BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (230 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q8X8F2 Porin ompL n=44 Tax=Enterobacteriaceae RepID=OMP... 446 e-124 UniRef50_Q9L7R3 Porin ompL n=35 Tax=Enterobacteriaceae RepID=OMP... 427 e-118 UniRef50_A8AGB9 Putative uncharacterized protein n=1 Tax=Citroba... 74 4e-12 UniRef50_UPI0001C33DB2 oligogalacturonate-specific porin protein... 73 6e-12 UniRef50_A8AJA0 Putative uncharacterized protein n=3 Tax=Enterob... 72 1e-11 UniRef50_B5Y2Y8 Oligogalacturonate-specific porin protein (KdgM)... 70 8e-11 UniRef50_P69857 Probable N-acetylneuraminic acid outer membrane ... 65 2e-09 UniRef50_Q7MCI9 Putative outer membrane protein n=4 Tax=Gammapro... 47 5e-04 UniRef50_A4WE32 Oligogalacturonate-specific porin n=9 Tax=Entero... 46 0.001 UniRef50_UPI00018269B6 hypothetical protein EcanA3_20802 n=1 Tax... 45 0.001 UniRef50_A5KUM1 Putative outer membrane protein n=1 Tax=Vibriona... 45 0.002 UniRef50_A7MI99 Putative uncharacterized protein n=1 Tax=Cronoba... 44 0.006 >UniRef50_Q8X8F2 Porin ompL n=44 Tax=Enterobacteriaceae RepID=OMPL_ECO57 Length = 230 Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust. Identities = 214/230 (93%), Positives = 219/230 (95%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK INAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTY Sbjct: 1 MKNINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF PWFNL Sbjct: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNL 120 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 TVRNR+NHNNYSSTDL+G+LDNND+YEIG YWNF ITDKFSYTFEPHYF +NDFNS NG Sbjct: 121 TVRNRFNHNNYSSTDLNGDLDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNINDFNSGNG 180 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 HHWEITNTFRYRINEHWLPY ELRWLDRNVEPYHREQNQIRIGTKYFF Sbjct: 181 TKHHWEITNTFRYRINEHWLPYIELRWLDRNVEPYHREQNQIRIGTKYFF 230 >UniRef50_Q9L7R3 Porin ompL n=35 Tax=Enterobacteriaceae RepID=OMPL_SALTY Length = 230 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 203/230 (88%), Positives = 212/230 (92%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK +N +++L+S+ S SVFAGAYVENREAYNLASDQ E MLRVGYN DMGAGIMLTNTY Sbjct: 1 MKSLNTLVILTSVISTSVFAGAYVENREAYNLASDQMEFMLRVGYNSDMGAGIMLTNTYT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 QR+DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF PWFNL Sbjct: 61 LQRDDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNL 120 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 TVRNRYNHNNYSSTDL+GELDNND+YEIG YWNF ITDKFSYTFEPHYF VNDFNSSNG Sbjct: 121 TVRNRYNHNNYSSTDLNGELDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNVNDFNSSNG 180 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 HHWEITNTFRYRINEHWLPYFELRWLDRNV PYHREQNQIRIG KYFF Sbjct: 181 TKHHWEITNTFRYRINEHWLPYFELRWLDRNVGPYHREQNQIRIGAKYFF 230 >UniRef50_A8AGB9 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AGB9_CITK8 Length = 265 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 20/245 (8%) Query: 3 KINAIILLSSLTSASVFAGAYV-------------ENREAYNLASDQGEVMLRVGYNFDM 49 ++ A +L S++ +F GA + + R YN+ + E +V ++ Sbjct: 20 RLLAGVLFMSMSKKCLFTGAVIFFSFTPFVHAVQFDVRGGYNIENHSYESRFKVSNSWSS 79 Query: 50 GA-GIMLTNTYNFQRE-DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVY 107 G M T++ N D++ YNE+E Y + D+ + PGG+I+ + G+ Y Sbjct: 80 GWWASMETDSNNGSPSLDDMTSSYNEMETNYT-WHINDRFALVPGGVIHWSNSGTQLRPY 138 Query: 108 LDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPH 167 + +NYK F+ +R R +H+NY D +G+ +++ + I + +KI +++ ++ Sbjct: 139 IRLNYKISERFSSGIRYRLDHHNYDVVDNTGDTIHDNEHRIDLFLGYKINQDWNFMWQGT 198 Query: 168 YFMRVN-DFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVE---PYHREQNQIR 223 +M + D +NGK E T +YR NE++ PYFE +LD + ++IR Sbjct: 199 AYMHQDPDLEYNNGKRWATENAFTIKYRWNEYFSPYFEYDYLDEQSNYKGEKGKPDSRIR 258 Query: 224 IGTKY 228 +G + Sbjct: 259 VGVTF 263 >UniRef50_UPI0001C33DB2 oligogalacturonate-specific porin protein (KdgM) n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33DB2 Length = 232 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 10/229 (4%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT--NTYN 60 K A++L T + A + + R Y AS E ++ +F G + + N Sbjct: 2 KRTALVLAVCCTPLASHAMTF-DMRGGYKEASHTYESRFKMSQSFQSGYWLSMETDNKQG 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 D+ YNEIEG Y +K L IQPG + + S G+ Y+ + Sbjct: 61 NDNYDQSTTDYNEIEGNYK-YKLNPALAIQPGMVYHWSSAGTQIRPYVKFIWNMTDSVYS 119 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 +R RY+ N Y S DLSG +D + Y+ ++ +K++ P ++ VNDF+ +NG Sbjct: 120 GIRFRYDWNQYDSVDLSGNMDKGSVERVDLYFGWQ-NEKWNIQDNPVFYRYVNDFHYNNG 178 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE----QNQIRIG 225 K +E +Y++N+ W PY E ++++ + Y E +N+ R+G Sbjct: 179 KKSSYENDLVIKYKLNKTWQPYVEWDYMEQQGK-YDGESGLTENRFRVG 226 >UniRef50_A8AJA0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AJA0_CITK8 Length = 263 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 30/257 (11%) Query: 2 KKINAIILLSSLT--SASVFAG------------------AYVENREAYNLASDQGEVML 41 K +N +L ++L SASVFA Y R Y AS++ L Sbjct: 4 KNMNTALLAAALVMPSASVFADNNSHSTTAPQAKEKPFTTVYFAPRTQYRTASERFLQRL 63 Query: 42 RVGYNFDMGAGIMLTNTYNFQREDEL-------KHGYNEIEGWYPLFKPTDKLTIQPGGL 94 + I ++F+ + +L K Y E E P ++PG + Sbjct: 64 MLTGVVQDPNSIFARMYWSFETDSDLGKNMEQWKSSYEEAEFNKPFPLGESDFWLEPGVV 123 Query: 95 INDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNF 154 + +S GS YL + Y F P +R RYNH N+ S L G+ D++ + + Y Sbjct: 124 FHWESAGSRIDPYLGIGYHFDPTLGAVLRYRYNHQNHDSQTLQGDWDDSSEHRVDIYLTK 183 Query: 155 KITDKFSYTFEPHYFMRV--NDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNV 212 T F + P Y+ + + F +NGK+H + F + + P+FEL +LD Sbjct: 184 YFTPDFWVQYNPTYYSKTHGDKFEYANGKNHTLQHNFVFNFHATPRFYPFFELGYLDEYK 