVWA-TSDETALFVNQRGKKLTTRGVQYLM 230 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 +AV V V PH FRHS+A H+L G L+ +Q L+GH S+S+T++Y V Sbjct: 231 NKAVEK-----CDLHVHVHPHMFRHSFATHLLDNGADLRYVQELLGHSSLSTTQIYVHVS 285 Query: 242 ALDVAARHRVQFAMPES 258 + A + + Sbjct: 286 KERLKAAYEHAHPRAKE 302 >UniRef50_A9NG15 Site-specific tyrosine recombinase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NG15_ACHLI Length = 301 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 98/259 (37%), Gaps = 31/259 (11%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + + ++ S + + +D + LP L EV ++L + Sbjct: 69 KTISRKLTSIKSFHKFLLMEKEVDEDVT-HKIARPKIEKTLPTVLSVDEVISILEVIDKS 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L LL ++ +G R++E L + D + Y V Sbjct: 128 TTLGLRNMALLELIYGSGLRVSELLNIKLKDIHMQQSYVIVTGKGS-------------- 173 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+SD + ++ + + + + + + + ++ + Sbjct: 174 -----KERMVPISDMAII-AIRNYLVKARDDLIK-EKTDYLFINNQGKTLSRVGFFKVLK 226 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + A D V+PHT RHS+A H+L G+ L+ LQ+L+GH+ IS+T++YT + Sbjct: 227 KLASEANLD----PEKVSPHTLRHSFATHLLENGMDLRSLQNLLGHEDISTTQIYTHISQ 282 Query: 243 LDVAARHRVQFAMPESDAV 261 + + + + Sbjct: 283 SRLKQVYNKTHPRAKENNK 301 >UniRef50_Q03FK2 Tyrosine recombinase xerC n=72 Tax=Bacilli RepID=XERC_PEDPA Length = 301 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 34/260 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + + + V A+ S + +D L Q+ D+LP + E++ L V Sbjct: 65 LARTSISRKVSALRSFYRFLVKNDLVDK-NPFELVQLKKQSDKLPHFFYEKEMNMLFEAV 123 Query: 65 ------PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 L +L L+ TG R++E AL D + V Sbjct: 124 YQAEGAQKLRNIAILEVLYGTGMRVSECAALQWSDIDFSMQTILV--------------- 168 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME--RRNRRTGRTEKARIWEVTDRT 176 R VP + LQ P + +T Sbjct: 169 ----LGKGNKERYVPFGR-YAKEALQNYRKNEWEPFLSKYKQTHNFVFINHYAKPITTTG 223 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 + + + + A++ +G + PH RHS+A +L G L+ +Q L+GH S+S+T++ Sbjct: 224 IEYILNQVITASSLNG-----KIHPHMLRHSFATALLNNGADLRTVQELLGHSSLSTTQI 278 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT V + +R F Sbjct: 279 YTHVTKEKLQESYRKYFPRS 298 >UniRef50_B5YFC5 Recombinase n=2 Tax=Dictyoglomus RepID=B5YFC5_DICT6 Length = 301 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 34/255 (13%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 +S V ++ S + I+ + +LP++L EV LL+ Sbjct: 68 NSTFVRKVISLRSFFEYLLTFEKINEDLTV-FIPTPKAEKKLPQFLSVDEVMKLLNSPSL 126 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + + ++ TL+ TG R++E + + D + V Sbjct: 127 DDLIGIRDRAIIETLYATGIRVSELVGMNEEDINWNYGEIRV------------------ 168 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + R+V + + LQ ++ + ++ A+ ++DR +R I Sbjct: 169 -FGKRAKERIVIVGEETL-KILQLYKDHVRPKLLKK-PEKAFFLNAKGGRISDRAIRMII 225 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + F+ V+PHT RH++A H+L G L+ +Q L+GH IS+T++YT + Sbjct: 226 KKYTK-------DFNKKVSPHTLRHTFATHLLEGGADLRYVQELLGHVRISTTQIYTHLT 278 Query: 242 ALDVAARHRVQFAMP 256 + + + + Sbjct: 279 SEQIRKTYTLSHPRA 293 >UniRef50_Q71Y59 Tyrosine recombinase xerD n=19 Tax=Firmicutes RepID=XERD_LISMF Length = 297 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 90/255 (35%), Gaps = 32/255 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---- 63 A + ++ S + + + + LPK L +V LL Sbjct: 69 RSVARYIASLRSFFHYLMHDGKMSHD-PMIQIETPKQAQGLPKVLNLDDVEKLLSSSDTS 127 Query: 64 -VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + ++ L+ TG R+ E ++L D L + + Sbjct: 128 TPLGLRDQAMMEILYATGLRVTELVSLKMDDLHLHMGFI-------------------QT 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN-RRTGRTEKARIWEVTDRTVRTWI 181 R++PL + L+ + + + + R R +T + + Sbjct: 169 IGKGDKERIIPLG-KTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGLTRQGFWKIL 227 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + P+TPHT RHS+A H+L G L+ +Q L+GH IS+T++YT V Sbjct: 228 KGIAKESG-----IEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVT 282 Query: 242 ALDVAARHRVQFAMP 256 L + ++ Sbjct: 283 KLRLKDVYKQFHPRA 297 >UniRef50_B5YF74 Tyrosine recombinase XerD n=2 Tax=Dictyoglomus RepID=B5YF74_DICT6 Length = 296 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 100/259 (38%), Gaps = 33/259 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + ++ S + I+ + + + + LP+ L E+ + L Sbjct: 66 KSIARKISSIRSFIKFLLREGYINKNYSNFML-IPKIPMYLPEVLDPKEIESFLKIPDPL 124 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + +L T + TG R++E + L + L Y R Sbjct: 125 SPLGIRNMAILETFYATGIRVSELVNLNIQNVDLEEKYV-------------------RC 165 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R+VPL D + V L+ ++ + + + +T + V I Sbjct: 166 FGKGEKERIVPLGD-YAVESLKRYLSVR--HLFNPKDKEALFLNKKGERITRQGVWFIIK 222 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A + + V+PHTFRHS+A H+L G ++++Q L+GH I++T++YT + + Sbjct: 223 -----AYSKILGLPKKVSPHTFRHSFATHLLSNGADIRIVQELLGHSDIATTQIYTHIVS 277 Query: 243 LDVAARHRVQFAMPESDAV 261 + ++ + + Sbjct: 278 SKLHEVYQRAHPLMRRNTK 296 >UniRef50_A1HN49 Tyrosine recombinase XerC n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN49_9FIRM Length = 302 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 33/257 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 + A + A+ S + +D L + +LP +L EV+ LL Sbjct: 72 RTTIARRIAALRSFYRFLCREGLVD-TNPFKLVHTPKIEKKLPVFLDEREVAELLELPAD 130 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 +L L+ TG R+ E L D L + V Sbjct: 131 DVLGRRDAAILELLYATGIRVAELTGLKTSDVDLVSRFVIVCGKG--------------- 175 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME---RRNRRTGRTEKARIWEVTDRTVRT 179 R+VP+ + L+ +A + + R+ + ++ +TDR+VR Sbjct: 176 ----AKERIVPIGR-TAAAALERYLADARPRLYSKWRKEQHQFLFINSKGGPLTDRSVRR 230 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 I + +A A V+PHT RH++A HML G L+ +Q ++GH ++S+T++YT Sbjct: 231 IIDKYIANLAVA-----KKVSPHTIRHTFATHMLNNGADLRSVQEMLGHVNLSTTQLYTH 285 Query: 240 VFALDVAARHRVQFAMP 256 V + A +R Sbjct: 286 VTKERLKAVYRETHPRA 302 >UniRef50_P18021 Resolvase n=83 Tax=root RepID=REDM_ECOLX Length = 260 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 237/255 (92%), Positives = 242/255 (94%), Gaps = 1/255 (0%) Query: 13 MVPA-VYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKM 71 +PA ++ A LPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL RKM Sbjct: 3 HLPAPIHHARDAVQLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKM 62 Query: 72 LLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 131 LLATLWNTGARINEALALTRGDFSL PPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL Sbjct: 63 LLATLWNTGARINEALALTRGDFSLTPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRL 122 Query: 132 VPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 191 VPLSDSWYVSQLQTMVA LKIPMERRN+RTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD Sbjct: 123 VPLSDSWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAAAD 182 Query: 192 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 251 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV Sbjct: 183 GVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRV 242 Query: 252 QFAMPESDAVAMLKQ 266 QF+MPESDAV MLK Sbjct: 243 QFSMPESDAVTMLKN 257 >UniRef50_D2BHG9 Site-specific recombinase n=5 Tax=Dehalococcoides RepID=D2BHG9_DEHSV Length = 307 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 94/264 (35%), Gaps = 31/264 (11%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 ++ ++ A + AV S + I L + LP++L EVS L Sbjct: 61 IAKGIVKGSIARKLSAVRSFYRYLMREGLIQKNPTLNA-SSPRLDKRLPEFLTTAEVSKL 119 Query: 61 L-----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 L L K + L+ +G R++E + L + L V Sbjct: 120 LRMPDSSTPQGLRDKAFMELLYASGLRVSELVKLDIENLDLHSHQIRVWGKGS------- 172 Query: 116 ARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDR 175 R+V + + +QT + + ++ + ++ R Sbjct: 173 ------------KERIVLMGLP-AIQSIQTYLNLGRPLLKGKRNTPALFLNPNGGRLSAR 219 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 + + + + A V PH RH++A H+L G L+V+Q L+GH ++S+T+ Sbjct: 220 SFQERLDKLAHQAG-----IEKHVHPHMLRHTFATHLLDGGADLRVVQELLGHSNLSTTQ 274 Query: 236 VYTKVFALDVAARHRVQFAMPESD 259 +YT V + + + Sbjct: 275 IYTHVTKSQARKVYMSSHPLAKPQ 298 >UniRef50_C0VHG1 Site-specific tyrosine recombinase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VHG1_9GAMM Length = 306 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 90/253 (35%), Gaps = 32/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + A+ + + +A + LPK L +V AL++ Sbjct: 80 RSIARCLSALRQFYKFLR-EQKLREDNPVASHHSPKIGRALPKDLSEQDVEALINAPDIS 138 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + + L+ G R++E L L +L + + Sbjct: 139 TTLGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGFVRITGKG--------------- 183 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVPL + ++ +A+ + + + N ++ + I Sbjct: 184 ----NKERLVPLG-QYACDWIEKYLAESRPQLYKSNT-DYLFLTQHGGIMSRQNFWYAIK 237 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A ++PHT RH++A H+L G L+V+Q L+GH +S+T++YT V Sbjct: 238 RYALQA-----NIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQ 292 Query: 243 LDVAARHRVQFAM 255 + A H Sbjct: 293 HRMQALHHQYHPR 305 >UniRef50_Q04F60 Tyrosine recombinase XerD subunit n=9 Tax=Lactobacillales RepID=Q04F60_OENOB Length = 302 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 93/259 (35%), Gaps = 36/259 (13%) Query: 3 GSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH 62 S++H MV ++ S I + + LP+ L A E+ A+L Sbjct: 74 NSIVH-----MVSSLRKFFAYLSDDQQIQID-PMLKVTTPKKNSHLPQVLTATEIEAVLA 127 Query: 63 YVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 L + LL T++ TG R++E L D Sbjct: 128 VPDISTTLGLRNRALLETMYATGFRVSEICNLKLADLHDELGLIT--------------- 172 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 Q R+VP+ + + + + + + + ++ + + Sbjct: 173 ----TIGKGQKQRIVPIGEMSLL-YISKYFKESRPILLKDKESPYLFLNDHGHRISRQGI 227 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + E A D ++PHT RHS+A ++L G L+++Q L+GH IS+T++Y Sbjct: 228 FKLVKEIAIKAGID-----KDISPHTLRHSFATNLLENGADLRIVQELLGHSDISTTQIY 282 Query: 238 TKVFALDVAARHRVQFAMP 256 T V + ++ Sbjct: 283 THVSQKHIREQYNRFHPRA 301 >UniRef50_Q72SA5 Tyrosine recombinase xerD n=6 Tax=Leptospira RepID=XERD_LEPIC Length = 298 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 31/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A V A+ + +D + V +P YL E+ L + + Sbjct: 71 KTIAREVVAIRQFYKFLKDEKKLD-TNPTEKIETPEVMRSIPDYLTQDEIEELFASIKED 129 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L K + L+++G RI+EA L D L V+ +Q Sbjct: 130 NLYELRDKCIFELLYSSGLRISEACNLRLNDMDLEGMTLTVEGKGGRQ------------ 177 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP + L + Q + + + + + ++V + Sbjct: 178 -------RLVPFGEKSL-DILNRYLKQSRPFILKSRNCEYLFVSKKGSYINRKSVWRLLN 229 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + VTPHT RHS+A H+L LK +Q L+GH I++T++YT + Sbjct: 230 HYIKR-----TSILKKVTPHTLRHSFATHLLENHADLKSVQELLGHIDIATTQIYTHMAN 284 Query: 243 LDVAARHRVQFAM 255 + H+ Sbjct: 285 KTLREVHKKFHPR 297 >UniRef50_UPI0001698363 tyrosine recombinase XerD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698363 Length = 227 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 93/241 (38%), Gaps = 31/241 (12%) Query: 12 VMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----D 66 + + + I + + + LP+ + + E+ L+ V Sbjct: 5 RHIITIRGFYKFLIKEKLISFD-PVKNIDIPKTGLSLPEVISSKEMELLIDSVDTKNPRG 63 Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L +L TL+ G R++E +++ + +L + + Sbjct: 64 LRNAAMLETLYGAGLRVSELVSMKMENINLEASFIRIFGKGS------------------ 105 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVA 186 R+VP+ S+ + +++ + + + + +T + + + Sbjct: 106 -KERIVPIG-SFAIEKVRNWIMHGRPIILKNIPSHYLFVARAGKPMTRQGFWKLLKKYSR 163 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 A+ S +TPHTFRHS+A H+L G L+ +Q+++GH IS+T++YT V + Sbjct: 164 ASG-----ISKKITPHTFRHSFATHLLEGGADLRSVQTMLGHSDISTTQIYTHVSRDYLR 218 Query: 247 A 247 Sbjct: 219 K 219 >UniRef50_C8NEN7 Integrase/recombinase XerC n=2 Tax=Granulicatella RepID=C8NEN7_9LACT Length = 318 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 98/260 (37%), Gaps = 33/260 (12%) Query: 6 IHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP 65 S + + ++ S A++ A LP++ E+ ++ + Sbjct: 67 NRSSISRFLSSLRSFYHFLVERKAVE-SNPFASVSYKKGKMLLPEFFYEDEIEKFINSID 125 Query: 66 D-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 K L+ L+ TG R++E LT L V Sbjct: 126 GNQSLDQRNKALVEVLYATGMRVSELTNLTLEQLDLDNSIILVIGKGS------------ 173 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT--GRTEKARIWEVTDRTVR 178 R VP+ D + + L+T + + + + + R+ +T VR Sbjct: 174 -------KERYVPIGD-FARTALETYLEEGRKDLMAKERKEHFFVFVNHLGDPLTTNGVR 225 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + + + + ++ + PH RH++A H+L G ++ +Q L+GH S+SST++YT Sbjct: 226 YILEKLIQESG-----LTLKIHPHMLRHTFATHLLNNGADMRTVQELLGHVSLSSTQIYT 280 Query: 239 KVFALDVAARHRVQFAMPES 258 V + +++ F ++ Sbjct: 281 HVTKEALQQNYQLYFPRSKA 300 >UniRef50_Q3AB72 Tyrosine recombinase XerC n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB72_CARHZ Length = 297 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 33/258 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH---- 62 +A + A+ S + ++ + LP+ L EV ++ Sbjct: 64 RRTAARKMVALRSFYRFLKR-CGFIKENPALSLEIPKIPKTLPEVLTVDEVFKVIEGQEN 122 Query: 63 -YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + LL + G RI E LT D L Y V Sbjct: 123 STPTGLRNRALLELFYGAGLRIGEIAGLTLNDLDLTQGYVRVTGKG-------------- 168 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + R+VPL + + L+ + + + + + +T R +R I Sbjct: 169 -----RRQRIVPLG-KYALDSLKLYLEAGRP--AFKPKSEKLFLNQQGAGLTVRGIRYLI 220 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + V A + +TPHTFRHSYA H+L G ++ +Q L+GHK +S+TE+YT + Sbjct: 221 SQIVKKAG-----LNRKITPHTFRHSYATHLLEGGADIRAVQELLGHKRLSTTEIYTHLS 275 Query: 242 ALDVAARHRVQFAMPESD 259 + + + Sbjct: 276 KERLREVYLRTHPRSREE 293 >UniRef50_B5YGX8 Tyrosine recombinase XerD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGX8_THEYD Length = 294 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 94/252 (37%), Gaps = 32/252 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 A ++ ++ + +I + + LPK L EV LL + + Sbjct: 70 SIARILSSLKQFFRFMIF-DSIINHDPTEGLKSPKLWLRLPKALEIDEVKRLLSVMLESK 128 Query: 67 --LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPA 124 L +L ++ +G R++E + L D + + V+ Sbjct: 129 YYLRDIAMLELMYASGLRVSELVRLKLSDINFEAGFIRVKGKGD---------------- 172 Query: 125 GQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 R+VP++ + +++ + +L+ + ++ R +T + I Sbjct: 173 ---KERVVPIA-QRSIDKIKNYLVKLRPVLLKKKASEYVFLNNRGQPMTRQRFWQNIKAI 228 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 A VTPH RHS+A H+L G L+ LQ ++GH IS+T++YTKV Sbjct: 229 GRIAGV-------NVTPHMIRHSFATHLLEGGADLRSLQKMLGHSDISTTQIYTKVSMDR 281 Query: 245 VAARHRVQFAMP 256 + + Sbjct: 282 LRKEYLKHHPRA 293 >UniRef50_UPI0001C4241D integrase/recombinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4241D Length = 321 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 93/257 (36%), Gaps = 33/257 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 + A + ++ S + A + +LP +L E+ L Sbjct: 91 RNSVARKISSMRSLFHFLMREEELTR-NVFAETHLPKQASKLPSFLYEEEMDELFKAFEG 149 Query: 67 -----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + +L L+ TG R+ E L D L FV+ Sbjct: 150 NTPLDKRDRAILELLYATGMRVGECSQLDVADIDLRIGTAFVKGKG-------------- 195 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG--RTEKARIWEVTDRTVRT 179 R VP+ S+ L + ++ + ++ R +TDR++R Sbjct: 196 -----NKERYVPIG-SFACDALHEYIEDARVNLLKKGNSETKRLFLNYRGGPLTDRSIRR 249 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + V A + + PH RHS+A H+L G L+V+Q L+GH+ +S+T+VYT Sbjct: 250 MLAKRVEEA-----SMQKHIRPHDLRHSFATHLLNNGADLRVVQELLGHEHLSTTQVYTH 304 Query: 240 VFALDVAARHRVQFAMP 256 V + ++ Sbjct: 305 VTKDRLREVYKNHHPRA 321 >UniRef50_B5YFZ8 Tyrosine recombinase xerC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=XERC_THEYD Length = 301 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 92/259 (35%), Gaps = 34/259 (13%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 A + + S + + LPK+L + L+ + Sbjct: 68 TVARKLSTLRSFFSYLY-SEGFIKINPARVVSSVKIKRALPKFLTVDDAFKLVEAPSEDK 126 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 K +L +++G R++E L D L V+ Sbjct: 127 FTVQRDKAILELFYSSGIRVSELCGLNLEDLDLKEGLIKVRGKG---------------- 170 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQL---KIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 + R+VP+ L+ +A +I + T R ++DR VR Sbjct: 171 ---KKERIVPVGQK-AKEALKKYLAIRQILRIKKKLSLDETPLFINNRGQRISDRQVRRI 226 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + + + PHT RH++A H+L G L+V+Q L+GH S+S+T++YT V Sbjct: 227 VEKYAK-----FIGVLEKIGPHTLRHTFASHLLMEGADLRVIQELLGHASLSTTQIYTHV 281 Query: 241 FALDVAARHRVQFAMPESD 259 + + + + D Sbjct: 282 DLKHLIEVYDKSHPLSKED 300 >UniRef50_C0QM80 Tyrosine recombinase XerD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM80_DESAH Length = 295 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 93/253 (36%), Gaps = 31/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + AV + +L + L L + LP++L +V+ALL Sbjct: 68 RSRARHLIAVRGFYRFLAL-ENLTRSNPLRLIDIPKAGTRLPRFLSQDQVTALLEMPDRT 126 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L +L L+ G R++E + L L + R+ Sbjct: 127 THRGLRNAAMLEILYGAGLRVSELVGLKTEQVDLVACFV-------------------RL 167 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP S + + + M ++N +T + + Sbjct: 168 FGKGSRERIVPFG-SHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQGFWKLLK 226 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A S+ V+PHT RHS+A H+L G L+ +Q+++GH I+ST++YT V Sbjct: 227 KYALGAG-----ISIKVSPHTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHVSR 281 Query: 243 LDVAARHRVQFAM 255 + H+ Sbjct: 282 QYLVDMHKKYHPR 294 >UniRef50_Q67PC5 Recombinase n=2 Tax=Firmicutes RepID=Q67PC5_SYMTH Length = 356 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 22/260 (8%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 A + + S + + +A + LP +L E+ LL Sbjct: 110 RRTIARKLSCLRSFYKYLVRADLV-PTNPVAGVHTPKLERRLPVFLDEEEIGGLLSQPDT 168 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + LL L+ TG R+ E +AL RGD + + V K+R A + Sbjct: 169 HTPLGLRDRALLELLYATGLRVGELVALNRGDIDYSEGWVIVWGKGRKERAVPVGSEALQ 228 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 P+ + + Q++ + ++DR+VR + Sbjct: 229 ALGHYLRDGW-PVLRARAPAAEQSL----------PEAKQPLFLNKLGGRLSDRSVRRLL 277 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 V+ A S ++PH RH++A HML G L+ +Q ++GH S+S+T++YT V Sbjct: 278 DRYVSQLA-----LSRQISPHKIRHTFATHMLNHGADLRAVQEMLGHASLSTTQIYTHVT 332 Query: 242 ALDVAARHRVQFAMPESDAV 261 + + A Sbjct: 333 TQRLRTEYLRAHPRQRRAAP 352 >UniRef50_D2NUA7 Site-specific recombinase XerD n=3 Tax=Actinomycetales RepID=D2NUA7_9MICC Length = 437 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 100/260 (38%), Gaps = 23/260 (8%) Query: 9 QSAVMVPAVYSAGQP--ASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL----- 61 A + AV A ++L V D A LPK + ++ LL Sbjct: 193 SIARTMAAVRGAHAFWVSALIVPTDPAAP---VTPPKNVKRLPKAVSVEDIQRLLAVPDR 249 Query: 62 HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + +L L+ TGAR++E L D T + + R Sbjct: 250 ETATGLRNRAILEFLYATGARVSEMLNADIDDVHFEGTL------TDEDGNQITLPGYVR 303 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG-RTEKARIWEVTDRTVRTW 180 + RLVP+ S+ +Q + + + + + T R + + Sbjct: 304 LFGKGNKERLVPIG-SYAQKAIQDYLVRARPSLVAHGKGTAALFVNGRGGRLGRQGAWLI 362 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + EA AA S +PH+ RHS+A H+L G ++V+Q L+GH SI++T+VYTKV Sbjct: 363 LKEAAEAAG-----LSSDFSPHSMRHSFATHLLQGGADIRVVQELLGHASIATTQVYTKV 417 Query: 241 FALDVAARHRVQFAMPESDA 260 + +R+ Sbjct: 418 TPEGLMEVYRMAHPRAHERG 437 >UniRef50_C1A8W1 Tyrosine recombinase XerD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8W1_GEMAT Length = 312 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 91/254 (35%), Gaps = 31/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + A+ + + + + LP+ L EV+ LL Sbjct: 85 SSIRRNISALRTWFRIM-VAEGLVTTDPTERLDSPQRWRTLPEVLSVDEVTRLLAAPGLD 143 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + +L + G R++E + ++ D L V Sbjct: 144 ERLAFRDRAMLELAYGAGLRVSEWIGMSVKDVMLEDSLVRV------------------- 184 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP+ S + + + +L+ +ER + R ++ + Sbjct: 185 LGKGNKERLVPIGRS-AIGAVAVYLRELRPVLERGGGKGILFLNGRGAPLSRMGAWKLVR 243 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + V A PV+PHT RHS+A H+L G L+ +Q ++GH I++T++YT V Sbjct: 244 KYVGMAG-----IEKPVSPHTLRHSFATHLLEGGADLRAVQEMLGHADIATTQIYTHVDR 298 Query: 243 LDVAARHRVQFAMP 256 + + HR Sbjct: 299 EYLRSVHRQFHPRA 312 >UniRef50_A5WBQ8 Tyrosine recombinase XerD n=6 Tax=Moraxellaceae RepID=A5WBQ8_PSYWF Length = 312 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 87/256 (33%), Gaps = 34/256 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A M+ ++ + + + LPK L +V +LL Sbjct: 82 RTQARMLSSLRQFYLWMVGNERRE-DNPCERIKTPKIGRSLPKDLSENDVESLLSAPDTS 140 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L K +L L+ G R++E + L+ +L + + Sbjct: 141 TALGLRDKAMLEVLYACGLRVSELMNLSLEQVNLNAGWLQITGKG--------------- 185 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM---ERRNRRTGRTEKARIWEVTDRTVRT 179 RLVPL + + L + + + + + +T + Sbjct: 186 ----NKTRLVPLGE-YASDALDDYLTHARGELVAHLKSGNCQAVFLTTQGGYMTRQNFWY 240 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 I + A ++PHT RH++A H+L G L+ +Q L+GH +S+T++YT Sbjct: 241 MIKKYAKQAG-----IQSDLSPHTLRHAFATHLLNHGADLRSVQLLLGHSDLSTTQIYTH 295 Query: 240 VFALDVAARHRVQFAM 255 V + H Sbjct: 296 VATARLQQLHEAHHPR 311 >UniRef50_A3M1C2 Site-specific tyrosine recombinase n=15 Tax=Moraxellaceae RepID=A3M1C2_ACIBT Length = 306 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 88/253 (34%), Gaps = 32/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + A+ + + +A + LPK L +V AL+ Sbjct: 80 RSIARCLSALRQFYKFLR-EQKLRSDNPVATHHSPKIGRALPKDLSEEDVEALIQAPDIT 138 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + + L+ G R++E L L +L Y + Sbjct: 139 TALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRITGKG--------------- 183 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVPL + ++ + + + + ++ ++ + I Sbjct: 184 ----NKERLVPLG-QYACDWVERYLNEARPQL-YKSSTDYLFLTQHGGIMSRQNFWYAIK 237 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A ++PHT RH++A H+L G L+V+Q L+GH +S+T++YT V Sbjct: 238 HYALQA-----NIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQ 292 Query: 243 LDVAARHRVQFAM 255 + + H Sbjct: 293 VRMQQLHEKHHPR 305 >UniRef50_C3RL48 Tyrosine recombinase xerC n=4 Tax=Bacteria RepID=C3RL48_9MOLU Length = 304 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 91/258 (35%), Gaps = 37/258 (14%) Query: 4 SVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY 63 ++ H + A+ S L + L + V P +L E+ LL Sbjct: 75 TINHK-----LSALRSFFNYL-LKEELINDNPFLLIESQKVAKRNPDFLFPEEILGLLDS 128 Query: 64 VP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 + + K ++ ++ +G R +E + L + F+ Sbjct: 129 IETKDDLGIRNKAMMELMYASGLRCSEVVNLQLSNIDFNQMVLFIHGKG----------- 177 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-RTGRTEKARIWEVTDRTV 177 R VP D + L + + + + +N +T+R V Sbjct: 178 --------NKDRYVPFHD-YAGEWLIKYIQEARENLMIKNEGHNFVFVNKFGNPLTNRGV 228 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + + + + PHT RHS+A H+L AG ++ +Q L+GH+++S+T++Y Sbjct: 229 ENIVDRIMR-----LYDSTKKIHPHTIRHSFATHLLNAGADIRTVQELLGHENLSTTQIY 283 Query: 238 TKVFALDVAARHRVQFAM 255 T + + + Sbjct: 284 THISRDHLKEVYLKAHPR 301 >UniRef50_Q1Q4J1 Similar to site-specific recombinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J1_9BACT Length = 295 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 87/253 (34%), Gaps = 31/253 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 + ++ + L + L + +LP + ++ LL Sbjct: 69 SINRAIVSIRMFYKFLILEGKLQK-NPLVSLDSPKLWKKLPYVVPIHKIEDLLSAADVKT 127 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + K +L L+ TGAR++E ++ +L Y + Sbjct: 128 KLGIRNKAILELLYATGARVSEVATISLNGINLEYGYIKCKGKGS--------------- 172 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R+VPL + +Q + ++ ++ + + + Sbjct: 173 ----KERIVPLGKKASI-AIQEYLTTVRPQIKDSQNSHYLFLSRTGRPLRRENIWLIVKN 227 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A ++PH RHS+A H+L G L+ +Q ++GH SIS+T++YT V Sbjct: 228 CALKAGITEA-----ISPHKLRHSFATHLLENGADLRAVQEMLGHVSISTTQIYTHVNKQ 282 Query: 244 DVAARHRVQFAMP 256 + A H+ Sbjct: 283 HLKAIHQKFHPRA 295 >UniRef50_Q8KET0 Tyrosine recombinase xerD n=12 Tax=Chlorobiaceae RepID=XERD_CHLTE Length = 304 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 34/256 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S A + A+ S + L + + LP L E++ LL Sbjct: 74 SSIARNISAIRSFHKFL-LTERLATMNPAENIHQPKLARYLPSVLTIEEMATLLDAPLKR 132 Query: 67 -------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L K +L L+ TG R++E L L+R + + + V Sbjct: 133 HPTSTFMLRDKAMLEFLYATGVRVSELLGLSRLNLHMDDGFVRVFGKGS----------- 181 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 RLVP+ +S ++ + +L+ M +R ++ Sbjct: 182 --------KERLVPVG-QTAISWMKRYLDELRPGMMSATSHDTIFLNSRGGPLSRMAAWN 232 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + E A P++PHTFRHS+A H+L G L+V+Q ++GH SI +T++YT Sbjct: 233 IVREHAVIAG-----IEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIYTH 287 Query: 240 VFALDVAARHRVQFAM 255 + + H+ Sbjct: 288 IDRSFIKEVHKTFHPR 303 >UniRef50_C7N4T8 Tyrosine recombinase XerD n=7 Tax=Coriobacteriaceae RepID=C7N4T8_SLAHD Length = 309 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 91/259 (35%), Gaps = 33/259 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV--- 64 S + A+ + + + L + V D LP L EV+ LL Sbjct: 78 SSIERHLSALKGFHRFL-VGEGVTKGNPADLVSLPKVPDRLPDVLSVSEVNELLDQPFKD 136 Query: 65 --PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + L L+ G R +E ++L GD A V + Sbjct: 137 GPLGLRDQAALELLYGCGLRASELISLDLGDVFFAEGILRVMGKGSR------------- 183 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-RTGRTEKARIWEVTDRTVRTWI 181 R+VP+ S L + + + + ++ AR ++ + + T + Sbjct: 184 ------ERIVPIGGS-AQRVLLDYLENGRPKLAKPSKTDGAVILNARGGRLSRQALHTIV 236 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A A + PHT RHS+A HML G L+ +Q ++GH IS+T++Y V Sbjct: 237 RTAGATIGR------PDLHPHTLRHSFATHMLEGGADLRTIQEILGHSDISTTQIYVHVD 290 Query: 242 ALDVAARHRVQFAMPESDA 260 + + A Sbjct: 291 RSHIREEYLAAHPRAHLKA 309 >UniRef50_C0W9S4 Tyrosine recombinase xerC n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9S4_9FIRM Length = 302 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 32/257 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 A + ++ S + + + + + +LP +L E++ LL Sbjct: 71 RRTIARRISSLRSFYRYL-MREGLTDKNPFTKVKTPKLEKKLPVFLEEFEMNHLLELPDL 129 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + LL L++TG R++E + LT L+ Y Sbjct: 130 STELGQRDRALLEFLYSTGCRVSELVGLTLTRLDLSNRY-------------------AL 170 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN--RRTGRTEKARIWEVTDRTVRT 179 + R+VPL + + ++ ME+ R +T R+VR Sbjct: 171 LLGKGHKERIVPLGHPCIRAMNAYLTGARRVLMEKYEVPSHDFIFVNHRGTPLTARSVRR 230 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + V A + V+PHT RH++A H+L G L+ +Q L+GH S+S+T++YT Sbjct: 231 ILDRYVEMA-----SIQKHVSPHTIRHTFATHLLDHGADLRSVQELLGHASLSTTQIYTH 285 Query: 240 VFALDVAARHRVQFAMP 256 V A +A+ ++ Sbjct: 286 VTADRIASVYKKHHPRA 302 >UniRef50_UPI0001C41B06 tyrosine recombinase XerC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B06 Length = 326 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 86/230 (37%), Gaps = 43/230 (18%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVP------------DLHRKMLLATLWNTGARI 83 L Q LPK L EV +L+ V + K++L L++TG RI Sbjct: 127 LEDVQNPKRTKSLPKSLTEKEVKSLIDAVQITDEDSELKKKAKMRDKVILEFLYSTGLRI 186 Query: 84 NEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL 143 +E + L + D V+ + R+V L D + Sbjct: 187 SELVKLQKKDIDFDERTIRVRGKG-------------------EKDRIV-LFDENTRDLI 226 Query: 144 QTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 + + ++T R V+ I E A VTPH Sbjct: 227 DNYIETQNQ------KSEYLFINKNGRKLTPRYVQMMIKEYAEKAG-----IKKKVTPHV 275 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 RHS+A H+L G+ ++V+Q L+GH S+S+T++YT V + + + Sbjct: 276 LRHSFATHLLKNGVDIRVIQQLLGHSSLSTTQIYTNVDMDTIKSVYDHAR 325 >UniRef50_UPI0001C31A82 tyrosine recombinase XerD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A82 