253 c3snhA_ Probab=86.09   E-value=1.9  Score=22.78  Aligned_columns=121  Identities=26%

Q ss_pred             CHHHHHHHHHHH----HHHCCCEE---EEEEEECCCCCHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCHHHEEECCCC
Q ss_conf             946889999999----86528704---89987116776868889999999-60467677752000232000111221355
Q batch____         1 MKRLKNELNALV----NRGVDRHL---RLAVTGLSRSGKTAFITAMVNQL-LNIHAGARLPLLSAVREERLLGVKRIPQR   72 (465)
Q Consensus         1 ~~~l~~~~~~~~----~r~~d~~~---RlgVTGLSrSGKTaFITSLi~~L-l~~~~~~~lP~f~~~~~~Rl~~vk~~~q~   72 (465)
                      |++|-.-.+.+-    .-|.+.++   .|.|.|==-||||-++-|++..= +-++.+.|.|.-=.++..---.+...-.+
T Consensus         1 m~~Li~~in~LqD~l~~lG~~~~i~LPqiVVvG~QSsGKSSvlEai~g~~flprg~~TR~p~~i~l~~~~~~~~~~~~~~   80 (652)
T c3snhA_           1 MEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGTRRPLVLQLVNATTEYAEFLHCK   80 (652)
T ss_dssp             CTTHHHHHHHHHHHHHTTTCCSSSCCCEEEEEECTTCCHHHHHHHHHTSCCSCSSCCCCSCEEEEEEECSSCEEECTTTC
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECC
T ss_conf             90179899999999987299987889818998889887999988761874277999712648999985798607898638


Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCHHHHCCCCCCEEEEEEEECCC
Q ss_conf             5789877868999986327888883102601589999984351144205887469999871883
Q batch____        73 DFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPG  136 (465)
Q Consensus        73 d~~vPrF~Ye~~~~~L~~~~p~WP~sT~~iSe~rl~ir~~~~~~~~~~~~~~~tl~LdivDYPG  136 (465)
                      +....-|+--...-.-..+.-     ..++|.--+.++....+-.-          |-|||-||
T Consensus        81 ~~~~~d~~~i~~~i~~~~~~~-----~~~~s~~~i~l~i~~p~~~~----------LtlvDLPG  129 (652)
T c3snhA_          81 GKKFTDFEEVRLEIEAETDRV-----TKGISPVPINLRVYSPHVLN----------LTLVDLPG  129 (652)
T ss_dssp             SCCBCCHHHHHHHHHHHHHHT-----CCCCCSCCCCCEEEESSSCS----------EEEEECCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHH-----HCCCCCCCEEEEEEECCCCC----------EEEEECCC
T ss_conf             754289899999999998764-----14778672799995089764----------17876789