243 Query: 213 E-PYHREQNQIRIGTKY 228 + + + QIR+G KY Sbjct: 244 DGDDTKNEYQIRVGFKY 260 >UniRef50_B5Y2Y8 Oligogalacturonate-specific porin protein (KdgM) n=2 Tax=Klebsiella RepID=B5Y2Y8_KLEP3 Length = 250 Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 9/164 (5%) Query: 71 YNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNN 130 YNEIE Y + DK +QPGG+ + S G+ YL VNYK P +R RY++N Sbjct: 88 YNEIEANYS-WPFADKWALQPGGIYHWSSKGTQLRPYLRVNYKATPDLTFGLRYRYDYNT 146 Query: 131 YSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVN-DFNSSNGKDHHWEITN 189 Y + + +GE + + Y +K ++S ++ + VN D+ N K E Sbjct: 147 YETVNSAGESHRDSVNRLDLYVAYKFNAQWSALYQGTVYRHVNDDYKYKNDKSSATENAL 206 Query: 190 TFRYRINEHWLPYFELRWLDRNVEPYHREQNQI-----RIGTKY 228 T RY+ N+ + PY E +L + + YH QN+I RIG + Sbjct: 207 TLRYKWNDWFSPYIEYDYLGK--QGYHDGQNKISESRYRIGMTF 248 >UniRef50_P69857 Probable N-acetylneuraminic acid outer membrane channel protein nanC n=57 Tax=Bacteria RepID=NANC_ECO57 Length = 238 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 12/235 (5%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGA-GIMLTNTYNF 61 KI + +LL +S + A ++ R Y S E L+V + G M +NT+N Sbjct: 5 KILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNT 64 Query: 62 QREDELKHGY---NEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWF 118 +++ ++ ++E Y + K D+ T++PG L + S G+ Y+ +++ Sbjct: 65 IHDNKKENAALNDVQVEVNYAI-KLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDL 123 Query: 119 NLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSS 178 N +R RY+ Y DLSG++ ++ + Y + I F++ ++ + + ND+ + Sbjct: 124 NFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYA 183 Query: 179 NGKDHHWEITNTF--RYRINEHWLPYFELRWLDRNVEPYHRE---QNQIRIGTKY 228 N K W N F +Y + PY E +LDR R+ +N RIG + Sbjct: 184 NHK--KWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSF 236 >UniRef50_Q7MCI9 Putative outer membrane protein n=4 Tax=Gammaproteobacteria RepID=Q7MCI9_VIBVY Length = 247 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 30/247 (12%) Query: 3 KINAIIL--LSSLTSASVFAG-AYVENREAYNLASDQGEVMLRVGYNFDMG--------- 50 KI A++ L ++T+ FAG ++ R +N ASD + ++ + FD G Sbjct: 2 KIKALLCSTLVAVTALPTFAGETKLDVRFGHNTASDIRDSRVKFMHTFDTGFYFSAEAAQ 61 Query: 51 ---AGIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVY 107 G N N ++ LK E E Y F + PG ++ + Y Sbjct: 62 IHNDGYFAGNDSNDPDKNGLKAAAQEFEATYK-FDLGEDWYWAPGLVMVTAPNWTEYRPY 120 Query: 108 LDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGE--LDNNDTYEIGT----YWNFKITDKFS 161 L + F +LT R RYN +N D +G+ LD + T + W K Sbjct: 121 LKLGTTFDNGVSLTGRYRYNWSN----DENGKNYLDGSGTTRGASNQFDLWISKNFGDVG 176 Query: 162 YTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNV--EPYHREQ 219 + P Y + + + G+D +WE T Y++NE W PY EL +D E +RE Sbjct: 177 LMYNPRYRYQ-DGVDQGTGRDDYWEHTIMVNYKLNETWTPYMELVSVDETYVDEQGNREN 235 Query: 220 N-QIRIG 225 + +R+G Sbjct: 236 DYAVRLG 242 >UniRef50_A4WE32 Oligogalacturonate-specific porin n=9 Tax=Enterobacteriaceae RepID=A4WE32_ENT38 Length = 228 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 14/230 (6%) Query: 8 ILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRE--- 64 ++L+SL AS A A + + S + V + F G G + + + Sbjct: 6 LVLASLVGASFAAQAVTVDLRHEYIDSGSNADRVAVSHRFANGFGFSVEAKWKSGGDKAD 65 Query: 65 ----DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 D + +G+ + W +K TD +++ PG + + +L Y F F + Sbjct: 66 RPFSDMVGNGHEDQISW--RWKATDNISLTPGFTLESNDSRTIYKPFLHAQYSFDNGFYV 123 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 R RY++ Y S S E D +D G W + F Y SN Sbjct: 124 AARYRYDYTRYPS---SAEKD-DDKVNRGDAWLGWVMGDFRTELNYVYAKSSEGTIRSNN 179 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 KD+ E Y+I+++W PY E+ ++ + R Q + R+G Y F Sbjct: 180 KDYSEEYNAKLAYKIDKNWSPYVEVGNVNGSKTTDER-QTRFRLGVAYSF 228 >UniRef50_UPI00018269B6 hypothetical protein EcanA3_20802 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI00018269B6 Length = 248 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 26/243 (10%) Query: 4 INAIILLSSLTSASVFAG-AYVENREAYNLASDQGEVMLRV------GYNFDMGAG---- 52 I A + + L S + G V+ R +N SD + ++V G+ F + A Sbjct: 6 IKASCISALLISTQGWCGNTAVDLRFGHNTRSDVNDSRIKVMHQADNGFYFSVEAAQNHN 65 Query: 53 -IMLTNTYNFQREDE-LKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDV 110 +T + +D+ L EIE + F + L + PG + + + ++ Sbjct: 66 DTFFGDTDRYNADDKGLTEAAQEIETRWR-FDLGNGLAVAPGMVTVFTASNTHYRPFIQG 124 Query: 111 NYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNN-----DTYEIGTYWNFKITDKFSYTFE 165 F NL+ R RYN N + +D +LD + ++++ ++ + I KF ++ Sbjct: 125 WKAFDNGLNLSTRYRYNTVNDAHSD--KQLDGSGYTRRESHQFDIWFAYNIG-KFGMSYN 181 Query: 166 PHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDR---NVEPYHREQNQI 222 P + + N + G D +WE T F Y++++ W PY EL LD+ + + H+ + Sbjct: 182 PRFRWQDN-VDQGTGDDTYWEHTVAFNYKLDDGWTPYVELVSLDKTYIDDDGNHKNDYAV 240 Query: 223 RIG 225 R+G Sbjct: 241 RLG 243 >UniRef50_A5KUM1 Putative outer membrane protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KUM1_9GAMM Length = 231 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 10/217 (4%) Query: 20 AGAYVENREAYNLASDQGEVMLRVGYNFDMGAGI-MLTNTYNFQRE-DELKHGYNEIEGW 77 AG YV+ R Y +DQ VG++FD G G+ LTN + DE K E + Sbjct: 19 AGGYVDLRAEYRSTTDQYRSRFIVGHHFDNGYGLETLTNVRHAAGAYDETKVINTEFTHY 78 Query: 78 YPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLS 137 Y + D + PG ++N + + YL +NY F + R RY ++S+ L Sbjct: 79 YT-YAINDNFMLNPGVVMNFQGSNTFLMPYLKLNYNFDNGLFVHGRYRY---DFSTEALV 134 Query: 138 GELDNNDTYEIGTY--WNFKITDKFSYTFEPHYFMRVNDFNS--SNGKDHHWEITNTFRY 193 + N +T + Y W TDK+ ++ YF ++ + + G H E T Y Sbjct: 135 NDYGNEETAKRNRYDIWTGYNTDKYMISYAFTYFDQITHHTTELATGDLHAREHTVKAVY 194 Query: 194 RINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + PY E+ D + + R+G + F Sbjct: 195 KWKPTVRPYAEVVDADTVQSENDKTDWRFRVGVNFSF 231 >UniRef50_A7MI99 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MI99_ENTS8 Length = 247 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 25/226 (11%) Query: 4 INAIILLSSLTSASVFAGA-YVENREAYNLASDQGEVMLRVGYN----FDMGAGIMLTNT 58 + + + + S S +AG +V+ R A+N+ +D E ++ + F A ++ Sbjct: 5 LKVCLCIPVIYSVSGWAGTTWVDVRGAHNIRADTNETRIKFMHQATNGFYFSAEATQSHN 64 Query: 59 YNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSG-GAVYLDVNYKFVPW 117 +F +++ + G + +G + + + P L N SI G V+ N + P+ Sbjct: 65 ESFFGDEDSRDG--KEDGVTGVSQEIETRWQFP--LGNGYSIAPGLTTVFTKTNTHYRPF 120 Query: 118 F----------NLTVRNRYNHNNYSSTDL---SGELDNNDTYEIGTYWNFKITDKFSYTF 164 NL R RYN N + +D S E +++ + + I +F ++ Sbjct: 121 IQGWKAFDNGINLAARYRYNTVNDAHSDRKLDSDEYTRRKSHQFDIWIAYNI-GRFGMSW 179 Query: 165 EPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDR 210 P F + + G+D +WE T F Y++++ W PY EL LD+ Sbjct: 180 NPR-FRYQDGVDQGTGRDTYWEHTLAFSYKMDDDWTPYIELGSLDK 224 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q8X8F2 Porin ompL n=44 Tax=Enterobacteriaceae RepID=OMP... 268 8e-71 UniRef50_Q9L7R3 Porin ompL n=35 Tax=Enterobacteriaceae RepID=OMP... 262 8e-69 UniRef50_P69857 Probable N-acetylneuraminic acid outer membrane ... 220 3e-56 UniRef50_A8AGB9 Putative uncharacterized protein n=1 Tax=Citroba... 213 4e-54 UniRef50_UPI0001C33DB2 oligogalacturonate-specific porin protein... 211 1e-53 UniRef50_A8AJA0 Putative uncharacterized protein n=3 Tax=Enterob... 204 2e-51 UniRef50_B5Y2Y8 Oligogalacturonate-specific porin protein (KdgM)... 186 4e-46 UniRef50_A4WE32 Oligogalacturonate-specific porin n=9 Tax=Entero... 183 4e-45 UniRef50_UPI00018269B6 hypothetical protein EcanA3_20802 n=1 Tax... 181 2e-44 UniRef50_Q7MCI9 Putative outer membrane protein n=4 Tax=Gammapro... 180 4e-44 Sequences not found previously or not previously below threshold: UniRef50_A7MI99 Putative uncharacterized protein n=1 Tax=Cronoba... 159 8e-38 UniRef50_A5KUM1 Putative outer membrane protein n=1 Tax=Vibriona... 114 3e-24 UniRef50_B4TSP1 Oligogalacturonate-specific porin n=25 Tax=Salmo... 102 1e-20 UniRef50_Q934G3 Oligogalacturonate-specific porin kdgM n=40 Tax=... 100 5e-20 UniRef50_A6CXP1 Putative outer membrane protein n=1 Tax=Vibrio s... 99 7e-20 UniRef50_P0A1U9 Uncharacterized protein yiiY n=38 Tax=Enterobact... 92 1e-17 UniRef50_C6DG01 Oligogalacturonate-specific porin n=39 Tax=Enter... 91 4e-17 UniRef50_Q9RGQ2 Alginate lyase AlyVGIII n=1 Tax=Vibrio haliotico... 86 7e-16 UniRef50_A5W1L4 Oligogalacturonate-specific porin n=5 Tax=Pseudo... 86 1e-15 UniRef50_UPI000197C7F9 hypothetical protein PretD1_05772 n=1 Tax... 84 3e-15 UniRef50_D0X8V1 Putative uncharacterized protein n=1 Tax=Vibrio ... 81 2e-14 UniRef50_D0ZBP0 Putative uncharacterized protein n=2 Tax=Edwards... 77 4e-13 UniRef50_D0Z3T4 N-acetylneuraminic acid outer membrane channel p... 76 1e-12 UniRef50_D0X276 Putative uncharacterized protein n=1 Tax=Vibrio ... 74 5e-12 UniRef50_B7VN43 Putative uncharacterized protein n=6 Tax=Vibrion... 72 2e-11 UniRef50_D0KF31 Oligogalacturonate-specific porin n=5 Tax=Pectob... 66 9e-10 UniRef50_B3HTB9 Oligogalacturonate-specific porin protein n=1 Ta... 65 2e-09 UniRef50_A3UR43 Putative oligogalacturonate specific porin n=1 T... 64 4e-09 UniRef50_A6B1X6 Oligogalacturonate-specific porin protein (KdgM)... 64 4e-09 UniRef50_Q1Z3D7 Putative uncharacterized protein n=1 Tax=Photoba... 62 2e-08 UniRef50_A6VRQ2 Oligogalacturonate-specific porin n=4 Tax=Gammap... 62 2e-08 UniRef50_D0KF32 Oligogalacturonate-specific porin n=5 Tax=Pectob... 59 9e-08 UniRef50_B7VKI6 Putative uncharacterized protein n=17 Tax=Gammap... 48 2e-04 UniRef50_D0XGT9 Putative uncharacterized protein n=1 Tax=Vibrio ... 47 5e-04 UniRef50_C5BBJ1 Oligogalacturonate-specific porin KdgM n=7 Tax=E... 44 0.004 UniRef50_C5D0H1 Conserved repeat domain protein n=1 Tax=Variovor... 43 0.008 UniRef50_C9QGR6 Putative uncharacterized protein n=1 Tax=Vibrio ... 42 0.017 >UniRef50_Q8X8F2 Porin ompL n=44 Tax=Enterobacteriaceae RepID=OMPL_ECO57 Length = 230 Score = 268 bits (686), Expect = 8e-71, Method: Composition-based stats. Identities = 214/230 (93%), Positives = 219/230 (95%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK INAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTY Sbjct: 1 MKNINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF PWFNL Sbjct: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNL 120 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 TVRNR+NHNNYSSTDL+G+LDNND+YEIG YWNF ITDKFSYTFEPHYF +NDFNS NG Sbjct: 121 TVRNRFNHNNYSSTDLNGDLDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNINDFNSGNG 180 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 HHWEITNTFRYRINEHWLPY ELRWLDRNVEPYHREQNQIRIGTKYFF Sbjct: 181 TKHHWEITNTFRYRINEHWLPYIELRWLDRNVEPYHREQNQIRIGTKYFF 230 >UniRef50_Q9L7R3 Porin ompL n=35 Tax=Enterobacteriaceae RepID=OMPL_SALTY Length = 230 Score = 262 bits (669), Expect = 8e-69, Method: Composition-based stats. Identities = 203/230 (88%), Positives = 212/230 (92%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK +N +++L+S+ S SVFAGAYVENREAYNLASDQ E MLRVGYN DMGAGIMLTNTY Sbjct: 1 MKSLNTLVILTSVISTSVFAGAYVENREAYNLASDQMEFMLRVGYNSDMGAGIMLTNTYT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 QR+DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF PWFNL Sbjct: 61 LQRDDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNL 120 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 TVRNRYNHNNYSSTDL+GELDNND+YEIG YWNF ITDKFSYTFEPHYF VNDFNSSNG Sbjct: 121 TVRNRYNHNNYSSTDLNGELDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNVNDFNSSNG 180 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 HHWEITNTFRYRINEHWLPYFELRWLDRNV PYHREQNQIRIG KYFF Sbjct: 181 TKHHWEITNTFRYRINEHWLPYFELRWLDRNVGPYHREQNQIRIGAKYFF 230 >UniRef50_P69857 Probable N-acetylneuraminic acid outer membrane channel protein nanC n=57 Tax=Bacteria RepID=NANC_ECO57 Length = 238 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 8/233 (3%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAG-IMLTNTYNF 61 KI + +LL +S + A ++ R Y S E L+V + G M +NT+N Sbjct: 5 KILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNT 64 Query: 62 QREDELKHGY---NEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWF 118 +++ ++ ++E Y + K D+ T++PG L + S G+ Y+ +++ Sbjct: 65 IHDNKKENAALNDVQVEVNYAI-KLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDL 123 Query: 119 NLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSS 178 N +R RY+ Y DLSG++ ++ + Y + I F++ ++ + + ND+ + Sbjct: 124 NFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYA 183 Query: 179 NGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE---QNQIRIGTKY 228 N K E +Y + PY E +LDR R+ +N RIG + Sbjct: 184 NHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSF 236 >UniRef50_A8AGB9 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AGB9_CITK8 Length = 265 Score = 213 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 20/245 (8%) Query: 3 KINAIILLSSLTSASVFAGAYV-------------ENREAYNLASDQGEVMLRVGYNFDM 49 ++ A +L S++ +F GA + + R YN+ + E +V ++ Sbjct: 20 RLLAGVLFMSMSKKCLFTGAVIFFSFTPFVHAVQFDVRGGYNIENHSYESRFKVSNSWSS 79 Query: 50 GAG-IMLTNTYNFQRE-DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVY 107 G M T++ N D++ YNE+E Y + D+ + PGG+I+ + G+ Y Sbjct: 80 GWWASMETDSNNGSPSLDDMTSSYNEMETNYT-WHINDRFALVPGGVIHWSNSGTQLRPY 138 Query: 108 LDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPH 167 + +NYK F+ +R R +H+NY D +G+ +++ + I + +KI +++ ++ Sbjct: 139 IRLNYKISERFSSGIRYRLDHHNYDVVDNTGDTIHDNEHRIDLFLGYKINQDWNFMWQGT 198 Query: 168 YFMRVN-DFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEP---YHREQNQIR 223 +M + D +NGK E T +YR NE++ PYFE +LD + ++IR Sbjct: 199 AYMHQDPDLEYNNGKRWATENAFTIKYRWNEYFSPYFEYDYLDEQSNYKGEKGKPDSRIR 258 Query: 224 IGTKY 228 +G + Sbjct: 259 VGVTF 263 >UniRef50_UPI0001C33DB2 oligogalacturonate-specific porin protein (KdgM) n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33DB2 Length = 232 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 8/233 (3%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT--NTYN 60 K A++L T + A + + R Y AS E ++ +F G + + N Sbjct: 2 KRTALVLAVCCTPLASHAMTF-DMRGGYKEASHTYESRFKMSQSFQSGYWLSMETDNKQG 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 D+ YNEIEG Y +K L IQPG + + S G+ Y+ + Sbjct: 61 NDNYDQSTTDYNEIEGNYK-YKLNPALAIQPGMVYHWSSAGTQIRPYVKFIWNMTDSVYS 119 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 +R RY+ N Y S DLSG +D + Y+ ++ +K++ P ++ VNDF+ +NG Sbjct: 120 GIRFRYDWNQYDSVDLSGNMDKGSVERVDLYFGWQ-NEKWNIQDNPVFYRYVNDFHYNNG 178 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE---QNQIRIGTKYFF 230 K +E +Y++N+ W PY E ++++ + +N+ R+G F Sbjct: 179 KKSSYENDLVIKYKLNKTWQPYVEWDYMEQQGKYDGESGLTENRFRVGLTINF 231 >UniRef50_A8AJA0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AJA0_CITK8 Length = 263 Score = 204 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 30/257 (11%) Query: 2 KKINAIILLSSLT--SASVFAG------------------AYVENREAYNLASDQGEVML 41 K +N +L ++L SASVFA Y R Y AS++ L Sbjct: 4 KNMNTALLAAALVMPSASVFADNNSHSTTAPQAKEKPFTTVYFAPRTQYRTASERFLQRL 63 Query: 42 RVGYNFDMGAGIMLTNTYNFQREDEL-------KHGYNEIEGWYPLFKPTDKLTIQPGGL 94 + I ++F+ + +L K Y E E P ++PG + Sbjct: 64 MLTGVVQDPNSIFARMYWSFETDSDLGKNMEQWKSSYEEAEFNKPFPLGESDFWLEPGVV 123 Query: 95 INDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNF 154 + +S GS YL + Y F P +R RYNH N+ S L G+ D++ + + Y Sbjct: 124 FHWESAGSRIDPYLGIGYHFDPTLGAVLRYRYNHQNHDSQTLQGDWDDSSEHRVDIYLTK 183 Query: 155 KITDKFSYTFEPHYFMRV--NDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNV 212 T F + P Y+ + + F +NGK+H + F + + P+FEL +LD Sbjct: 184 YFTPDFWVQYNPTYYSKTHGDKFEYANGKNHTLQHNFVFNFHATPRFYPFFELGYLDEYK 243 Query: 213 EPYH-REQNQIRIGTKY 228 + + + QIR+G KY Sbjct: 244 DGDDTKNEYQIRVGFKY 260 >UniRef50_B5Y2Y8 Oligogalacturonate-specific porin protein (KdgM) n=2 Tax=Klebsiella RepID=B5Y2Y8_KLEP3 Length = 250 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 22/251 (8%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 M+ A I+ L + + R Y S E +V ++ G + Sbjct: 1 MRTKTAFIMCCVLGIPAAGHALTFDVRGGYRAGSHSYESRYKVSQGWETGWWASMEMDNK 60 Query: 61 FQRED-----------------ELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSG 103 + + + YNEIE Y + DK +QPGG+ + S G+ Sbjct: 61 NNKNNHQGNQGTDRADGSHSFGDSTVDYNEIEANYS-WPFADKWALQPGGIYHWSSKGTQ 119 Query: 104 GAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYT 163 YL VNYK P +R RY++N Y + + +GE + + Y +K ++S Sbjct: 120 LRPYLRVNYKATPDLTFGLRYRYDYNTYETVNSAGESHRDSVNRLDLYVAYKFNAQWSAL 179 Query: 164 FEPHYFMRVN-DFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE---Q 219 ++ + VN D+ N K E T RY+ N+ + PY E +L + + + Sbjct: 180 YQGTVYRHVNDDYKYKNDKSSATENALTLRYKWNDWFSPYIEYDYLGKQGYHDGQNKISE 239 Query: 220 NQIRIGTKYFF 230 ++ RIG + Sbjct: 240 SRYRIGMTFTL 250 >UniRef50_A4WE32 Oligogalacturonate-specific porin n=9 Tax=Enterobacteriaceae RepID=A4WE32_ENT38 Length = 228 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 14/234 (5%) Query: 4 INAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQR 63 + ++L+SL AS A A + + S + V + F G G + + Sbjct: 2 LKKSLVLASLVGASFAAQAVTVDLRHEYIDSGSNADRVAVSHRFANGFGFSVEAKWKSGG 61 Query: 64 E-------DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVP 116 + D + +G+ + W +K TD +++ PG + + +L