Length = 320 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 87/254 (34%), Gaps = 31/254 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 V + S + +D L+ +LPK L EV LL Sbjct: 87 TVQRKVACLRSFYRHLRREEILDRDPTAELKGPPR-GKKLPKVLSRDEVQHLLSQPRGTG 145 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + LL ++ G R +EA+ + + + R Sbjct: 146 PAALRDRALLELMYACGLRASEAVDMQLDELDVDDGIL-------------------RAN 186 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RLVP+ + L+ + + + M R +T + + + Sbjct: 187 GKGNKERLVPIGSK-ALDALRHYLTRGRPQMVGLREEKRVFVNQRGHGLTRQGLYKIVQR 245 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A ++PHT RH++A H+L G L+ LQ ++GH I++T++YT + A Sbjct: 246 HARTAG-----LGDKMSPHTLRHTFATHLLAGGCDLRSLQEMLGHADIATTQIYTHLSAE 300 Query: 244 DVAARHRVQFAMPE 257 + + + Sbjct: 301 RLRDVYFDAHPRAQ 314 >UniRef50_D2Q578 Integrase/recombinase n=3 Tax=Bifidobacterium RepID=D2Q578_9BIFI Length = 306 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 83/266 (31%), Gaps = 43/266 (16%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 S A AV + A+ + D LP L + L+ V Sbjct: 68 RSSMARKTVAVRGFFAWTH-ERGVTNANPAAMLMTPKIPDTLPAVLSESQAEKLMDCVDE 126 Query: 66 ---------------DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQ 110 L +L L+ TG R+ E + L D + V Sbjct: 127 QMPKSRTKSVRKQAVGLRNAAMLEVLYATGIRVAELVGLDVHDVAFDNRTMKVTGKG--- 183 Query: 111 RTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIW 170 R+VP ++ + + + R A+ Sbjct: 184 ----------------NKQRVVPFGVP-AEQSIRRWLEDGRPRLVRARSADALFLGAQGN 226 Query: 171 EVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKS 230 + R VR + E A ++PH RHS A H+L G L+ +Q L+GH S Sbjct: 227 RIDQRVVRQVVHECAQRAGVP------DISPHALRHSAATHLLDGGADLRQVQELLGHSS 280 Query: 231 ISSTEVYTKVFALDVAARHRVQFAMP 256 + +T+ YT V + AR+ F Sbjct: 281 LKTTQRYTHVSIEQLKARYGQAFPRA 306 >UniRef50_A8FD78 Tyrosine recombinase xerC n=89 Tax=Bacillaceae RepID=XERC_BACP2 Length = 305 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 97/260 (37%), Gaps = 34/260 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL--- 61 + + V A+ S + L + L + +P +L E+ L Sbjct: 68 LTRRTISKKVSALRSFYKFL-LREQLVKENPFLLVSLPKQDKRIPSFLYEEELKELFTVS 126 Query: 62 --HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + +L L+ TG R++E +L D L+ V KQ Sbjct: 127 DVSTPLGQRNQAILELLYATGMRVSELCSLKESDLDLSMDTVLVHGKGSKQ--------- 177 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG---RTEKARIWEVTDRT 176 R VP S+ L T + ++ ++ + + R +TDR Sbjct: 178 ----------RYVPFG-SYAHEALITYLEDGRLKLKAKGKDRADAYVFLNQRGAPLTDRG 226 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 VR + E + A + ++ + PH RH++A H+L G L+ +Q L+GH ++SST+V Sbjct: 227 VRFILTELMKKA-----SGTLHIHPHMLRHTFATHLLNEGADLRSVQELLGHSNLSSTQV 281 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT V + + Sbjct: 282 YTHVSKDSLRKTYMSHHPRA 301 >UniRef50_B0TH94 Tyrosine recombinase xerc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH94_HELMI Length = 340 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 88/259 (33%), Gaps = 35/259 (13%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 S A + A + + + + + LPK L EVS LL Sbjct: 108 RSSLARKLAAWRGFFRYLVREGQLT-SHPMKRLKSPKLGRPLPKTLSESEVSCLLSAAER 166 Query: 67 -------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L ++ + +G R+ E L G Y V Sbjct: 167 RGDEPLALRNLAMVELFYASGLRVAELCGLDLGSVDAGLGYVRVLGKGG----------- 215 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR--TGRTEKARIWEVTDRTV 177 R+VP+ + + + + Q + + RR R R ++ R Sbjct: 216 --------KERIVPVGEQ-ALEAISRYLKQGRPALARRQREVSPALFLNHRGRRLSVRGA 266 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + + DG ++PHT RH++A H+L G L+ +Q ++GH +S+T++Y Sbjct: 267 QDILSRIA-----DGAALERGISPHTLRHTFATHLLDGGADLRSVQEMLGHAKLSTTQIY 321 Query: 238 TKVFALDVAARHRVQFAMP 256 T V A + + Sbjct: 322 THVSAERLKEIYHKTHPRA 340 >UniRef50_B1GYR5 Tyrosine recombinase XerC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR5_UNCTG Length = 314 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 97/253 (38%), Gaps = 26/253 (10%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + + A + ++S + + I ++ ++P +L E+ LL+ Sbjct: 86 LSRATLARKLAVLHSFYKFLIINKIIKENFIESMPASLKKDKKVPSFLTENEMQMLLNLP 145 Query: 65 P-DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + ++ ++ G RI E ++L + V Sbjct: 146 DLKPRDRAMIELFYSCGLRIEELVSLDLKNIDFISNVVTVTGK----------------- 188 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 + R+VP+ D + ++ + + + + R+ R + RT R + Sbjct: 189 --RNKERIVPVGD-ICLHAIKDYINKRRNLGLPYDIRSPVFLSDRAKRLGQRTARRILHR 245 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A F+ V+PHT RH++A H+L G L+ +Q ++GHK++SST++YT V Sbjct: 246 YFVKAG-----FTKKVSPHTLRHTFATHILDRGCDLRSVQEMLGHKNLSSTQIYTHVTIE 300 Query: 244 DVAARHRVQFAMP 256 + ++ Sbjct: 301 SLKKVYKETHPRA 313 >UniRef50_D2RKK7 Tyrosine recombinase XerC n=3 Tax=Firmicutes RepID=D2RKK7_ACIFE Length = 311 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + A + ++ S + + + + +LP +L E++ LL Sbjct: 78 LSRRTIARRISSLRSFYRYLRREGRV-KTNPFTRVRTPKLEKKLPVFLEEFEINLLLRMP 136 Query: 65 P-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + +L L++TG R++E + LT L Y Sbjct: 137 DCTTVLGRRDRAILEFLYSTGCRVSELVGLTLTRVDLGNRYAI----------------- 179 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR---NRRTGRTEKARIWEVTDRT 176 + + RLVPL V+ ++ + + + + R +R ++ R+ Sbjct: 180 --LLGKGRKERLVPLGHP-CVAAMEDYLRHSRGTLMEKYQAPRHQTVFVNSRGRPLSARS 236 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 VR + + V A V+PHT RH++A H+L G L+ +Q L+GH S+S+T++ Sbjct: 237 VRRILDKYVEMTA-----LQKHVSPHTIRHTFATHLLDHGADLRAVQELLGHVSLSTTQI 291 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT V A + A + Sbjct: 292 YTHVTAERLTAVYEKHHPRA 311 >UniRef50_D2R836 Tyrosine recombinase XerC n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R836_9PLAN Length = 323 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 93/254 (36%), Gaps = 21/254 (8%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 A + ++ + + A D + +LP +L E+ LL P Sbjct: 71 SIARRLASLRTFYKFAQREGMAD-SNPAKPLRNPRKDRKLPHFLAGDELGKLLEAPPADD 129 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + +L TL++ G R++E + + D L ++ K+R A R Sbjct: 130 PAGLRDRAMLETLYSAGLRVSELVGMNDEDLDLDEGVVRIRGKGSKERLAPLGSFALRAI 189 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 HR V+ + + T +T R+V + + Sbjct: 190 KKWLAHR----------KLASISVSSTRKSASKAGHGTPVFTNKFGKRLTTRSVARMLEK 239 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 + D TPHT RH++A H+L G ++ +Q L+GHKS+ +T++YT V Sbjct: 240 YLKLTGLDL-----RTTPHTLRHTFATHLLDRGADIRSVQELLGHKSLVTTQIYTHVSTA 294 Query: 244 DVAARHRVQFAMPE 257 + A + Sbjct: 295 ALKAVYERAHPRAR 308 >UniRef50_C3RQN8 Site-specific tyrosine recombinase xerD n=3 Tax=Bacteria RepID=C3RQN8_9MOLU Length = 302 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 32/260 (12%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 +S + + + + ++ + I ++ + +LP L E+ + Sbjct: 63 LSKTNCTNSISRKLVSLRMLY-IFLVKENIVKENLMSSFTLPKRDKKLPIILSQEEMIEI 121 Query: 61 LHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 L + + ++ L+ TG RI+E L LT D ++ + V Sbjct: 122 LDGIIVCDAISSRNRCMVELLYATGMRISELLNLTLKDLNIKMGFIKVIGKG-------- 173 Query: 116 ARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDR 175 R++P+ S+ L+ + + +N ++ Sbjct: 174 -----------NKERMIPIG-SYVGEILEQYINDYRAEFNIKNDSL-LFFNKHGQRLSRE 220 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 + + V + + + V+PHTFRH++A H+L G L+ +Q L+GH IS+T Sbjct: 221 EFYSILQTIV-----NSTSITKKVSPHTFRHTFATHLLENGADLRSIQELLGHSDISTTT 275 Query: 236 VYTKVFALDVAARHRVQFAM 255 +YT + + + ++ Sbjct: 276 IYTHISNQKIRSEYQQFHPR 295 >UniRef50_Q01SN8 Tyrosine recombinase XerD subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN8_SOLUE Length = 302 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 84/257 (32%), Gaps = 31/257 (12%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + + + + + + + +PKYL E+ ++ Sbjct: 72 LSNRSVGRHLTTLRNFYGFLLREGKV-ATDPTEHLRTPRQWQTIPKYLNLEEIERIIQAP 130 Query: 65 P-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L + ++ L+ +G R++E L GD L Sbjct: 131 DLAKPLGLRDRAMMEVLYASGLRVSELCKLGIGDLDLEYQVL------------------ 172 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R RLVP+ V ++ + + + + AR +T + Sbjct: 173 -RTTGKGNKQRLVPVG-KAAVLAVRAYLESGRPGLLKGRASRYLFVTARGGCMTRQGFWK 230 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + A +TPH RHS+A H+L G L+ +Q ++GH IS+T++YT Sbjct: 231 LLAAYGRKAG-----IFHGLTPHVLRHSFATHLLEGGADLRSVQVMLGHADISTTQIYTH 285 Query: 240 VFALDVAARHRVQFAMP 256 V + A Sbjct: 286 VMRSRLRATVEKHHPRA 302 >UniRef50_Q11RL1 Site-specific recombinase n=15 Tax=Bacteroidetes RepID=Q11RL1_CYTH3 Length = 299 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 93/252 (36%), Gaps = 32/252 (12%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----HYVP 65 A ++ + S + L I +L + +LP L PE+ +L Sbjct: 74 ARILSGIKSFFRFL-LMEEIRDEDPSSLIDSPKLGRKLPDTLSFPEIEQILLAIDLSTPE 132 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 + + +L TL++ G R++E L + + V Sbjct: 133 GMRNRAMLETLYSCGLRVSELTDLKISNLFFDDGFVKV-------------------LGK 173 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMER-RNRRTGRTEKARIWEVTDRTVRTWIGEA 184 RLVP+ + +++ ++ + R +++ V T I Sbjct: 174 GNKERLVPIGRD-ARKYIGMYRNEVRCHLDIVKGAENYVFLNRRGNKLSRVMVFTIIKNL 232 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 + V+PHTFRHS+A H++ G L+ +Q ++GH+SI++TE+YT + Sbjct: 233 AVK-----IGLKKTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDY 287 Query: 245 VAARHRVQFAMP 256 + + Sbjct: 288 LQQIIKDFHPRS 299 >UniRef50_C8XHP9 Tyrosine recombinase XerD n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHP9_NAKMY Length = 353 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 92/250 (36%), Gaps = 23/250 (9%) Query: 26 LPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY--------VPDLHRKMLLATLW 77 L LPK L + LL L + LL L+ Sbjct: 109 LNEGTAEADPSRDVHPPTPARRLPKALPVEAIGRLLDAAGSADPDGPRGLRDRALLELLY 168 Query: 78 NTGARINEALALTRGDFSLAPPYPFVQLATL-----KQRTEKAARTAGRMPAGQQTHRLV 132 TGARI+E + L D L P + +T + + R+ RLV Sbjct: 169 ATGARISEVVGLDVDDIDLGPGRLAGRSSTDPTDPTDPQVAPPITSVVRLHGKGAKERLV 228 Query: 133 PLSDSWYVSQLQTMVAQLKIPMERRNRRTG-----RTEKARIWEVTDRTVRTWIGEAVAA 187 P+ S+ + L+ + + + + R G R ++ ++ + +A Sbjct: 229 PVG-SFALRALEAYLVRGRPVLAAAGRGAGPARGALFLNIRGGRLSRQSAWQVLADAARR 287 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 A V+PHT RHS+A H+L G ++ +Q L+GH S+++T++YT V + Sbjct: 288 AGLPASG----VSPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTLVTVDALRE 343 Query: 248 RHRVQFAMPE 257 + Sbjct: 344 VYVTAHPRAR 353 >UniRef50_C2CV68 Integrase/recombinase XerD n=3 Tax=Bifidobacteriaceae RepID=C2CV68_GARVA Length = 335 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 31/266 (11%) Query: 4 SVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY 63 + IH + M+ A P+ A + + LP L EV ++ Sbjct: 89 ASIHEWNKFMLSNAQIASDPS------------AEVKAPKQAEHLPDVLSISEVERVIDA 136 Query: 64 VPD--------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 L + L+ L+ TGAR++EA+ L D L + KQR Sbjct: 137 AGGFGSTDAVSLRDRALVEFLYATGARVSEAVGLKFEDIDLTESVVRLSGKGQKQRLVPI 196 Query: 116 ARTAGRMPAGQQT-HRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG---RTEKARIWE 171 + A R R P+ S T ++LK P+ ++ R Sbjct: 197 GKCAVRALRDYLANAR--PILASRAQKSPATAKSRLKSPLNSSSKSANTHVIFLNKRGKS 254 Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 ++ ++ I A A + PHT RHS+A H++ G ++ +Q L+GH S+ Sbjct: 255 LSRQSAWEAISRAGKMA-----KIGKELHPHTLRHSFATHLISGGADVRTVQELLGHASV 309 Query: 232 SSTEVYTKVFALDVAARHRVQFAMPE 257 ++T++YT + + + + Sbjct: 310 TTTQIYTHISPDALMEAYVMSHPRAR 335 >UniRef50_A6CBK7 Integrase/recombinase n=5 Tax=Planctomycetaceae RepID=A6CBK7_9PLAN Length = 313 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 31/255 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 A + + S + + +LP +L ++ LL P Sbjct: 82 TIARRLACLRSFFRYCCR-EGYSKTNPAKPLRTPRTGRKLPHFLTTDQIGTLLEAPPANQ 140 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + +L TL++ G R++E +AL D+ V Sbjct: 141 KMGLRDRAILETLYSAGLRVSELVALNVSDWDQDANIIRV-------------------L 181 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 + R+ P+ S+ L + + + +T R+V + + Sbjct: 182 GKGRKERIAPIG-SFAAKALTHWLEEREAKPGAHPDSDALFLNRLKTRLTSRSVGRMLEK 240 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 + D +PHT RH++A H+L G L+ +Q L+GHKS+++T++YT V Sbjct: 241 YLLQTGLD-----KKTSPHTLRHTFATHLLDGGADLRSVQELLGHKSLTTTQIYTHVSTK 295 Query: 244 DVAARHRVQFAMPES 258 + + + Sbjct: 296 RLLETYEKAHPHAQR 310 >UniRef50_C7PUZ0 Tyrosine recombinase XerD n=2 Tax=Sphingobacteriales RepID=C7PUZ0_CHIPD Length = 316 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 95/251 (37%), Gaps = 32/251 (12%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY-----VP 65 A ++ + + + +L + L + +LP L E+ ++ Sbjct: 91 ARIISGIKAFYRYLALEDVV-RQDPTILLEAPKTKRQLPDVLSFEEIEQIIGQIKAGTPE 149 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 + +L T+++ G R++E L + V Sbjct: 150 GQRNRAILETMYSCGLRVSEVTNLQISQLHFDAGFIRVVGKGD----------------- 192 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIP-MERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 RLVP+ S V + ++++ ++ + R +T + I E Sbjct: 193 --KERLVPIG-SDAVKYINIYKDEVRVHVPVKKGQEDILFLNRRGSALTRVMIFLVIKEL 249 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 AAA D V+PHTFRHS+A H++ G L+ +Q ++GH+SI++TE+YT + Sbjct: 250 TAAAGID-----KQVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDREY 304 Query: 245 VAARHRVQFAM 255 + + Sbjct: 305 LRDTLQRFHPR 315 >UniRef50_Q1NT18 Tyrosine recombinase XerC n=2 Tax=Deltaproteobacteria RepID=Q1NT18_9DELT Length = 339 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 95/266 (35%), Gaps = 41/266 (15%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S A + A+ S + I A LP L EV +LL Sbjct: 100 SSVARKLSALRSFFRFLRKNGII-NDDPAAAIAAPKGEGYLPVVLSVDEVFSLLEMPGAG 158 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + +L L+ TG R++E L LA V Sbjct: 159 DRFAARDRAILELLYATGLRVSELAGLDLAQLDLADGMVRVVGKG--------------- 203 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM----------ERRNRRTGRTEKARIWEV 172 RLVP+ + V+ ++ + Q ++ + ++ +R + Sbjct: 204 ----NKERLVPMG-TAAVAAIEAYLPQRQVLLRQTAGQQKEGKKARGADPLLVNSRGGRL 258 Query: 173 TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSIS 232 T R++ + A + V+PH RHS+A H+L G L+V+Q L+GH S+S Sbjct: 259 TSRSIERLVKMYAERAG-----IAARVSPHALRHSFATHLLEMGADLRVVQELLGHASLS 313 Query: 233 STEVYTKVFALDVAARHRVQFAMPES 258 +T+ YT + + A + + S Sbjct: 314 TTQRYTHLNLDHLTAVYDQAHPLANS 339 >UniRef50_B3SZY7 Putative Phage integrase family protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY7_9ZZZZ Length = 298 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 32/253 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----HY 63 V ++ + S + L + +LP L E+ +L + Sbjct: 70 SIKRAVSSIRTYHNFLSAEGHM-KDNPAQLLDTPKIPRKLPNVLTIQEIDKILGIIPENA 128 Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + +++ G R+ E D VQ KQ Sbjct: 129 PMAQRDLAIFEMMYSCGLRVTELCDFKTSDILWDSEMIRVQGKGSKQ------------- 175 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG-RTEKARIWEVTDRTVRTWIG 182 R VP+ L+ + + + +N ++T + + Sbjct: 176 ------RFVPIG-PIARENLKNYLNHERNTLADKNPNVAEVFLSRNGRKLTRMMIWVLLK 228 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + V+PHT RHS+A H+L G L+ +Q ++GH I++T+VYT + Sbjct: 229 KW-----TESAEVKKEVSPHTLRHSFATHLLEGGADLRSVQEMLGHTDITTTQVYTHLDK 283 Query: 243 LDVAARHRVQFAM 255 + HR Sbjct: 284 EHLKEVHRTYHPR 296 >UniRef50_Q2RJP7 Tyrosine recombinase XerD subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJP7_MOOTA Length = 313 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 98/264 (37%), Gaps = 33/264 (12%) Query: 6 IHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH--- 62 S + A+ + + + + +AL LP L E+ LL Sbjct: 73 QRSSMNRKLAALRAFYRFLLRAGQVQ-SSPVALLSGPRREKRLPGCLSHAEMEKLLSIPA 131 Query: 63 -YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + +L TL+ +G R+ E + + + D L Y V Sbjct: 132 TTPLGLRDRAILETLYASGIRVAELVGMDQDDLDLVAGYARV------------------ 173 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN---RRTGRTEKARIWEVTDRTVR 178 + R+VPL + V L+ + + + + R +T R VR Sbjct: 174 -LGKGRRERVVPLGR-YAVKALENYLHRARPELAARRIPPEPRALFLNHLGGRLTTRGVR 231 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + V AA V+PHT RH++A H+L G L+V+Q L+GH +++T++YT Sbjct: 232 ERLSHYVEKAALRRG-----VSPHTIRHTFATHLLEGGADLRVVQELLGHIRLATTQIYT 286 Query: 239 KVFALDVAARHRVQFAMPESDAVA 262 + + +R D + Sbjct: 287 HISQSQLREVYRQFHPRASRDNID 310 >UniRef50_D2MQ50 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ50_9FIRM Length = 297 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 42/264 (15%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S SV+H M ++ + + ++L Q+ LP +L EV LL Sbjct: 68 SNSVVH-----MATSIRNFHEDIEFSTG--EENPVSLIQVRKNETYLPSFLSVEEVKQLL 120 Query: 62 HYVPDLHR-------KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEK 114 + + +L ++ G RI+E +LT L + Sbjct: 121 NSFT--RDDPKQELNRTILELIYACGLRISELCSLTVAQVQLETGILRI----------- 167 Query: 115 AARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTD 174 R+VP+ + V L + ++ + T +T Sbjct: 168 --------LGKGNKERIVPIPNQV-VKDLDYYLNLIRPIWNQHKTNTF-FINHLGNRITA 217 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 R+++ + + F +TPH+ RH+YA H+L AG L+++Q L+GH +I +T Sbjct: 218 RSIQLLLKQKAMECG-----FQKDITPHSLRHTYATHLLQAGADLRIIQELLGHSNIKTT 272 Query: 235 EVYTKVFALDVAARHRVQFAMPES 258 E+YT V + ++ + + Sbjct: 273 EIYTHVQNRQLFEAYQNFHPLSKK 296 >UniRef50_B1ZQV6 Tyrosine recombinase XerD n=3 Tax=Verrucomicrobia RepID=B1ZQV6_OPITP Length = 317 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 88/261 (33%), Gaps = 31/261 (11%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S S + A + A+ S + AL +P L E++ LL Sbjct: 79 SASYTVASLARKLSALRSLAHFL-VRERFRADDFTALLSGPKASRRIPGTLTEEEIARLL 137 Query: 62 HYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 L + LL +++G R++E L L + V Sbjct: 138 AAPTGGDARALRDRALLELFYSSGLRVSELAGLLLQQVDLEHGFLRV------------- 184 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT 176 R+VP+ + L T + + R + ++ Sbjct: 185 ------FGKGAKERVVPIGGK-AIEALATYLTAGRPHFVRSRTGSQLFLNKNGGPLSRVM 237 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 + + + A + V PH RHS+A H+L G L+ +Q ++GH SIS+T++ Sbjct: 238 LWMLVKKYAKRAG-----LTKNVKPHGLRHSFATHLLSGGADLRAIQEMLGHASISTTQI 292 Query: 237 YTKVFALDVAARHRVQFAMPE 257 YT V + + +H Sbjct: 293 YTSVESQRLLEQHDKFHPRNR 313 >UniRef50_C2KPQ6 Tyrosine recombinase n=2 Tax=Mobiluncus mulieris RepID=C2KPQ6_9ACTO Length = 319 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 31/253 (12%) Query: 12 VMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV------P 65 + A S + ++ + + + + LP+ L E+ ALL Sbjct: 89 RCLAAARSWHRYLFDSGSL-GANVASSVKPAKLPRRLPETLSLEEMEALLAAASSPGDSN 147 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 L + LL L+ +GARI+EA+ L D R+ Sbjct: 148 SLRDRALLEFLYASGARISEAMNLVLDDIDFE-----------------TEPALVRLFGK 190 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR-TEKARIWEVTDRTVRTWIGEA 184 + R+ L LQ + +++ + + + GR ++ +T I A Sbjct: 191 GRKERISMLGHQ-ACQALQAYLVRVRPTLAEKGQSRGRVFLNTYGKPMSRQTAWAIIQAA 249 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 A PV PHT RH +A H+L G ++V+Q L+GH S+++TE+YTKV Sbjct: 250 AKRA-----QIDRPVHPHTLRHCFATHLLQGGADIRVVQELLGHASVTTTEIYTKVSKQM 304 Query: 245 VAARHRVQFAMPE 257 + + Sbjct: 305 LLEVYASAHPRAR 317 >UniRef50_C0WCK3 Recombinase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCK3_9FIRM Length = 298 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 97/254 (38%), Gaps = 32/254 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL-----LHY 63 SA + A+ + + + I+ + + LPK L EV+ L L Sbjct: 71 SSARKLAALKAFFRFMTAEGTIE-VDPCEVVESETRGMVLPKVLSVDEVNRLFEAPDLDT 129 Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + +L ++ TG R++E LAL G +LA Y Sbjct: 130 PEGYRDRTMLEVMYATGMRVSELLALKVGSVNLASHYVI-------------------AY 170 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR-TGRTEKARIWEVTDRTVRTWIG 182 RL+PL + + L+ +++++ + NR R +T + I Sbjct: 171 GKGAKERLIPLG-HYAIEYLKEYLSRVRPHFVKENRPCDDLFLTIRGTGMTRQRFWQLIK 229 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 V + +TPH RHS+A HML G L+ +Q L+GH IS+T++YT + Sbjct: 230 NYGLK-----VHIAKSLTPHILRHSFATHMLDNGADLRTVQELLGHSDISTTQIYTHLTN 284 Query: 243 LDVAARHRVQFAMP 256 + A + Sbjct: 285 HRLKAIYDKSHPRA 298 >UniRef50_B9YAX8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAX8_9FIRM Length = 323 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 93/256 (36%), Gaps = 32/256 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + M+ + S + + ++ +P++L ++ L Sbjct: 87 SSFSRMLSTLRSFYHYLIRYKGV-KVNPTRGLRAPKLNRTIPEFLTFDQMMTLFDSFDLN 145 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + +L T++ G R++E +LT + L V KQ Sbjct: 146 DPAALRNRAILETMYACGLRVSEVCSLTLAELDLNERILTVTGKGDKQ------------ 193 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP + + + + + R +T R V+ + Sbjct: 194 -------RIVPFYKRLRTLLTRYLRDSRALYL--KEEHGFVFVSQRGAPITPRAVQLILA 244 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 +A A + P+ PH RHS+A H+L G+ L+ +Q L+GH S+S+T++YT V Sbjct: 245 QAGQDAG-----LNQPLHPHILRHSFATHLLDNGVDLRTVQELLGHSSLSTTQIYTHVTV 299 Query: 243 LDVAARHRVQFAMPES 258 + +S Sbjct: 300 DRLKQSVDAAHPHSKS 315 >UniRef50_D0AM75 Phage integrase n=14 Tax=Bacilli RepID=D0AM75_ENTFC Length = 301 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 33/261 (12%) Query: 3 GSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH 62 S + + + ++ S Q I + + + LP++ E+ AL Sbjct: 67 SSYSRNSISRKIASLRSFYQYLLKEEVI-KENPFSYVHLKKKNLRLPRFFYENEMQALFD 125 Query: 63 YVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 V L + LL L+ +G R++E +L+ D + Sbjct: 126 SVAGDSPLDLRNRALLEVLYGSGIRLSECSSLSVSDIDFDSEVMLIHGKG---------- 175 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR--NRRTGRTEKARIWEVTDR 175 R PL S+ LQ + + + + +T Sbjct: 176 ---------NKERYAPLG-SFAQDALQEYFREGRQVLMTKYHEEHDIVFVNHHGKPITPT 225 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 + + + + ++ D + PH RH++A H+L G L+ +Q L+GH ++S+T+ Sbjct: 226 GIEYVLNQMIKKSSLDS-----DIHPHMLRHTFATHLLNNGADLRTVQELLGHANLSTTQ 280 Query: 236 VYTKVFALDVAARHRVQFAMP 256 +Y V + +R Sbjct: 281 IYAHVTKESLQKNYRSFHPRA 301 >UniRef50_P44630 Tyrosine recombinase xerD n=84 Tax=Proteobacteria RepID=XERD_HAEIN Length = 297 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 93/252 (36%), Gaps = 30/252 (11%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 +A M+ A+ Q A+ + LPKYL +VS LL+ Sbjct: 70 STARMLSAMRKLFQYLYREKYR-VDDPSAVLSSPKLPSRLPKYLTEQQVSDLLNTPNVEV 128 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 +L K +L L+ TG R+ E ++LT + S+ V Sbjct: 129 PLELRDKAMLELLYATGLRVTELVSLTIENMSVQQGVVRVIGKG---------------- 172 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R+VP+ + ++ + + + R ++T +T + Sbjct: 173 ---NKERIVPMGEEAAY-WVRQFMLYGRPVLLNGQSSDVVFPSQRAQQMTRQTFWHRVKH 228 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A D +PH RH++A H++ G L+V+Q L+GH +S+T++YT V Sbjct: 229 YAILADIDADAL----SPHVLRHAFATHLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKE 284 Query: 244 DVAARHRVQFAM 255 + H Sbjct: 285 RLKRLHERFHPR 296 >UniRef50_C0QJ38 Site-specific recombinase XerD (DNA replication, recombination and repair) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ38_DESAH Length = 297 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 89/256 (34%), Gaps = 37/256 (14%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 V + + A+ S + I+ + +P++L E+ LL + Sbjct: 73 VTRRTISRRLSALKSFFNYLVVVGKIE-VNPAQGVSAPKLPRSIPQFLTVDELFTLLDSI 131 Query: 65 P-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 D + + ++TG R++E L GD V+ Sbjct: 132 KTRTVVDKRNRAVFELFYSTGMRVSELSNLNVGDIDRESHLVRVRGKG------------ 179 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 RLVP+ D + + +D ++R Sbjct: 180 -------NRERLVPVGD-RALKAVDDYRT------CIDGEFGALFLNRDAHRFSDSSIRR 225 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + V A VPV+PHT RHS+A HML AG L+ +Q ++GH S+SST++YT Sbjct: 226 VLSVLVKACG-----LGVPVSPHTLRHSFATHMLDAGADLRGIQEILGHASLSSTQIYTH 280 Query: 240 VFALDVAARHRVQFAM 255 V + + Sbjct: 281 VTYARLMEVYDRAHPR 296 >UniRef50_B0VFY6 Tyrosine recombinase xerD n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFY6_9BACT Length = 313 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 30/232 (12%) Query: 30 IDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARIN 84 I+ + L + +LP L E+ LL+ +P ++ K+++ L+ TG RI+ Sbjct: 107 IETKVDMDLVPRIKLGVQLPDVLTVEEMFQLLNSLPVKTPLEIRNKLMMELLYATGMRIS 166 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 E L+++ D +L V KQR T + A Sbjct: 167 ELLSISLHDLNLTERVILVHGKGSKQRYVPYVDTLDELFAK------------------- 207 Query: 145 TMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTF 204 + Q + + + + R ++ + +AV A VTPHTF Sbjct: 208 -YLKQSRPILLKLKQSELLFLNNRGERMSRMGFWKILRKAVLEA-----NIKKEVTPHTF 261 Query: 205 RHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 RHS+A H+L G+ L+++Q+L+GH SI +T++YT + + ++ Sbjct: 262 RHSFATHLLEGGVNLRIVQALLGHSSIDTTQIYTHIDMKRLVETYKEYHPRA 313 >UniRef50_B2KBN7 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBN7_ELUMP Length = 295 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 86/255 (33%), Gaps = 35/255 (13%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL- 67 + + S + I L + LPK+L E L+ + Sbjct: 71 TVLRKISVMRSFAKYLLKHEVIKN-NPFKLLPLPKREKLLPKFLTQEETDRLIDTAANQG 129 Query: 68 ----HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 K L ++++G R +E L+ D L V Sbjct: 130 KLPARDKALFELIYSSGLRRSEVTGLSIKDIDLNLGVVRVMGKGS--------------- 174 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RLVP++D + L+ ++ + N +T + + Sbjct: 175 ----KERLVPITD-LAIEALKEYLSTRGVY----NSGDPLFLNRLGGRLTGDGLAYLVKN 225 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A + VT H+ RHS+A HML G L+ LQ ++GHKS+S+T+VYT V Sbjct: 226 ITIKA-----NLARKVTAHSLRHSFATHMLNNGCDLRSLQEMLGHKSLSATQVYTHVSLD 280 Query: 244 DVAARHRVQFAMPES 258 + + + Sbjct: 281 RLKKIYGQTHPRSKE 295 >UniRef50_B4D116 Integrase family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D116_9BACT Length = 315 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 31/246 (12%) Query: 16 AVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----HYVPDLHRK 70 A+ + I+ A + + LP+ + +V LL L + Sbjct: 95 ALKIFFRWLHARKRIERDVA-EVLPLPRTERYLPETMNELQVDRLLEGISIDAPRGLRDR 153 Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 LL L+ +G R++E + + L V R Sbjct: 154 ALLELLYASGLRVSELVNARLENLDLDARIIRVTGKG-------------------NKMR 194 Query: 131 LVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAA 190 LVP+ ++ + + + M + + +R ++T + + A Sbjct: 195 LVPVGQK-ACDAIRAYLEKERPEMVGKKTGSEVFLSSRGTKLTTVRIWQIVKACAKNAGL 253 Query: 191 DGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHR 250 D + V PH RHS+A H+L G L+++Q ++GH IS+T++YT V + A H Sbjct: 254 D-----INVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQIYTHVDQQRLKAVHH 308 Query: 251 VQFAMP 256 Sbjct: 309 RFHPRA 314 >UniRef50_A9F3K0 Site-specific recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3K0_SORC5 Length = 323 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 96/259 (37%), Gaps = 32/259 (12%) Query: 3 GSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH 62 + S +A + AV + I+ AL + V LPK L E++ L+ Sbjct: 92 AGISASSAARHLSAVRGFVRFLLRERRIERD-PCALVERPRVGRRLPKVLSFDEIALLIE 150 Query: 63 YVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 L + +L ++ G R++E + L D Sbjct: 151 APEQGTFKGLRDRAMLHVMYAAGLRVSEVVRLKLADIDRRKGIVMALGKGG--------- 201 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 RLVPL + ++ + + +L+ R R +T + V Sbjct: 202 ----------KRRLVPLGEP-ALAAIDAYL-ELRATHPRSAATQVLFLSPRGGPLTRQAV 249 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 +G A V + P +PH RHS+A H+L G L+ +Q+L+GH ++ +TE+Y Sbjct: 250 WKLLGGYARA-----VGIAKPSSPHKLRHSFATHLLEGGADLRSVQALLGHANVVTTEIY 304 Query: 238 TKVFALDVAARHRVQFAMP 256 T + V A +R Sbjct: 305 THLADDHVRAAYRRAHPRA 323 >UniRef50_B2A335 Tyrosine recombinase xerC n=2 Tax=Clostridia RepID=XERC_NATTJ Length = 299 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 34/257 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S +A + A+ S + + I AL +LP++L EV L++ Sbjct: 69 STTARKLSAIRSLFKFLTREEKI-RSNTSALLATPKKERKLPEFLSIEEVEMLINAPGDD 127 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L K +L + +G R+ E L + L