11 c1ynpA_ Probab=100.00  E-value=0  Score=398.96  Aligned_columns=273  Identities=36%

Q ss_pred             CCEEECCCCCCEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCE
Q ss_conf             95615769996644011522424887777778998999999999998699889974502887008999999831684518
Q batch____         1 MKKIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQV   80 (326)
Q Consensus         1 M~~r~lG~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~l~~A~~~Gin~fDTA~~Yg~g~sE~~lG~al~~~~R~~~   80 (326)
                      |+||+||+||++||+||||||++|        .+++++.++|++|+++|||+||||+.||+|.||..+|+||++. |..+
T Consensus         2 M~~r~lG~tg~~vs~lglGt~~~g--------~~~~~~~~~l~~A~~~Gin~fDTA~~Yg~g~sE~~lG~~l~~~-~~~~   72 (283)
T c1ynpA_           2 MKKRQLGTSDLHVSELGFGCMSLG--------TDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGR-RQDI   72 (283)
T ss_dssp             CCEEECTTSSCEEESBCBCSCCCC--------SCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTTC-GGGC
T ss_pred             CCCCCCCCCCCEECCEEEEECCCC--------CCHHHHHHHHHHHHHCCCCEEECCCHHCCCHHHHHHHHHHHHC-CCEE
T ss_conf             753347699865340207208898--------7889999999999986998899710318984489999998404-8769


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             99611135667776655566665665799989999999999987599818477763688873114689999999999975
Q batch____        81 VVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSE  160 (326)
Q Consensus        81 ~i~TK~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~~~~SL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~L~~~  160 (326)
                      ++.+|.                       +++.++++++.||++|++||+|++++|+|+..   .+.++.+++|++|+++
T Consensus        73 ~~~~~~-----------------------~~~~i~~~~e~sl~~L~~d~iDl~~lh~~~~~---~~~~~~~~~l~~l~~~  126 (283)
T c1ynpA_          73 ILATKV-----------------------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTID---DPIDETIEAFEELKQE  126 (283)
T ss_dssp             EEEEEC-----------------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTT---SCHHHHHHHHHHHHHH
T ss_pred             EECCCC-----------------------CHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCC---CCHHHHHHHHHHHHHH
T ss_conf             972675-----------------------37999999999999708984320210068878---8968899999999984


Q ss_pred             CCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78749850388999999975327974342202222323238899999983982530110257501244567768666434
Q batch____       161 GKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARA  240 (326)
Q Consensus       161 G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~G~L~~~~~~~~~~~~~~~  240 (326)
                      |+|++||+|+|+++.+.+....+.++++|++||++++..+ +.+++|+++|+++++|+++++|.|++.......+..   
T Consensus       127 g~i~~iG~s~~~~~~~~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~g~~~~~~~~l~~g~l~~~~~~~~~~~~---  202 (283)
T c1ynpA_         127 GVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRRPE-EWFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYL---  202 (283)
T ss_dssp             TSEEEEEEECCCHHHHHHHHHHSCCCEEEEECBTTBCGGG-GGHHHHHHTTCEEEEECTTGGGTTSSSCCCTTCCBT---
T ss_pred             HHCCEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCH-HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC---
T ss_conf             3047131477888999983133571288871036756747-889999984982798000235312478676754432---


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCC-CCCHHHHHHHHH
Q ss_conf             6532243354568999999999998838998999999999589942997279899999998986199-898899999999
Q batch____       241 NKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNI-NLSDADATLMRE  319 (326)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~ia~~~~~t~aq~al~~~l~~~~v~~vi~G~~~~~~l~enl~a~~~-~L~~~~~~~l~~  319 (326)
                                 ........+..+|.++++|++|+|++|+|++|.|++||+|+++++||+||++++++ +||++++++|++
T Consensus       203 -----------~~~~~~~~~~~~a~~~~~s~~q~al~~~l~~~~v~~vi~G~~~~~~l~enl~a~~~~~Lt~ee~~~i~~  271 (283)
T c1ynpA_         203 -----------NYRYDELKLLRESLPTDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQK  271 (283)
T ss_dssp             -----------TBCHHHHHHHHHHSCSSSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHH
T ss_pred             -----------CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf             -----------101013899999987099989999999984899409961799999999989861988889899999996


Q ss_pred             HHHH
Q ss_conf             9987
Q batch____       320 MAEA  323 (326)
Q Consensus       320 i~~~  323 (326)
                      +.+.
T Consensus       272 ~~~~  275 (283)
T c1ynpA_         272 LAKA  275 (283)
T ss_dssp             HSCC
T ss_pred             HCCC
T ss_conf             4110