Y F Sbjct: 62 DKADRPFSDMVGNGHEDQISW--RWKATDNISLTPGFTLESNDSRTIYKPFLHAQYSFDN 119 Query: 117 WFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFN 176 F + R RY++ Y S S E D++ W + F Y Sbjct: 120 GFYVAARYRYDYTRYPS---SAEKDDDKVNRGD-AWLGWVMGDFRTELNYVYAKSSEGTI 175 Query: 177 SSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 SN KD+ E Y+I+++W PY E+ ++ + R Q + R+G Y F Sbjct: 176 RSNNKDYSEEYNAKLAYKIDKNWSPYVEVGNVNGSKTTDER-QTRFRLGVAYSF 228 >UniRef50_UPI00018269B6 hypothetical protein EcanA3_20802 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI00018269B6 Length = 248 Score = 181 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 22/242 (9%) Query: 4 INAIILLSSLTSASVFAG-AYVENREAYNLASDQGEVMLRVGYNFDMGAGI--------- 53 I A + + L S + G V+ R +N SD + ++V + D G Sbjct: 6 IKASCISALLISTQGWCGNTAVDLRFGHNTRSDVNDSRIKVMHQADNGFYFSVEAAQNHN 65 Query: 54 --MLTNTYNFQREDE-LKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDV 110 +T + +D+ L EIE + F + L + PG + + + ++ Sbjct: 66 DTFFGDTDRYNADDKGLTEAAQEIETRWR-FDLGNGLAVAPGMVTVFTASNTHYRPFIQG 124 Query: 111 NYKFVPWFNLTVRNRYNHNNYSSTDLSGE---LDNNDTYEIGTYWNFKITDKFSYTFEPH 167 F NL+ R RYN N + +D + ++++ ++ + I KF ++ P Sbjct: 125 WKAFDNGLNLSTRYRYNTVNDAHSDKQLDGSGYTRRESHQFDIWFAYNI-GKFGMSYNPR 183 Query: 168 YFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDR---NVEPYHREQNQIRI 224 + + N + G D +WE T F Y++++ W PY EL LD+ + + H+ +R+ Sbjct: 184 FRWQDN-VDQGTGDDTYWEHTVAFNYKLDDGWTPYVELVSLDKTYIDDDGNHKNDYAVRL 242 Query: 225 GT 226 G Sbjct: 243 GI 244 >UniRef50_Q7MCI9 Putative outer membrane protein n=4 Tax=Gammaproteobacteria RepID=Q7MCI9_VIBVY Length = 247 Score = 180 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 26/246 (10%) Query: 3 KINAIIL--LSSLTSASVFAG-AYVENREAYNLASDQGEVMLRVGYNFDMGA-------- 51 KI A++ L ++T+ FAG ++ R +N ASD + ++ + FD G Sbjct: 2 KIKALLCSTLVAVTALPTFAGETKLDVRFGHNTASDIRDSRVKFMHTFDTGFYFSAEAAQ 61 Query: 52 ----GIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVY 107 G N N ++ LK E E Y F + PG ++ + Y Sbjct: 62 IHNDGYFAGNDSNDPDKNGLKAAAQEFEATYK-FDLGEDWYWAPGLVMVTAPNWTEYRPY 120 Query: 108 LDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIG----TYWNFKITDKFSYT 163 L + F +LT R RYN +N + LD + T W K Sbjct: 121 LKLGTTFDNGVSLTGRYRYNWSNDENGKNY--LDGSGTTRGASNQFDLWISKNFGDVGLM 178 Query: 164 FEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNV---EPYHREQN 220 + P Y + + + G+D +WE T Y++NE W PY EL +D + Sbjct: 179 YNPRYRYQ-DGVDQGTGRDDYWEHTIMVNYKLNETWTPYMELVSVDETYVDEQGNRENDY 237 Query: 221 QIRIGT 226 +R+G Sbjct: 238 AVRLGF 243 >UniRef50_A7MI99 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MI99_ENTS8 Length = 247 Score = 159 bits (402), Expect = 8e-38, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 22/243 (9%) Query: 4 INAIILLSSLTSASVFAGAY-VENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTY--- 59 + + + + S S +AG V+ R A+N+ +D E ++ + G T Sbjct: 5 LKVCLCIPVIYSVSGWAGTTWVDVRGAHNIRADTNETRIKFMHQATNGFYFSAEATQSHN 64 Query: 60 ---------NFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDV 110 +ED + EIE + F + +I PG + ++ Sbjct: 65 ESFFGDEDSRDGKEDGVTGVSQEIETRWQ-FPLGNGYSIAPGLTTVFTKTNTHYRPFIQG 123 Query: 111 NYKFVPWFNLTVRNRYNHNNYSSTDLSGELD---NNDTYEIGTYWNFKITDKFSYTFEPH 167 F NL R RYN N + +D + D +++ + + I +F ++ P Sbjct: 124 WKAFDNGINLAARYRYNTVNDAHSDRKLDSDEYTRRKSHQFDIWIAYNI-GRFGMSWNPR 182 Query: 168 YFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPY---HREQNQIRI 224 + + + + G+D +WE T F Y++++ W PY EL LD+ H+ + R+ Sbjct: 183 FRYQ-DGVDQGTGRDTYWEHTLAFSYKMDDDWTPYIELGSLDKTYVDDHGTHKNEFVGRL 241 Query: 225 GTK 227 G Sbjct: 242 GIT 244 >UniRef50_A5KUM1 Putative outer membrane protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KUM1_9GAMM Length = 231 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 4/214 (1%) Query: 20 AGAYVENREAYNLASDQGEVMLRVGYNFDMGAGI-MLTNTYNFQREDELKHGYNEIEGWY 78 AG YV+ R Y +DQ VG++FD G G+ LTN + + N Y Sbjct: 19 AGGYVDLRAEYRSTTDQYRSRFIVGHHFDNGYGLETLTNVRHAAGAYDETKVINTEFTHY 78 Query: 79 PLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSG 138 + D + PG ++N + + YL +NY F + R RY+ + + + G Sbjct: 79 YTYAINDNFMLNPGVVMNFQGSNTFLMPYLKLNYNFDNGLFVHGRYRYDFSTEALVNDYG 138 Query: 139 ELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRV--NDFNSSNGKDHHWEITNTFRYRIN 196 + W TDK+ ++ YF ++ + + G H E T Y+ Sbjct: 139 NEETAKRNRYDI-WTGYNTDKYMISYAFTYFDQITHHTTELATGDLHAREHTVKAVYKWK 197 Query: 197 EHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 PY E+ D + + R+G + F Sbjct: 198 PTVRPYAEVVDADTVQSENDKTDWRFRVGVNFSF 231 >UniRef50_B4TSP1 Oligogalacturonate-specific porin n=25 Tax=Salmonella enterica RepID=B4TSP1_SALSV Length = 230 Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 80/223 (35%), Gaps = 17/223 (7%) Query: 16 ASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRED--------EL 67 +S A ++ R Y + + + + G G + + D +L Sbjct: 17 SSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASVKSGGVDGEQDKHLSDL 76 Query: 68 KHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYN 127 E+ Y +K TD +QPG + S YL Y F + R RY+ Sbjct: 77 VANAIELGVSYN-YKVTDHFVLQPGFIFESGPDTSIYKPYLRGQYNFDSGVYMAGRYRYD 135 Query: 128 HNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEI 187 + ++ D+ T TY + + E ++ +D + K ++E Sbjct: 136 YARKTANYN----DDEKTNRFDTYIGYVFDE---LKLEYNFTWMDSDQIKFDNKKTNYEH 188 Query: 188 TNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 +++N+ + PY E+ + R Q + R+G +Y F Sbjct: 189 NVALAWKLNKSFTPYVEVGNVAVRNNTDER-QTRYRVGLQYHF 230 >UniRef50_Q934G3 Oligogalacturonate-specific porin kdgM n=40 Tax=Enterobacteriaceae RepID=KDGM_DICD3 Length = 236 Score = 100 bits (248), Expect = 5e-20, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 10/238 (4%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK + ++SL S + A + E + A + L + + F G G+ + Sbjct: 1 MKIKLLTLAVASLVSVNALAVSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWA 60 Query: 61 FQREDELKHG-YNEIEGWYP------LFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYK 113 D+ + +NE ++K +I+PG + S + YL Sbjct: 61 QSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGFSLESGSSNNNYRPYLRGRAN 120 Query: 114 FVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVN 173 ++ +R R + +S ++ + + Y + ++ ++ +E Y + Sbjct: 121 VTDDLSVALRYR-PYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTS 179 Query: 174 D-FNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 S+ D+ Y+ +++W PY E+ + + R Q + R+G +Y F Sbjct: 180 GKTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDER-QTRYRVGVQYSF 236 >UniRef50_A6CXP1 Putative outer membrane protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CXP1_9VIBR Length = 237 Score = 99.4 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 18/220 (8%) Query: 23 YVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRE----DELKHGYNEIEGWY 78 YV+ R AY + E +R G++F I L T + E E Y Sbjct: 24 YVDVRGAYKTEAKTYETRVRAGFDFAEDWQIHLEGTQAQGDKLFSNSGKSVAAFETELNY 83 Query: 79 PLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSG 138 + D T+ PG + + S YL Y F R RY +S+ + Sbjct: 84 N-WAINDNFTLTPGFVYWNGSDHMEYRPYLKATYAEGN-FYTAARYRY---QAASSSTTP 138 Query: 139 ELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNS-SNGK---DHHWEITNTFRYR 194 + NDT ++ + + + F+ + P Y + + NG D WE T +Y Sbjct: 139 GVKTNDTNQVDLWVGYNLN-DFALEYNPAYINQKDGGAYTGNGTDKADTKWEHTFQVKYT 197 Query: 195 INEHWLPYFELRWLDRNVE----PYHREQNQIRIGTKYFF 230 E W PY + + LD+ + +N+IR G + F Sbjct: 198 GFESWAPYVDYQILDKTYANAQYTDFKTENRIRAGVTFNF 237 >UniRef50_P0A1U9 Uncharacterized protein yiiY n=38 Tax=Enterobacteriaceae RepID=YIIY_SALTI Length = 227 Score = 92.1 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 84/233 (36%), Gaps = 17/233 (7%) Query: 4 INAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQR 63 ++ LL L + A YV+ R Y S + + F G G + Sbjct: 6 RKSLFLLLPLVVTNAHA-VYVDVRHEYLDDSKANYDRAYISHRFANGVGFAIEAISKSGG 64 Query: 64 EDELKHGYNEIEGWYPLFKP-----TDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWF 118 +D K +N++E + T + QPG ++ + S Y + + Sbjct: 65 DDTNK-AFNDLETQGNEYTISYQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESW 123 Query: 119 NLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNF-KITDKFSYTFEPHYFMRVNDFNS 177 + R R+ + SS D++ + + + ++ + + + ++ Sbjct: 124 WVGARYRFEYVRRSSDI----RDDDTINRMDVWAGYKWNNFDWTIE---GIYKKADKYDL 176 Query: 178 SNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 +G ++E Y I++ W P+ E+ + N R Q + R+G Y F Sbjct: 177 YDGGKDNYEYNFRTAYIIDQ-WSPFVEVGNVSVNSNSDER-QTRFRVGIGYTF 227 >UniRef50_C6DG01 Oligogalacturonate-specific porin n=39 Tax=Enterobacteriaceae RepID=C6DG01_PECCP Length = 242 Score = 90.5 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 85/243 (34%), Gaps = 17/243 (6%) Query: 4 INAIILLSSLTSA-SVFAGAYVENREAYNLASDQGE--VMLRVGYNFDMGAGIMLTNTYN 60 + +L ++TS SV A A + + + + L + + F G G+ + Sbjct: 1 MKFKLLALAVTSLISVNAMAVTIDYRHEMQDTVKNDHKDRLSMSHRFANGFGLSAEAKWK 60 Query: 61 FQREDELKHG-YNEIEGWYP------LFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYK 113 D + +NE ++ +++PG ++ S + YL Sbjct: 61 QSGSDNTPNKPFNEPVSNGTEVVASYVYNFNKTFSLEPGFSLDSSSDSNNYRPYLRGKIN 120 Query: 114 FVPWFNLTVRNRYNH---NNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFM 170 + ++R R + N ++ Y + ++K + +E Y Sbjct: 121 ITDDLSTSLRYRPYYLRKNANTTKTGPANYTKETGYNLTAVVSYKFLKDYQIDYELDYKK 180 Query: 171 RVNDFN---SSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTK 227 ++ ++ E Y+++++W PY + + + R Q + R+G + Sbjct: 181 ANKAGPSGFQADKENWKIEHDVKLAYKLDKNWKPYMAIGNVVGDKNTDER-QTRYRVGVQ 239 Query: 228 YFF 230 Y F Sbjct: 240 YSF 242 >UniRef50_Q9RGQ2 Alginate lyase AlyVGIII n=1 Tax=Vibrio halioticoli RepID=Q9RGQ2_9VIBR Length = 235 Score = 86.3 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 78/236 (33%), Gaps = 8/236 (3%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 +KK + + + A A V+ R+ Y ++VG + L Sbjct: 2 IKKHQITLFIVATVVAVSANAASVDYRQEYKHNDKSYASRVKVGSSVGHHF-FSLEAKQT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 + + + NE Y FK K I P I + + V YKF Sbjct: 61 GKPISDWQAADNEFVYGYN-FKVNKKWRITPSMPITFGNDRVTYKPQVRVQYKFDSGLTS 119 Query: 121 TVRNRYNHNNYSSTDLSGE-LDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSN 179 +R R+ NY+ + +D + Y + F + +F F + Sbjct: 120 KLRYRHEFRNYTGDKSDKDSIDRSKITGNLDYKVGALQLGFEANYAEDFFHDNEWFGGKS 179 Query: 180 GKDHH-WEITNTFRYRINEH-WLPYFELRWL---DRNVEPYHREQNQIRIGTKYFF 230 K H+ W+ Y+ + W PY EL + + Q + R+G Y F Sbjct: 180 AKRHNEWDYNVKIGYKETDWDWRPYIELGNVQYSNGPSVTNSNRQLRTRVGLTYSF 235 >UniRef50_A5W1L4 Oligogalacturonate-specific porin n=5 Tax=Pseudomonas RepID=A5W1L4_PSEP1 Length = 241 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 90/237 (37%), Gaps = 18/237 (7%) Query: 8 ILLSSLTSASVFA---GAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRE 64 ++ +S S +A A + R + +++ Y D G G Y + Sbjct: 8 LIAASTLGLSFYACADSASINYRHTFTEDDSIHSDRIKLSYRKDSGLGFAAEIKYKTAGD 67 Query: 65 ------DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWF 118 D + + +E Y +K + + T P ++ + L NYK + Sbjct: 68 REDVAYDNMVNNGHEFTVDYN-YKMSPRSTWTPAFQMDSTKDATTYKFGLKYNYKLSDTW 126 Query: 119 NLTVRNRYNHNNYS-----STDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVN 173 + R R++ N + DN +T + + + + +++ ++ +F Sbjct: 127 YVATRVRHDARNLDRDQIDHSKPDRAKDNQNTTRLEGWLGYTPSGPWAFEYQYIHF--TT 184 Query: 174 DFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 D+ + K +E +Y++N+ W P+ E+ + N R Q + R+G +Y F Sbjct: 185 DYIRYDNKKRDYEQNLIIKYKLNKQWAPFMEVGDIKVNSYTDDR-QARWRLGIQYNF 240 >UniRef50_UPI000197C7F9 