Y V Sbjct: 128 PFGLRDKAILEVFYCSGIRLGELWGLDLQNLDLQTGYLKVTGKG---------------- 171 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR----TGRTEKARIWEVTDRTVRT 179 RL PL S+ ++ ++ + + + ++N+ ++ R++R Sbjct: 172 ---NIERLAPLG-SFALAAIEDYLYNARPELLKKNKSVENCDALFLNKFGTRISQRSIRR 227 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + V A++ V+PH+ RHS+A H+L G L+ +Q L+GH +IS+T++YT Sbjct: 228 RVKKYVQQTASEH-----RVSPHSLRHSFATHLLEGGADLRAVQELLGHVNISTTQIYTH 282 Query: 240 VFALDVAARHRVQFAMP 256 V + + Sbjct: 283 VNQARMTEVYNKYHPRA 299 >UniRef50_Q1D804 Tyrosine recombinase xerC n=9 Tax=Deltaproteobacteria RepID=XERC_MYXXD Length = 300 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 92/254 (36%), Gaps = 34/254 (13%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP----- 65 A + ++ S + + + L + + LPK L EV A+L Sbjct: 73 ARRLASIKSFYKYLVRQKLL-PASPAKLVKSPKLPKTLPKVLPVEEVFAILDMPDVKTVL 131 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 L + +L L+ G RI+E L D + V Sbjct: 132 GLRDRAILELLYGGGLRISELCGLDLLDIDRSGRIVRVMGKGS----------------- 174 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGR---TEKARIWEVTDRTVRTWIG 182 RLVP++ + L+ +A+ + + R +T R++ + Sbjct: 175 --KERLVPVNAQS-IRALEAYLARRGELLATIRKDQAPEAMFLNFRGGRLTPRSIARHLD 231 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 V A + V+PH RHS+A H+L G ++ +Q L+GH S+S+T+ YT+V Sbjct: 232 TYVLKCA-----LTRKVSPHAMRHSFATHLLGGGADIRSIQELLGHSSLSTTQRYTQVTW 286 Query: 243 LDVAARHRVQFAMP 256 + + Sbjct: 287 EQLQQVYDSAHPRA 300 >UniRef50_B8FPN6 Tyrosine recombinase XerD n=2 Tax=Desulfitobacterium hafniense RepID=B8FPN6_DESHD Length = 322 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 85/278 (30%), Gaps = 54/278 (19%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A + + L + + LP L +S L+ D Sbjct: 71 RTLARYLATLRGFFAFL-LGEEMREDDPTEYLSTPKLEQHLPHVLSEGSISKLMGEGGDR 129 Query: 67 ---------------------------LHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 + ++ L+ G R++E + L D Sbjct: 130 DKEGPKPGKSSKKAGDSDSEGKDKGLLMRNMAMIEVLYGCGLRVSELVGLKVSDIIFETR 189 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR 159 + R+VP+ + + + LQ + + + +++ Sbjct: 190 TLRCRGKG-------------------NKERIVPIGE-YALEVLQNYLEHDRERLRGKHK 229 Query: 160 RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPL 219 +R +T + + + + + PH FRHS+A H+L G L Sbjct: 230 TEVLFLNSRGTALTRQGIWDILKKWA-----QTHGVQENIYPHKFRHSFATHLLDHGADL 284 Query: 220 KVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPE 257 + +Q ++GH I++T++YT + + R + Sbjct: 285 RSVQEMLGHADIATTQIYTHLSRQRLLEVFRKAHPRAD 322 >UniRef50_B1GYP8 Tyrosine recombinase XerD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYP8_UNCTG Length = 294 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 90/253 (35%), Gaps = 34/253 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 ++ ++ + + + + + LP L EV LL+ + D Sbjct: 70 RSIFRVIESLRQFYKFLNSED-LAKNNPTLYLATPNLPENLPDILTFDEVDLLLNSINDD 128 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + K +L L+ G R++E + L D +L + + Sbjct: 129 DEMHIRNKAMLELLYAAGLRVSELINLKFSDINLEDCFLRIIGKGS-------------- 174 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP + + + + + + N +++ + Sbjct: 175 -----KERLVPFGNK-AKFFISIYLKKRRPCL---NVNDHIFISRLGKKLSRIEFWRQLK 225 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 V + +TPHT RHS+A H+L G ++ +Q ++GH SI++T++YT + Sbjct: 226 NIAK-----NVGINKNITPHTLRHSFASHLLKGGADIRFVQEMLGHASITTTQIYTHLDE 280 Query: 243 LDVAARHRVQFAM 255 + +H+ Sbjct: 281 DRIVQQHKKFHPR 293 >UniRef50_B5EB31 Tyrosine recombinase XerD n=4 Tax=Deltaproteobacteria RepID=B5EB31_GEOBB Length = 292 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 31/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV--- 64 A + A+ + L A+ + +LP L EV ALL Sbjct: 65 RSRARALSALRMLHRFL-LREGYSELNPTAIIEAPKGVRKLPAVLSGREVEALLSSPLDT 123 Query: 65 --PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 +L K +L L+ TG R++E + L + +L+ Y Sbjct: 124 GAQELRDKAMLELLYATGLRVSELVGLKLSEVNLSAGYLM-------------------T 164 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP+ +S + Q + + + T ++ + I Sbjct: 165 IGKGDKERLVPMGES-ACHATGVYLQQARGELLKEKASTLLFLSRLGGGMSRQAFWNIIK 223 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A ++PHT RHS+A H+L G L+ +Q ++GH +SST++YT V Sbjct: 224 KRALQAGVRTS-----ISPHTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHVTR 278 Query: 243 LDVAARHRVQFAM 255 + H Sbjct: 279 ERMKKLHADFHPR 291 >UniRef50_C4LIF6 Integrase/recombinase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LIF6_CORK4 Length = 326 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 35/257 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S +A AV S + + + A A + LP L +V+ L+ P Sbjct: 97 SSAARATVAVRSLHRFSHEEGQLARDVA-AGVTVLRSGQSLPHALTVEQVNRLIEACPVN 155 Query: 66 ------DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L + ++ L+ TG RI+EAL L Y V Sbjct: 156 ESSNPIALRDRAVIELLYGTGMRISEALNLDIDSIDRNHAYVRVVGKG------------ 203 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 + RLVP+ + + + + + M +R+ + AR + ++V Sbjct: 204 -------RKERLVPIGAP-ALHAIDAWLVRGRPSMVKRSDK-ALFLNARGNRLGRQSVWK 254 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 ++ AAA+ V PHT RHSYA H+L G ++ +Q L+GH S+++T++YT Sbjct: 255 FLH-----AAAERCGLGDSVGPHTLRHSYATHLLQGGADIRAVQELLGHASVTTTQIYTA 309 Query: 240 VFALDVAARHRVQFAMP 256 V ++ + Sbjct: 310 VSIDNLREVYATSHPRA 326 >UniRef50_A1VDD4 Tyrosine recombinase XerD subunit n=12 Tax=Desulfovibrionales RepID=A1VDD4_DESVV Length = 321 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 86/256 (33%), Gaps = 33/256 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + + A ++ AL L + + LP L E++ +L Sbjct: 90 RTLARHLATLRGFFAFAVGEGELEADPALFL-ENPKLARNLPDVLTRDEMATILARPDLS 148 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + +L ++ G R++E AL DF V Sbjct: 149 DRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRV------------------- 189 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+ + + + + ++ + V + Sbjct: 190 FGKGAKERIVPVH-HVSCALVTAYLRDWRP--AFSPVEPAMFLNRSGKGLSRQAVWKVVK 246 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 VA A ++PHTFRHS+A H+L G L+ +Q L+GH IS+TE+YT V A Sbjct: 247 RHVAEAG-----IHKDISPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQA 301 Query: 243 LDVAARHRVQFAMPES 258 + H Sbjct: 302 DRLRRIHNAHHPRTRR 317 >UniRef50_D2RKG6 Tyrosine recombinase XerD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKG6_ACIFE Length = 301 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 91/254 (35%), Gaps = 32/254 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 ++ + A+ + + + ++ + + LPK + EV L Sbjct: 74 SASRKLAALKAFFRFMTAEGFLE-EDPSEVVEAGTRGVVLPKVMSLEEVKQLFSAPDLTQ 132 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + +L ++ TG R++E L+L R +L Y Sbjct: 133 PEGFRDRTMLEVMYATGMRVSELLSLKRASVNLETRYVI-------------------AY 173 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT-GRTEKARIWEVTDRTVRTWIG 182 RL+PL + + L+ +AQ++ + + R +T + I Sbjct: 174 GKGAKERLIPLG-QYAIQYLKKYLAQVRPLFVKNGKDDDSLFLTIRGTGMTRQRFWQIIR 232 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A P+TPH RHS+A HML G L+ +Q L+GH IS+T++YT + Sbjct: 233 AYGVKAG-----LQKPLTPHILRHSFATHMLDNGADLRTVQELLGHADISTTQIYTHLTN 287 Query: 243 LDVAARHRVQFAMP 256 + Sbjct: 288 NRLKKVFDKTHPRA 301 >UniRef50_C1SMY6 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMY6_9BACT Length = 312 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 30/254 (11%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + + S D + + + K + ALL Sbjct: 79 STIERKIACLKSFFAFMQKKNHTD-DNPARMLKFPKKEQKAFKVFNIDSIIALLDAPDKD 137 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + ++ ++ TG R++E + L D V+ Sbjct: 138 KPAGMRDALIQELMYGTGVRVSELVGLNLSDIDFGGMRILVRGKG--------------- 182 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R+VP++D + ++ I +TDR+VR + Sbjct: 183 ----KKERIVPIADMHIEMINDYLDVKMDICNGYLPDNEAIFINKFGSRLTDRSVRRIVE 238 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + A + +PH+FRHSYA H+L G L+ +QSL+GH+S+++T+ YT + Sbjct: 239 KYLKIAG-----LPMDFSPHSFRHSYATHLLEGGADLRTIQSLLGHESLTTTQKYTHLNL 293 Query: 243 LDVAARHRVQFAMP 256 ++ + Sbjct: 294 TELLRVYDATHPFA 307 >UniRef50_C8P0J8 Tyrosine recombinase XerC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0J8_ERYRH Length = 296 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 89/249 (35%), Gaps = 30/249 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL----HY 63 S A + + S + + + ++ LP +L+ E+ LL Sbjct: 67 SSVARKISTLRSFYKFLQINYGLT-DNPFQQIKIKRQGRHLPHFLMYDEIETLLLSCDES 125 Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 V + ++++ ++ G R++E + L D L V Sbjct: 126 VLGVRNQVMIELMYACGLRVSEVVDLQIHDLDLTERSLRVIGKG---------------- 169 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R + +S L + + + + R +T R ++ + Sbjct: 170 ---NKERQLFFYESLVPK-LWSYLNLYRPQFPNVSDTEAVFLNQRGKPLTPRGIQHILEH 225 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A + PH RHS+A H+L G L+V+Q+L+GH+S+S+T++YT V Sbjct: 226 QGKTAGLRM-----KLHPHMLRHSFATHLLDNGASLRVVQTLLGHESLSTTQIYTHVSMQ 280 Query: 244 DVAARHRVQ 252 + + Sbjct: 281 KIKEVYDDA 289 >UniRef50_B3GZ58 Tyrosine recombinase xerC n=39 Tax=Gammaproteobacteria RepID=XERC_ACTP7 Length = 306 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 85/233 (36%), Gaps = 32/233 (13%) Query: 34 AALALRQMSMVHDELPKYLLAPEVSALLHY----VPDLHRKMLLATLWNTGARINEALAL 89 + LPK + A ++ LL DL ++ ++++G R++E L Sbjct: 100 NPAVGIKAPKASKRLPKNIDAEQIGQLLTSDSHEPSDLRDLAMMELMYSSGLRLSELQGL 159 Query: 90 TRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQ 149 GD LA R+ R+VP+ + L +A Sbjct: 160 DLGDMDLAGREV-------------------RLLGKGNKERIVPIGSK-ALEALNRWLAV 199 Query: 150 LKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 + + R ++ R+++ + + + + PH RHS+A Sbjct: 200 RNQ---FKPQDNAVFLNKRGGRLSHRSIQLVMQKWGEKQGLES-----HLHPHKLRHSFA 251 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVA 262 HML A L+ +Q L+GH ++++T++YT + +A + + Sbjct: 252 THMLEASGDLRAVQELLGHSNLATTQIYTHLDFQHLAKIYDAAHPRAKRKKQD 304 >UniRef50_A5EXM2 Tyrosine recombinase XerD n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXM2_DICNV Length = 297 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 30/255 (11%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 H+ A M ++ + + + + LP+ + +V ALL Sbjct: 68 HTSMARMRSSLNRFF-SYQIEQKERTENPMHFLGRTKIRRHLPQTMSESDVEALLSAPDV 126 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + +L L+ G R++E + LT +L Y + Sbjct: 127 QTILGLRDRAMLELLYACGLRVSELVGLTLHQIALDVGYVQI------------------ 168 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 RLVP + LQ + + + + + R ++ + + Sbjct: 169 -LGKGDKERLVPFGE-IAHEWLQRYIQEARPQLLGQKMSDYVFVSQRGAALSRQAFWYRL 226 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 V A D ++PHT RH++A H+L G L+ +Q L+GH +S+T++YT + Sbjct: 227 KVYVCAVGLDSN----KISPHTLRHAFASHLLAHGADLRSIQMLLGHSDLSTTQIYTHIA 282 Query: 242 ALDVAARHRVQFAMP 256 + + Sbjct: 283 DQRLKSLFMKHHPRA 297 >UniRef50_Q2LT92 Tyrosine recombinase xerC n=1 Tax=Syntrophus aciditrophicus SB RepID=XERC_SYNAS Length = 310 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 33/257 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 A + ++ + + I L +P L E+ LL+ Sbjct: 76 TIARKLASLRAFFKYLHQKRKIQ-CNPLEAVSTPRTEKYIPAVLSVDEIFVLLNLPFPED 134 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + +L +++G R++E + D + ++ Sbjct: 135 VFGLRDRAILELFYSSGIRVSELTGINEEDMDFSQGLIRIRGKG---------------- 178 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT---GRTEKARIWEVTDRTVRTW 180 + R+VP+ + + M+ + + T R ++ R+V Sbjct: 179 ---KKERIVPIGQPASEAVQRYMMKKPGSETSGKAVATCPVPLFVNRRQGRLSARSVARI 235 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + V+ + ++PHT RHS+A H++ AG L+ +Q L+GH+S+S+T+ YT V Sbjct: 236 LSKYVSMSG-----LQKQISPHTLRHSFATHLMDAGADLRSIQELLGHESLSTTQKYTAV 290 Query: 241 FALDVAARHRVQFAMPE 257 + A + Sbjct: 291 SVNRLMAVYDRAHPKAR 307 >UniRef50_C6WZV5 Integrase n=2 Tax=Flavobacteriaceae RepID=C6WZV5_FLAB3 Length = 302 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 89/246 (36%), Gaps = 30/246 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + ++ + + + A + L + + LP L +V ++ + Sbjct: 72 RSQARWISSIKAFFKYLAEDEARE-DNPTTLLESPKLGLYLPDTLSFEDVERIIKAINIS 130 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + ++ L+ G R++E + L + + Y V K Sbjct: 131 TDLGRRNQCMIEVLYGCGLRVSELIDLKISNINFKELYLKVDGKGDKS------------ 178 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R VPL+ + + + +R ++ V I Sbjct: 179 -------RFVPLATYTAKLIKEYIQEIRSKYKINKKCEDVLFLNSRGSAMSRVIVFIIIK 231 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 E A + ++PHTFRHS+A H+L G L+ +Q ++GH SI++TE+YT + Sbjct: 232 ELTEKAG-----INKKISPHTFRHSFATHLLQNGADLRYIQEMLGHSSITTTEIYTHLKN 286 Query: 243 LDVAAR 248 ++ Sbjct: 287 EELRDV 292 >UniRef50_Q04F40 Tyrosine recombinase XerC subunit n=5 Tax=Leuconostocaceae RepID=Q04F40_OENOB Length = 307 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 91/254 (35%), Gaps = 31/254 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 A + ++ S + ++ A + + +LP++L EV L D Sbjct: 73 SIARKISSLRSFYHFL-IENSLAKKNPFANIEFRSSNKKLPEFLYPAEVIEYLRAAADPQ 131 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L L+ L+ TG RI E LT + Sbjct: 132 NDQYLRNSALIELLYATGMRIFEITNLTFSQIDFNSQIVDITGKG--------------- 176 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R++P S Q + + K + + + R ++T+ + Sbjct: 177 ----KKQRIIPFGKPALASLKQYLPWREKTMQKFSEKHSYIFINTRGRQLTETGAEYILK 232 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + + + PH RHS+A H+L G ++ +Q L+GH S+S+T++YT + Sbjct: 233 QVSKRS-----KLTANIHPHMLRHSFATHLLNNGADIRTVQELLGHASLSTTQIYTHITT 287 Query: 243 LDVAARHRVQFAMP 256 ++ ++ F Sbjct: 288 ENLQENYKKFFDRA 301 >UniRef50_B1VH11 Integrase/recombinase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VH11_CORU7 Length = 303 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 36/257 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S A ++ AV + + + + A +PK L EV+A+L P+ Sbjct: 74 STRARILAAVRNFHRFLTGEGVTEGDVA-DDVARPGQAASIPKALSIAEVTAILESCPND 132 Query: 67 -------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + + LL L++TGAR++E L L D V+ Sbjct: 133 DAASLIQIRDRALLEMLYSTGARVSELLGLDVDDVDPTEKLIIVRGKGS----------- 181 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R+VP+ D + LQ + +++ ++ + ++ Sbjct: 182 --------KERVVPVGDP-ALDALQHYLVRVRPAFNKKGS-AALFLNRNGGRMGRQSAFN 231 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + A G V+PH+FRHS+A H+L G ++V+Q L+GH ++ +T++YTK Sbjct: 232 MVSSVSEKAGVAG------VSPHSFRHSFATHLLEGGADIRVVQELLGHSNVVTTQIYTK 285 Query: 240 VFALDVAARHRVQFAMP 256 V + Sbjct: 286 VSPDHLREAWSESHPRS 302 >UniRef50_A0L875 Tyrosine recombinase XerD subunit n=2 Tax=Proteobacteria RepID=A0L875_MAGSM Length = 296 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 84/258 (32%), Gaps = 31/258 (12%) Query: 3 GSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH 62 S+ S A + A+ + + I +LP L E ALL+ Sbjct: 64 KSLTPSTVARKLSAMRRLFRHL-VDKGIRSEDPTGGVYRPKPQRKLPNTLSEAETEALLY 122 Query: 63 YVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 + +L ++ TG R++E + LT + V Sbjct: 123 APDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLDEENGFVRVIGKG---------- 172 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R+VP+ + + + + + R R +T Sbjct: 173 ---------NKERIVPMGE-AATEMVIRYRHSARQVLLKGGRCNDLFLSNRGAAMTRHNF 222 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + A P++PH RH++A H+L G L+ +Q ++GH IS+TE+Y Sbjct: 223 WHIVKRYAYEA-----NIMKPLSPHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIY 277 Query: 238 TKVFALDVAARHRVQFAM 255 T V + H Sbjct: 278 THVANARLKKLHDQLHPR 295 >UniRef50_D1R4B2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4B2_9CHLA Length = 304 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 34/252 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + + ++ I+ ++ L + + LP L EV L++ Sbjct: 79 STISRTLVSLKVFFGFLKREGTIEQNPSM-LLESPKLWQLLPDILDIEEVDLLMNQPDNK 137 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + + L+ +G R++E LT R+ Sbjct: 138 TAKGVRDRAIFELLYGSGLRVSEVCTLTIYSID---------------------DQYIRV 176 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+ + + ++ + + + R + ++ I Sbjct: 177 YGKGSKERIVPIGSQ-ALMAVDQYLSLYRWQWD-SEKEQSLFVTLRGKSMDRISIWRSIK 234 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 E A + ++PHT RHS+A H+L G L+V+Q L+GH +ISST+ YT+V + Sbjct: 235 EYAQQAG-----ITKTISPHTLRHSFATHLLNNGADLRVIQDLLGHANISSTDRYTRVSS 289 Query: 243 LDVAARHRVQFA 254 + Sbjct: 290 AHLQEAFHRFHP 301 >UniRef50_Q7ZAJ8 Tyrosine recombinase xerD n=13 Tax=Gammaproteobacteria RepID=XERD_SHEON Length = 300 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 96/254 (37%), Gaps = 31/254 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 + SA ++ ++ I +A + + LP L +V LL Sbjct: 72 RTSSARLLSSLRRFYNYLLQTKQISGD-PMAQIESPKLSRHLPDSLSESQVDRLLAEPNV 130 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + K +L L+ TG R++E + LT SL + Sbjct: 131 DDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVRIIGKGG------------- 177 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 RLVP+ + +++++ + + + + R +T +T I Sbjct: 178 ------KERLVPMGE-MAITEVEHYLTSARHELLGHIQSDVVFPSKRSQMMTRQTFWHRI 230 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + A + ++PHT RH++A H+L G L+V+Q L+GH +S+T++YT V Sbjct: 231 KLYASRAGIET-----ELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVA 285 Query: 242 ALDVAARHRVQFAM 255 + H+ Sbjct: 286 RARLQELHQQHHPR 299 >UniRef50_Q7UQK2 Integrase/recombinase n=1 Tax=Rhodopirellula baltica RepID=Q7UQK2_RHOBA Length = 325 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 87/256 (33%), Gaps = 33/256 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 + + + A+ + + L I L +P L EV A L V Sbjct: 96 ASISRAIVAIRTFFKYLQL-EGITVDNPAELLATQKAWQRMPGVLSPNEVEAFLSAVKKS 154 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + LL L+ TG R +E L D +L KQ Sbjct: 155 DSFWQRDRALLEVLYATGCRASEVCTLRVRDLTLDEKTLRCHGKGDKQ------------ 202 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR--TGRTEKARIWEVTDRTVRTW 180 R+VP+ + +Q + + + + RN + + Sbjct: 203 -------RMVPIGG-RAIRAIQLYLEESRHILADRNPGQIDELFLSRGGKALDRIQLWRL 254 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + A S ++PH+ RHS+A H+L G L+ +Q ++GH SI +T++YT V Sbjct: 255 VKRYAKRAG-----ISDEISPHSLRHSFATHLLAGGADLRQVQEMLGHASIQTTQIYTHV 309 Query: 241 FALDVAARHRVQFAMP 256 + HR Sbjct: 310 EHSRLQRVHRDFHPRA 325 >UniRef50_B8FRH1 Integrase family protein n=3 Tax=Clostridiales RepID=B8FRH1_DESHD Length = 298 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 93/259 (35%), Gaps = 37/259 (14%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + A + A+ + + + + + +LP +L E+ L+ Sbjct: 71 LERKSMARKLSALRAFFKFLCREGILQK-NPIQRIATPKLGRKLPHFLSLEELDRLIRTP 129 Query: 65 P-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 +++L L+ +G R++E L R D V+ Sbjct: 130 DCATLLGARDQVILELLYGSGLRVSELADLNRQDIDAGSSLLRVRGKG------------ 177 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R+VPL+ ++ + + + R +++ + ++ R++R Sbjct: 178 -------NKERIVPLT-NYALEAARQYLE------MREDKQEALLLNYQGTRLSVRSIRR 223 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + A S + PH RHS+A H+L G L+ +Q L+GH +SST++YT Sbjct: 224 ILDGLALEAG-----LSQHLHPHMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTH 278 Query: 240 VFALDVAARHRVQFAMPES 258 + + + + Sbjct: 279 LTKERLREVYEQNHPRAKK 297 >UniRef50_A6KYQ9 Integrase n=60 Tax=Bacteria RepID=A6KYQ9_BACV8 Length = 313 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 31/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A ++ + S + + + L + +LP+ + E+ L+ + Sbjct: 73 RSQARILSGIRSFYRFLIMEDYL-KADPTELLESPQTGFKLPEVMTVEEIDLLIGSIDRS 131 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + +L TL++ G R++E L + + V+ KQ Sbjct: 132 TKEGQRNRAILETLYSCGLRVSELCNLKLSELYFEEGFIKVEGKGSKQ------------ 179 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP+S + +++ + + ++ V I Sbjct: 180 -------RLVPIS-PRAIKEIRLYFTDRNLMKIKPGFEDFVFISNFGKNISRIMVFHIIK 231 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 E A + ++PHTFRHS+A H+L G L+ +Q ++GH+SI +TE+YT + Sbjct: 232 ELAAR-----IGLKKKISPHTFRHSFATHLLEGGANLRAIQCMLGHESIGTTEIYTHIDR 286 Query: 243 LDVAARHRVQFAM 255 + + Sbjct: 287 NMLRSEIIEHHPR 299 >UniRef50_B6BVG8 Tyrosine recombinase XerC n=2 Tax=Betaproteobacteria RepID=B6BVG8_9PROT Length = 295 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 91/266 (34%), Gaps = 37/266 (13%) Query: 2 SGSVIHSQSAVMVPAVYS---AGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVS 58 + + + ++ + S + L + + +LP+ L +V Sbjct: 59 ASGLSGKSLSRILSSWRSCFLFFNKSQLMKY----DPTSGIKAPKSQKKLPQTLSIDQVF 114 Query: 59 ALLHYVP----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEK 114 L++ D + +L +++G R++E + + D V Sbjct: 115 NLINIPQTNFIDTRDRAILEFFYSSGLRLSELVNIHLSDIDTNEQTLKV----------- 163 Query: 115 AARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTD 174 R+VPL + L + Q + + + + ++T Sbjct: 164 --------LGKGNKFRIVPLGRK-AIEALDLWILQ-RNKLNKLVDDEFLFLNQQGKKLTA 213 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 R ++ + + PH RHS+A H+L + L+ +Q L+GH +IS+T Sbjct: 214 RAIQYRLKFWAQK-----NNIPENIHPHLLRHSFASHVLQSSQDLRAVQELLGHSNISTT 268 Query: 235 EVYTKVFALDVAARHRVQFAMPESDA 260 ++YT + ++ + + Sbjct: 269 QIYTHLDFQHLSKIYDQAHPRSKKKI 294 >UniRef50_C0VWG3 Site-specific tyrosine recombinase XerD n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VWG3_9CORY Length = 360 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 94/251 (37%), Gaps = 30/251 (11%) Query: 12 VMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD----- 66 M+ + A + A + LP L E++ L+ Sbjct: 134 RMLSTIRGFHAFARDEGIVADDVAHD-ITPPAMPQHLPDTLSVDEINTLIESQAGDSAVA 192 Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 L K LL L+ TGARI+E L+L D + + Sbjct: 193 LRNKALLELLYGTGARISEVLSLAVDDI----------------TALEETDGILVLTGKG 236 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWE-VTDRTVRTWIGEAV 185 R+VP+ S + + + + + + + R + ++ ++ + +A Sbjct: 237 DKQRIVPVG-SHARQAVDAYLVRGRPQLNK-GKSAALFLNVRGGKAMSRQSAWQVVKQAA 294 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A + ++PHT RHS+A H+L G ++ +Q L+GH S+++T++YT + A + Sbjct: 295 TEAG-----ITKDISPHTLRHSFATHLLEGGADVRSVQELLGHASVTTTQIYTHITADSL 349 Query: 246 AARHRVQFAMP 256 A R Sbjct: 350 RAMWRTAHPRA 360 >UniRef50_D1AIZ1 Integrase family protein n=2 Tax=Fusobacteriaceae RepID=D1AIZ1_SEBTE Length = 307 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 32/257 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL-----LH 62 + A+ + I L M ELP L +++ L + Sbjct: 78 RSINRKISALRTFFAYLK-EQNIVEANKLIYVNMPKFEKELPTVLTKDDINKLRNVIDIS 136 Query: 63 YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 V + ++++ L+++G R +E ++L+ +L V Sbjct: 137 KVTGIRDRLIIEFLYSSGLRSSELVSLSELMINLEEREVRV------------------- 177 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+ S++ + ++ + + +R +T R++R I Sbjct: 178 LGKGNKERVTFFSEN-ARKWYEKYISAKRNEYKNYTPNI-VFVNSRGERITTRSLRRLIA 235 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A + VTPH FRHS+A +L + ++ LQ L+GH SIS+T+VYT V Sbjct: 236 DYAEKAG-----INKEVTPHVFRHSFATTLLNNKVDIRYLQELLGHSSISTTQVYTHVSK 290 Query: 243 LDVAARHRVQFAMPESD 259 + + + + D Sbjct: 291 ALLREIYIKAHPLADED 307 >UniRef50_O26979 Probable tyrosine recombinase xerC-like n=3 Tax=cellular organisms RepID=XERCL_METTH Length = 311 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 43/230 (18%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVP------------DLHRKMLLATLWNTGARI 83 L + LPK L EV +L++ V +++L+ L+++G R+ Sbjct: 111 LEEVKAPKRTKSLPKSLNEDEVKSLINAVEVADDGSVIRRFIKTRDRLILSLLYSSGLRV 170 Query: 84 NEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQL 143 +E ++L D ++ K R + R+ Sbjct: 171 SELVSLRINDIDPDERTIRIRGKGDKDRIVLFDENTRDLLMDYLKRRI------------ 218 Query: 144 QTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 + +T R V+ I A VTPH Sbjct: 219 --------------HESEYLFLNRFGDPLTPRYVQMMIKNYARKAG-----IKKKVTPHI 259 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 RHS+A H+L G+ ++ +Q L+GH ++S+T++YT V + + Sbjct: 260 LRHSFATHLLKNGVDIRAIQQLLGHSNLSTTQIYTSVDMQTLKNVYDRAR 309 >UniRef50_B8FH24 Tyrosine recombinase XerC n=2 Tax=Desulfobacteraceae RepID=B8FH24_DESAA Length = 315 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 87/253 (34%), Gaps = 31/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV--- 64 S A + ++ S + + + +L E ALL + Sbjct: 85 STMARKLSSLRSFYRFLEKRGRV-AVNPAQSVVTPKRKKTVAAHLTVDEAFALLDSILDD 143 Query: 65 --PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + L++TG R++E L G + + V Sbjct: 144 SLAGARDRAMFECLYSTGIRVSELAGLNMGRVNFSGKTLRV------------------- 184 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+ + ++ +L + + +T R++R + Sbjct: 185 LGKGDKERIVPVGAK-ALEHIKAYRDRLAVEGPKNPDPEAVFLNKNGGRLTTRSIRRILE 243 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + V + P++PH RH++A HML G L+ +Q L+GH SIS+T YT V Sbjct: 244 KIVRDMG-----LNRPLSPHGLRHTFATHMLDNGADLRSVQELLGHASISTTGRYTHVSI 298 Query: 243 LDVAARHRVQFAM 255 + A + Sbjct: 299 DRLMAAYDKAHPR 311 >UniRef50_B0VFS7 Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_9BACT Length = 298 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 88/258 (34%), Gaps = 32/258 (12%) Query: 6 IHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP 65 + A A+ S + I + + LPK EV LL Sbjct: 68 CNRSLARKSAALNSFFRYCKRSGFIQN-NPMEKIKRPKYEVPLPKCFTEEEVRTLLSIPD 126 Query: 66 -----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 + K +L TL+++G RI+E + D L V Sbjct: 127 TDSPFGIRNKAILETLYSSGLRISELAGIRLQDIDLKRGLVRVTGKG------------- 173 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 R+VPL S+ + + + ++ R N + + Sbjct: 174 ------NKQRIVPLG-SYAIEAINNYLK-VRPQFMRENSPDLLFLTKSGKAFDTKQLDII 225 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + V + +PH+ RHS+A H+L G L+ +Q L+GH +S+TE YT + Sbjct: 226 LKRY-----FELVAKAKGYSPHSLRHSFATHLLSRGADLRAIQELLGHSLLSTTETYTHI 280 Query: 241 FALDVAARHRVQFAMPES 258 D+ ++ + Sbjct: 281 SLEDIKEAYKKGHPRSKE 298 >UniRef50_D0U5Z8 Tyrosine recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U5Z8_9ACTN Length = 311 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 94/260 (36%), Gaps = 37/260 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A M AV + + + + V +PK L EV+ +L V Sbjct: 69 KSVARMYAAVRMMHRYL-IEERLRPDNPTSGVDGVKVPSGIPKALSEDEVARILASVTGV 127 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + LL L+ TGARI+EA L+ D + R+ Sbjct: 128 DSFALRDRALLEFLYATGARISEACGLSLSDLDMESQLV-------------------RL 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQL------KIPMERRNRRTGRTEKARIWEVTDRT 176 R+VP S + L+ + +R+ +R ++ + Sbjct: 169 FGKGSKERIVPFG-SHAKAALEEWLGAGGRTMLVSEQWAKRDHADAVFLGSRGTRLSRQA 227 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 + + A V+PH RHS A HML G L+++Q L+GH S+S+T+V Sbjct: 228 AWRIVQKFAQIA-----EVGDEVSPHVLRHSCATHMLIHGADLRIVQELLGHASVSTTQV 282 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT+V + ++ Sbjct: 283 YTRVDNEVLFDMYKESHPRA 302 >UniRef50_Q7MQB9 Tyrosine recombinase xerC n=141 Tax=Gammaproteobacteria RepID=XERC_VIBVY Length = 316 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 84/259 (32%), Gaps = 32/259 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S A + ++ S L + LPK L EV+ LL D Sbjct: 80 SSIATRLSSLRSFFDFLILRGILT-ANPAKGVSAPRKKRPLPKNLDVDEVNQLLEVNEDD 138 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + + ++ ++ G R+ E + + D L V K+R A A Sbjct: 139 PLAIRDRAIMELMYGAGLRLAELVDIDVRDVHLRSGEIRVIGKGNKERKVPFAGMAVEWV 198 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R ++ R+V+ + E Sbjct: 199 GKWLKVR----------------------SGLADPSEPALFVSKLGTRISHRSVQKRMAE 236 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A +TPH RHS+A H+L + L+ +Q L+GH++IS+T++YT + Sbjct: 237 WGQKQAVAS-----HITPHKLRHSFATHILESSNNLRAVQELLGHENISTTQIYTHLDFQ 291 Query: 244 DVAARHRVQFAMPESDAVA 262 +A + + Sbjct: 292 HLADVYDQAHPRARKKSSQ 310 >UniRef50_Q0VM16 Tyrosine recombinase xerC n=20 Tax=Proteobacteria RepID=XERC_ALCBS Length = 307 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 33/258 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---- 63 M+ + + + + + + LPK L +VS LL Sbjct: 72 KTIQRMLSTLRTFFRYL-MREGLARDNPAIDIRAPKSGKRLPKALDVDQVSHLLDAGTSN 130 Query: 64 --VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + ++ L+ G R+ E L+L L V Sbjct: 131 SEPLALRDQAIMELLYACGLRLAELLSLNLDSIDLHESQLLVTGKG-------------- 176 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R +P+ + + + Q++ + + + + ++ +V+ + Sbjct: 177 -----NKTRQLPVGKPALTAVRRWL--QVRPMLIKSSDQNALFISKNGRRLSPSSVQQRL 229 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 D + PH RHS+A H+L + L+ +Q L+GH +++T+VYT + Sbjct: 230 KRHALERGLDA-----HLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHLD 284 Query: 242 ALDVAARHRVQFAMPESD 259 +A + + Sbjct: 285 FQHLAQVYDGAHPRAQRR 302 >UniRef50_Q5WFP9 Site-specific tyrosine recombinase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFP9_BACSK Length = 300 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 32/256 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 A + A+ S G+ I + LP +L E+ L +P Sbjct: 71 RKSIARKLSALRSFGKFLMEEGHIS-ENPFLHTHLPKQKTRLPTFLYEEEMEHWLLALPA 129 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + K ++ L+ TG R++E L + V Sbjct: 130 NKPLEKRDKAIIELLYATGMRVSECSMLALDQWDRVSETVRV------------------ 171 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRN-RRTGRTEKARIWEVTDRTVRTW 180 + R VP+ VS +++ + + + + R N + R ++DR++R Sbjct: 172 -FGKGRKERYVPVG-KMAVSAVESYIHEARPKLLRANDPTSHLFLNYRGGALSDRSIRKI 229 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + + AA ++PH RHS+A H+L AG L+ +Q L+GH+S+ +T+VYT V Sbjct: 230 VEKRLDEAA-----MQKKISPHAIRHSFATHLLNAGADLRAVQELLGHQSLKTTQVYTHV 284 Query: 241 FALDVAARHRVQFAMP 256 + A ++ Sbjct: 285 SKERLYAVYKGAHPRA 300 >UniRef50_C1SMP5 Site-specific recombinase XerD n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMP5_9BACT Length = 295 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 90/261 (34%), Gaps = 34/261 (13%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 SG+ I + + + I + ++LP +L EV L+ Sbjct: 61 SGASI-ETVQRRISGISRFYDFL-IMEKIISSNPVGFVSKPSKWEKLPVFLNFDEVEKLI 118 Query: 62 HYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 + +++ T+++TG RI+E + L D + V KQ Sbjct: 119 NSPDMSSGLGYRDRIIFETMYSTGMRISELVGLKVLDMDMHREIMKVTGKGSKQ------ 172 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT 176 R VP+ S ++T + + + ++ Sbjct: 173 -------------RFVPMYGSLAEK-MKTYLDIRHDSLVKERDEGWLFLSRNGKKLDREY 218 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 V I + A V+PHT RHS+A H+L G L+ +Q L+GH +S+TE Sbjct: 219 VWMIIKKYCERAG-----IKKNVSPHTLRHSFATHLLTNGADLRTIQVLLGHVDLSTTER 273 Query: 237 YTKVFALDVAARHRVQFAMPE 257 YT+V + P Sbjct: 274 YTQVTDNKARNT--LLNCHPR 292 >UniRef50_A8VRZ0 Putative helix-turn-helix protein, YlxM/p13 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRZ0_9BACI Length = 303 Score = 233 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 91/257 (35%), Gaps = 33/257 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 A + ++ S + I + +LP +L E+ A+ + Sbjct: 73 RRTVARKLASLRSLWRFLEREGRIQL-NPFLYVTTPKLDKKLPSFLYENEMQAIFDAIDT 131 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 ++ L+ +G R +E L D L V Sbjct: 132 DSLLGARNLAIIELLYASGIRASECTGLKLKDIDLDLSTLLVMGKG-------------- 177 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + R +P+ S+ V L + + + R +TDR +R + Sbjct: 178 -----KKERFLPVG-SFAVEALSLYLDKRTAKFGPHAQSDPLFINYRGGALTDRGLRKIL 231 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + + A + + +TPH RH++A HML G L+ +Q L+GH + +T++YT V Sbjct: 232 AKVIEDA-----SLTSKLTPHVIRHTFATHMLNEGADLRTVQELLGHTDLKATQIYTHVT 286 Query: 242 ALDVAARHRVQFAMPES 258 + +R + P + Sbjct: 287 RDRLRDVYR--HSHPRA 301 >UniRef50_Q4UYY0 Tyrosine recombinase xerC n=153 Tax=Gammaproteobacteria RepID=XERC_XANC8 Length = 322 Score = 233 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 88/255 (34%), Gaps = 35/255 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL----HY 63 + A S L + A + +LP+ L A E L+ Sbjct: 94 KSLQRRLSACRSYYAWL-LKHGRIATSPAAALRAPKAPRKLPQVLDADEAVRLVEVPTDA 152 Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + LL +++G R++E AL D L V KQ Sbjct: 153 PLGLRDRALLELFYSSGLRLSELCALRWRDLDLDSGLVTVLGKGGKQ------------- 199 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RLVP+ S V+ L+ + +T ++ R V+ I + Sbjct: 200 ------RLVPVG-SHAVAALRAWQRDS-----GGSAQTHVFPGRAGGAISQRAVQIRIKQ 247 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 V PH RHS+A H+L + L+ +Q L+GH I++T++YT + Sbjct: 248 LAVRQG-----MFKHVHPHMLRHSFASHILESSGDLRGVQELLGHSDIATTQIYTHLDFQ 302 Query: 244 DVAARHRVQFAMPES 258 +A + + Sbjct: 303 HLAKVYDAAHPRAKR 317 >UniRef50_A6DQI4 Tyrosine recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQI4_9BACT Length = 292 Score = 233 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 92/257 (35%), Gaps = 31/257 (12%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + S + + + + + + + + LP YL PE+ LLH Sbjct: 62 LNDSTISRRLVTLKIFFRFLYQEKIVPKDVG-EHLESARLSRLLPDYLSLPEIERLLHIY 120 Query: 65 PDL-----HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + K ++ L++ G RI+E L F+ + V+ Sbjct: 121 DEAIPLQFRNKFIIELLYSCGLRISELCGLRTDSFNYESGFLRVKGKGS----------- 169 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R VP S + + ++ + ++N +T V Sbjct: 170 --------KERSVPFGTQVA-SMSRQYIKNIRPQLCKKNNPPELIVSNNGRPLTRSRVWQ 220 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 ++ EA A + + PH RHS+A H+L L+++Q L+GH I++TE+YT Sbjct: 221 FLKEAAIKA-----EINKNLHPHVLRHSFASHLLSNNADLRIIQELLGHADIATTEIYTH 275 Query: 240 VFALDVAARHRVQFAMP 256 V + H+ F Sbjct: 276 VEKTRLQNIHQKFFPRA 292 >UniRef50_B3DV17 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV17_METI4 Length = 315 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 30/230 (13%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEA 86 L +++ + LP++L E+ LL K +L L+++G R++E Sbjct: 99 KTNPLDHKELPSIQSRLPQFLTTKEIEKLLQAPFPDTPLGWRDKAILELLYSSGLRVSEL 158 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 ++L + ++ R VP+ L Sbjct: 159 ISLKLE-------------------SYYPEHFQIKVLGKGNKERAVPIG-KCAKEALDKY 198 Query: 147 VAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRH 206 +A+ + + + R R +T +R I D V PH RH Sbjct: 199 IAEGRTKLLAKKTRGEVFLNQRGQPLTRSRIRQLIIHYARLGGID-----KKVYPHLLRH 253 Query: 207 SYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 ++A H++ G L+V+Q L+GH +I++T++YT V + HR Sbjct: 254 TFASHLVENGADLRVIQELLGHANIATTQIYTHVNLKHLKEIHRRCHPRS 303 >UniRef50_C0QVM8 Site-specific recombinase XerD n=3 Tax=Brachyspira RepID=C0QVM8_BRAHW Length = 297 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 34/261 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 A ++ + + + I ++ + LP+ L EV LL Sbjct: 61 RTVARNKVSIVNLYKFLVMENYISK-NPTDNLEVIRLKRVLPESLTDTEVDDLLAVHNEK 119 Query: 63 YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L K + ++++G R++E +L D Y + Sbjct: 120 TDKGLRDKAIFELMYSSGLRVSEICSLKIDDIFFEGKYLKICGKG--------------- 164 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R+VP++D + LQ + ++ M + + + R +++ + + Sbjct: 165 ----KRERIVPIND-RALDILQRYIQTSRVIMVKGKKTSELFLNFRGDKISRVGIWKIVK 219 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 EA+ + + PHT RHS+A H++ G L+ +Q ++GH I++TE+YT V + Sbjct: 220 EAMKKS-----KIEKNIYPHTLRHSFATHLIQHGADLRAVQRMLGHSDITTTEIYTHVDS 274 Query: 243 LDVAAR---HRVQFAMPESDA 260 + + H + Sbjct: 275 AHLKKQIAKHPKHSKHARQNT 295 >UniRef50_D1W8B5 Putative tyrosine recombinase XerD n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W8B5_9BACT Length = 321 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 90/257 (35%), Gaps = 31/257 (12%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL-----LHYVP 65 A ++ V S + L I+ L + + + LP+ L EV + L Sbjct: 77 ARILSGVRSFYRFLVLDGYIE-QDPTELLESPRLGEHLPEVLSTEEVDMIENSIDLSKPE 135 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 K ++ L++ G R++E + L + L + V Sbjct: 136 GQRNKAIIEVLFSCGLRVSELVNLQLSNLYLDEGFIRVTGKG------------------ 177 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAV 185 RLVP+S + +L + + + R +T + + Sbjct: 178 -NKERLVPISPK-AIKELNLWFLDRNLMKIKPGEQDYVFLNRRGAHLTRTMILIMLKRQA 235 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A ++PHT RHS+A +L G L+ +Q ++GH+SI +TE+YT + + Sbjct: 236 QEAG-----IQKTISPHTLRHSFATELLKGGADLRAIQVMLGHESIGTTEIYTHIDTTTL 290 Query: 246 AARHRVQFAMPESDAVA 262 + D Sbjct: 291 REEILLHHPRNAKDRPD 307 >UniRef50_B9YCM7 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM7_9FIRM Length = 304 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 91/254 (35%), Gaps = 37/254 (14%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 + SV H+ + A+ Q + D + LP Y E+ ++ Sbjct: 68 AASVNHA-----ITAIRGFHQFLAF--RFDELDPAEYLEQLQRTQSLPVYCTRDEIEKIM 120 Query: 62 ----HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 H D+ + L+ G R++E ALT L + Sbjct: 121 AQFGHSPKDIRWHAIAELLYGCGLRVSECAALTMNQVDLELGMLRIWGKG---------- 170 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 RLVP+ + ++ V ++ P+ ++ + + T ++ Sbjct: 171 ---------NKERLVPMPKQT-IKIVREYVDTVR-PLYQKKPTSWLFITRLGKKTTTASI 219 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + I A P+TPH RH+YA HML G L+ +Q L+GH I++T++Y Sbjct: 220 ESMIKSVCIQAG-----IQKPITPHKLRHTYATHMLEGGADLRSVQELLGHSDITTTQIY 274 Query: 238 TKVFALDVAARHRV 251 T + + + Sbjct: 275 THIDRSRLRTAYDE 288 >UniRef50_B6YWN8 Probable tyrosine recombinase xerC-like n=9 Tax=Thermococcaceae RepID=XERCL_THEON Length = 282 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 93/249 (37%), Gaps = 37/249 (14%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 + ++V A+ S + Y + V LPK L EV +L +P Sbjct: 61 NKSLNLVVQALRSYFRFEG------YDEEAEKLRPPKVPKSLPKSLTREEVRKILSVIPP 114 Query: 66 -DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPA 124 +++ L+ G R++E L + D V+ Sbjct: 115 TKKRDRLIFLLLYGAGLRVSELCNLKKSDVDFERSLIIVRG------------------G 156 Query: 125 GQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 R+VP+ ++ + ++ + E + R +++ +TV + + Sbjct: 157 KGAKDRVVPIP-AFLLEGIKAYLETRDDDSEYLIVED---RRERKDKLSPKTVWYLLKKY 212 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 A VTPH RHS+A HML G+ ++ +Q L+GH ++S+T++YTKV Sbjct: 213 GDRAGI-------RVTPHMLRHSFATHMLENGVDIRAIQELLGHSNLSTTQIYTKVTVEH 265 Query: 245 VAARHRVQF 253 + Sbjct: 266 LRKAQEKAR 274 >UniRef50_C8WAJ5 Integrase family protein n=2 Tax=Atopobium RepID=C8WAJ5_ATOPD Length = 305 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 94/258 (36%), Gaps = 35/258 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + A+ + I ALAL LP + +V+ LL Sbjct: 73 KTLNRHLSALRGFYKWMQREKLIATDPALAL-SNPRAPRNLPHTMTDSDVNRLLESCDVS 131 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + L L+ TGARI+E L L R+ Sbjct: 132 TAAGLRDRAFLEFLYATGARISEVATLRLEQVDLQNGTV-------------------RL 172 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR----RTGRTEKARIWEVTDRTVR 178 R+VPL +S + L+ + + + +++ + R ++ ++R Sbjct: 173 FGKGSKERIVPLYES-AIEWLKKYLRSSRPTLLLKDKTGRVHSALFISVRGNNMSADSLR 231 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + AA D ++PH RH+YA +L G L+++Q L+GH+S+S+T+VYT Sbjct: 232 KVFSSYLTAAGLDSS-----LSPHAMRHTYATELLGGGADLRIVQELLGHESLSTTQVYT 286 Query: 239 KVFALDVAARHRVQFAMP 256 + + + Sbjct: 287 HLSVDRLKEAAKAAHPRS 304 >UniRef50_C6LGQ0 Tyrosine recombinase XerD n=3 Tax=Clostridiales RepID=C6LGQ0_9FIRM Length = 304 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 88/253 (34%), Gaps = 32/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + + ++ + A+ + V + P+ L E LL+ Sbjct: 78 SSVSRTIASIRAFFHFLVKTKAVT-EDPSDNLKAPHVEKKTPEILTLEETVQLLNQPELD 136 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + K +L L+ TG R++E +++ D ++A Y + Sbjct: 137 SAKGIRDKAMLELLYATGMRVSELISMKLTDVNMAMGYVLCR------------------ 178 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R++P L+ + + + + + ++ + I Sbjct: 179 --DSDKERVIPFGTE-AEKALKRYLEESRSVLLKGKESEFLFVNCSGKSMSRQGFWKIIK 235 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A A + +TPHT RHS+ H++ G L+ +Q +MGH IS+T++Y + Sbjct: 236 FYSAQAG-----ITKDITPHTLRHSFGAHLVQNGADLRAVQEMMGHSDISTTQIYMDMNV 290 Query: 243 LDVAARHRVQFAM 255 V + Sbjct: 291 RRVREIYAKAHPR 303 >UniRef50_C8R2R7 Tyrosine recombinase XerD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2R7_9DELT Length = 356 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 92/254 (36%), Gaps = 33/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 ++ + A+ + + + AL + + LPK L + EV LL Sbjct: 129 RSTSRRISALRAFFRFLQGEQLL-GHDPAALLDLPKIGRALPKVLSSAEVEQLLAPPAPP 187 Query: 63 -YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + L +L L+ TG R++E + L + R Sbjct: 188 ASILALRNHAMLHLLYATGMRVSELVKLPVAAVN--------------------QAGHLR 227 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + RLVP + + + Q + + ++ R R +T + Sbjct: 228 ILGKGSKERLVPFGE-AARQAMAVYITQARPRLLKKRRSDFLFVTGRGTAMTRLRFWQIV 286 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 ++ + ++PH RHS+A H+L G L+ +Q ++GH I++T++YT V Sbjct: 287 RKSARERG-----IAREISPHVLRHSFATHLLEHGADLRAVQVMLGHADIATTQIYTHVD 341 Query: 242 ALDVAARHRVQFAM 255 + A HR Sbjct: 342 TNRLKAIHRKFHPR 355 >UniRef50_D2RA91 Site-specific tyrosine recombinase XerC n=10 Tax=Bifidobacteriaceae RepID=D2RA91_GARVA Length = 322 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 90/271 (33%), Gaps = 42/271 (15%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S S S A V AV I + S + + LP L + +L+ Sbjct: 78 SRSHARSSLARKVVAVRGFFAWCQHVEYISG-NPAEILMTSKIKNMLPSVLDEYQAESLM 136 Query: 62 HYVP----------------DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQL 105 + V L +L L+ TG R+ E +L D + + V Sbjct: 137 NNVDSKANVSTSCPKNQKAVGLRNAAILELLYATGIRVGELTSLNIQDINFSSHTIKVTG 196 Query: 106 ATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTE 165 R+VP Y + + + + R + Sbjct: 197 KG-------------------NKQRVVPFGVPAYKALSAWISKDGREILLRNSVEEAVFL 237 Query: 166 KARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSL 225 R + R VR + + +A ++PH RHS A HML G L+ +Q L Sbjct: 238 GTRGKRIDQRLVRQIVHDEAKSAHV------PDISPHALRHSAATHMLNGGADLREVQEL 291 Query: 226 MGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 +GH S+++T+ YT V + ++ F Sbjct: 292 LGHSSLNTTQRYTHVSIESLKRKYSQAFPRA 322 >UniRef50_Q1G9V2 Tyrosine recombinase xerC n=28 Tax=Lactobacillus RepID=XERC_LACDA Length = 295 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 32/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S + + ++ S + + + Q+ +LP++ EV ++ + D Sbjct: 67 STLSRKLSSLKSFYRFLTR-RGLVKADPTVAIQLRRGKKKLPEFFYQDEVGQVIRSLNDG 125 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + ++A + TG R++E L L V Sbjct: 126 KPLTVRNRAIVALFYATGMRLSELTDLKIKQLDLENGMILVHGKG--------------- 170 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR-TGRTEKARIWEVTDRTVRTWI 181 R V D L+ + + + + ++ R + + Sbjct: 171 ----NKDRYVFF-DQESKKYLEEYLQAARPSLLKNEPDTGAVFLNKLGRPISSRGIAKAV 225 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + A PH RHS+A ML G L+ +Q L+GH+ +S+T++YT V Sbjct: 226 QQIFQKAGLTAG-----AHPHELRHSFATAMLNNGADLRSVQELLGHEDLSTTQIYTHVS 280 Query: 242 ALDVAARHRVQFAM 255 + +R F Sbjct: 281 MQHLTVEYRQHFPR 294 >UniRef50_A8RBK4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RBK4_9FIRM Length = 311 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 99/262 (37%), Gaps = 37/262 (14%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S S+ H M+ +++ + S + + LP Y ++ LL Sbjct: 80 SASINH-----MITSLHVFHRYLS-MTYPKLLNPVQNIRTKKAVQHLPVYFNMQDIERLL 133 Query: 62 HYVPD----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 D + K ++ L+ G R++E +L L + V Sbjct: 134 DSFRDSDAEIMDKAIVELLYGCGLRVSECCSLMLQQVYLEQGFLRVIGKG---------- 183 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R+VP+ + L+ + +++ R R A+ E+T + + Sbjct: 184 ---------NKERMVPMH-ARCKKALENYLTKVRKQ--RYARSNFVFINAKGQEITRQYI 231 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 I + + A D ++ H+FRHS+A H+L G L+V+Q L+GH IS+T++Y Sbjct: 232 HVMIKKRLLALGLD-----ERLSAHSFRHSFASHLLDGGADLRVVQELLGHSDISTTQIY 286 Query: 238 TKVFALDVAARHRVQFAMPESD 259 T V + + + + Sbjct: 287 THVQNKRLQSVYTSFHPRAKKH 308 >UniRef50_D1N7Z4 Integrase family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7Z4_9BACT Length = 314 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 84/270 (31%), Gaps = 47/270 (17%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL------- 60 + A+ S + + LP + ++ L Sbjct: 70 RSIQRKLSALRSFFRYMMRMELL-GDNPFLKLPPIKADQPLPLVMSINQIDLLTKAVGEY 128 Query: 61 --LHYVPDL------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLA 106 + + ++ +++ G RI+E L GD L V+ Sbjct: 129 WEMAAANGISKSDEAAEFAAARDLAMVEVIYSGGLRISETTGLDMGDIDLIGGIARVRGK 188 Query: 107 TLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEK 166 + R+ L L+ R + Sbjct: 189 G-------------------KKERIAVLGRPS-QKALRNYFKLRSTVGGGRAPGSPVFLN 228 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLM 226 +T R+ + + + AA +TPH RHS+A H+L AG L+ +Q ++ Sbjct: 229 KFGKRLTPRSFQRNLKNYLIAA-----NLPPDLTPHKLRHSFATHLLDAGADLRSVQEML 283 Query: 227 GHKSISSTEVYTKVFALDVAARHRVQFAMP 256 GH+++S+T++YT V A + ++ Sbjct: 284 GHENLSTTQIYTHVSAERMKEVYKEAHPRA 313 >UniRef50_C2D6I8 Tyrosine recombinase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6I8_9ACTN Length = 342 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 87/261 (33%), Gaps = 38/261 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + A+ + + + + + A + LP L + LL Sbjct: 108 RTINRHLSAIRAWYKWL-VRKGLTKKDSAAALASPKIPKTLPHVLSESSIEKLLATCQED 166 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + LL L+ TG RI+EA L D S R+ Sbjct: 167 TVCGLRDRALLELLYATGCRISEAAHLCVSDISFDSKQV-------------------RL 207 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG-------RTEKARIWEVTDR 175 R+VP+ L + + + + + R ++D+ Sbjct: 208 FGKGSKERIVPIYPECA-RILHMYLTTARPVLLSKQKNQAQAQTNQHVFISTRGKAMSDQ 266 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 +R + + + TPHT RHS+A +L G L+ +Q L+GH S+++T+ Sbjct: 267 ALRYVFEHYMRLSHLQEI-----ATPHTMRHSFATELLSHGADLRSVQELLGHASLATTQ 321 Query: 236 VYTKVFALDVAARHRVQFAMP 256 +YT V + R Sbjct: 322 IYTHVSVNALKDAARRANPRA 342 >UniRef50_C9RQE0 Integrase family protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQE0_FIBSS Length = 297 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 89/251 (35%), Gaps = 34/251 (13%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 A ++ + + DY ++ + LP+YL E+ ++ + Sbjct: 72 SVARHFSSLRGFLKYMQIQGEYDYSTE-SMLATPKLGHYLPQYLTREEIDSVFESAANGK 130 Query: 67 --LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPA 124 L L+ +++ G RI+EAL + L + Sbjct: 131 NPLRDTALIELMYSGGLRISEALGIKLSQIDLENEWLM-------------------PIG 171 Query: 125 GQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 RLVPL L+ + + + A ++ + Sbjct: 172 KGNKQRLVPLGSK-AKENLRAWIEEGRP--LTHPTTDNIILNAHGKPMSRMGAWKIVQ-- 226 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 + S V+PHTFRHS+A H L AG+ L+VLQ L+GH IS+T++YT V Sbjct: 227 -----LHTMHLSKQVSPHTFRHSFATHCLEAGMDLRVLQELLGHADISTTQIYTHVDKDF 281 Query: 245 VAARHRVQFAM 255 + HR Sbjct: 282 IKQEHRSFHPR 292 >UniRef50_C5AC95 Tyrosine recombinase XerD n=82 Tax=cellular organisms RepID=C5AC95_BURGB Length = 341 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 31/252 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 S + A L L + P L +V ALL Sbjct: 115 SSNRRLSVFRRYYGWALREHRAALDPTLRLL-SAKQPARFPATLSEAQVEALLAAPEVGT 173 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + +L ++ +G R++E + L + L V Sbjct: 174 ALGLRDRTMLELMYASGLRVSELVMLKTVEVGLNDGVVRVMGKGS--------------- 218 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RLVP + ++ + + + + AR +T + I Sbjct: 219 ----KERLVPFGE-VAHGWIERYLREARPALLGARTSDALFVTARGEGMTRQQFWNIIKR 273 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A ++PHT RH++A H+L G L+V+Q L+GH IS+T++YT V Sbjct: 274 HAMRA-----EIRAHLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARE 328 Query: 244 DVAARHRVQFAM 255 + H Sbjct: 329 RLRTLHAAHHPR 340 >UniRef50_B3E1H7 Tyrosine recombinase xerC n=8 Tax=Desulfuromonadales RepID=XERC_GEOLS Length = 317 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 84/259 (32%), Gaps = 38/259 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S + AV + ++ L LP +L + L+ Sbjct: 80 SSIGRKLAAVRAFFGWLVRTRQLE-VNPAELIATPKREQRLPFHLNIDQTVTLIEAPGHT 138 Query: 68 --------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 +L L+++G R++E L D A VQ Sbjct: 139 GQEQPTFARDTAILELLYSSGLRVSELTGLAVADLDRAAGMVRVQGKGG----------- 187 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R+VP+ S + L+ +A + R + RTV Sbjct: 188 --------KERIVPVG-SAALEALEQYLAGR----GQLADDAPLFLGCRGARINRRTVAQ 234 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + G+ ++PHT RH++A HML G L+ +Q L+GH S+S+T+ YT Sbjct: 235 LVKRWA-----SGIPAFRSISPHTLRHTFATHMLEGGADLRSIQELLGHSSLSTTQKYTH 289 Query: 240 VFALDVAARHRVQFAMPES 258 V + + Sbjct: 290 VGLDRLLEVYDKAHPRARE 308 >UniRef50_Q49890 Tyrosine recombinase xerD n=54 Tax=Actinobacteria (class) RepID=XERD_MYCLE Length = 316 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 99/256 (38%), Gaps = 39/256 (15%) Query: 14 VPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD------- 66 + AV + A +D A A + LPK L EV ALL V Sbjct: 86 LIAVRGLHRFAVAEGLVDLDVARA-VRPPTPGRRLPKSLTVDEVLALLESVGGESRADGP 144 Query: 67 --LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPA 124 L + LL L++TG+RI+EA+ L D +Q KQ Sbjct: 145 LVLRNRALLELLYSTGSRISEAVGLDVDDVDTQARTVLLQGKGGKQ-------------- 190 Query: 125 GQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR----TGRTEKARIWEVTDRTVRTW 180 RLVP+ V L + + + + RR AR ++ ++ Sbjct: 191 -----RLVPVGRP-AVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGRLSRQSAWQV 244 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + +A A + V+PH RHS+A H+L G ++V+Q LMGH S+++T++YT V Sbjct: 245 LQDAAEHAG-----ITSGVSPHMLRHSFATHLLEGGADIRVVQELMGHASVTTTQIYTLV 299 Query: 241 FALDVAARHRVQFAMP 256 + Sbjct: 300 TVQALREVWAGAHPRA 315 >UniRef50_Q2IIH9 Tyrosine recombinase XerD subunit n=11 Tax=Deltaproteobacteria RepID=Q2IIH9_ANADE Length = 314 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 31/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + A+ S + + + + LP L EV LL Sbjct: 87 RSQARALSAIRSLHRLLAA-ERVTSADPSDEIESPRPGRRLPGLLSHDEVDRLLAAPDVR 145 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + +L L+ TG R++E ++L D +L + Sbjct: 146 SAAGIRDRAMLELLYATGLRVSELVSLQLNDVNLETRVLVARGKGD-------------- 191 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VP+ ++ +A + + R R +T + + Sbjct: 192 -----KERIVPVGAPAA-DAVKAYLAVARERLLHGRRSKDLFVTPRGGRMTRQGFAKILD 245 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A +PH RHS+A H+L G L+ +Q ++GH +S+T++YT V Sbjct: 246 RCARRAGIRRRI-----SPHKLRHSFATHLLEGGADLRAVQEMLGHADVSTTQIYTHVDR 300 Query: 243 LDVAARHRVQFAMP 256 V + Sbjct: 301 THVKRLYDRFHPRA 314 >UniRef50_D0SK93 Tyrosine recombinase XerC n=1 Tax=Acinetobacter junii SH205 RepID=D0SK93_ACIJU Length = 311 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 83/261 (31%), Gaps = 35/261 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S + ++ + A + ++ LP + V +L P Sbjct: 77 SSLQRHLTSIRQFMKWAEQGQYLQ-QNPSEDFKLKRQPRPLPGMVDIETVHQILDQAPPD 135 Query: 67 --------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 L K +L L+++G R+ E L D + Sbjct: 136 KPIEQQLWLRDKAILELLYSSGLRLAELQGLMIKDIDFNRQLLRITGKG----------- 184 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVR 178 R+VP L + +I N + R +T R + Sbjct: 185 --------NKTRIVPFGQK-AKDSLIEWLKIYRIWQGEFNLDSAVFISQRGNRLTPRQIE 235 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + A + + PH RH +A HML A L+ +Q ++GH ++S+T++YT Sbjct: 236 NRVKLQAQRAGVNV-----DLHPHLLRHCFASHMLSASGDLRSVQEMLGHSNLSTTQIYT 290 Query: 239 KVFALDVAARHRVQFAMPESD 259 V +A + + D Sbjct: 291 HVDFDQLARVYDQTHPRAQKD 311 >UniRef50_Q3IDS2 Site-specific recombinase n=3 Tax=Alteromonadales RepID=Q3IDS2_PSEHT Length = 315 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 31/257 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S + ++Y + ++ Y + LPK L +++ LL D Sbjct: 85 SLKLSCIRSLYKFLKAKNIAKQAHYHNPAVGIKGPKFAKPLPKNLDVDQMARLLEIPDDE 144 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + K ++ ++++G RI+E + D S A V+ Sbjct: 145 PLAIRDKAMMELMYSSGLRISELVGANLQDISAANGEILVRGKG---------------- 188 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RL+P+ + + ++ + P ++ ++ R VR + E Sbjct: 189 ---NKERLIPVGSKALNALKKWLIIR---PQFANPDEVAVFLSSKKNRISVRQVRLRMQE 242 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 S V PH RHS+A H+L + L+ +Q L+GH S+S+T+VYT + Sbjct: 243 WGIKQG-----ISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQ 297 Query: 244 DVAARHRVQFAMPESDA 260 +A + + Sbjct: 298 HLAKVYDNTHPRAKKRT 314 >UniRef50_Q1MRT1 Site-specific recombinase n=3 Tax=Desulfovibrionaceae RepID=Q1MRT1_LAWIP Length = 306 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 87/254 (34%), Gaps = 33/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + ++ + + L + LP L E+ LL Sbjct: 72 RTLARRLSSIRNFFHWCVEEDIL-LSNPALLIDGPKLPSLLPNILSQDEMLRLLTTPDIT 130 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 K++L L+ +G R++E + + DF V Sbjct: 131 NKLGFRDKVILELLYASGIRVSELIGVHVLDFDQDKGIIKVFGKGG-------------- 176 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R +PL S + L V +++ +T + + I Sbjct: 177 -----KERYIPLHSS-AMKLLIHYVQKIRP--MFTPIEKFLFLNRSGKGLTRQAIWKIIK 228 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A + + ++PHTFRH++A H+L G L+ +Q L+GH +S+TE+YT V + Sbjct: 229 RYALLA-----SINKSISPHTFRHTFATHLLEGGADLRSVQLLLGHVDMSATELYTHVQS 283 Query: 243 LDVAARHRVQFAMP 256 + H + Sbjct: 284 DRLKYIHSMFHPRS 297 >UniRef50_B9YZP4 Tyrosine recombinase XerC n=3 Tax=Proteobacteria RepID=B9YZP4_9NEIS Length = 323 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 81/258 (31%), Gaps = 36/258 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A M+ A + + LPK L SALL D Sbjct: 86 RSLARMLSAWRGFFDWLIEQEKL-PANPCHGIRPPKSPKTLPKALPVDATSALLDAPIDP 144 Query: 67 -----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L + + L++ G R++E L D L Sbjct: 145 EDDLALRDQAMFELLYSCGLRLSELTGLDLADLDLGEGLLTAHGKG-------------- 190 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R++P+ L+ +A ++ R V + Sbjct: 191 -----NKTRILPIGRQ-ARQALERWLAIRPSQ----PGEGAVFTGKSGRRLSGRQVEKRL 240 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + +D V PH RHS+A H+L + L+ +Q L+GH ++S+T++YT + Sbjct: 241 EQWAQRHGSD-----RHVHPHMLRHSFASHLLQSSGDLRAVQELLGHANLSTTQIYTSLD 295 Query: 242 ALDVAARHRVQFAMPESD 259 +A + + D Sbjct: 296 FQHLAKVYDATHPRAKLD 313 >UniRef50_B2UMQ9 Tyrosine recombinase XerC n=4 Tax=Verrucomicrobia RepID=B2UMQ9_AKKM8 Length = 300 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 92/254 (36%), Gaps = 43/254 (16%) Query: 15 PAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL------- 67 A+ S + ++ + + LP +L ++ LL Sbjct: 78 AALRSFYRFMMRRHGLE-TNPMTGVSLPRRKKTLPVFLTLNQMLELLELPYKTAVPANAP 136 Query: 68 -----HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 +L ++ G R++E + L G V Sbjct: 137 AWLPYRDAAILELFYSCGMRLSELVGLDVGSVDHRFRGVKVMGKG--------------- 181 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R++P+ ++ L+T V+ M + + ++ R+V+ + Sbjct: 182 ----RKERILPVGTP-ALAALETYVS-----MACLPKNSPLFVSRIGTRLSARSVQMMLN 231 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + V + + ++PH RH++A H+L AG L+ +Q L+GH S+S+T++YT V Sbjct: 232 KYVKLS-----SIPFTISPHKIRHTFATHILEAGADLRSVQELLGHASLSTTQIYTHVTR 286 Query: 243 LDVAARHRVQFAMP 256 +A +R Sbjct: 287 ARMAEVYRQAHPRA 300 >UniRef50_B1ZW75 Integrase family protein n=2 Tax=Verrucomicrobia RepID=B1ZW75_OPITP Length = 324 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 87/262 (33%), Gaps = 41/262 (15%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 V + S + + + + LPK+L ++ LL Sbjct: 92 RRTLHNHVSGLRSFFKFWLRRGKVQR-NPFLGVPLPKLEKRLPKFLTEEQMVRLLAGPQQ 150 Query: 67 L------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEK 114 L +++L L+ G R++E L G L + Sbjct: 151 LLASESIDAFTAHRDRLVLELLYGAGLRVSELTGLNYGAIDLEAGVARIVGKG------- 203 Query: 115 AARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTD 174 + RL P+ V+ L+ + R ++ Sbjct: 204 ------------RKERLCPIGR-VAVAVLRKFRDEFAPATA---PDAPVIVTQRGTRMSP 247 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 R V+ + +A A + +TPH RHSYA H+L AG L+++Q L+GH +++T Sbjct: 248 REVQLMLKRYLALA-----ELPMDLTPHKLRHSYATHLLNAGADLRLVQELLGHAQLATT 302 Query: 235 EVYTKVFALDVAARHRVQFAMP 256 +VYT V + + Sbjct: 303 QVYTHVSVARLKEIYAKAHPRA 324 >UniRef50_A6DTG9 Integrase/recombinase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTG9_9BACT Length = 318 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 85/265 (32%), Gaps = 40/265 (15%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL- 67 ++ S + + + LP L ++S LL Sbjct: 79 TLLRKCSSLRSLYNFFQREE-LQSTNPFQDIKAAKKDKSLPLILSREDISTLLSSPAPYW 137 Query: 68 -------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEK 114 +L +++ G RI EAL + +L + Sbjct: 138 AQKKGKNNDFMASRDAAILEIIYSGGLRIQEALDINFDQINLEESTLKI----------- 186 Query: 115 AARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKAR-IWEVT 173 + R L + + Q + + + + + ++ Sbjct: 187 --------FGKGKKQRTAYLGNPAKQALEQYFACRKNAELNWTSANDPVFINLKDLKRLS 238 Query: 174 DRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISS 233 R+++ + A +TPH RHS+A H+L AG L+ +Q L+GH+++S+ Sbjct: 239 ARSIQRNLK-----AYLQSCQLPPDITPHKLRHSFATHLLDAGADLRSVQELLGHENLST 293 Query: 234 TEVYTKVFALDVAARHRVQFAMPES 258 T++YT + + + +S Sbjct: 294 TQIYTHISTDRLLQAYDQAHPHAQS 318 >UniRef50_D1N8W9 Tyrosine recombinase XerD n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N8W9_9BACT Length = 299 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 86/232 (37%), Gaps = 33/232 (14%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-------DLHRKMLLATLWNTGARIN 84 A+ + LP +L EV A L P ++ + +L L+++G R++ Sbjct: 92 KKDVTAVMDSPKLWRILPDFLSEAEVDAFLKAFPASVKEPFEMRNRAILEVLYSSGLRVS 151 Query: 85 EALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQ 144 E L V R+VP+ + L+ Sbjct: 152 ELARLPLTAVDFDNELLRVVGKGS-------------------KTRIVPIG-KVALRTLR 191 Query: 145 TMVAQLKIPMERRNRR-TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHT 203 +A ++ + +N R + + + A A A + PHT Sbjct: 192 RYLADVRPLLAEKNPRSPYVFLSKSGRPLNREWIWNVVKVAAARAG-----IHKNIHPHT 246 Query: 204 FRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAM 255 RHS+A H+L G L+V+Q ++GH IS+TE+YT + + +AA H Sbjct: 247 LRHSFASHLLAHGADLRVIQEMLGHADISTTEIYTHIDSNRLAAIHHKFHPR 298 >UniRef50_C8WWD9 Integrase family protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWD9_ALIAD Length = 307 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 99/267 (37%), Gaps = 35/267 (13%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 ++ S A + + + + + + ++ LP+YL EV+AL Sbjct: 63 LAKGAAKSSVARRLSCLRTFLRFCAERGWV-RQVMAKNVRLPKRDRRLPRYLHEEEVAAL 121 Query: 61 LHYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 + +V L + LL L+ TG R++E + L GD L+ + V + Sbjct: 122 IDHVGGDDFVALRDRALLEFLYATGVRVSECVHLDIGDLDLSAGFARVLGKGGR------ 175 Query: 116 ARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDR 175 R V + V L+ + +R R + R +TDR Sbjct: 176 -------------ERYVMVGR-RAVDALRRYL----PLRDRMARCSAVFINRRGGRLTDR 217 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 +VR + + V + H RHS+A HML G L+ +Q L+GH S+SST+ Sbjct: 218 SVRRVLERRIQE-----VPGLRSIHVHGLRHSFATHMLNGGADLRSVQELLGHASLSSTQ 272 Query: 236 VYTKVFALDVAARHRVQFAMPESDAVA 262 +YT +A + Sbjct: 273 IYTHTSREQLARAYYAAHPRARRGTQG 299 >UniRef50_C7LWB1 Integrase family protein n=2 Tax=Desulfovibrionales RepID=C7LWB1_DESBD Length = 312 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 92/256 (35%), Gaps = 36/256 (14%) Query: 8 SQSAVMVPAVYSAGQP--ASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY-- 63 S + A+ + + V D AALA ++ VH PK L + L+ Sbjct: 77 SSVCRKLSALRAFYRFLRQRKMVVEDPCAALANPKLPKVH---PKVLNVDQAIHLVETEI 133 Query: 64 ---VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 L LL L+ +G R++EAL L L V Sbjct: 134 TLDPEGLRDLALLEVLYGSGLRVSEALGLDFAHVDLDQKLVRV----------------- 176 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 + RLVPL+ + + + + R R ++ + Sbjct: 177 --LGKGRKERLVPLTGPAAERLARYI--EQRGAFAPAAREQAVFLGKRGGRLSRKQADRI 232 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + E + A ++PHT RHS+A HML AG L+ +Q L+GH IS+T+ YT + Sbjct: 233 VKEMAVRSGAPCS-----ISPHTLRHSFASHMLQAGADLRSVQELLGHSRISTTQRYTHL 287 Query: 241 FALDVAARHRVQFAMP 256 V + + Sbjct: 288 DLAQVMRVYDAAHPLA 303 >UniRef50_D2RA84 Tyrosine recombinase XerD n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA84_GARVA Length = 319 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 97/259 (37%), Gaps = 36/259 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A + +++ + L A + D LP L EV+ ++ + Sbjct: 86 RTVARRLASIHEWHRFM-LAHGDIQADVSAQVKAPKQADYLPDVLSIEEVNRVIEAAGNF 144 Query: 67 -------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + LL L+ TGARI+EA+ + D L Sbjct: 145 GSSDAISIRDTALLEFLYATGARISEAVGVKFEDIDLNESVV------------------ 186 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT--GRTEKARIWEVTDRTV 177 ++ RLVP+ V L+ + + + + + +R R ++ ++ Sbjct: 187 -KLTGKGSKQRLVPIGG-CAVRALRNYMEKSRPELALKGKRELHTIFLNKRGSALSRQSA 244 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + +A A D P+ PHT RHS A H++ G ++ +Q L+GH S+++T++Y Sbjct: 245 WEIVTQAGERAKLD-----KPLHPHTLRHSLATHLIAGGADVRTVQELLGHASVTTTQIY 299 Query: 238 TKVFALDVAARHRVQFAMP 256 T + + + + Sbjct: 300 THISPDALVEAYVMSHPRA 318 >UniRef50_A6U170 Tyrosine recombinase xerC n=66 Tax=Staphylococcaceae RepID=XERC_STAA2 Length = 298 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 93/265 (35%), Gaps = 37/265 (13%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYP--AALALRQMSMVHDELPKYLLAPEVSA 59 S + + + + + + + + +D LP++ E+ A Sbjct: 61 SNHLKRTSVSRKISTLRTFYEYW---MTLDENIINPFVQLVHPKKEKYLPQFFYEEEMEA 117 Query: 60 LLHYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEK 114 L V +L +++L L+ TG R++E + + + D V Sbjct: 118 LFKTVEEDTSKNLRDRVILELLYATGIRVSELVNIKKQDIDFYANGVTVLGKGS------ 171 Query: 115 AARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTD 174 R VP ++ ++ + K + + +T+ Sbjct: 172 -------------KERFVPFG-AYCRQSIENYLEHFKP--IQSCNHDFLILNMKGEAITE 215 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 R VR + + V A + PH RH++A H+L G L+ +QSL+GH ++S+T Sbjct: 216 RGVRYVLNDIVKRTAGVS-----EIHPHKLRHTFATHLLNQGADLRTVQSLLGHVNLSTT 270 Query: 235 EVYTKVFALDVAARHRVQFAMPESD 259 YT V + + + + Sbjct: 271 GKYTHVSNQQLRKVYLNAHPRAKKE 295 >UniRef50_B3PEI6 Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEI6_CELJU Length = 313 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 32/255 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 + ++ Q A + +LPK L + + + D Sbjct: 75 KSLQRWLSSLRGFFQYAIRHHWMSI-NPADGIAAPKTPKKLPKTLDVDQTAQFVAVEGDD 133 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + LL ++++G R+ E +L GD V Sbjct: 134 FIHKRDRALLELIYSSGLRLAEVTSLNLGDIDWGDAMVTVTGKGS--------------- 178 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R +P+ S ++ L+ ++Q + R ++ R V+ + + Sbjct: 179 ----KTRTLPVG-SVAIAALKDWLSQREQYAPASEP--ALFITQRGKRISHRAVQLRLQQ 231 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 D PV PH RHS+A HML + L+++Q L+GH +IS+T++YT + Sbjct: 232 LSVQQGMDN-----PVHPHMLRHSFASHMLESSGDLRLVQELLGHANISTTQIYTHLDFQ 286 Query: 244 DVAARHRVQFAMPES 258 +A + Sbjct: 287 HLAKVYDKAHPRAGR 301 >UniRef50_D0U650 Site-specific recombinase XerD n=1 Tax=uncultured actinobacterium RepID=D0U650_9ACTN Length = 308 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 100/260 (38%), Gaps = 35/260 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 + + + S + Y LPK L ++ +++ Sbjct: 72 ASINRVDSTLRSFFKHLQQEYG--YADPTLEIAPQKSARRLPKALTISQIVSMIDVAYRE 129 Query: 63 -YVPDLHRKMLLATLWNTGARINEALALTRGD---FSLAPPYPFVQLATLKQRTEKAART 118 + +L L+++GAR++E + + D + Sbjct: 130 GQPITARDQAMLELLYSSGARVSELIGINLNDLSSIDTSDGKVT---------------- 173 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR--TGRTEKARIWEVTDRT 176 ++ R+VPL S+ ++ + +++ + ++ + + +R ++ ++ Sbjct: 174 TLKLRGKGAKERIVPLG-SFATKAVENYLVRVRPDLASKSSKVTSALFLNSRGSRISRQS 232 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 + +A AA + V+PH FRHSYA H+L G ++V+Q L+GH S+++T++ Sbjct: 233 AWQMVLDAADAAG-----ITEHVSPHVFRHSYATHLLNGGADIRVVQELLGHASVTTTQI 287 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT + V + + Sbjct: 288 YTLITIDKVRESYALTHPRA 307 >UniRef50_D0WF42 Tyrosine recombinase XerD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WF42_9ACTN Length = 315 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 86/257 (33%), Gaps = 33/257 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---- 63 + V A+ + + + V LP L +V+ LL Sbjct: 84 ASIERHVSALKGFHAFL-VRDGLVASDPACALPLPGVPARLPDVLSIDQVNTLLDQEFRE 142 Query: 64 -VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + L L+ G R +E L GD L + Sbjct: 143 GPLGVRNACALELLYGCGLRASELSGLDAGDAFLDEGILRIVGKGS-------------- 188 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-RTGRTEKARIWEVTDRTVRTWI 181 R+VP+ S L + + + + R AR ++ +++ + + Sbjct: 189 -----RERIVPIGGSAA-RCLASYLEDARPLLRSPRRLTPAVMLNARGGRLSRQSIHSIV 242 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 EA + PHT RHS+A H+L G L+ +Q ++GH IS+T++YT V Sbjct: 243 REAGHVIGI------KDLHPHTLRHSFATHLLEGGADLRAIQEMLGHSDISTTQIYTHVD 296 Query: 242 ALDVAARHRVQFAMPES 258 V + ++ Sbjct: 297 RTHVREEYLSAHPRAKA 313 >UniRef50_B0MY63 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY63_9BACT Length = 298 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 91/243 (37%), Gaps = 34/243 (13%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP----- 65 A + + S L ID LP L E+ ++ V Sbjct: 78 ARALSGIRSFYNYLMLTDVID-STPTQFIDTPKFGRHLPDILTVEEIDRIVAAVDTSTVK 136 Query: 66 DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAG 125 +L L++ G R++E +L GD Y V KQ Sbjct: 137 GRRDSAMLEVLYSCGLRVSELTSLRLGDLFFGEGYIRVTGKGDKQ--------------- 181 Query: 126 QQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAV 185 RLVP+S ++Q + + + R ++T V T + EAV Sbjct: 182 ----RLVPVSG-AAREKIQRYLDDR---ATKTSASDVVFLNNRGTQLTRVMVFTILREAV 233 Query: 186 AAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDV 245 A D ++PHTFRHS+A H+L G ++ +Q ++GH+SI +TE+YT + + Sbjct: 234 HRAGID-----KHISPHTFRHSFATHLLEGGASIRQVQEMLGHESILTTEIYTHLEGDHL 288 Query: 246 AAR 248 Sbjct: 289 RDT 291 >UniRef50_A4G2A1 Tyrosine recombinase XerD n=3 Tax=Proteobacteria RepID=A4G2A1_HERAR Length = 309 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 96/252 (38%), Gaps = 31/252 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 S + + Q A I L + + + +PK L +V ALL Sbjct: 83 SSNRRLAVLKRFYQLALRQNRISDDPCLKM-RSAKQPLRIPKTLSEAQVEALLAAPDVTT 141 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + +L ++ +G R+ E + L + + + Sbjct: 142 PLGLRDRTMLELMYASGLRVTELVLLKSIEVGMNEGVLRITGKGG--------------- 186 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 RLVP + V ++ + + + + AR +T + T I + Sbjct: 187 ----KTRLVPFGEEARV-WIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWTLIKK 241 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 AAA + P++PHT RH++A H+L G L+V+Q L+GH IS+T++YT V Sbjct: 242 HAAAA-----EINAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARE 296 Query: 244 DVAARHRVQFAM 255 + H++ Sbjct: 297 RLKHLHQIHHPR 308 >UniRef50_B3QW74 Integrase family protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW74_CHLT3 Length = 336 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 86/287 (29%), Gaps = 57/287 (19%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 + + +V S + + + A LP +L + L Sbjct: 76 LDAGYQSKSIGRKLASVKSFFKFLVYINHL-PASPAANVTTPKAKKTLPTFLNETQTQTL 134 Query: 61 LHYVPDL---------------------------HRKMLLATLWNTGARINEALALTRGD 93 + D + +L ++ G R+ E + L + Sbjct: 135 FDEILDHFNEAFYHDNRAKKHEKVNTLEWDFRYNRDRAILEMFYSCGLRLAELIGLNIME 194 Query: 94 FSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIP 153 + V + R++PL +S L+ + K Sbjct: 195 LDFQNGFVKV-------------------LGKGRKQRIIPLGES-AQKTLKNYLEIKKKF 234 Query: 154 MERRNR----RTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 E + R + V V+ + + VT +PH RH++A Sbjct: 235 FEMKRSNVLEREAVFVTEKGKRVYPVLVQRLVKKY-----LSPVTEQKKKSPHVLRHTFA 289 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 H+L G L+ + ++GH ++S+TE+YT + + ++ Sbjct: 290 THLLNNGADLRSVSEMLGHSNLSTTEIYTHISFERLKQVYQQAHPKA 336 >UniRef50_C6J3X1 Tyrosine recombinase XerD n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3X1_9BACL Length = 323 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 32/261 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + + + + + I+ + +M V + P+ L E LL Sbjct: 68 ATIQRVSVTLRAFFRYLLQERRIE-QDPFIMLEMPKVEKKPPQTLTVEETERLLEAPKPD 126 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L K +L L+ TG R++E ++L + D +L + Sbjct: 127 TPLGLRDKAMLELLYATGIRVSELISLNKDDVNLELHFLRCTGERG-------------- 172 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR-TGRTEKARIWEVTDRTVRTWI 181 R++P L + + + + R R ++ + + Sbjct: 173 -----KERILPFGGVTA-EWLDLYLREGRSHLILDERENPALFPNRRGGRISRQGFWKLM 226 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + A + +TPHT RHS+A+H+L G ++ +Q L+GH S+ ++Y Sbjct: 227 KKYGQEAG-----ITSDITPHTLRHSFAVHLLERGADVRSVQELLGHSDASTIQMYVSRS 281 Query: 242 ALDVAARHRVQFAMPESDAVA 262 ++ + +++A Sbjct: 282 RSNLKTVYDAFHPRTMRESMA 302 >UniRef50_Q2C2Q0 Tyrosine recombinase n=4 Tax=Gammaproteobacteria RepID=Q2C2Q0_9GAMM Length = 302 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 84/258 (32%), Gaps = 32/258 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S A+ + A+ S + LPK L E++ LL D Sbjct: 73 SSLAMRLSALRSFFDFLVHQNVL-KANPAKGVAAPRKARPLPKNLDVDEMNQLLDVNDDD 131 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + + ++ ++ G R+ E + + SL+ V Sbjct: 132 PLAIRDRAMMELMYGAGLRLAELVGIDVRHISLSKGDLRVIGKGD--------------- 176 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R+VP S + + ++ R V+ + E Sbjct: 177 ----KERVVPFSG-LAREWVAKWLKLRDNIALAEEP--ALFVSKLGTRISTRNVQKRMAE 229 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A S + PH RHS+A HML + L+ +Q L+GH ++S+T++YT + Sbjct: 230 WGQKQAV-----SSHINPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQ 284 Query: 244 DVAARHRVQFAMPESDAV 261 +A + + Sbjct: 285 HLAKVYDEAHPRAKKRNK 302 >UniRef50_C4LJB1 Integrase/recombinase n=3 Tax=Corynebacterium RepID=C4LJB1_CORK4 Length = 327 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 89/263 (33%), Gaps = 40/263 (15%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 S + AV + G+ + + LP+ L A + + +LH + Sbjct: 92 RSSLSRRASAVRNFGRWLEHRGIVQ-SDPASRLSSPRPDKTLPRVLAADQTAEILHNLEV 150 Query: 66 --------DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 L ++ ++ TG R++E L GD A + Sbjct: 151 GAEEEDPIALRDLAMVEFMYGTGVRVSELCRLNIGDLDFARQTVTI-------------- 196 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR----TGRTEKARIWEVT 173 R+VP +S L+ + + + R + Sbjct: 197 -----LGKGNKQRVVPFGESAA-HALKRWIDIGRPAIAANGHHKDADEAVFLGKRGGRID 250 Query: 174 DRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISS 233 R VRT + +A V+PH RHS A +L G L+V+Q ++GH S+++ Sbjct: 251 PRQVRTVVHQA------TSTVSGGDVSPHALRHSAATDVLEGGADLRVVQEMLGHASLAT 304 Query: 234 TEVYTKVFALDVAARHRVQFAMP 256 T++YT V + + A Sbjct: 305 TQIYTHVDSERLKAVFNQAHPRA 327 >UniRef50_A7BDE1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDE1_9ACTO Length = 303 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 83/259 (32%), Gaps = 36/259 (13%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 S A A+ + ++ I AL LP L + LL+ D Sbjct: 72 RSTIARHTAAIRNFTSW-AMREGILVSDPAALLSSPRADQLLPSPLDESDARVLLNTARD 130 Query: 67 ---------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 + +L + G R++E AL + V Sbjct: 131 EAAAGGASQIRNWAILELTYACGLRVSEVCALDISSLNRDALTVRVVGKG---------- 180 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R+VP L + + + + + + R V Sbjct: 181 ---------NKERVVPYGPPAA-DALDHWLVRGRPQLAGERSGNALFLGDKGGRIDPRIV 230 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 R+ + + A A + PH RHS A H+L G L+ +Q ++GH S+S+T+ Y Sbjct: 231 RSMVHKTAARAGVH------DIAPHGLRHSTATHLLQGGADLRAVQEMLGHSSLSTTQRY 284 Query: 238 TKVFALDVAARHRVQFAMP 256 T V ++A ++ Sbjct: 285 THVDTARLSAIYQRAHPRA 303 >UniRef50_Q9JV76 Tyrosine recombinase xerD n=22 Tax=Neisseria RepID=XERD_NEIMA Length = 291 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 89/255 (34%), Gaps = 32/255 (12%) Query: 6 IHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP 65 S A + A I L + + +P + ++S LL Sbjct: 63 QRSSQARALSACKRLYIWMER-EGIRTDNPTRLLKPPKIDKNIPTLITEQQISRLLAAPD 121 Query: 66 -----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 L K LL ++ TG R++EA+ L G+ L Sbjct: 122 TDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRGCIT------------------ 163 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 R+VP+ + + + + + + ++ + Sbjct: 164 -ALGKGDKQRMVPMGQESAY-WVGRYYTEARPALLKGRSCDALFVSQKKTGISRQLAWMI 221 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + E + A ++PH+ RH++A H++ G+ L+V+Q ++GH +++T++YT V Sbjct: 222 VKEYASQAGIG------HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHV 275 Query: 241 FALDVAARHRVQFAM 255 + + + + Sbjct: 276 ANVWLQGVVKEHHSR 290 >UniRef50_C5TJ38 Tyrosine recombinase XerD n=5 Tax=Neisseriaceae RepID=C5TJ38_NEIFL Length = 293 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 81/229 (35%), Gaps = 31/229 (13%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEAL 87 + +LP + ++ ALL L K LL ++ TG R+ EA+ Sbjct: 91 DNPTRFLKAPKSERKLPTLITEAQIDALLAAPDVETSHGLRDKALLEVMYATGLRVTEAV 150 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 LT D L K RLVPL ++ Sbjct: 151 KLTLSDIDLHRGSIRTIGKGDKL-------------------RLVPLGQEAAY-WVERYC 190 Query: 148 AQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHS 207 + + + + + ++ + + E AA ++PH RH+ Sbjct: 191 NESRPLLLKNKICDEVFVSQKRSGISRQLAWMIVKEYAEAAGIAS------LSPHGLRHA 244 Query: 208 YAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 +A H++ G+ L+ +Q ++GH I++T++YT V + + + Sbjct: 245 FATHLVNHGVDLRSVQMMLGHSDINTTQIYTHVANIRLKNMVDEHHSRS 293 >UniRef50_B9XL74 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XL74_9BACT Length = 337 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 46/260 (17%) Query: 16 AVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV----------- 64 A+ + + + + + + + LPK+L A ++ LL Sbjct: 105 ALRTFYKFLIRHGVVS-ASPIKNVSLPKMEKRLPKFLTAQQMVELLGAPLKPLATPKKKG 163 Query: 65 PDL--------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 P +L T+++ G RI+E LT D V+ Sbjct: 164 PGRPISATVCYRDVAILETIYSCGLRISELCGLTAQDIDWNEQLVRVRGKG--------- 214 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT 176 + R VP+ + + + P E + ++ R Sbjct: 215 ----------KKERQVPIGEPALTAIRNYWSTLEQSP--GGGSPVFLGETEKAAALSPRV 262 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 ++ + + +A A D +TPH RHSYA HML AG L+ +Q L+GH + +T+V Sbjct: 263 LQQRLKKYLALAGLDPS-----LTPHKLRHSYATHMLDAGADLRSVQELLGHAHLITTQV 317 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT V + + Sbjct: 318 YTHVSTERLKRAYDSAHPRA 337 >UniRef50_D0W4M6 Tyrosine recombinase XerD n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W4M6_NEICI Length = 308 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 93/254 (36%), Gaps = 32/254 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 S A + A + L + + +P + ++S LL Sbjct: 81 RSSQARALSACKRLYIWMER-EGMRTDNPTRLLKPPKIDKNIPTLITEQQISRLLSAPDT 139 Query: 66 ----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L K LL ++ TG R++EA+ L+ G+ L Sbjct: 140 DTPHGLRDKALLELMYATGLRVSEAVRLSFGNLDLDRGCIT------------------- 180 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R+VP+ ++ + + + + + ++ + + Sbjct: 181 TLGKGNKQRIVPMGRESVY-WVERYYKEARPLLLKGRSCDALFVSQKKTGISRQLAWMIV 239 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 E + A + ++PH+ RH++A H++ G+ L+V+Q ++GH +++T++YT V Sbjct: 240 KEYASQAGIE------HISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVA 293 Query: 242 ALDVAARHRVQFAM 255 + + + + + Sbjct: 294 NVRLHSVVKEHHSR 307 >UniRef50_B2HX80 Site-specific recombinase XerC n=17 Tax=Acinetobacter RepID=B2HX80_ACIBC Length = 308 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 82/258 (31%), Gaps = 35/258 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S + ++ + A ++ ++ LP + V+ +L Sbjct: 74 SSMQRHLTSIRQFMKWAEQGKYLEI-NPTDDFKLKRQPRPLPGMIDIETVNQILDQPMPE 132 Query: 67 --------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 L K +L L+++G R+ E LT D + Sbjct: 133 KPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIKDIDFNRQLVRITGKG----------- 181 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVR 178 R+VP L + I ++ R +T R + Sbjct: 182 --------NKTRIVPFGKK-AKESLLNWLKIYNIWKGHFDQNASVFISQRGGALTPRQIE 232 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + A + + PH RH +A HML + L+ +Q ++GH ++S+T++YT Sbjct: 233 KRVKLQAQRAGVNV-----DLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQIYT 287 Query: 239 KVFALDVAARHRVQFAMP 256 + +A + Sbjct: 288 HIDFDHLAQVYDQAHPRA 305 >UniRef50_A6CC23 Integrase/recombinase n=2 Tax=Planctomyces RepID=A6CC23_9PLAN Length = 316 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 40/269 (14%) Query: 1 MSGSVIH--------SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYL 52 +SG + H + + + + + L + A L + LPK L Sbjct: 73 LSGYLQHLNRRKLAATTVSRHLVTLKLFFRYLVLEGVLAESVA-DLLNSPKLWKYLPKVL 131 Query: 53 LAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 +V+ LL L + +LA ++ TG R+ E + L L Y Sbjct: 132 SPEKVNQLLAAPCRQDRYPLRDRAILAMMYATGCRVTEIVTLPLNSVKLTEGY------- 184 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR-RTGRTEK 166 R R+V L + V+ ++ + + + RRN Sbjct: 185 ------------ARCVGKGNKERMVSL-NPVAVAAVEAYLRHERPVLTRRNTTEQALFLN 231 Query: 167 ARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLM 226 +++ V + + A S V+PHT RHS+A HM+ G ++ LQ L+ Sbjct: 232 RGGKQLSRVMVWNIVKKNAARVGC-----SKEVSPHTLRHSFATHMMAGGAEIRALQELL 286 Query: 227 GHKSISSTEVYTKVFALDVAARHRVQFAM 255 GH +I +T++YT V + A H++ Sbjct: 287 GHANIRTTQIYTHVDHSRLKAVHQMYHPR 315 >UniRef50_D2MLX1 Phage integrase, N-terminal SAM domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLX1_9FIRM Length = 297 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 93/259 (35%), Gaps = 34/259 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + +S + ++ S + ++ I ++ + LP+YL +V LL Sbjct: 68 LSNSSYDRHLSSLRSFFRYLNVVEGI-GHNPMSSFKNVKTSRPLPEYLTVDQVQDLLDSF 126 Query: 65 P-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L + ++ L+ G RI+E + D Y V Sbjct: 127 DLEDKKGLRNRCIVELLYACGLRISECANIKIQDIHFRDYYVRVMGK------------- 173 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 + R+VP L + + + ++ ++ R+++ Sbjct: 174 ------ESKERIVPFYKE-LGDLLTKYLKK---YGSFSQLSDPFFKGSKGKAISVRSIQL 223 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + + + PH RHS+A H+L G L+++QSL+GH+++S+T++YT Sbjct: 224 LLEKKGRE-----LKLPFQLHPHVLRHSFATHLLDNGADLRIVQSLLGHENLSTTQIYTH 278 Query: 240 VFALDVAARHRVQFAMPES 258 V + + Sbjct: 279 VSQDTLRRVIAETHPLSHK 297 >UniRef50_Q6MD42 Probable XerD protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD42_PARUW Length = 291 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 40/259 (15%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S S+ + A+ + I L L + + +P L E+ +L Sbjct: 67 SASICRALI-----AIKVLFRFLKREGMIT-TNILLLMETPKLWQLIPDVLSLEEIDRIL 120 Query: 62 HYV-----PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 K +L TL+ G R++E L D Sbjct: 121 AIPNIQTWRGARDKAILETLYACGLRVSELCQLKIYDVD--------------------- 159 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT 176 T R+ R+VP+ ++ + ++ +R + +T Sbjct: 160 DTFVRVLGKGGKERIVPIGQQ-AIAAIDGYLSFR--EGGENSRNEFLFITKKSKPLTRAL 216 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 V + A + ++PHTFRH++A H+L G L+V+Q ++GH SI+ST+ Sbjct: 217 VWKLVKFYARQA-----SIFKSISPHTFRHTFATHLLDHGADLRVIQDMLGHASINSTDR 271 Query: 237 YTKVFALDVAARHRVQFAM 255 YT V + + + Sbjct: 272 YTHVSQIRLQQAFQAFHPR 290 >UniRef50_B2KAP5 Integrase family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP5_ELUMP Length = 291 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 92/252 (36%), Gaps = 30/252 (11%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 AV S + + I + ++P+ L E+S LL + P Sbjct: 65 KSVFRKTQAVKSFYKYLIINGDI-KEDPCRFLLSPKLTQKIPETLTKEEISRLLSFPPKT 123 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 ++ +L + G R++E ++L +L + Sbjct: 124 FAEIRTLTILELFYACGLRVSELVSLRIESVNLKDKWVL-------------------AY 164 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R +P+ D V L+ +++ + ++ + + +++ +V + + Sbjct: 165 GKGAKQRFIPIHD-RAVKVLEIYLSEREKYLKGKESASEIFINKNGKKISRMSVWKDVND 223 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A + PH FRH++A H+L G L+ LQ ++GH + +T++YT + Sbjct: 224 LGRLAG-----IERSLHPHLFRHTFATHLLIGGADLRSLQEMLGHADLQTTQIYTHLDVQ 278 Query: 244 DVAARHRVQFAM 255 + +H+ Sbjct: 279 SLKEKHKKFHPR 290 >UniRef50_A5D2W6 Tyrosine recombinase xerC n=5 Tax=Clostridia RepID=XERC_PELTS Length = 306 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 98/261 (37%), Gaps = 35/261 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + + A + A S + ID L + LP++L E L+ Sbjct: 70 LARATMARRLAAWRSFYRYLYREKIIDG-NPLLRVASPKLEKRLPRFLYEDEAKELVEAP 128 Query: 65 P-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + + LL TL+ G RI+E L L + Sbjct: 129 DTKQPLGMRDRALLETLYAGGLRISE-------------------LVLLDLGDLDISSGY 169 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPM----ERRNRRTGRTEKARIWEVTDR 175 R+ + RLVPL S V LQ +A+ + + + R ++ R Sbjct: 170 IRVTGKRARERLVPLG-SMAVEALQAYLAKARPRLMANSVAKKINNALFLNCRGERLSAR 228 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 +R + + V V+ ++PHT RHS+A H+L AG L+ +Q LMGH +SST+ Sbjct: 229 GIRKILDKYVEK-----VSLERKISPHTLRHSFATHLLNAGADLRSVQELMGHVRLSSTQ 283 Query: 236 VYTKVFALDVAARHRVQFAMP 256 VYT V + +R Sbjct: 284 VYTHVTGERLKKVYRKSHPRA 304 >UniRef50_Q8NNZ9 Tyrosine recombinase xerC n=13 Tax=Actinomycetales RepID=XERC_CORGL Length = 308 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 79/256 (30%), Gaps = 36/256 (14%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 + A +V + A + A L + +LPK L + + Sbjct: 83 RATLARRTASVKAFSSWAQKNGHLKADEAARLI-SPKITRDLPKILGEQQAGDFVENAAS 141 Query: 67 ------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 L +L L+ TG R+ E + D V Sbjct: 142 TNEEEFLRDSAILELLYATGMRVAELCGIDLSDIDYDRKMVRV----------------- 184 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 R+VP +S L+ + E R + R VR Sbjct: 185 --LGKGNKERVVPFGES-AHKALRNWLDVRD---EMTEDPKALFVGVRGQRINARQVRRI 238 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + A D ++PH+ RH+ A H+L G L+ +Q L+GH S+ +T++YT V Sbjct: 239 VDRAAKVTGVD------HLSPHSLRHTAATHLLDGGADLRQVQELLGHSSMQTTQIYTHV 292 Query: 241 FALDVAARHRVQFAMP 256 + Sbjct: 293 SNKRLLEAFNKAHPRA 308 >UniRef50_Q60AJ2 Integrase/recombinase XerC n=1 Tax=Methylococcus capsulatus RepID=Q60AJ2_METCA Length = 304 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 31/256 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 ++ A+ +D + LP+ L V+ LL D Sbjct: 71 RSLQRLLAAIRGFFDDLLKKRLLD-VNPARAVRPPRSGRRLPRLLDVDAVAGLLDAPADD 129 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + + +++G R++E + L D FV+ Sbjct: 130 RLETRDRAMWELFYSSGLRLSELVGLDVVDVDFGAGSVFVR------------------K 171 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R VP+ + + + + + + + + RTV + Sbjct: 172 GKGGKARYVPVGAK-ALEAIGAWLEARR--VLTGAGQPALFLSRQGRRIAPRTVEMRLER 228 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 A S V PH RHS+A HML A L+ +Q L+GH ++++T++YT V Sbjct: 229 WRAKLG-----LSERVHPHMLRHSFASHMLEASGDLRAVQELLGHATLATTQIYTHVDFQ 283 Query: 244 DVAARHRVQFAMPESD 259 +AA + D Sbjct: 284 RLAAVYDQSHPRARRD 299 >UniRef50_Q97HE5 Tyrosine recombinase xerD n=18 Tax=Clostridium RepID=XERD_CLOAB Length = 292 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 44/261 (16%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 +S + ++ + + + +D + +M + P L EV LL Sbjct: 65 NSSIVRNIVSIRNFFKYLEIKGIMD-DNPVTQYEMPKIRRNFPDILTIEEVEKLLMGPDG 123 Query: 67 -----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + K +L ++ TG ++ E L LT D +L Y + Sbjct: 124 NTDKGIRDKAMLEIMYATGMKVTELLNLTIYDINLKLSYIKCRGI--------------- 168 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 + R++P+ S+ V L+ + + ++T + I Sbjct: 169 ----KNKERIIPMG-SYAVKCLEIYLKVRTK--LNVQNIDYLFFNLQGDKMTRQGFWKII 221 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY---- 237 + + + +T RHS+A+H+L G +K +Q L+GH +++T++Y Sbjct: 222 KQYAQESG-----IKKKINAYTLRHSFAVHLLQNGADIKTIQELLGHSDMATTQIYSGMY 276 Query: 238 --TKVFALDVAARHRVQFAMP 256 T +A ++ Sbjct: 277 RKT-----RIAEVYKKTHPRA 292 >UniRef50_B2UNK4 Integrase family protein n=2 Tax=Verrucomicrobiaceae RepID=B2UNK4_AKKM8 Length = 295 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 32/255 (12%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP- 65 S V + + + + ++ ++ L +M LP L VS LL + Sbjct: 66 RSSMRVEMVHLRIFFRWLAGTGILEKDPSVFL-EMPRQGLSLPHVLDQKTVSNLLESIDI 124 Query: 66 -----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 + LL ++ G R++E + F + V Sbjct: 125 QDIPLGCRDRALLEMIYACGMRVSEIINCKLESFDKDEAFVRV----------------- 167 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 RLVP+ S + LQ + + + + R ++ R +T +R Sbjct: 168 --LGKGNKTRLVPVGRS-ALDALQMYLEKGRPKLVRTGTKSHIFLTVRGRPLTRERIRQI 