hypothetical protein PretD1_05772 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C7F9 Length = 235 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 17/241 (7%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK + I +A+ Y++ R + + E +++G++ G L + Sbjct: 1 MKNLALGISTLLFCTAA--NATYIDYRHEWLGDEHRHEDRVKIGHSMQNGTYFSLEGKWR 58 Query: 61 FQRE---DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPW 117 + + L NE+E Y +K T + P ++ + + Y Sbjct: 59 SRDGGFGENLSSKGNEVEVGYK-YKATKDFVLTPSFALDSGDKDTAYKFSVKAAYNLTDD 117 Query: 118 FNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNS 177 FN+ R RY +Y +++ + DN ++ Y +K+ FS +++ Y + Sbjct: 118 FNIGTRLRYGVRHYDNSNKP-KKDNQHYWQSNFYLGYKL-QDFSLSYDFEYKFDTDYPAY 175 Query: 178 SNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE--------QNQIRIGTKYF 229 GK+ + + N+ W+PY EL ++ + Y + Q + R+G Y Sbjct: 176 K-GKEKDYAHNLNVSWVGNKTWVPYVELGYVSYDDGSYVKNGQTYRDAWQWRYRVGIAYN 234 Query: 230 F 230 F Sbjct: 235 F 235 >UniRef50_D0X8V1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X8V1_VIBHA Length = 238 Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 87/242 (35%), Gaps = 20/242 (8%) Query: 2 KKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNF 61 KK A+ + ++L + S+ A A ++ RE Y S+Q +++G G + Sbjct: 4 KKQIALAIATTLFAGSISA-ASLDFREEYKHDSEQWAGRIKIGG--STGNHYYGVEMKHT 60 Query: 62 QREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLT 121 EL+ G +E E Y FK + + I + V YKF Sbjct: 61 GNLSELQRGDSEFEYGY-HFKFDNNWRVTTSMPITFGDEAVTYKPQVRVQYKFDSGITTK 119 Query: 122 VRNRYNHNNYSSTDLSGELDNND---------TYEIGTYWNFKITDKFSYTFEPHYFMRV 172 +R R+ NY+S S LD T I WN +F + Sbjct: 120 LRYRHEFRNYASGKTSTGLDGKQHDSLNASKITGNIDYNWNAW---QFGFEANYKEDFFS 176 Query: 173 NDFNSSNGK-DHHWEITNTFRYRINEH-WLPYFELRWL--DRNVEPYHREQNQIRIGTKY 228 +++ N + W+ Y+ W PY E + + + + Q + R+G Y Sbjct: 177 DEWKLGNRDGKYEWDYNFKLGYKEKGWDWRPYVEFGNVQCNSSCDDKTSRQLRSRVGVTY 236 Query: 229 FF 230 F Sbjct: 237 SF 238 >UniRef50_D0ZBP0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0ZBP0_EDWTE Length = 236 Score = 77.1 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 87/238 (36%), Gaps = 10/238 (4%) Query: 1 MKKINAIILLSSLTSAS-VFAGAY---VENREAYNLASDQGEVMLRVGYNFDMGAGIMLT 56 M K+ + L L SAS +A Y VE R Y + +V + G Sbjct: 1 MNKLIYLAALPCLFSASPSWANNYKTSVEYRHEYREGVKKHSDRFKVFLDTGNHIGFEFD 60 Query: 57 NTYNFQREDELKHGY-NEIEGWYPLF-KPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF 114 Y + Y N E + + G + S G ++ +NY F Sbjct: 61 ARYGNHDDKAYDQMYLNGSELNVFYYTDLNKNTLLLAGNSFDFTSEGLVFIPFVRLNYTF 120 Query: 115 VPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFM--RV 172 F + R ++ +YS + + ++ E T+ +K ++++ ++ Sbjct: 121 DNGFYINGRYKWKLWDYSMKGVDQQPYHSKIQEFDTFIGYKW-GQWNFQYQLDLMREMSA 179 Query: 173 NDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 N NGK + Y I+ +W P+ E+ + + + R Q + RIG KY + Sbjct: 180 NGQPLYNGKKWDYANNFRVVYAIDANWRPFIEIGDIKESRDSD-RRQGRYRIGLKYTW 236 >UniRef50_D0Z3T4 N-acetylneuraminic acid outer membrane channel protein NanC n=7 Tax=Gammaproteobacteria RepID=D0Z3T4_LISDA Length = 242 Score = 75.5 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 92/243 (37%), Gaps = 14/243 (5%) Query: 1 MKKINAIILLSSLTSASVFA-----GAYVENREAYNLASDQGEVMLRVGYNFDMGAGIML 55 M + +++ S+L +A A +E R Y +++ ++ + G G L Sbjct: 1 MNTLTKVVIASTLVTAGGQALANDYKTTIEYRHQYVDGANKHSDRIKAFLDTGKGVGFEL 60 Query: 56 TNTYNFQREDELKHGYNEIEGWYPLF---KPTDKLTIQPGGLINDKSIGSGGAVYLDVNY 112 YN +D++ + + F + G ++ G Y+ +NY Sbjct: 61 DARYNNDEKDKMFDSMSMNGSEFSAFYYKRLNPNTVGLVGMSLDFVPDGLVYVPYVRLNY 120 Query: 113 KFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKI-TDKFSYTFEPHYFMR 171 KF + R ++ +YS T SG+ ++ E + + F Y F+ M Sbjct: 121 KFDNNIRVQGRYKWKLWDYSMTGPSGDSYHSKIQEFDAWLGYNTQNWDFQYEFQIWKEME 180 Query: 172 VNDFNSSNGKDHHWEITNTFRY----RINEHWLPYFELRWLDRNVEPYHREQNQIRIGTK 227 N + D ++ Y + + W P+ E+ + ++ +R Q + R+G K Sbjct: 181 SNALPQFDNDDINYLHNFRLMYTYKTKDDTSWRPFIEIGNVSQSRYTDNR-QTRYRMGIK 239 Query: 228 YFF 230 Y + Sbjct: 240 YTW 242 >UniRef50_D0X276 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 40B RepID=D0X276_VIBAL Length = 278 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 95/259 (36%), Gaps = 31/259 (11%) Query: 1 MKKINAIILLSSLTSASVF-AGAYVENREAYNLASDQGEVMLRVGYNFDM--------GA 51 MK + + L + T + + A ++ R Y S+ +++ + + G Sbjct: 22 MKAVTTMSLFVASTLMAGAVSAATLDYRAEYKHESETYAQRIKISGSSKINDQTKLNFGV 81 Query: 52 GIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGG--LINDKSIGSGGAVYLD 109 + N D+L G +E + W ++ + IQPG D + + Sbjct: 82 EQKFHSYDNSHFWDQLVAGDSEFD-WGVRYQINKQWFIQPGMPITFGDDDEKTTYKPQVR 140 Query: 110 VNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGT-----------------YW 152 V YK + +R R+ YS + L + + + + Sbjct: 141 VGYKSSFGLSTALRYRHEFQVYSDGAGNKTLTDGTSVSVAGKTVEQGKWTLTGSYDMRQF 200 Query: 153 NFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWL-DRN 211 + + D ++E +Y ++ S+ KD W+ Y++ + + PYFEL + ++ Sbjct: 201 DNEYLDNVKLSYEINYNKNYDEVRLSDWKDSEWDAGLIVGYQMGD-FRPYFELWNVKGKD 259 Query: 212 VEPYHREQNQIRIGTKYFF 230 Q + R+G KY F Sbjct: 260 GSTTDDRQLRTRLGLKYSF 278 >UniRef50_B7VN43 Putative uncharacterized protein n=6 Tax=Vibrionales RepID=B7VN43_VIBSL Length = 244 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 28/251 (11%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 M K +I ++S+ +A + A + R Y +DQ +++G + ++ Sbjct: 1 MNKTKIVIAVASVLAAGSVSAASFDMRHEYKSHTDQHATRVKLGDSIGN---FLVDIEAK 57 Query: 61 FQRED-----ELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFV 115 F+ ED +LK+ E+ Y D T+ G I + G + Y Sbjct: 58 FKGEDGEFMEDLKNNGWELGLNYRHV-LNDNWTMTYGMPIEGRESGVTYKPQVRATYSVD 116 Query: 116 --PWFNLTVRNRYNHNNYS---STDLSGE--LDN------NDTYEIGTYWNFKIT---DK 159 +L+ R RY+ + +TD G+ LDN ND + I + Sbjct: 117 