224 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + E AA + V PH RHS+A H+L G L+++Q ++GH IS+T++YT + Sbjct: 225 LRERARAAGLE-----QHVFPHILRHSFATHLLENGADLRIIQEMLGHADISTTQIYTHL 279 Query: 241 FALDVAARHRVQFAM 255 + + H Sbjct: 280 EQQRLNSIHHRFHPR 294 >UniRef50_B9XMB7 Integrase family protein n=1 Tax=bacterium Ellin514 RepID=B9XMB7_9BACT Length = 306 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 84/247 (34%), Gaps = 31/247 (12%) Query: 14 VPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----HYVPDLH 68 + A+ + + A + + LPK L E++ LL L Sbjct: 85 IAALRAFYKFAENEKIL-PLNIAESLSLPRRWKRLPKALSDLEITQLLTLEIPETPRTLG 143 Query: 69 RKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQT 128 + +L + +G R+ E + L + V Sbjct: 144 DQAVLELAYASGLRLAELRNIRMEQLHLEVGFINVIGKG-------------------NK 184 Query: 129 HRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAA 188 R+VP+ V LQ + + + R T+ I + V + Sbjct: 185 ERVVPVGSK-AVQALQRYLESGRPKLVTPRSPANVFLTMRGTPFAAVTLWKRIKDRVKRS 243 Query: 189 AADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR 248 VTPH RHS+A H+L G L+V+Q L+GH +IS+TE+YT V + Sbjct: 244 GVA-----RNVTPHMLRHSFATHLLEHGADLRVIQELLGHANISTTEIYTHVSGSRLREV 298 Query: 249 HRVQFAM 255 HR Sbjct: 299 HRKFHPR 305 >UniRef50_C5RBD8 Integrase/recombinase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBD8_WEIPA Length = 308 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 85/259 (32%), Gaps = 34/259 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 A V ++ S + + + LP+Y E++ + Sbjct: 76 RTIARKVSSLRSFYRFLINNEMV-AENPFVGIVLKKPGQHLPRYFYQKELTKMFDVVMTD 134 Query: 63 -YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 L +LL L+ TGAR++E +T + + Sbjct: 135 QSALGLRNHLLLEMLYGTGARVSEIANMTLQNVDSHARVVTITGKG-------------- 180 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERR--NRRTGRTEKARIWEVTDRTVRT 179 R+VP + L + + + + + R VT + Sbjct: 181 -----NKTRIVPFGR-YAADALAKYLKTGRPVLASKQADTSNKLFLNQRGAPVTTAGIEY 234 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + + + VT H FRH++A +L L+ +Q L+GH S+S+T++YT Sbjct: 235 ILKQIGKKSG-----LTQEVTAHMFRHTFATDLLNNQADLRTVQQLLGHSSLSTTQIYTH 289 Query: 240 VFALDVAARHRVQFAMPES 258 V + +R F Sbjct: 290 VTTDALQKSYRNFFPRASE 308 >UniRef50_A0LEB8 Tyrosine recombinase xerC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=XERC_SYNFM Length = 328 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 85/260 (32%), Gaps = 36/260 (13%) Query: 11 AVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV------ 64 A + + S + + AL + ++P +L +V LL + Sbjct: 90 ARKLSTLRSFYHFLNDRELV-RENPAALVAYPKLGTKIPSFLGVDDVFHLLDSLNAGAAR 148 Query: 65 -----PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 L +++TG R++E + D V Sbjct: 149 AGASWRRCRNWALFECMYSTGVRVSELAGMDESDVDFHEGMVRVLGKGS----------- 197 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R+VP+ + + E R + AR +T R+V Sbjct: 198 --------KERIVPVGGKALDAVKLYLRVLDSQFPEARRMGSALFRNARGRRLTTRSVHR 249 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + ++PH RH++A H+L +G L+ +Q ++GH ++S+T+ YT Sbjct: 250 LLRMELRRCG-----LWQHLSPHGLRHTFATHLLNSGADLRAIQEMLGHSNLSTTQRYTH 304 Query: 240 VFALDVAARHRVQFAMPESD 259 V + + D Sbjct: 305 VHVDQLMKVYDAAHPRSRRD 324 >UniRef50_Q7ZAK0 Tyrosine recombinase xerC n=4 Tax=Corynebacterium RepID=XERC_COREF Length = 310 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 36/256 (14%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 + A +V S A I A L V LP+ L + + Sbjct: 85 RATLARRTASVKSFSTWAVKNGLISGDEAARLV-SPKVTRNLPRVLGEVQAGEFMGSAAA 143 Query: 67 ------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 +L L+ TG R++E L GD V Sbjct: 144 DTEDEFRRDSAILELLYATGMRVSELCGLDLGDVDHHRRMVRV----------------- 186 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 R++P + + Q + A+ ++ R + R +R Sbjct: 187 --LGKGDKERMIPFGKAAADALEQWLEARDRM----AKVEDAMFVGVRGGRIDARQIRRI 240 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + A AD ++PH+ RH+ A H+L G L+ +Q ++GH S+ +T++YT V Sbjct: 241 VDRTAQVAGAD------HLSPHSLRHTAATHLLDGGADLRQVQEMLGHSSLQTTQIYTHV 294 Query: 241 FALDVAARHRVQFAMP 256 + + R Sbjct: 295 SSQRLLEAFRQAHPRA 310 >UniRef50_B3DX82 Site-specific recombinase XerD n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DX82_METI4 Length = 280 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 93/268 (34%), Gaps = 50/268 (18%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S V A+ S I+ + + + LP+YL +V ALL+ Sbjct: 44 SSIRVRFAALRSFFNFFYREKKINKESPFSQVMLPKPDRNLPRYLSLEQVQALLNAPQKK 103 Query: 68 -------------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATL 108 + L TL+ G R+ E +L R +F + V+ Sbjct: 104 WEKEKEKGKKSRWNEWQWKRDQAWLETLYGAGLRVGELSSLKRKNFFPSDLALLVEGK-- 161 Query: 109 KQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKAR 168 ++ R L + + L + + E +R Sbjct: 162 -----------------RKKERYCILGE-VATASLCSYLESCPFESEF------LFVSSR 197 Query: 169 IWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGH 228 +T R + + E +A A D ++PH RH++A H+L G L+ +Q L+GH Sbjct: 198 GKPLTPRFFQLSLKEYLAIAGLDQS-----ISPHKLRHTFATHLLEGGADLRSIQELLGH 252 Query: 229 KSISSTEVYTKVFALDVAARHRVQFAMP 256 +S+T++YT V A + + Sbjct: 253 AHLSTTQIYTAVSAEHLKESYFRTHPRA 280 >UniRef50_A3ZUD5 Integrase/recombinase n=2 Tax=Planctomycetaceae RepID=A3ZUD5_9PLAN Length = 291 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 93/256 (36%), Gaps = 33/256 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 + A V ++ + L + + L + +P + ++ LL Sbjct: 62 ASIARAVVSLKIFFRYLQLEGILQ-DNLVELLGSQKIWRRIPSVIAPHKIDDLLTAPWSE 120 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + LL L+ TG R +E L D L Y + KQ Sbjct: 121 DPYWRRDRALLEVLYATGCRASEVSGLRMDDVHLDEGYVKCEGKGSKQ------------ 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG--RTEKARIWEVTDRTVRTW 180 R+ PL+ ++T + + + + ++N R ++ + Sbjct: 169 -------RIAPLAQKSA-RVVKTYLDEERPRLSKKNLRDAAFLFLSRSGKRLSRIAIWEL 220 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + A A D V+PH+ RHS+A H+L G L+ +Q +MGH SI++T++YT V Sbjct: 221 VKKYAARAGIDP-----DVSPHSLRHSFATHLLAGGADLRHVQEMMGHASIATTQIYTHV 275 Query: 241 FALDVAARHRVQFAMP 256 + H Sbjct: 276 DQSRLKKVHAQYHPRA 291 >UniRef50_C0W041 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W041_9ACTO Length = 302 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 91/259 (35%), Gaps = 36/259 (13%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY--- 63 + A ++ A ++ +L L + + V + LP+ L +++ L ++ Sbjct: 71 RASVARYAASLRLFSSWALKQGHLNSDPSLKL-KTAKVDNHLPQVLSLEQINQLFNHLVE 129 Query: 64 ------VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 V + L++ G R+ E + L + V Sbjct: 130 TAQTGNVNAIRDWATSELLYSCGIRVAELVGLNLTSVDGSNRTLRVIGKG---------- 179 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 RLVP + L+ V Q + + +R + R V Sbjct: 180 ---------NKERLVPFGTP-ALESLRAWVTQGRPQLVNERSGQALFLGSRGGRIDQRIV 229 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 R + +A A ++PH RH A HML G L+ +Q ++GH S+++T+ Y Sbjct: 230 RECLEKACVQAGVPV------LSPHGLRHCAATHMLEGGADLRTVQDMLGHASLATTQRY 283 Query: 238 TKVFALDVAARHRVQFAMP 256 T V A+ ++ R Sbjct: 284 THVDAVRLSNIMRQAHPRA 302 >UniRef50_B7CAN0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM Length = 300 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 31/250 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S M+ +++S S +L L LP YL EV + D Sbjct: 69 SSLNRMIASIHSFHLQISTMHPEIKDVSL-LIHGMKSSKHLPVYLSVDEVKKVFSSFQDN 127 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + K +L L++ G R++E L D L V+ Sbjct: 128 EIDQYNKTILVVLYSCGLRVSELCDLKLNDVHLTEQILKVKGKGD--------------- 172 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R++P+S S+ VSQ++ + ++ + +N + T + V I + Sbjct: 173 ----KERIIPIS-SYCVSQMKYYLDSIRFVWDVKNV-SYFFVNRLGHICTRQYVHLMIKQ 226 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 V + + + ++ H+FRHS+A H+L L+++Q L+GH +IS+T++YT + Sbjct: 227 KV-----NELNLNPKISAHSFRHSFATHLLDGDADLRIVQELLGHSNISTTQIYTHIQDK 281 Query: 244 DVAARHRVQF 253 +++ + F Sbjct: 282 RLSSVYDRCF 291 >UniRef50_B2S2Y8 Integrase/recombinase n=4 Tax=Treponema RepID=B2S2Y8_TREPS Length = 306 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 93/263 (35%), Gaps = 37/263 (14%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 + V A + A+++ Q L + LP+ L +V+ L Sbjct: 63 AAGVSGKTIAKDMAALHAFYQFLILEQVR-PDNPMQDVDAPRRAYSLPRVLSPEQVNTFL 121 Query: 62 HYVP-----DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 +P + + L ++ G R++EA++L+ D A V Sbjct: 122 QSIPLCTPGGVRDRALFELIYAAGLRVSEAVSLSLSDIFFAERLLKVTGKG--------- 172 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQL-----KIPMERRNRRTGRTEKARIWE 171 R+ P + +Q + E ++ + Sbjct: 173 ----------NKERMAPFGEQACYFLMQYIREARVRFTSAKHPENSEKKGAVFLNRQGGR 222 Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 ++ + + + + + + HTFRHSYA H+L G+ L +Q L+GH I Sbjct: 223 LSRKGIWKRLQDIEIRSGVET-------HVHTFRHSYATHLLAGGVDLHSVQCLLGHADI 275 Query: 232 SSTEVYTKVFALDVAARHRVQFA 254 ++T+VYT V + A HR F+ Sbjct: 276 ATTQVYTHVENGQLEACHRACFS 298 >UniRef50_C4FX95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX95_9FIRM Length = 331 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 98/254 (38%), Gaps = 33/254 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL- 67 + ++ S I+ + L Q + LP++ E++ L + Sbjct: 98 SIRRKLSSLRSFFTYCLSQGWIE-TNPMELVQYQVKKKTLPQFFYEQELTQLFDSLYKRE 156 Query: 68 -----HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 +MLL L+ TG R++E L+ +L V Sbjct: 157 DDAAWRDRMLLEVLYATGMRVSELSELSLERLNLEVQLIRV------------------- 197 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R+VPL DS ++ ++ L+ ++R N + ++ R +RT + Sbjct: 198 LGKGNKERIVPLGDS-ATQAIRDYLSHLRPKIDR-NNSPYLLLTDKGAPMSPRQIRTRLK 255 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 V A + + PH RHS+A H+L G L+ +Q L+GH ++SST++YT V Sbjct: 256 SLVEEQAMNL-----KIYPHKLRHSFATHLLNKGADLRTVQELLGHANLSSTQIYTHVTK 310 Query: 243 LDVAARHRVQFAMP 256 + +++ Sbjct: 311 DQLRSQYLKAHPRA 324 >UniRef50_D2Q591 Integrase/recombinase (XerD/RipX family) n=10 Tax=Bifidobacterium RepID=D2Q591_9BIFI Length = 318 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 100/274 (36%), Gaps = 50/274 (18%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + ++++ + +L + + A + LP L EV L+ +P Sbjct: 71 RSKARRLASIHAFHRF-ALSEHVVHDDVAAQVKAPKGASTLPDVLSVDEVMRLMDSIPLS 129 Query: 66 ------------------DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLAT 107 L K LL ++ TG+R++EA Sbjct: 130 RHHDGKQGHGDAAADDPVMLRDKALLEFMYATGSRVSEAC-------------------G 170 Query: 108 LKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR----RTGR 163 + R+ RLVP+ S+ L+ + + ++ +++ Sbjct: 171 VDLDDIDLDDKVARLMGKGSKQRLVPVG-SFACEALRRYLRFGRPVLQSKSKGAAEHRAV 229 Query: 164 TEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQ 223 R ++ ++V I A A + P+ PHT RHS+A H++ G ++ +Q Sbjct: 230 FLNKRGKRLSRQSVWEIIRTAGERA-----HITKPLHPHTLRHSFATHLIQGGADVRTVQ 284 Query: 224 SLMGHKSISSTEVYTKVFALDVAARHRVQFAMPE 257 L+GH S+++T++YT V ++ + Sbjct: 285 ELLGHASVTTTQIYTHVSPENLIEAYLTAHPRAR 318 >UniRef50_B2U7W2 Tyrosine recombinase xerC n=58 Tax=cellular organisms RepID=XERC_RALPJ Length = 328 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 86/259 (33%), Gaps = 22/259 (8%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A + A + +L A + + LPK L + AL+ +P Sbjct: 83 RSIARALSAWRGWFKWMALRDAAVTANPVDGVRAPKSPKRLPKALSVEQAVALMEQLPGD 142 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + + ++ G R++E ++L A ++ Sbjct: 143 DAETIRDRAVNELFYSCGLRLSELVSLDMRHVK--------AGAYESASWLDLEAREVQV 194 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVA---QLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R VP+ L +A QL R + R ++ Sbjct: 195 LGKGSKRRTVPVGTK-ATEALAAWLAVRAQLAKSDAAPEDAHALFLSPRGKRLAQRQIQL 253 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + AA V PH RHS+A HML + L+ +Q L+GH SI+ST+VYT Sbjct: 254 RMKRNAIAAGV-----PADVHPHVLRHSFATHMLQSSGDLRAVQELLGHASIASTQVYTS 308 Query: 240 VFALDVAARHRVQFAMPES 258 + +A + + Sbjct: 309 LDFQHLAKIYDQAHPRAKK 327 >UniRef50_A6G731 Integrase/recombinase XerD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G731_9DELT Length = 302 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 91/247 (36%), Gaps = 32/247 (12%) Query: 16 AVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRK 70 AV + ++ + ++LP+ L EV L+ L Sbjct: 82 AVRGLFRWLRSEQLVE-VDPTQGIALPKAVNKLPELLSREEVVRLIAAPGVDTPLGLRDT 140 Query: 71 MLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHR 130 LL ++ TG R++EA L L + KQ R Sbjct: 141 ALLEFMYATGCRVSEACDLELSSLHLDQGLVVLTGKGSKQ-------------------R 181 Query: 131 LVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG-RTEKARIWEVTDRTVRTWIGEAVAAAA 189 +VPL D V+ L + + + + R R R ++ + + + +A Sbjct: 182 MVPLGDCALVALL-AWLEEGRPELVARAPREAHVFVNKRGSRLSRQGCFFRLRQHAVSAG 240 Query: 190 ADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 + ++PH RHS+A H++ G L+ +Q+L+GH IS+T+VYT + V + Sbjct: 241 -----ITRDISPHKLRHSFATHLIEGGADLRAVQTLLGHADISTTQVYTHLSQSHVRHAY 295 Query: 250 RVQFAMP 256 + Sbjct: 296 DLHHPRA 302 >UniRef50_C1QB33 Site-specific recombinase XerD n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QB33_9SPIR Length = 310 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 94/260 (36%), Gaps = 30/260 (11%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S S+ +S + + ++ + D + + + + + K+L ++ +L Sbjct: 73 SKSLTNSTMSRHLSSIKKFYKYLIRNGLSDKTRIVDM-KSPKREEHIAKFLSLDDIDRIL 131 Query: 62 HYVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 D L KM+ ++ G R++E +L + K R Sbjct: 132 AIDDDGDFTLLRDKMMALFMYAIGLRVSELASLRLSMIKKGDETLRICGKGSKVRD---- 187 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRT 176 +P+ Y + M + I E ++DR+ Sbjct: 188 ---------------IPVLPVVYENWDIYMEKRRMIQKEYSQNNDYLFINRFGKPISDRS 232 Query: 177 VRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEV 236 +RT + + A S+ +PHT RH++A H+L ++ +Q L+GH++I++T+ Sbjct: 233 IRTSMKRLIRNA-----NISMDFSPHTLRHTFATHLLNNDAEIRGVQELLGHETIATTQR 287 Query: 237 YTKVFALDVAARHRVQFAMP 256 YT V + + Sbjct: 288 YTHVTNSRLFEVYNRFHPHS 307 >UniRef50_D1CD80 Integrase family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD80_THET1 Length = 310 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 34/236 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---- 63 S A + A+ S Q +D A L V PK + EV+ LL Sbjct: 75 STQARKMAAIKSFFQFLVAKSVVDQNPASDLI-SPRVQKYWPKAISVQEVNMLLAAASDS 133 Query: 64 --VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + + +L L+ TG R++E ++L D +L + Sbjct: 134 ETPEGIRDRAMLEVLYRTGLRVSELVSLNVDDINLDESHLKCIGRG-------------- 179 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R VPLS V L+ + + + + R R +T + + Sbjct: 180 ------KTRKVPLSQP-AVDVLKLYLERSRPLLVRGQDEQALFVNHRGQRLTRQGFWLIL 232 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + A +TPHT RHS+A HM+ GI L+ +Q +GH SI++T+VY Sbjct: 233 KAYASEAGI------KGITPHTLRHSFAAHMIDGGIDLRQVQEWLGHASITTTQVY 282 >UniRef50_C0QXF7 Tyrosine recombinase XerD n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXF7_BRAHW Length = 309 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 30/259 (11%) Query: 3 GSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH 62 S+ +S + + ++ + D + + + + + K+L ++ +L Sbjct: 74 KSLTNSTMSRHLSSIKKFYKYLIRNGYSDKNRIVDM-KSPKREEHIAKFLSIDDIDNILA 132 Query: 63 YVPD-----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 + KM+ ++ G R++E +L + K R Sbjct: 133 IDDGGDFTLIRDKMMALFMYAIGLRVSELASLKLSMIKKGSETLRICGKGSKVRD----- 187 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 +P+ Y + M + I E ++DR++ Sbjct: 188 --------------IPILPIIYENWDVYMEKRRIIQREYSENNDYIFINRFGKPISDRSI 233 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 RT + + A S+ +PHT RH++A H+L ++ +Q L+GH++I++T+ Y Sbjct: 234 RTSMKRLIRNA-----NISIDFSPHTLRHTFATHLLNNDAEIRGVQELLGHETIATTQRY 288 Query: 238 TKVFALDVAARHRVQFAMP 256 T V + + Sbjct: 289 THVTNSRLFEVYNKFHPHS 307 >UniRef50_C4L386 Tyrosine recombinase XerD n=3 Tax=Firmicutes RepID=C4L386_EXISA Length = 295 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 89/254 (35%), Gaps = 32/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S V ++ + +L L + +LP EV LL VP Sbjct: 69 SSLRRAVSSIRMFHHHLKMTGVTTTDPSLYL-ESPKAEKQLPDTWSQTEVERLLDSVPTS 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + +L L+ TG R++E L L + + Sbjct: 128 DPLSLRDRAMLELLYGTGMRVSE-------------------LLGLDLDDLQFELGYLQC 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R++P+S S S ++ + Q + + R R ++ + I Sbjct: 169 EGKGERARIIPVS-SVAQSFVERYIQQARNGLGGRETE-ALFLNGRGGRLSRQGFWKMIK 226 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 A +TPH RHS+A H+L G L+ +Q ++GH +++T+VYT V Sbjct: 227 RRAKLAG-----IEKEITPHVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVNK 281 Query: 243 LDVAARHRVQFAMP 256 + +R Sbjct: 282 SRLHDVYRKHHPRA 295 >UniRef50_UPI0000D54C0A tyrosine recombinase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54C0A Length = 213 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 90/234 (38%), Gaps = 33/234 (14%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYVP----DLHRKMLLATLWNTGARINEALA 88 Q + + LPK L +V LL + P D K L L+++G R++EA+ Sbjct: 6 SDPFESVQSPKIPETLPKALTPEDVEKLLSFQPKSKSDFRDKAFLELLYSSGLRVSEAVG 65 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 + F + V + R++P+ + ++ + Sbjct: 66 VNLSSFESELSFVKV-------------------LGKGKKERMLPVG-KFAKEAIEKWLV 105 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 + + + N ++ R ++ I A PV+PH RHS+ Sbjct: 106 EREHIAKDTN---ALFINKYGKRISIRAMQERIYNISIAQGLS------PVSPHMLRHSF 156 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVA 262 A H+L + L+ +Q ++GH S+S+T++YTK+ +A + + + Sbjct: 157 ATHILESSGDLRSIQEMLGHSSLSTTQIYTKLNFQQLAKIYDRSHPHGKKENKT 210 >UniRef50_D2R3Y9 Integrase family protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3Y9_9PLAN Length = 314 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 34/257 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A V + + L I L + +P L + LL Sbjct: 84 KSIARHVVTLKLFLRYLQL-EGIIKDNPAELLGTTKTAATIPDVLSPTVAARLLDAPQPY 142 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + LL L+ TG R +E + D + + + Sbjct: 143 DPLFRRDRALLELLYATGCRASEVSVMEVRDLRIEDRFCLARGKGS-------------- 188 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT---GRTEKARIWEVTDRTVRT 179 RLVPL D ++ ++ + + + ++++ +R +T + + Sbjct: 189 -----KERLVPLGDP-ALAAVEAYLEHERPKLAAKSKQGVPPWLLLSSRGQRLTRQKIWE 242 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + A ++PHT RHS+A H+L G L+ +Q L+GH SI +T++YT Sbjct: 243 LVKQYALRCGA-----PASMSPHTLRHSFATHLLSGGADLRQVQELLGHASIGTTQIYTH 297 Query: 240 VFALDVAARHRVQFAMP 256 V + H Sbjct: 298 VDQSRLKKIHSQFHPRA 314 >UniRef50_Q72RY9 Tyrosine recombinase xerC n=6 Tax=Leptospira RepID=XERC_LEPIC Length = 318 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 36/261 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH-- 62 + + + ++ + + + V E+PK E +L Sbjct: 87 IDRRSQSRKLSSLRTFYKVLLREDLV-KSNPATQLSFPKVRKEVPKNFRINETEEILEFE 145 Query: 63 -----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 V ++ + ++ L+++G R+ E + S V Sbjct: 146 SENASEVSEIRDRAMIEVLYSSGLRVFELVNAKLNSLSKDLTVLKV-------------- 191 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 + R V VS LQ + R ++T R V Sbjct: 192 -----LGKGRKERFVYFGKE-AVSSLQKYLEYRN---VSFPDAEEIFLNQRGKKLTTRGV 242 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 R + E + +TPH FRH++A +L AG ++ +Q L+GH S+S+T++Y Sbjct: 243 RYILNERRKKMGWE-----KTITPHKFRHTFATDLLDAGAEIRAVQELLGHSSLSTTQIY 297 Query: 238 TKVFALDVAARHRVQFAMPES 258 V + +R Sbjct: 298 LSVSKEKIKEVYRKAHPHARK 318 >UniRef50_Q2PYI3 Tyrosine recombinase xerC n=1 Tax=uncultured marine bacterium Ant4D3 RepID=Q2PYI3_9BACT Length = 312 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 90/264 (34%), Gaps = 38/264 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY---- 63 ++ + S L + + + +LP L ++S +L+ Sbjct: 75 KSIQRILSSWRSFFTYL-LQQNLVKLNPVDGIRAPKSPRKLPNSLDPDQISQVLNATITS 133 Query: 64 --VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + K +L ++ G R+ E +L D L V Sbjct: 134 DDPMAMRDKAMLELTYSCGLRLAELASLNVFDIDLTDASLIVTGKG-------------- 179 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R +P+ ++ L++ + Q + + R + R ++ + Sbjct: 180 -----NKTRQLPIGRQ-AITALKSWLQQRGQ--LKCHDANALFINHRGQRMGVRGIQMRM 231 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A + PH RHS+A H+L + L+ +Q L+GH +IS+T+VYT + Sbjct: 232 ANMAATHG-------QHIHPHMLRHSFASHLLQSSGDLRAVQELLGHSNISTTQVYTHLD 284 Query: 242 ALDVAARHRVQFAMPESDAVAMLK 265 +A + P + LK Sbjct: 285 YQHLAKVYDKA--HPRAQEKTPLK 306 >UniRef50_UPI00019772C5 site-specific tyrosine recombinase XerC n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI00019772C5 Length = 334 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 89/294 (30%), Gaps = 71/294 (24%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 S A V +V S A A+ + D LP L + L+ V D Sbjct: 68 RSSMARKVVSVRSFFAWAH-EHGRIEADPAAVLMTPKLPDTLPSVLTEAQAERLMDRVDD 126 Query: 67 ---------------------------------------LHRKMLLATLWNTGARINEAL 87 L +L L+ TG R+ E + Sbjct: 127 DASLHAASSQRYETRHDEMPRLDSAHRGEGMSQRDEVVALRDAAMLELLYATGIRVAELV 186 Query: 88 ALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMV 147 L GD + V KQ R+VP D L Sbjct: 187 GLDIGDVDWSHRTIRVTGKGSKQ-------------------RVVPFGDP-AEKALAGWK 226 Query: 148 AQLKIPMERRNRRT-----GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 + + RR R + R VR + A + ++PH Sbjct: 227 EHGRPLILRRAGAGTLDTAALFLGMRGRRIDQRIVRDVVHRAARESGVP------DISPH 280 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 + RHS A HML G L+ +Q ++GH S+ +T+ YT V + R+R F Sbjct: 281 SLRHSAATHMLDGGADLREVQEMLGHSSLRTTQRYTHVSIEQLKERYRQAFPRA 334 >UniRef50_C5V602 Tyrosine recombinase XerC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V602_9PROT Length = 317 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 86/261 (32%), Gaps = 30/261 (11%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S + A ++ A + LP+ L + ++ Sbjct: 81 SSGLGGRSLARLLSAWRGFYNYLLRDHGFT-DNPCVGLRAPKSARALPQVLSPDQAVRMV 139 Query: 62 H----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 + K + +++G R+ E + L Sbjct: 140 DLPTDAPDSIRDKAMFELFYSSGLRLMELIDLDAESIRSD-----------------ITA 182 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R+ R+VPL +S L +A ++ + R AR ++ R V Sbjct: 183 GEVRVTGKGHKTRIVPLGG-CAISALHEWLA-VRPTLANIGER-ALFVGARGARISPRVV 239 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + + + + V PH RHS+A H+L + L+ +Q ++GH SIS+T+VY Sbjct: 240 QLRMKQWGIKQG-----ITSSVHPHMLRHSFATHVLQSSGDLRAVQEMLGHASISTTQVY 294 Query: 238 TKVFALDVAARHRVQFAMPES 258 T + ++ + + Sbjct: 295 THLDFQYLSKIYDAAHPRAKR 315 >UniRef50_A4TEB1 Tyrosine recombinase xerC n=10 Tax=Actinomycetales RepID=XERC_MYCGI Length = 300 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 88/259 (33%), Gaps = 35/259 (13%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 S A +V + ++ + + Q+ LP L + L Sbjct: 68 RSTLARRTSSVKTFTAW-AVRRGLIGDDPASRLQVPKARRTLPSVLRQDQARDALEAAES 126 Query: 67 ---------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 + ++++ L+ TG R++E L D + V Sbjct: 127 GAQQGDPLAVRDRLVVEMLYATGIRVSELCGLDVDDVDTSRRLLRV-------------- 172 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R VP + + L + + + + + AR + R Sbjct: 173 -----LGKGNKQRTVPYGEP-AHAALTAWLHEGRPALATADSGPALLLGARGKRLDPRQA 226 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 RT + + V+A + PH RHS A H+L G L+V+Q L+GH S+++T++Y Sbjct: 227 RTVVHQTVSAVGGAP-----DIGPHGLRHSAATHLLEGGADLRVVQELLGHSSLATTQLY 281 Query: 238 TKVFALDVAARHRVQFAMP 256 T V + A H Sbjct: 282 THVTVARLRAVHDQAHPRA 300 >UniRef50_Q87DN0 Tyrosine recombinase xerD n=57 Tax=Proteobacteria RepID=XERD_XYLFT Length = 324 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 48/236 (20%), Positives = 80/236 (33%), Gaps = 36/236 (15%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALLHYV-----PDLHRKMLLATLWNTGARINEA 86 L ++ LPK L ++ ALL L + +L ++ G R++E Sbjct: 112 NDNPSTLLAHPVLPHPLPKALTESQIEALLAAPSIETPEGLRNRAMLELMYAAGLRVSEL 171 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 + L + + RLVPL + LQ Sbjct: 172 VTLPVAMLNQRQGVLRITGKGG-------------------KERLVPLGEES-QHWLQRY 211 Query: 147 VAQLKIPMERRNRRTG-------RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPV 199 + Q + + + ++ + WI A V Sbjct: 212 LEQARPSLAADKPIPADSDGDVPLFINTNLKRLSRQQFWRWIKHYAALVGIA----PNKV 267 Query: 200 TPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAM 255 +PH RHS+A H+L G L+ LQ L+GH+SIS+T++YT + + H Sbjct: 268 SPHVLRHSFATHLLNHGADLRALQMLLGHRSISTTQIYTLIARQHLQQLHAQHHPR 323 >UniRef50_D0GL18 Tyrosine recombinase XerD n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GL18_9FUSO Length = 315 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 34/253 (13%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S + + + ++ + + L + + + LP+ L EV ++ Sbjct: 86 SRELKRNSVLRKIASIRTFYKFCYLNKMV-KEDPTGMIKSLKREKRLPEVLNLKEVKTII 144 Query: 62 H----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 + ++++ L TGAR++E L L D E Sbjct: 145 DNIGHTPEGMRDRLIIKFLIATGARVSEILNLNIKDV------------------ENQGY 186 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 ++ +R+VP+ +S ++++ ++ + ++ R Sbjct: 187 EFIKVLGKGSKYRIVPIYES-LENEIKDYISNYRPKLKGSESSFKLFPDTR-----RENF 240 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 + + A V PH FRHS A +L G ++++Q ++GH +IS+TE+Y Sbjct: 241 WKRLKKTAKDAG-----IEKNVYPHIFRHSVATVLLSNGADIRIVQEILGHANISTTEIY 295 Query: 238 TKVFALDVAARHR 250 T V D+ + Sbjct: 296 THVEKSDLKRIYN 308 >UniRef50_UPI0001973487 tyrosine recombinase XerD n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973487 Length = 287 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 32/236 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 + + M+ ++ + S I + + + + P L EV+ LL+ Sbjct: 68 ATISRMLASIKAFFHYESTEGYI-KRNPAEMIRAPKIEKKAPSILSVEEVTRLLNQPGGR 126 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + K +L L+ TG R++E + L ++ + + Sbjct: 127 TPKEIRDKAMLELLYATGIRVSELMNLNLHHINMTIGFITCSDSG--------------- 171 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R +P L + + + ++ +++ + I Sbjct: 172 -----RERTIPFGR-VAKKALDDYLKNSRPELTKKKESDWLFVNCSGGQMSRQGFWKIIK 225 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 A +TPHT RHS+A H++ +G +K +Q ++GH +++T++Y Sbjct: 226 YYGEKAG-----IQTDITPHTLRHSFAAHLISSGADMKAVQQILGHSDMATTQMYA 276 >UniRef50_Q1RHT1 Tyrosine recombinase xerD n=18 Tax=Rickettsieae RepID=XERD_RICBR Length = 305 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 27/262 (10%) Query: 3 GSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH 62 S+ + + S + + L + ++LP+ L ++ +LL Sbjct: 61 NSLQARSINRKISTIKSYYEFLISENHTNL-NPLLNIDLPKYQNKLPEILSIDDIKSLLE 119 Query: 63 ------YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAA 116 ++ L+ +G R++E ++L D L + + Sbjct: 120 YCSQDISPEGARLNAMIHLLYASGLRVSELVSLKLSDI-------------LSNKVSREV 166 Query: 117 RTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI--PMERRNRRTGRTEKARIWEVTD 174 + + R++ +++ S ++ +V + + +N A +T Sbjct: 167 KKIFSVLGKGNKERIIVINEPAINSLVKYLVVRDNFVNKTKPKNLIYLFPSSAAAGYMTR 226 Query: 175 RTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISST 234 + + A A + ++PH RHS+A H+L G L+V+Q L+GH IS+T Sbjct: 227 QNFAILLKSAALYAGLN----PEHISPHVLRHSFASHLLEGGADLRVIQELLGHADISTT 282 Query: 235 EVYTKVFALDVAARHRVQFAMP 256 ++YT + + + + Sbjct: 283 QIYTHLQTNHLKKAL-LHHPLS 303 >UniRef50_B8IZE7 Integrase family protein n=5 Tax=Desulfovibrionales RepID=B8IZE7_DESDA Length = 373 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 91/270 (33%), Gaps = 46/270 (17%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S A + A S + + A + P+ L E ALL Sbjct: 132 SSMARKLAAARSFFRF-QMRGGKVAENVAAQVRNPRQEKRHPRALNVDETFALLDSATGP 190 Query: 68 ------------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLK 109 L L+ +G RI+EAL+L D L+ V + Sbjct: 191 GGKRGPVAGSAEEERILCRDLALAELLYGSGLRISEALSLDVDDVQLSSRVLRVMGKGSR 250 Query: 110 QRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARI 169 RL PLSD+ + S L+ + + P+ AR Sbjct: 251 -------------------ERLAPLSDTSF-SCLKAWLEER--PLLALPDEAALFVGARG 288 Query: 170 WEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHK 229 + R + A + V+PH+ RHS+A H+L AG ++ +Q L+GH+ Sbjct: 289 ARLNRREAARIVERLCRRAG-----LTFTVSPHSLRHSFATHLLEAGADMRSVQELLGHQ 343 Query: 230 SISSTEVYTKVFALDVAARHRVQFAMPESD 259 +++T+ YT+V + + Sbjct: 344 RLTTTQRYTQVSLESLMQTYDQAHPRSGKR 373 >UniRef50_A9NHC9 Integrase/recombinase, XerD-like protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHC9_ACHLI Length = 306 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 94/263 (35%), Gaps = 34/263 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + ++ + I+ + + V LP + ++ L + Sbjct: 69 KTIARKLSSLKNFYNYLIFKELIE-ENIFSDIKAPKVAKTLPHIIDEEAINYLFDSIDTS 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 ++L L++ G R +E + L D L+ + Sbjct: 128 KPLGYRNLVILDLLYSCGVRASELINLEIKDIYLSSGQILIHGKG--------------- 172 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG---RTEKARIWEVTDRTVRT 179 + R + L + + +++ ++ +++ + + T + +T R +R Sbjct: 173 ----KKDRYIILHEK-LIEEIRHYLSFVRVTLLSKGDDTNQQKLFINYKGGPLTVRGLRV 227 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + + + + PH RH++A ML G L+V+Q L+GH+ + ST++YT Sbjct: 228 ILNQMIKDSGETYA-----IHPHMLRHAFATTMLNHGADLRVVQELLGHEHLKSTQIYTH 282 Query: 240 VFALDVAARHRVQFAMPESDAVA 262 V + ++ + + Sbjct: 283 VSKEQLKEKYMQTHPRNQHNEKT 305 >UniRef50_Q7NVH1 Tyrosine recombinase xerC n=1 Tax=Chromobacterium violaceum RepID=XERC_CHRVO Length = 299 Score = 220 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 83/259 (32%), Gaps = 35/259 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A + + + A LPK L +ALL + Sbjct: 64 RSLARRLSSWRQFYHWLQRNGERE-DNPAAGLYAPKRDKLLPKALPVDGTAALLDRIEGE 122 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + +++ G R++E +AL D + ++ Sbjct: 123 SELDARDRAIFELVYSCGLRLSETVALNLDDVDFSDSLLRIRGKGG-------------- 168 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 RLVP+ + L+T + + M+ + R V + Sbjct: 169 -----KERLVPIGAEAMLR-LRTWLGERSAGMD----EPALFLGRHGHRLGGRQVEKRLR 218 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A V PH RHS+A HML + L+ +Q L+GH ++SST++YT + Sbjct: 219 DWAIKTGA-----GQHVHPHMLRHSFASHMLQSSGDLRAVQELLGHANLSSTQIYTALDF 273 Query: 243 LDVAARHRVQFAMPESDAV 261 +A + Sbjct: 274 QHLAKVYDGAHPRARKRGK 292 >UniRef50_Q0W0L4 Integrase n=2 Tax=Euryarchaeota RepID=Q0W0L4_UNCMA Length = 278 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 38/223 (17%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRG 92 + + P YL E++ LL D ++++ L+ TG R++E + + + Sbjct: 92 SNPTRGINNIKLDKKAPVYLTVSEMNDLLDTAIDTRDRIIVRLLYATGVRVSELVNIRKK 151 Query: 93 DFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI 152 D V R+V L V ++ A L Sbjct: 152 DIDFDRCTIKV-------------------FGKGAKERIV-LVPETVVKEMYDYAASLSN 191 Query: 153 PMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHM 212 R++ +T RTV+ I + A + VTPH RHS+A HM Sbjct: 192 D-------------DRLFNLTPRTVQRDIKQLARRA-----KINKNVTPHKLRHSFATHM 233 Query: 213 LYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAM 255 L G + +Q L+GH S+++T++YT ++ + + Sbjct: 234 LQNGGNVVAIQKLLGHSSLNTTQIYTHYNVDELKEMYGRTHPL 276 >UniRef50_C0W1H5 Possible integrase/recombinase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1H5_9ACTO Length = 317 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 33/234 (14%) Query: 33 PAALALRQMSMVHDELPKYLLAPEVSALLH------YVPDLHRKMLLATLWNTGARINEA 86 A Q + LPK + E++A+L L L+ L+ TGARI E Sbjct: 105 ADPAAEVQQKKLGKHLPKAISLEEIAAMLEVAGQRPGPVGLRDVALIELLYGTGARITEV 164 Query: 87 LALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTM 146 + L+ D LA +P V ++ + RLVPL S+ V L+ Sbjct: 165 MNLSPDDLYLAGEFPHV-----------------KLFGKGRKERLVPLG-SFAVQALEDY 206 Query: 147 VAQLKIPMERRNRRT----GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 + + + + + R ++ ++ I + AA V+PH Sbjct: 207 LLLGRPLLLGKAKTRVAGHPLFLNKRGLSLSRQSAWEIISQTAVAAGCVS-----EVSPH 261 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 + RHS+A H+L G ++ +Q L+GH S+++T++YTKV + H + Sbjct: 262 SLRHSFATHLLEGGASIRDVQELLGHASVTTTQIYTKVSMNTLREVHALTHPRA 315 >UniRef50_Q1IMN8 Tyrosine recombinase XerD subunit n=3 Tax=Bacteria RepID=Q1IMN8_ACIBL Length = 313 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 92/272 (33%), Gaps = 39/272 (14%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S + A + + + L I++ L + LPK L A EV L Sbjct: 67 SNQLDGRTVARKLSSSRQFYKYLLLDRRIEHDPTLN-IESPRQWKVLPKSLSADEVLQTL 125 Query: 62 HYVPD-----------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQ 110 P L + +L + R++E + + D L Y V+ Sbjct: 126 QGPPRVLDTKESQALALRDRAMLEVFYAGALRVSEMIGVRMEDAKLDLGYMMVRGKGD-- 183 Query: 111 RTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIW 170 R+VPL S V +++ + + + Sbjct: 184 -----------------KERIVPLGQSALV-AVKSYLESGREVLCAGKTSPILFVGKGCR 225 Query: 171 EVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKS 230 +++ + V + A A+ +PH RHS A HM+ G L+ +Q+++GH Sbjct: 226 KLSRQRVWQMVSAASQASGR-------HASPHMLRHSCATHMVENGADLRTVQTILGHAD 278 Query: 231 ISSTEVYTKVFALDVAARHRVQFAMPESDAVA 262 IS+T++YT + + HR + Sbjct: 279 ISTTQIYTHLALDRLKQVHRTFHPRSKRRNAG 310 >UniRef50_A1UEH7 Tyrosine recombinase xerC n=24 Tax=Mycobacterium RepID=XERC_MYCSK Length = 300 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 88/264 (33%), Gaps = 35/264 (13%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 + + A AV + ++ + QM LP L + L Sbjct: 63 AAGTARTTLARRTSAVKTFTAW-AVRRGLMASDPATRLQMPKARRTLPAVLRQDQARDAL 121 Query: 62 HYVPD---------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRT 112 L ++++ L+ TG R++E L D + V KQ Sbjct: 122 DAANSGAQQGDPLALRDRLIVEMLYATGIRVSELCGLDIDDVDTSRRLLRVLGKGDKQ-- 179 Query: 113 EKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEV 172 R VP + L+ + + + AR + Sbjct: 180 -----------------RTVPFGEP-AEQALRAWLTSGRPALATAESGPALLLGARGRRL 221 Query: 173 TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSIS 232 R RT + E V A A + PH RHS A H+L G L+++Q L+GH +++ Sbjct: 222 DPRQARTVVHETVGAVAGAP-----DIGPHGLRHSAATHLLEGGADLRIVQELLGHSTLA 276 Query: 233 STEVYTKVFALDVAARHRVQFAMP 256 +T++YT V + A H Sbjct: 277 TTQLYTHVTVARLRAVHDQAHPRA 300 >UniRef50_A6TR58 Tyrosine recombinase XerD n=8 Tax=Clostridiales RepID=A6TR58_ALKMQ Length = 294 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 88/254 (34%), Gaps = 32/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSA-----LLH 62 S + + ++ S L +D L + + + P L EV L Sbjct: 68 STISRSLASLRSFYHYLLLHKKVDIDPTFNL-ESPKMVKKPPNILTLEEVELLLQQPLNT 126 Query: 63 YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + K +L L+ TG R+ E ++L D ++ Y T Sbjct: 127 TPKGIRDKAMLELLYATGIRVTELISLNLEDVNVNLGYIRCCNNT--------------- 171 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R++P+ + LQ + + + N +T + I Sbjct: 172 -----KERVIPIGTLSLI-ALQKYINYYRDAFTKDNEEKSLFLNYHGGRLTRQGFWKIIK 225 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 AA +TPHT RHS+A H++ G LK +Q ++GH IS+T+VY ++ Sbjct: 226 VYTKQAA-----IEKSITPHTLRHSFATHLIENGADLKSVQEMLGHSDISTTQVYAQLTK 280 Query: 243 LDVAARHRVQFAMP 256 + + Sbjct: 281 HKIKDVYNKTHPRA 294 >UniRef50_C4F8T8 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8T8_9ACTN Length = 308 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 88/259 (33%), Gaps = 38/259 (14%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP--- 65 A + A+ S + LA ELP L A E++AL Sbjct: 77 TVAAHLSALRSFFRWLEYSGHRAGAVPLATV-APKQRRELPHVLTAEELAALFDAPDLSC 135 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L +L TGARI+E L GD +A + Sbjct: 136 PVGLRDAAMLELFIATGARISELSRLELGDVCVAERQVC-------------------LL 176 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTG-----RTEKARIWEVTDRTVR 178 R+VPL + + + + + + R G R + +R Sbjct: 177 GKGSKERIVPLY-ARAIEVYERYLENGRPNLLRAPALGGDACRAVFVSDRGRAMNSDALR 235 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 A S +TPH RH++A +L G L+ +Q L+GH S+S+T++YT Sbjct: 236 YRFDVLKRKAG-----ISSDITPHAMRHTFATELLGGGADLRSVQELLGHASLSTTQIYT 290 Query: 239 KVFALDVAARHRVQFAMPE 257 + + + V A P Sbjct: 291 HLTPDRLKS--AVARAHPR 307 >UniRef50_Q02C57 Phage integrase family protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C57_SOLUE Length = 303 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 91/256 (35%), Gaps = 38/256 (14%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL- 67 + AV + L + L + +LP+ + A +V++L+ V + Sbjct: 78 TLRRKLAAVRGLFRFL-LREGVVPLNVACLVRTPKAPKKLPEVMTADQVNSLIDGVGGVE 136 Query: 68 -------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 + + L+ G R++E L D + V+ Sbjct: 137 LERPHPARDRAIFELLYGCGIRVSELAGLNLEDIDRTEGWLRVRGKG------------- 183 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 + R VPL L+ +A+ + + R +T R + Sbjct: 184 ------KKERQVPLPGQAA-QSLERYLAERPV----AREQPAVFVNHRRARLTTRGISGI 232 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + D + PH+FRH+YA H+L G L+ +Q L+GH +S+T+ YT+V Sbjct: 233 VKLYATYLSNDPG-----IHPHSFRHAYATHLLADGADLRAIQELLGHARLSTTQKYTQV 287 Query: 241 FALDVAARHRVQFAMP 256 D+ A + Sbjct: 288 SLTDLMAVYDKAHPKA 303 >UniRef50_UPI000178962A integrase family protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178962A Length = 294 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 89/254 (35%), Gaps = 32/254 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S ++ S Q + A+ L + PK L +V LL Sbjct: 68 SSLLRCTASLRSFFQYL-VRQAVIVQDPTQLLDNPKPERKPPKSLTVEQVDKLLSAPDSG 126 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 K +L L+ +G +++E + L+ D L + ++ Sbjct: 127 TPQGARDKAMLELLYASGIKVSELVNLSIHDIHLEMRFLRCAVSGG-------------- 172 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R++P++ + V ++ + R + +T + I Sbjct: 173 -----KERILPIT-PIAAESVAFYVRDMRDKLMRDAGEDALFLNSLGTRLTRQGFWKIIK 226 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + A D +TPHT RHS+AMH+L G L+ +Q ++GH ++S+T +Y + Sbjct: 227 KYGKLAGID-----EDITPHTLRHSFAMHLLGNGADLRSVQEMLGHSALSTTGMY-QSAK 280 Query: 243 LDVAARHRVQFAMP 256 + + Sbjct: 281 KSMKEVYDHYHPRS 294 >UniRef50_D2LQ39 Integrase family protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LQ39_9EURY Length = 284 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 34/251 (13%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 M S S + A + +D L+ ++PKYL EV L Sbjct: 61 MYLSTKRKYSKNSLYLATKAIRSYFKYKNLDTAKNLS---SPKRPRQMPKYLSEDEVKRL 117 Query: 61 LHYV-PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTA 119 + + +++ L +G R++E L D +V Sbjct: 118 IEASSENPRDYAIISLLAYSGLRVSELCNLKIEDVDFNERIVYVH--------------- 162 Query: 120 GRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRT 179 R+V + + LQ + + ME + +++ V Sbjct: 163 ---SGKGDKDRIV-VVSPRVIEALQNYLYTREDDME------YLFASQKSNKISRVQVFR 212 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + A VTPH RH+ A +L G+ ++ +Q +GH S+++T++YT Sbjct: 213 IVKKYAEKAG-----IKKEVTPHVLRHTLATTLLRRGVDIRFIQQFLGHSSVATTQIYTH 267 Query: 240 VFALDVAARHR 250 V + + + Sbjct: 268 VDDALLKSVYD 278 >UniRef50_C0AAZ7 Integrase family protein n=2 Tax=Bacteria RepID=C0AAZ7_9BACT Length = 329 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 84/263 (31%), Gaps = 42/263 (15%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 V + S + L L + + LPK+L ++ LL Sbjct: 96 RRTLHNHVSGLRSFYKYW-LRHGRVSRNPLVGLALPKLEKRLPKFLTEQQMKLLLSGPQR 154 Query: 67 L-------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTE 113 L ++ + L+ G R++E AL G V Sbjct: 155 LLDNVADITPFTAWRDRLAMELLYGGGLRVSELTALDYGQIDFTSGVARV---------- 204 Query: 114 KAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVT 173 + RL PL L +V + + Sbjct: 205 ---------LGKGRKERLCPLGKV----ALAVLVKWKNEYARDTSPAAPVLVTPEHERMP 251 Query: 174 DRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISS 233 R V+ + +A A ++PH RHSYA H+L AG L+++Q L+GH S+++ Sbjct: 252 VRQVQLMLKRYLALAG-----LPTDLSPHKLRHSYATHLLNAGADLRLVQELLGHASLNT 306 Query: 234 TEVYTKVFALDVAARHRVQFAMP 256 T++YT V + + Sbjct: 307 TQIYTHVSIARLRDIYDKAHPRA 329 >UniRef50_C5SKT5 Integrase family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SKT5_9CAUL Length = 304 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 95/261 (36%), Gaps = 33/261 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S AV + D + LPK L EV AL+ Sbjct: 68 STLQRKRAAVRQFYRFCVREGLSDND-PSRKIAAAKKGRPLPKILSRQEVDALIAAADAK 126 Query: 67 -----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + L+ + +G R++E +AL P Y V+ Sbjct: 127 DAHQATRLQCLIEIAYASGMRVSEIVALRLDAVQKDPAYLIVKGKGG------------- 173 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARI--WEVTDRTVRT 179 T RLVPL + + ++ + + + +++ +R +T R V Sbjct: 174 ------TERLVPL-NPSARAAIKDYLDIRPLFLNAKDKANPYLFCSRGAEGHLTRRRVGQ 226 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + EA A D V+PH RH++A H+L G L+V+Q+L+GH IS+T+VYT Sbjct: 227 LLDEAALEAGID----PARVSPHVLRHAFATHLLEGGADLRVVQTLLGHADISTTQVYTH 282 Query: 240 VFALDVAARHRVQFAMPESDA 260 V + + + A Sbjct: 283 VATERLKEVVETHHPLSKRRA 303 >UniRef50_D0LHX4 Integrase family protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHX4_HALO1 Length = 395 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 90/304 (29%), Gaps = 76/304 (25%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 + A + A+ S A+D + LP+ L + L+ Sbjct: 81 ATMARKLSALRSFFAFLVQRGALDN-NPARGVRSPKRRKALPRALDVDDAFRLIEAPTRA 139 Query: 67 -------------------------------------------------LHRKMLLATLW 77 L + + L+ Sbjct: 140 PASGADAAAASPARNVGRSGGRSANRAGATGTASAGKNKRAKTSREPLKLRDRAIAEVLY 199 Query: 78 NTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDS 137 +G R+ E AL D R ++ R+VPL Sbjct: 200 GSGLRVGECCALDLDDID---------------RARLSSALVRVRRGKGGKERIVPLGRQ 244 Query: 138 WYVSQLQTMVAQL---KIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVT 194 V+ L + + P R +T R+V+ IG A Sbjct: 245 -AVAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRNAQEVGAYEA- 302 Query: 195 FSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 TPH RHS+A H+L +G+ L+ +Q L+GH S++ST++YTKV + + Sbjct: 303 -----TPHALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVYDASHP 357 Query: 255 MPES 258 + Sbjct: 358 RARA 361 >UniRef50_Q0ACL7 Tyrosine recombinase XerC n=4 Tax=Gammaproteobacteria RepID=Q0ACL7_ALHEH Length = 304 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 83/257 (32%), Gaps = 33/257 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 + ++ S + + LP L E + LL P+ Sbjct: 72 SVQRTLSSLRSLFRYLVREGRLTG-NPAEGVAAPRRPRRLPGVLSPDEAARLLEGSPEDD 130 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + L ++++G R+ EA+ L G L V Sbjct: 131 PLALRDRALYELIYSSGLRLAEAVGLDLGRLDLTEGLVEVVGKG---------------- 174 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R VP+ LQ +A P R ++ R+V+ + Sbjct: 175 ---AKTRRVPVGGK-AREALQAWLAVR--PALAGADEPAVFVSQRGGRLSARSVQARLAR 228 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 + PV PH RHS+A H+L + L+ +Q L+GH I++T+VYT + Sbjct: 229 LATLSGV-----GRPVHPHMLRHSFASHLLESSGDLRAVQELLGHADIATTQVYTHLDFQ 283 Query: 244 DVAARHRVQFAMPESDA 260 +A + Sbjct: 284 HLARVYDQAHPRARKGG 300 >UniRef50_Q0AFS1 Tyrosine recombinase XerC subunit n=6 Tax=Betaproteobacteria RepID=Q0AFS1_NITEC Length = 321 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 84/263 (31%), Gaps = 34/263 (12%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL 61 S + A M+ A + + ++ +LP L E + LL Sbjct: 82 SSGLSGRSLARMLSAWRGFYRYL-IRHHHHNGNPCLDVRVPKSPHKLPHALSPDEAAQLL 140 Query: 62 ------HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKA 115 + + + +++G R+ E L D V Sbjct: 141 TFNPSSNDMLATRDLAIFELFYSSGLRLTELTQLQPTDIDFTGGTVRVTGKG-------- 192 Query: 116 ARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDR 175 R+VP+ + + LQ + + T R + R Sbjct: 193 -----------NKTRIVPVGE-LALRALQAWLPLRSAWLI--PGETALFLSQRGRRIHPR 238 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 T+ + + D V PHT RHS+A H+L + L+ +Q ++GH SI ST+ Sbjct: 239 TIAYRLHQRAQLQNLDS-----RVHPHTLRHSFASHLLQSSGDLRAVQEMLGHSSIRSTQ 293 Query: 236 VYTKVFALDVAARHRVQFAMPES 258 VYT + +A + Sbjct: 294 VYTHLDFQHLAKIYDQAHPRARK 316 >UniRef50_A1ZPB9 Tyrosine recombinase XerD n=4 Tax=Bacteroidetes RepID=A1ZPB9_9SPHI Length = 299 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 89/254 (35%), Gaps = 30/254 (11%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL-----H 62 S A ++ + + + L I+ ++ + ++P L E+ LL Sbjct: 71 SSQARILSGIKAFYKYLMLEETIERDPSVN-VHTPRIDRKIPDVLSLQEIEDLLAVIDLS 129 Query: 63 YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + ++ L+++G R+ E + L + L + + Sbjct: 130 TPEGARNRAMIEVLYSSGLRVTELIELKISNLYLDIGFLRIIGKA--------------- 174 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 R VP+ + + + N R +++ V I Sbjct: 175 ----NKERFVPIGREAARYLISYIENIRSNVPVKPNNEDFVFLNRRGTKISRVMVFMIIK 230 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 E A ++PHTFRHS+A H++ G +K +Q ++GH++I++TE+Y ++ Sbjct: 231 EVALLA-----DIKKNISPHTFRHSFATHLILGGANIKAVQEMLGHENITTTEIYKRLDQ 285 Query: 243 LDVAARHRVQFAMP 256 + Sbjct: 286 DILRQTLLEFHPRS 299 >UniRef50_A8F7B4 Tyrosine recombinase xerC n=1 Tax=Thermotoga lettingae TMO RepID=XERC_THELT Length = 286 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 33/241 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH-Y 63 + + A + ++ S L +I + + + +P +LL E+ LL Sbjct: 66 LNSTSLARKISSLRSFFNYLQL-TSIKDENPVEGIRNPKIRRRIPDFLLPSEIQKLLEFS 124 Query: 64 VPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + + ++L+ L+ G R++E L D S +P + + Sbjct: 125 MKNQRDYLMLSLLYFCGLRVSELCNLRVEDLSFSPAFVKIT------------------M 166 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 + R+VPL+ L+ + ++ ++ TV + + Sbjct: 167 GKGKKDRIVPLTSKLAEK-LENYITSC-----GKSPEDYLFGSQ--IKIHPSTVFRIVRK 218 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 + PHT RH++A H+L G+ ++V+Q L+GH ++S+T VY V Sbjct: 219 YTMMCG-----IKKRIHPHTLRHTFATHLLQKGVNIRVVQDLLGHSNLSTTSVYLHVVDQ 273 Query: 244 D 244 + Sbjct: 274 E 274 >UniRef50_UPI0001C31AAB integrase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AAB Length = 313 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 89/253 (35%), Gaps = 28/253 (11%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD-- 66 + ++ S + + L LP L EV+ALL +P Sbjct: 84 TVGRKLASLRSLFRTLVEHGELQ-QNPADLLSAPRKAQRLPYVLKPVEVAALLDRIPADT 142 Query: 67 ---LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 L + L + +G R E + L G V+ Sbjct: 143 ALALRDRALFELAYASGLRAEELVMLDVGSIEFDGERVRVEGKG---------------- 186 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R+VP + + + + + + + ++ VR + Sbjct: 187 ---AKTRIVPAGEP-ALKAIARYLDRARPALATAESDGALFLSKSGRRLSTSDVRRRLRV 242 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 AA GV+ + V+PH RHS+A H+L G L+ +Q L+GH SIS+T+VYT+V + Sbjct: 243 WARQAA--GVSTAGGVSPHALRHSFATHLLENGADLRSIQELLGHASISTTQVYTRVESA 300 Query: 244 DVAARHRVQFAMP 256 + + + Sbjct: 301 RLRSAYANSHPRA 313 >UniRef50_UPI000185BEBB tyrosine recombinase XerC n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEBB Length = 304 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 82/256 (32%), Gaps = 39/256 (15%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 S A + ++ +D +L L H LP+ L +V + V Sbjct: 82 RSSLARLTTSIRQFCSWLVARQILDADPSLRL-STPKKHQHLPEVLSPEKVEEAIEKVSS 140 Query: 67 ------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 ++ L+ TG R+ E D + + V KQ Sbjct: 141 EDSAVAARDLAIVELLYATGMRVEELCKADVSDVNFSRHIISVVGKGDKQ---------- 190 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 R+VP + L+ + R + R R Sbjct: 191 ---------RIVPFGAP-AEAALKGWLQVRGNFPASAQAEHALFLGVRGGRLNPRQARRV 240 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 I + V+PH RHS A M+ G L+V+Q ++GH S+++T++YT V Sbjct: 241 IHKWA------------DVSPHALRHSAATAMVEGGADLRVVQEMLGHSSLATTQIYTHV 288 Query: 241 FALDVAARHRVQFAMP 256 A + H+ Sbjct: 289 SADRLREVHKRAHPRA 304 >UniRef50_A2U2P8 Phage integrase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2P8_9FLAO Length = 385 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 86/236 (36%), Gaps = 36/236 (15%) Query: 13 MVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKML 72 + A+ D +LP L EV ++ +L + + Sbjct: 159 FISALKIFTNYYPSTKINDIE-----LTRPKKSKKLPSVLSQEEVLRIISVTTNLKHRAI 213 Query: 73 LATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLV 132 +A L++ G RI+E + L DF + V+ + R V Sbjct: 214 IALLYSCGLRISELINLKLKDFHIERKQLIVK------------------SGKGRKDRYV 255 Query: 133 PLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADG 192 L++S+ + + E + + +VR ++ ++ A Sbjct: 256 SLAESFMPLLKNYYYSY--------EPKEFFVEGMNGEKYSASSVRAFLKKSCKKAGIQR 307 Query: 193 VTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR 248 VTPHT RHSYA H+L G+ ++ +QSL+GH +T +YT V D+ Sbjct: 308 A-----VTPHTLRHSYATHLLENGVDIRYIQSLLGHSRPETTMIYTHVKRKDLMQI 358 >UniRef50_B3QM22 Tyrosine recombinase xerC n=10 Tax=Chlorobiaceae RepID=XERC_CHLP8 Length = 336 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 96/279 (34%), Gaps = 51/279 (18%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 + + A + +V S + L + L+L + ++P+++ E L Sbjct: 82 LDKGIQPRSIARKLASVKSFYRFL-LETGRISSSPLSLVVTPRLDKKVPRFVSEEEARQL 140 Query: 61 LH---------------------YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 + +L L+ G R++E +AL R D L Sbjct: 141 FRRFESQEDNAALQGDGKKAEVRQFETFRDRAVLEVLYGCGLRLSELIALERADVDLVHG 200 Query: 100 YPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKI----PME 155 + V + R+VPL + V L+ + P+E Sbjct: 201 FLKVTGKG-------------------RKQRIVPLGEP-AVEALRKYFEVRRNFFRIPLE 240 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 R + +R R + + + + V+ S PH RHS+A HML Sbjct: 241 RTGESSRVFVTSRG-----RQLYPMLVQRMTKRYLTPVSESEKKNPHILRHSFATHMLNG 295 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFA 254 G LK + ++GH S+++TE+YT V + + Sbjct: 296 GADLKSVSEMLGHSSLTTTELYTHVTFSRLKEIYDKAHP 334 >UniRef50_A9FAZ0 Integrase/recombinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FAZ0_SORC5 Length = 358 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 90/263 (34%), Gaps = 31/263 (11%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 + A V A + + +D A A + V LP +L + ++ Sbjct: 119 ASIARKVGAARALLRYLERRGEVDK-NAAAQLALPKVRRPLPTFLDVDAAAEVMEIPGAE 177 Query: 63 YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + +L TL+ G R++E L A R A R+ Sbjct: 178 TAEGLRDRAMLETLYGAGLRVSELCGLDLTHVD----------------RRPADRAAVRV 221 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKI---PMERRNRRTGRTEKARIWEVTDRTVRT 179 R+VPL S ++ ++ + + P R + R V+ Sbjct: 222 VGKGDKERIVPLG-SHALAAIERYLERRDELADPTTGARDPRALFLSRRGARIGVRRVQA 280 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + A A + PH RH+ A H+L G L+ +Q L+GH S+++T+ YT Sbjct: 281 LVQRYGALGAGRA-----DLHPHALRHTCATHLLDGGADLRAIQKLLGHASLATTQRYTH 335 Query: 240 VFALDVAARHRVQFAMPESDAVA 262 V + + M A Sbjct: 336 VSIDHLLKVYDAAHPMARKRGPA 358 >UniRef50_C1ABE3 Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABE3_GEMAT Length = 324 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 93/266 (34%), Gaps = 43/266 (16%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV--- 64 A + AV S + +D + LP YL + L+ + Sbjct: 85 RSIARQLSAVRSFYRWMHRDERVD-VNPARAVGSPKLPRTLPAYLDRTQAETLMQHAATR 143 Query: 65 ------PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 D+ +L +++G R++E + D L V+ Sbjct: 144 AQSLEFTDVRNLAMLELFYSSGLRLSELRGVDLADLDLVSQQVKVRGKG----------- 192 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNR--------RTGRTEKARIW 170 + R+VPL D L+ + + + + + R R Sbjct: 193 --------RKERIVPLGD-HAQRALRNYLVKRDALIAQASGGAVGRRVARGAVFLSERGA 243 Query: 171 EVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKS 230 ++ R V+ + + V+ +T H+ RH++A H++ AG L+ +Q L+GH S Sbjct: 244 RISARAVQHAMVTLM-----SAVSEGADLTTHSLRHTFATHLVDAGADLRAVQELLGHAS 298 Query: 231 ISSTEVYTKVFALDVAARHRVQFAMP 256 IS+T++YT + +R Sbjct: 299 ISTTQIYTHTSVDRLKKVYRQAHPRA 324 >UniRef50_C7R6T2 Tyrosine recombinase XerC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6T2_KANKD Length = 299 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 32/256 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 S SA+ + A+ + I + LPK + ++ L +P+ Sbjct: 68 SSSALQLSAMRRFLEFLLSEKKIT-VNPAVGVRGPKKAKRLPKNIDVDSLNHFLDQMPED 126 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + K ++ L+++G R+ E A+ D S + V K R ++ ++ Sbjct: 127 EPIEVRDKAMMELLYSSGIRLAELSAMDIDDLSFSDQSLRVLGKGNKVREVPFGNSSKKV 186 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R + + + +T+R ++ + Sbjct: 187 LSLWLKER---------------------NNFAKNSDEKALFLSQQGNRLTNRAIQQRLA 225 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + PH RHS A H+L + L+ +Q L+GH SIS+T++YT + Sbjct: 226 HWGKKLG-----LNDRLHPHKLRHSCATHVLESSSDLRAVQELLGHASISTTQIYTHLDF 280 Query: 243 LDVAARHRVQFAMPES 258 +A + Sbjct: 281 QHLAKTYDAAHPRARK 296 >UniRef50_A7NFG3 Tyrosine recombinase xerC n=6 Tax=Chloroflexi (class) RepID=XERC_ROSCS Length = 314 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 95/266 (35%), Gaps = 37/266 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 S A V AV S + + V +LP+ L +V LL Sbjct: 68 STVARRVAAVKSFFTFLTGRGIVQRD-PTERIDSPKVDRDLPRALTPRQVDELLELPLRS 126 Query: 63 -YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 + K +L L+ TG R++E +AL D L + Sbjct: 127 PTPERIRDKAMLELLYATGVRVSELVALNVNDVDLERNEVRCIGKNGRV----------- 175 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT--GRTEKARIWEVTDRTVRT 179 R++P++ S L+ + + R + + R +T + Sbjct: 176 --------RVLPINGSAAT-ALEEYFDISRNQLARGSGSSTEALFLNHRGKRLTRQGFWL 226 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 + + +TPH RHS+A+HML AG L+ +Q L+GH SIS+T++YT Sbjct: 227 ILKQYAEELGLS------DLTPHVLRHSFAVHMLNAGFDLRAVQELLGHTSISTTQIYTH 280 Query: 240 VFALDVAARHRVQFAMPESDAVAMLK 265 + H P + V ++ Sbjct: 281 LNHESSHTPH--AHPAPRASEVNGVR 304 >UniRef50_Q1IMN9 Tyrosine recombinase XerC subunit n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMN9_ACIBL Length = 300 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 90/255 (35%), Gaps = 32/255 (12%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHY-VPDL 67 A + A+ S + + AL + +LP+ E++ ++ +P+ Sbjct: 70 SVARALAALRSLYKWLAR-EGFVEQNPAALVATPKLPKKLPRVPTMEELNTVMDAEMPEA 128 Query: 68 -----HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 ++ L+ G R +E + D + ++ Sbjct: 129 ASFPERDALIFELLYGCGIRNSELTGINLDDIRWSNEAILIRGKG--------------- 173 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKAR-IWEVTDRTVRTWI 181 + R VP D+ V+ + + I ER R + +T R+V + Sbjct: 174 ----KKERFVPFGDAAAVAAKVYLKKRQDILAERHKSTNALLINLRDVQRLTSRSVGRIV 229 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 + A V PHT RH++ H+L G L+ +Q L+GH+ +++T+ YT++ Sbjct: 230 KKIAVARG-----LPADVHPHTLRHAFGTHLLEEGADLRAIQELLGHERLATTQRYTQLS 284 Query: 242 ALDVAARHRVQFAMP 256 V + Sbjct: 285 TRHVLEVYDKTHPRA 299 >UniRef50_Q0F1F3 Tyrosine recombinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1F3_9PROT Length = 298 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 30/231 (12%) Query: 32 YPAALALRQMSMVHDELPKYLLAPEVSALL---HYVPDLHRKMLLATLWNTGARINEALA 88 A + LP+ L + +AL+ H D LLA ++ G R++EA+ Sbjct: 93 PANVAAGVRPPKKSARLPRTLPPEQTAALMQPTHASADRRDLALLAVMYGAGLRVSEAVG 152 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L D L V KQ R+VPL + L + Sbjct: 153 LDLHDIDLHSCELRVLGKGSKQ-------------------RIVPLP-TTAADLLGQWLD 192 Query: 149 QLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSY 208 + + + R R +T R+V+ + + AD + VTPH RHS+ Sbjct: 193 ERLLGLVRDER--AVFLNRFGQRLTARSVQRMLKTRALESGAD-----ISVTPHRLRHSF 245 Query: 209 AMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESD 259 A H+L G+ L+ +Q L+GH S+++TE YT + + + Sbjct: 246 ATHLLAGGVDLRAIQELLGHASLATTERYTHLDIAKLTEVYDRSHPRAGRR 296 >UniRef50_C4L615 Integrase family protein n=2 Tax=Exiguobacterium RepID=C4L615_EXISA Length = 293 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 81/255 (31%), Gaps = 36/255 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S + V G+ + LP + + EV LL Sbjct: 67 STVSQKVSCFKQFGKFMAREQG--GEPLFHDLTSPKKKQSLPTFAVPTEVEQLLEAASRQ 124 Query: 68 -------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG 120 ++ L+ TG R+ E + F + V Sbjct: 125 DDPFLQARDVAIIEVLYGTGIRVAELCGMNLSSFDEVLSFVHVMGKG------------- 171 Query: 121 RMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTW 180 + R VP+ + V LQ + K T + +T +R Sbjct: 172 ------KKERYVPIG-QYAVQALQRYIELRK--GVGLPTETALFLSQKGNRMTTDQIRYV 222 Query: 181 IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV 240 + + P+TPH+ RHS+A +L G L+ +Q L+GH+S+S+T YT V Sbjct: 223 MKRLRKDSGV-----HKPLTPHSLRHSFATDLLERGADLRAVQELLGHESLSTTGRYTHV 277 Query: 241 FALDVAARHRVQFAM 255 + + ++ Sbjct: 278 STERLRSIYQATHPR 292 >UniRef50_A0L4T4 Tyrosine recombinase XerC subunit n=2 Tax=Bacteria RepID=A0L4T4_MAGSM Length = 335 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 80/248 (32%), Gaps = 44/248 (17%) Query: 34 AALALRQMSMVHDELPKYLLAPEVSALLHY--------------------VPDLHRKMLL 73 A LP+ + LL + L LL Sbjct: 99 NPAAAVSSPKAPKRLPRAPSVEQTLNLLDKSTPRPLSPEASDFDTSAWAVLRSLRDTALL 158 Query: 74 ATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVP 133 L++ G RI+EA L R D L V+ R+VP Sbjct: 159 ELLYSAGLRISEACNLDRADVDLRGGELRVR------------------HGKGGKQRMVP 200 Query: 134 LSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGV 193 L V+ ++ + + + + R + + + A + Sbjct: 201 LGR-TAVAAIEAWLQARTRAKPQLDPMGPIFTGQLGKRLNSREGQRLLEKWRAR-----L 254 Query: 194 TFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQF 253 VTPH RH++A H+L AG L+ +Q +MGH S+S+T+ YT + +A + Sbjct: 255 DLPESVTPHALRHAFATHLLQAGADLRAIQEMMGHASLSATQKYTHLDMQALAKVYDAAH 314 Query: 254 AMPESDAV 261 + Sbjct: 315 PRAQRRTP 322 >UniRef50_C8WGZ0 Integrase family protein n=4 Tax=Coriobacteriaceae RepID=C8WGZ0_EGGLE Length = 323 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 89/263 (33%), Gaps = 40/263 (15%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALL----- 61 + + A+ S + ++ D ++ Q LP + A ++ LL Sbjct: 86 RTTVNRRLSALRSFFRWLNVTGIAD-EDPASILQGPKQPKSLPHVIRASDMVKLLTVYGK 144 Query: 62 ---------HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRT 112 D LL L+ GAR++EA L + V Sbjct: 145 RDAAGREREQSSVDARNLALLEFLYACGARVSEASGLLAANVDFGSGQVKVFGKGS---- 200 Query: 113 EKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEV 172 R+VPL D VS ++ + + R R + Sbjct: 201 ---------------KERIVPLHD-MAVSSMRAYATWARPLILRDRTCDYFFVSTRGNRM 244 Query: 173 TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSIS 232 +R +A+ A D ++PH RH++A +L G L+ +Q ++GH S+S Sbjct: 245 GTDAIRKMFKDALRQAGLD-----ESLSPHDMRHTFATDLLDGGADLRSVQEMLGHASLS 299 Query: 233 STEVYTKVFALDVAARHRVQFAM 255 +T++YT + + H Sbjct: 300 TTQIYTHLSPGRLKQVHARTHPR 322 >UniRef50_B4S5H6 Integrase family protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S5H6_PROA2 Length = 335 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 88/276 (31%), Gaps = 42/276 (15%) Query: 1 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL 60 + + A + AV S A+ + +P +L E L Sbjct: 82 LEKGLQPKSIARKLAAVKSFYNYLLETGAVKVSVP-SQVITPRFSKPVPGFLSERETEKL 140 Query: 61 LHYVPDL--------------------HRKMLLATLWNTGARINEALALTRGDFSLAPPY 100 + L + LL L+ G RI+E + L + +L Sbjct: 141 FDELLSLPAPGEALGAVRAGDGGFTYARDRALLEVLYGCGLRISEVIGLQYENVNLQDSL 200 Query: 101 PFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRR 160 V KQ R+VPL + L+ + +N Sbjct: 201 LRVSGKGGKQ-------------------RIVPLGGP-ARTALRNYFEVRRNFFRMKNEE 240 Query: 161 TGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLK 220 + + + R + + + V VT PH RHS+A HML +G LK Sbjct: 241 SPDASYVFVTKKGRR-IYPVLVQRVTRKYLSAVTEIKYKNPHVLRHSFATHMLNSGADLK 299 Query: 221 VLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMP 256 + ++GH ++++TE+YT V + + Sbjct: 300 SVSEMLGHTNLTTTEIYTHVTFGRIKEVYLKAHPKA 335 >UniRef50_B6WSE8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSE8_9DELT Length = 327 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 88/269 (32%), Gaps = 47/269 (17%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S A + A + + + A + P+ L + A+L L Sbjct: 87 STMARKLAAARTFFRYQQRMGRTEN-NVAAQVRNPKQEQRHPRVLNVDQAFAVLDTPDAL 145 Query: 68 ------------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLK 109 L L+ +G RI+EAL L D L V Sbjct: 146 AGTGSPRIPPATGDALAARDHALAELLYGSGLRISEALGLDVTDLRLDESVVRV------ 199 Query: 110 QRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARI 169 R+ PLSD+ V+ L+ + Q AR Sbjct: 200 -------------FGKGARERMSPLSDTS-VTALRAWLEQRGT--LAPEGEKALFVGARG 243 Query: 170 WEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHK 229 + R I A + PV+PH RHS+A H+L AG L+ +Q L+GH+ Sbjct: 244 GRLDRREAMRRIERLCRNAGVE------PVSPHALRHSFATHLLDAGADLRSVQELLGHQ 297 Query: 230 SISSTEVYTKVFALDVAARHRVQFAMPES 258 +++T+ YT+V + + + Sbjct: 298 RLTTTQRYTRVSLERLMHLYDEAHPRAQK 326 >UniRef50_Q2J882 Tyrosine recombinase XerD n=15 Tax=Bacteria RepID=Q2J882_FRASC Length = 443 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 26/195 (13%) Query: 62 HYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGR 121 V L LL L+ TGARI+EA+ L D L + Sbjct: 244 EAVRRLRATALLELLYGTGARISEAVGLDVDDLDLEAASVRLHGKGG------------- 290 Query: 122 MPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWI 181 R+VPL + ++ + + + + R ++ ++ + + Sbjct: 291 ------RDRIVPLGR-YAIAAVADYLRVGRPTLVAPRSGPAVFLSRRGNRLSRQSAWSVL 343 Query: 182 GEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF 241 A AA +G V+PH RHS+A H+L G ++V+Q L+GH S+S+T++YT V Sbjct: 344 RTAALAAGVEG------VSPHVLRHSFATHLLDGGADVRVVQELLGHASVSTTQIYTLVT 397 Query: 242 ALDVAARHRVQFAMP 256 + + Sbjct: 398 VDRLREVYAASHPRA 412 >UniRef50_B0B7R6 Tyrosine recombinase xerC n=8 Tax=Chlamydia RepID=XERC_CHLT2 Length = 315 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 86/253 (33%), Gaps = 32/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + A+ S + I + + + ELP L +V AL+ Sbjct: 86 RTVRRRLSAIKSFARFCVKNQLI-PENPAEMIRGPRLPQELPSPLTYEQVLALMAAPELD 144 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + LL +++G RI+E AL R D ++ Sbjct: 145 KVTGFRDRCLLELFYSSGLRISEITALNRADIDFQSHLLHIRGKG--------------- 189 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R+VP++ V LQ + ++ ++ R++ Sbjct: 190 ----KKERIVPMT-KVAVQWLQDYLNHPDRASVEQD-HQACFLNRFGKRLSTRSIDRKFQ 243 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + G +TPHT RH+ A H L G+ LK +Q L+GH S+ +T +YT V Sbjct: 244 QYLLKTGLSGS-----ITPHTIRHTIATHWLERGMDLKTIQLLLGHTSLETTTIYTHVSM 298 Query: 243 LDVAARHRVQFAM 255 H Sbjct: 299 KLKKQIHDETHPH 311 >UniRef50_A6G048 Site-specific recombinase, phage integrase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G048_9DELT Length = 346 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 96/265 (36%), Gaps = 35/265 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S + A+ + + I +AL + + +LP L +++ ++ Sbjct: 69 STVGRKLSALRTFAEYCRREGWI-AENEVALMRRPKLGRKLPVALPVEDLTEMIDGEQRP 127 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + LL L+ G R++EA+AL D + R + Sbjct: 128 GAVGLRDRALLEVLYGAGLRVSEAVALNLADLRWE-------GSGDAARLTLRV-----L 175 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRT-----------GRTEKARIWE 171 R+VPL ++ + + + R AR Sbjct: 176 QGKGNKDRVVPLGRKGA-EAMRAWLDTREGLLAPTPREGMRSPARIDAGKAVFLGARGGR 234 Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 ++ R R + A+ A V V PH RHS+A H+L +G L+ +QS++GH S+ Sbjct: 235 LSTRVAREVVYRRCQASGARAV-----VGPHGLRHSFATHLLQSGCDLRSIQSMLGHASL 289 Query: 232 SSTEVYTKVFALDVAARHRVQFAMP 256 S+T+ YT + + + + Sbjct: 290 STTQRYTHLDMGHLFSLYERAHPRA 314 >UniRef50_C6I0L0 Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0L0_9BACT Length = 324 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 92/261 (35%), Gaps = 34/261 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 A + +V + + L P + LPK L EV L+ Sbjct: 73 RSRARFLSSVRAWTRFLELSGVRKDPR--ETPPAPRLPRSLPKILSQDEVERLIEAPDPH 130 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + +L+ + +G R++E +T LA V K+R Sbjct: 131 RPEGVRDRAILSFFYASGLRVSELATITADRVDLATGALRVMGKGAKER----------- 179 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + D L + ++ +T + + T I Sbjct: 180 ---------IAFLDERTRHLLSDYLTTVRP--AFAREHPELFLARDGAPLTRQALWTLIK 228 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + AA + P++PH RHS+A H+L G+ ++ +Q L+GH+ I +TE+YT V Sbjct: 229 KHGRAAG-----ITSPLSPHVLRHSFATHLLEKGLDIRSIQLLLGHEDIRTTEIYTHVSL 283 Query: 243 LDVAARHRVQFAMPESDAVAM 263 + ++ +S A + Sbjct: 284 AHLENTLKLHHPRGQSQASGL 304 >UniRef50_Q1LSD3 Tyrosine recombinase XerC subunit n=48 Tax=Proteobacteria RepID=Q1LSD3_RALME Length = 369 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 82/259 (31%), Gaps = 22/259 (8%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD- 66 A + A A+ + + LPK L AL+ + D Sbjct: 95 RTIARTLSAWRGFYLWAARHGHGVQSNPVDGVRAPKRGRPLPKALSVEHAVALVAHRQDD 154 Query: 67 ----LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + + +++G R++E + L + Sbjct: 155 TNESLRDQAVFELFYSSGLRLSELIQLDVR--------YTEDGDYRSSGWLDLDGAEVTV 206 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKI---PMERRNRRTGRTEKARIWEVTDRTVRT 179 R VP+ + L+ + ++ P R + TV+ Sbjct: 207 LGKGSRRRTVPVGSK-AIQALKAWIHVREMMLRPGALPEDAHALFLGTRGRRLPISTVQQ 265 Query: 180 WIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTK 239 I AA V PH RHS+A HML + L+ +Q ++GH SIS+T++YT Sbjct: 266 RIKRQALAAGV-----PSDVHPHMLRHSFATHMLQSSGDLRAVQEMLGHASISTTQIYTS 320 Query: 240 VFALDVAARHRVQFAMPES 258 + +A + Sbjct: 321 LDFQHLAKVYDQAHPRAGR 339 >UniRef50_C2D807 Possible integrase/recombinase XerD n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D807_9ACTN Length = 319 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 89/275 (32%), Gaps = 53/275 (19%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S V ++ + + + ++ LP L ++ LL Sbjct: 71 STVQRAVSSIKGFHKFMVVEQICEN-HPTTNLKLPKKSFHLPDVLTQDQIIHLLDDPFKP 129 Query: 68 -----------------------HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQ 104 K +L L+ G R++E L +GD Sbjct: 130 QLLPAPKLTARKALSLKPQACFYRDKAILEMLYGCGLRVSELCGLNQGDV---------- 179 Query: 105 LATLKQRTEKAARTAGRMPAGQQTHRLVP-LSDSWYVSQLQTMVAQLKIPMERRNRR-TG 162 + R+ RLVP L + Q + + + + Sbjct: 180 ---------LVSDELVRVFGKGSKERLVPCLG--TALESYQNYCTKWRALLACSPKTTDA 228 Query: 163 RTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVL 222 R ++ + V + + + + PHT RHSYA HML G+ L+++ Sbjct: 229 VFLSVRGTRISRQAVFSLVERYGSYVGI------KGLHPHTLRHSYATHMLEGGMNLRIV 282 Query: 223 QSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPE 257 Q L+GH SIS+T++YT + + + + + Sbjct: 283 QELLGHASISTTQLYTHIDLTHIRSEYMAAHPRAQ 317 >UniRef50_B0TP43 Integron integrase n=9 Tax=Bacteria RepID=B0TP43_SHEHH Length = 320 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 11/215 (5%) Query: 40 QMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPP 99 + + +LP L EVS +L + ++++ L+ +G R++E L L D LA Sbjct: 96 RYATKQRQLPIVLSTEEVSEVLCQLNG-RDQLIVQLLYGSGLRVSECLRLRIQDIDLARC 154 Query: 100 YPFVQ-LATLKQRTEKAA-RTAGRMPAGQQTHRLVPLSDSWYV-------SQLQTMVAQL 150 V+ K R + + A ++PA R + + D+ Y + + Sbjct: 155 SLTVRNGKGHKDRQTILSQKCAIKLPAYIDAARAIQIKDNTYCIGPSLPNALERKYPNAF 214 Query: 151 KIP-MERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYA 209 + T ++ + + AAA VT HTFRHS+A Sbjct: 215 RQAGWMFVFPSTTTSDNPYTKTHCRHHLHQSVIRKALAAAVRKTHIIKRVTCHTFRHSFA 274 Query: 210 MHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 H+L AG ++ +Q L+GH +++T++YT V Sbjct: 275 THLLQAGRDIRTIQELLGHNDVNTTQIYTHVLGQH 309 >UniRef50_A4ECJ8 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECJ8_9ACTN Length = 220 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 80/234 (34%), Gaps = 37/234 (15%) Query: 34 AALALRQMSMVHDELPKYLLAPEVSALLHYVP-----DLHRKMLLATLWNTGARINEALA 88 A++ + +LP L +V ALL L +L L+ +GARI+E A Sbjct: 10 DAVSAIASPKLPRDLPGVLTTQQVEALLKTPDTSTPAGLRDAAMLELLYASGARISELAA 69 Query: 89 LTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVA 148 L + + R+VPL + + + Sbjct: 70 LNVESIGWSERTLRLWGKGS-------------------KERIVPLYR-RALEATRLYIE 109 Query: 149 QLKIPMERRNRRT-------GRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 + + + + +R AR ++ +R A + P Sbjct: 110 EGRPELLAQAKRRDPATGPHPLLISARGNRMSAAMLRRRFHTLATLAG-----IPADIAP 164 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAM 255 H RH++A +L G L+ +Q L+GH S+S+T++YT + + Sbjct: 165 HAMRHTFATDLLEGGADLRSVQELLGHASLSTTQIYTHLTPDRLKRAVAQAHPR 218 >UniRef50_A6TQC7 Phage integrase family protein n=3 Tax=Clostridia RepID=A6TQC7_ALKMQ Length = 354 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 85/242 (35%), Gaps = 35/242 (14%) Query: 7 HSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD 66 H+ + + A+ Q + + L LP L EV ++L V + Sbjct: 139 HAFANQALSAIKFYYQHS-----LKKDKVLYDLPRPKKEKTLPNILSQREVLSILDSVNN 193 Query: 67 LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQ 126 + K +L ++ G R+ E + L GD V+ Sbjct: 194 IKHKSILLLTYSAGLRVGEVVRLKVGDIDSDRMLIHVR------------------QGKG 235 Query: 127 QTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVA 186 + R LS+ + + + + + +T+R+V+ A Sbjct: 236 RKDRYTILSEVALSTLRKYAMIEKPKDWLFPGGKENCF-------LTERSVQKTFSVACK 288 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 A + H+ RHS+A H+L G L+ +Q L+GH S +TE+YT V + + Sbjct: 289 RA-----KVKKHASVHSLRHSFATHLLEGGTDLRYIQELLGHSSSKTTEIYTHVSVANFS 343 Query: 247 AR 248 Sbjct: 344 KI 345 >UniRef50_A3EW74 Putative phage integrase family protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW74_9BACT Length = 314 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 97/268 (36%), Gaps = 37/268 (13%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + ++ A+ S + + + LP L E+ LL Sbjct: 69 RSRSRVLSAIRSWSRFLKRRGLPAIDP--DTLPVPRLPRNLPGVLDEEEILRLLEAPDPK 126 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 + + +LAT + +G R++E LT +L V K+R Sbjct: 127 TDEGIRDRAILATFYASGLRVSELAELTLDRLNLNEEQIRVTGKGQKER----------- 175 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 V D ++L+ + +++ + T + + T + + I Sbjct: 176 ---------VAFLDGLSCARLKLYLERVRPSTNTAEKTLFLTRRQTGF--TRQGLWLLIK 224 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 D V+PHT RHS+A H+L G+ ++ +Q L+GH I +TE+YT V Sbjct: 225 GYARQCGID-----RSVSPHTLRHSFATHLLSHGMDIRSIQILLGHSDIQTTEIYTHVDI 279 Query: 243 LDVAA---RHRVQFAMPESDAVAMLKQL 267 +A ++ + PE D A L Sbjct: 280 RMLAEDLAKYHPRGKRPEKDGQAPSPSL 307 >UniRef50_Q253S9 Tyrosine recombinase xerC n=7 Tax=Chlamydiales RepID=XERC_CHLFF Length = 312 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 32/253 (12%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 + A+ S L I + ELP + +V L+ Sbjct: 86 RTIKRRLSAIKSFSHYC-LKHRILLEDPTETIHGPRLPKELPSPITYEQVEILMATPDLS 144 Query: 66 ---DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 L + LL +++G RI+E ++L D ++ Sbjct: 145 KYTGLRDRCLLELFYSSGLRISEIVSLNHWDIDFNSNLIRIRGKG--------------- 189 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIG 182 + R++P++ + L+ + + ++ + +T R++ Sbjct: 190 ----KKERIIPIT-TLAAQWLKQYLNHPERAGVAKDSQ-AIFLNCFGTRLTTRSIDRKFQ 243 Query: 183 EAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 + + + G +TPHT RH+ A H L G+ LK +Q+L+GH S+ +T +YT V Sbjct: 244 KYLRLSGLSG-----NITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSM 298 Query: 243 LDVAARHRVQFAM 255 H Sbjct: 299 KLKKQTHNESHPH 311 >UniRef50_C9M7U3 Integrase/recombinase XerD n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7U3_9BACT Length = 319 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 91/258 (35%), Gaps = 37/258 (14%) Query: 9 QSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV---- 64 + + A+ + AI L + D LP+ L V+ L+ Sbjct: 94 SVSRKLSALRGFCGYLTDQSAIPSDPTLP-IRGPKWPDHLPQALTQDAVNRLISAAGTIE 152 Query: 65 PDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPA 124 P + LL ++ G R+ E ++L D + V Sbjct: 153 PAARNRCLLELAYSAGLRVAELVSLKWSDLDETERWITVMGKGS---------------- 196 Query: 125 GQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEA 184 R+VP W S L AQ + + +T+RTV + A Sbjct: 197 ---KERMVPYG-QWAASALAEWKAQCPP-----SEKGWVFPGKGGKSLTERTVHRLVEAA 247 Query: 185 VAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALD 244 A G +PHT RH +A HML G +K +Q L+GH+S+ +T+ Y ++ Sbjct: 248 SQLAGTPGA------SPHTLRHCFATHMLEGGASVKAVQELLGHESLLTTQRYLRISPER 301 Query: 245 VAARH-RVQFAMPESDAV 261 + + V + E D + Sbjct: 302 LRRSYDDVNDDLSERDGL 319 >UniRef50_D0W8E1 Tyrosine recombinase XerC n=2 Tax=Neisseria RepID=D0W8E1_NEILA Length = 334 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 86/263 (32%), Gaps = 36/263 (13%) Query: 5 VIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV 64 + A + + + + A +PK L ++ +L Sbjct: 102 LNARTLARKLSSWRQYCAWL-VKRGLMCADPTAGISPPKQPQRIPKALPQEWLNRMLDLP 160 Query: 65 PD------LHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAART 118 D + L ++ +G R++E L D L + V Sbjct: 161 VDGGDPLAVRDHALFELMYGSGLRVSEIHGLNADDVYLDEAWVHVTGKG----------- 209 Query: 119 AGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVR 178 + R VPL+ L+ + + + ++ R ++ Sbjct: 210 --------RKQRQVPLTGKSA-EALKNYL----PLRQTASDGKALFTGRNGTRLSQRQIQ 256 Query: 179 TWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYT 238 + + A V+PH RHSYA H+L A ++ +Q L+GH S+S+T++YT Sbjct: 257 KRLAQWAAING-----DGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLSTTQIYT 311 Query: 239 KVFALDVAARHRVQFAMPESDAV 261 K+ +A + + Sbjct: 312 KLDFDHIARLYDEAHPRAKRQEK 334 >UniRef50_C8PTU7 Integron integrase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTU7_9SPIO Length = 426 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 23/221 (10%) Query: 39 RQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAP 98 + +LP L E + + +P+ + + L+ TG R+ E+L L D Sbjct: 199 IIRAKKSKKLPAVLSREETAKIFSLLPENDYGLFIRLLYGTGMRLMESLRLRVQDIDFDK 258 Query: 99 PYPFVQ-LATLKQRTEKAARTAGRMPAG--QQTHRL-----------VPLSDSWYVS--- 141 V K R + + R+ VPL + Sbjct: 259 NEITVHCGKGAKDRKTMLPVSLKFPLQKHLENVRRIHEADCKDGFGLVPLPSALAKKYPN 318 Query: 142 QLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTP 201 +T Q P RR + E+ R + ++ + EAV + P+ Sbjct: 319 AGKTWAWQWVFPQARRWQNKETGEQGR-HHIDPSVIQRTLHEAVLRSG-----IPKPIGC 372 Query: 202 HTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFA 242 HTFRHS+A H+L +G ++ +Q L+GH +S+T VYT V Sbjct: 373 HTFRHSFATHLLESGYDIRTIQELLGHSDVSTTMVYTHVLN 413 >UniRef50_A6H1H3 Integrase/recombinase n=2 Tax=Bacteria RepID=A6H1H3_FLAPJ Length = 347 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 30/213 (14%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 + LP L E+ +L ++ K +L+ +++ G R +E L L D Sbjct: 158 VDKIHRPKRSKLLPNVLSKEEIKLILEAHSNIKHKTMLSLIYSCGLRRSELLHLKPTDID 217 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 ++ + + R+ PLS V + Sbjct: 218 SKRGIVIIR------------------QSKGKKDRIAPLSPKILVMLREYYSNYKPKSWL 259 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + ++++++ + +A+ A + PV+ H RHSYA H+L + Sbjct: 260 FEGQIP-------GETYSEKSLQNVLKQALEKA-----KIAKPVSLHWLRHSYATHLLES 307 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAAR 248 G L+ +Q L+GH S +TE+YT V ++ Sbjct: 308 GTDLRYIQELLGHSSTKTTEIYTHVSTKNLQQI 340 >UniRef50_Q0A7P4 Integron integrase n=318 Tax=root RepID=Q0A7P4_ALHEH Length = 462 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 16/221 (7%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 L + S LP L EV ALL + + +L + L+ +G R+ EAL L D Sbjct: 233 LQAIERSKRPRRLPVVLSRNEVKALLSEMHGV-HHLLASLLYGSGMRVMEALRLRVKDID 291 Query: 96 LAPPYPFVQ-LATLKQRTEKAARTAGRMPAGQQTHRLV------PLSDSWYVSQLQTMVA 148 V+ K R + Q R V L+D + + L +A Sbjct: 292 FERRAITVRSGKGDKDRVVPLPESTIAPL--QNHLRQVKAIHEGDLADGYGEASLPHALA 349 Query: 149 QLKIPMERRNRRTGRTEKARI------WEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 + + AR+ + + + A + H Sbjct: 350 RKYRNAGKEWHWQYVFPSARVAVDPRSGAIRRHHLHETAVQRAVKRAVRASRIPKQASCH 409 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 T RHS+A H+L G ++ +Q L+GH +S+T +YT V + Sbjct: 410 TLRHSFATHLLERGQDIRTVQELLGHADVSTTMIYTHVMSK 450 >UniRef50_D1B6D4 Integrase family protein n=3 Tax=Synergistaceae RepID=D1B6D4_THEAS Length = 292 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 88/253 (34%), Gaps = 39/253 (15%) Query: 12 VMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPD----L 67 + ++ I+ + LP+ + P+V LL P Sbjct: 68 RKMSSIRGFMGYLRDIGVIERD-PSEGVKGPRSSPGLPRAISYPDVCRLLEEGPSGREAF 126 Query: 68 HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQ 127 ++++ L+ +G R++E L D + + V K Sbjct: 127 RDRLVMELLYGSGLRVSELCDLDWDDVDVEERWIRVMGKGSKG----------------- 169 Query: 128 THRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARI-WEVTDRTVRTWIGEAVA 186 R+VP S L+ E R R +T RTV + Sbjct: 170 --RMVPFG-SIVQDMLRRW-------GEMVGRAGPLFPGKRGAERLTQRTVHRIVSGCAR 219 Query: 187 AAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVA 246 G V+PHT RHS+A H+L G L+V+Q LMGH+S+ +T+ Y V A + Sbjct: 220 RVGLFG------VSPHTLRHSFATHLLEGGASLRVVQELMGHESLVTTQRYLDVTAERMR 273 Query: 247 ARHRVQFAMPESD 259 ++V D Sbjct: 274 FSYQVHHPRAGGD 286 >UniRef50_UPI0000510416 phage integrase family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510416 Length = 319 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 82/265 (30%), Gaps = 43/265 (16%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL------- 60 S A + AV S + A + LP L + + L Sbjct: 82 STVARKIAAVKSFFAYCVNQHGLSN-NPAARLRTPKKDSRLPTVLKPQQAADLVSRQRTV 140 Query: 61 ---------LHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQR 111 + + +L L+ T R++E L RGD V Sbjct: 141 HTEADNSDPIEATKWVRDAAILEMLYATAVRVSELTGLNRGDVDHQRSMITV-------- 192 Query: 112 TEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWE 171 R VP + LQ ++ L+ + R Sbjct: 193 -----------LGKGNKERRVPYGKP-AQTALQKWLS-LRDTFASESSGDALFLGVRGGR 239 Query: 172 VTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSI 231 + R VR + A + + PH RHS A HML G L+ +Q L+GH ++ Sbjct: 240 IGARQVRELVHRY----GAADPSAP-DIGPHGLRHSAATHMLDGGADLRQIQELLGHSTM 294 Query: 232 SSTEVYTKVFALDVAARHRVQFAMP 256 SST++YT V + +R Sbjct: 295 SSTQIYTHVSMQRLQETYRQAHPRA 319 >UniRef50_Q6A7J6 Integrase/recombinase n=4 Tax=Propionibacterium RepID=Q6A7J6_PROAC Length = 315 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 78/259 (30%), Gaps = 37/259 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLH----- 62 + A + A+ + + V LP L + +L Sbjct: 84 ATMQRRWSAARVFFRWAA-NEGLISADPTTALNSAKVPKRLPATLGVDQARHILDEAVAQ 142 Query: 63 -----YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAAR 117 +L L+ G R+ E L GD + V Sbjct: 143 ARHDESPHGARDAAILEVLYGGGLRVGELCGLDLGDVDRSRRTVKVTGKGD--------- 193 Query: 118 TAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTV 177 R VP+ + + T + + + + AR + R V Sbjct: 194 ----------KERTVPMGAP-ALRAIDTWLPR-REEWVGPHSGQALFLGARGRRIDQRVV 241 Query: 178 RTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVY 237 R + S + PH RH+ A H+L G L+ +Q ++GH+S+++T++Y Sbjct: 242 RRVVH-----TDLRAEPDSPDLGPHGLRHAMATHLLEGGADLRTVQDILGHESLATTQIY 296 Query: 238 TKVFALDVAARHRVQFAMP 256 T V + R Sbjct: 297 THVSTERLRTAFRQAHPRA 315 >UniRef50_C5CH36 Integrase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CH36_KOSOT Length = 305 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 92/245 (37%), Gaps = 29/245 (11%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVP-- 65 S A + + + + ++ L + +P+Y+ EV +L P Sbjct: 74 SSVARHLSTLKTFYMFLYVSGTVNK-IPTDLVKAPKTRRRIPEYISYEEVQKILEAFPET 132 Query: 66 --DLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMP 123 + ++A ++ G R++E +LT D SL P V++ Sbjct: 133 HLGKRNRAIVALMYYCGLRVSEVCSLTLRDISLESD-PLVRVK----------------S 175 Query: 124 AGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGE 183 R+VPL+ V + + + NR R +T ++V + Sbjct: 176 GKGDKDRIVPLT-PDAVRIISDYLKH-RDRFPDANRHIKLFVGIRGEPITRKSVNKMLQN 233 Query: 184 AVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFAL 243 V + + PH FRHS A H+L G +K++Q ++GH +IS+T +Y + Sbjct: 234 HVKK-----IFPDKHLHPHIFRHSCATHLLQRGASIKIVQEILGHANISTTSIYLHITDR 288 Query: 244 DVAAR 248 + Sbjct: 289 EKREA 293 >UniRef50_B7GQE1 Tyrosine recombinase xerC n=6 Tax=Bifidobacteriaceae RepID=XERC_BIFLI Length = 355 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 67/201 (33%), Gaps = 33/201 (16%) Query: 63 YVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRM 122 +L L+ TG R+ E +++ D + V Sbjct: 181 TAESQRNAAILELLYATGIRVAELVSMDIADIDFSNRTIKVTGKG--------------- 225 Query: 123 PAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMER-------RNRRTGRTEKARIWEVTDR 175 R+VP L+T + Q + + R AR + R Sbjct: 226 ----NKQRVVPFGLP-AQRALETWLEQGRPVLARTATDAVKSRAANALFLGARGGRIDQR 280 Query: 176 TVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTE 235 R + A A ++PH RHS A H+L G L+ +Q ++GH S+ +T+ Sbjct: 281 IARDIVHRAAREAGVP------DISPHALRHSAATHILDGGADLREVQEMLGHSSLKTTQ 334 Query: 236 VYTKVFALDVAARHRVQFAMP 256 YT V + R+ F Sbjct: 335 RYTHVSIEQLKNRYGQAFPRA 355 >UniRef50_A8UM85 Tyrosine type site-specific recombinase n=2 Tax=unclassified Flavobacteriales (miscellaneous) RepID=A8UM85_9FLAO Length = 376 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 36/241 (14%) Query: 8 SQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDL 67 S + + ++ + P + +LPK L +V ++ +L Sbjct: 166 SYINIAINSIKFYYESVLGM-----PNRFYQIERPRKAKKLPKVLSKEDVLKVITNTNNL 220 Query: 68 HRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQ 127 K +++ L+++G R NE + L D + A + Sbjct: 221 KHKCIVSLLYSSGIRRNELIHLKISDIDSKRMLIRI------------------DAAKGK 262 Query: 128 THRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAA 187 R L + L+ Q K E + + ++V + A Sbjct: 263 KDRYT-LLSHALLKDLRDYYKQWKP-------EKYIFEGLYGKQYSAQSVGQIVKNAAIK 314 Query: 188 AAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAA 247 A + VTPH RHS+A H+L G+ ++ +Q L+GH S +TE+YT V Sbjct: 315 A-----RIQITVTPHMLRHSFATHLLEDGVDIRQIQVLLGHSSTKTTEIYTHVATTTFKK 369 Query: 248 R 248 Sbjct: 370 I 370 >UniRef50_A1RWD6 Phage integrase family protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWD6_THEPD Length = 295 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 33/214 (15%) Query: 36 LALRQMSMVHDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFS 95 +A ++ LP+YL A EV +++ +L K+++ L+ TG R++E ++L D Sbjct: 98 IAGFELPKREKRLPRYLEAEEVFRMVNAAENLRDKLIVLLLFTTGLRVSELVSLRVSDVD 157 Query: 96 LAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPME 155 L V+ RLV D L++ + L Sbjct: 158 LEKRTLRVRGKGS-------------------KERLVYFPDYVA-DLLRSYMKGLNSEW- 196 Query: 156 RRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYA 215 + TV + A VTPHT RHS+A L A Sbjct: 197 -------LFPSETAEHIHYTTVERVLKRLKEKAG-----IEKKVTPHTLRHSFATLSLAA 244 Query: 216 GIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH 249 G+ ++ +Q L+GH ++++T+VY V + + Sbjct: 245 GLDIREIQELLGHSNLNTTQVYAHVSRERLKRDY 278 >UniRef50_A0QJ30 Tyrosine recombinase XerC n=4 Tax=Actinobacteria (class) RepID=A0QJ30_MYCA1 Length = 301 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 90/264 (34%), Gaps = 35/264 (13%) Query: 2 SGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEV---- 57 +G V + A AV + A + A Q+ H LP L + Sbjct: 64 AGGVARTTLARRTSAVKAFTAWAVRRGLLT-ADPAARLQVPKTHRTLPAVLRQDQALGAM 122 Query: 58 -----SALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRT 112 A L ++++ L+ TG R++E L D V Sbjct: 123 AAAKNGAAQGDPIALRDRLIVEMLYATGIRVSELCGLDIDDVDTGRRLVRV--------- 173 Query: 113 EKAARTAGRMPAGQQTHRLVPLSDSWYVSQLQTMVAQLKIPMERRNRRTGRTEKARIWEV 172 R VP L +A + + AR + Sbjct: 174 ----------LGKGNKQRSVPFGAP-AGEALHAWLADGRPALANAESGPALLLGARGRRL 222 Query: 173 TDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSIS 232 R RT + + +AA V+ + + PH RHS A H+L G L+V+Q L+GH S++ Sbjct: 223 DVRQARTVVHQTIAA-----VSGAPDMGPHGLRHSAATHLLEGGADLRVVQELLGHSSLA 277 Query: 233 STEVYTKVFALDVAARHRVQFAMP 256 +T++YT V + A H Sbjct: 278 TTQLYTHVAVSRLRAVHDQAHPRA 301 >UniRef50_D0L0D4 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0D4_HALNC Length = 329 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 91/244 (37%), Gaps = 33/244 (13%) Query: 28 VAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYV--PD---LHRKMLLATLWNTGAR 82 + I PA+ + +LP ++ LL D + + + ++++G R Sbjct: 99 IHIACPASPDALKSPKAAKKLPDAPAIETMNQLLDQPMVEDELLIRDRCMFELIYSSGLR 158 Query: 83 INEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTHRLVPLSDSWYVSQ 142 + E + L D + V ++ RLVP+ + + Sbjct: 159 VAELVRLDVHDIDRSEGIARVTGK-------------------REKTRLVPVGGK-ALDR 198 Query: 143 LQTMVAQLKIPMERRNRRTGRTEKARIWEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPH 202 + + ++ + + R +T R+V+ + + PH Sbjct: 199 VALWLP-IRKTLLKDTTEPALFLNRRGQRLTIRSVQMRLNRLAQQ-----THLGQTLHPH 252 Query: 203 TFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFAMPESDAVA 262 RH++A H+L + L+ +Q ++GH+S+S+T++YT + +A + P + Sbjct: 253 QLRHAFATHVLESSGDLRAVQEMLGHESLSTTQIYTHLDFQRLAQVYESA--HPRAHIKK 310 Query: 263 MLKQ 266 +K Sbjct: 311 QVKS 314 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.167 0.573 Lambda K H 0.267 0.0510 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,624,320,260 Number of Sequences: 3077464 Number of extensions: 78236714 Number of successful extensions: 244108 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 6362 Number of HSP's successfully gapped in prelim test: 3338 Number of HSP's that attempted gapping in prelim test: 224500 Number of HSP's gapped (non-prelim): 10664 length of query: 268 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 142 effective length of database: 652,635,892 effective search space: 92674296664 effective search space used: 92674296664 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 93 (40.1 bits)