SIDGLSLSARYRYDMRQNTKSIATDSDGKPILDNGYLTYQNDENQRRHRLTANINYSMEN 176 Query: 160 FSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQ 219 + + FE +Y+ + +D+N + D ++E+ + R I W PY E + + R + Sbjct: 177 WRFGFEGNYY-KADDYNIYDNDDTNYELNASIR-HIMGQWAPYVEFGDVSTSSTKATR-E 233 Query: 220 NQIRIGTKYFF 230 + R+G Y F Sbjct: 234 LRSRVGLTYSF 244 >UniRef50_D0KF31 Oligogalacturonate-specific porin n=5 Tax=Pectobacterium RepID=D0KF31_PECWW Length = 352 Score = 66.3 bits (160), Expect = 9e-10, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 89/274 (32%), Gaps = 46/274 (16%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAY------NLASDQGEVMLRVGYNFDMGAGIM 54 MK +L+ A A + + + + + +++ + G Sbjct: 81 MKIYTRNLLIVCAGFAPFLTQAETDGKTTFQYEHNWKTEARRHADSIKLIHKKTSGWSYE 140 Query: 55 LTNTYNFQREDELKHGYNEIEGWY------PLFKPTDKLTIQPGGLINDKSIGSGGAVYL 108 + + + Y++++G FK + T+ P + + L Sbjct: 141 VKFSTSAGGTSNYDVAYDDMQGGSGGMVIGKDFKLSKAATLTPSFEFSIGNSTMMYQSGL 200 Query: 109 DVNYKFVPWFNLTVRNRYNH------NNYSSTDLSGE----------LDNNDTYEIGTYW 152 Y+ ++ R RY + + YS+ S + + + + Sbjct: 201 KYGYRINSDWSTYGRYRYEYKKPSRSSRYSTISASDKYGHAGESYLSKSDTGRHRLDAGV 260 Query: 153 NFKITDKFSYTFEPHYFMRVNDFN----------------SSNGKDHHWEITNTFRYRIN 196 + DK + T+ +Y++ N NGK + E +Y+ N Sbjct: 261 TYSGLDKINLTYVFNYYIGDNTTKSYKYSKGEFTEREYAIYDNGKTDY-EHQFKVQYKFN 319 Query: 197 EHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + PY E ++++ R Q +I++G Y F Sbjct: 320 KQLTPYIEYDDINQSSTSSSR-QGKIKVGFNYVF 352 >UniRef50_B3HTB9 Oligogalacturonate-specific porin protein n=1 Tax=Escherichia coli F11 RepID=B3HTB9_ECOLX Length = 231 Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 82/233 (35%), Gaps = 13/233 (5%) Query: 9 LLSSLTSASVFAG---AYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRED 65 +LS L+ V A +++ R Y + + G F G G+M YN D Sbjct: 1 MLSCLSPTLVCAEQPHGFIDYRHEYLDDTRTHADRVEFGTFFSNGIGLMGELRYNTDEGD 60 Query: 66 ELKHGYNEIEGW-------YPLFKPTDK-LTIQPGGLINDKSIGSGGAVYLDVNYKFVPW 117 + K ++ Y DK ++P ++ S L Y F Sbjct: 61 KDKWDPSQFGNNGTGLSVVYRFKPLDDKKFWLEPMFWLDTTQYWSTYEYGLSAGYDFSKE 120 Query: 118 FNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNS 177 + ++ R RY+ + ++ G +++ W K ++ ++ + N + + Sbjct: 121 WKVSGRFRYDMDK-ATDKSKGYGNDDRNNRRYDVWIDYRPQKTNFQYQLNLVYYNNGYLT 179 Query: 178 SNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 N ++ + Y++ W+PY + + Q + R G Y F Sbjct: 180 WNDGHKNYTASFKVGYKMG-SWIPYMSIADYKGVDKTSSNRQIRWRWGLTYTF 231 >UniRef50_A3UR43 Putative oligogalacturonate specific porin n=1 Tax=Vibrio splendidus 12B01 RepID=A3UR43_VIBSP Length = 286 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 82/277 (29%), Gaps = 59/277 (21%) Query: 11 SSLTSASVFAGAYVENREAYNLASD-------------QGEVMLRVGYNFDMGAGI---- 53 + A AGA ++ R Y A+D + + +++G +F + Sbjct: 12 ACTLLAGTAAGASLDYRYEYRAATDYTKTNGDTAHVDARHQHRVKLGESFKLSDKWKHST 71 Query: 54 -----MLTNTYNFQREDELKHGYNEIEG-------------WYPLFKPTDKLTIQPGGLI 95 + + + N +K + +Q G I Sbjct: 72 GLELKFHGDDSYYDEDSGSVKSANSQSFYDGNWYIYGMEIDNTATYKIDNNWYLQMGMPI 131 Query: 96 ------------NDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNN 143 + K V YK +R R+ + ++ + G+ D+ Sbjct: 132 AWDWDEPNANDGDWKMKKVTFKPQFRVGYKADMGLTTAIRYRHEYADFRNHTQFGDKDSE 191 Query: 144 DTYEIGTYWNFKIT----------DKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRY 193 + + K+T K ++E +Y +++ N D W+ Y Sbjct: 192 TGERLESAQKSKVTLTGSYKIESLPKLGLSYEANYVKSLDNVLLYNSDDWEWDAGLKVNY 251 Query: 194 RINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + W P+ E+ W + + R+G Y F Sbjct: 252 KFG-SWKPFAEI-WSSDISSSSKDREAKYRVGIAYSF 286 >UniRef50_A6B1X6 Oligogalacturonate-specific porin protein (KdgM) n=4 Tax=Vibrionaceae RepID=A6B1X6_VIBPA Length = 227 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 95/236 (40%), Gaps = 22/236 (9%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAY--NLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 + +LL ++TS + A A V+ R Y + D+ + V + FD G + +N Sbjct: 6 RYLTSVLLLAMTS-GLAAAASVDIRHEYVPDRDGDEHRDRIYVSHRFDNQIGFSVEAKWN 64 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVY-LDVNYKFVPWFN 119 + ++ + + +E Y +K TD ++ PG I+ G+ Y L YK ++ Sbjct: 65 Y-KDGHMGNAGHETGVSYR-WKATDNFSLTPGINIDASPSGASVFKYNLTGAYKINDEWD 122 Query: 120 LTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSS- 178 + R R+ + N D++ ++ Y N K ++ + ++ Sbjct: 123 VAARIRHGYKN---------TDDSRYNQLNLYANRKF--EWGKLGVEAEYKDIHGGEGGW 171 Query: 179 NGKDHHWEITNTFRY-RINEHWLPYFELRWLDRNVEPYH-REQN--QIRIGTKYFF 230 K H I Y ++ +P+F + + + +++ + R+G KY F Sbjct: 172 KDKGHDQLIDFKGEYTKLESGVIPFFAIAAITHKGDGSEFKDEYVPRFRVGLKYNF 227 >UniRef50_Q1Z3D7 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z3D7_PHOPR Length = 282 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 92/290 (31%), Gaps = 68/290 (23%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MKK +I + + L+S + FAG + E + E ++VG++ + G + Y+ Sbjct: 1 MKKTLSIAVAALLSSTA-FAGTFAEV-----SQATDNETAVKVGHSLENGISFDIEGVYS 54 Query: 61 FQR-----EDELKHGYNEIEGWYPLFK--PTDKLTIQP--------GGLINDKSIGSGGA 105 ++ +GY E +K TD + +QP G + G+ + Sbjct: 55 NNGFSDVLGNKKSNGYKET-TLGAAWKVELTDNVWVQPQIGYTMPSGNFSATATSGAEPS 113 Query: 106 VY------------------LDVNYKFVPWFNLTVRNRYNHNNYS---STDLSGELDN-- 142 + L Y F + R RY+ + S + + DN Sbjct: 114 PFESTEYRASGDKGNTLKIGLKGGYDFDNGMYVAGRYRYDMREDNLKISAESGAKTDNVD 173 Query: 143 ----NDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHH-----------WEI 187 + + + +K + + + + + N H Sbjct: 174 IEGSANVHRTDLTFGYK-MEVVDLSMNWIHKDGEDKIDLKNATKHKSRAKSTRLDKVEAS 232 Query: 188 TNTFRYRIN----EHWLPYFELRWLDRNVEPYHRE---QNQIRIGTKYFF 230 + F ++ ++ PY + + + N ++G Y F Sbjct: 233 ADEFEFKATLLTADNLKPYVQYTVKNDINVKGGKNFAKDNVFKLGVNYSF 282 >UniRef50_A6VRQ2 Oligogalacturonate-specific porin n=4 Tax=Gammaproteobacteria RepID=A6VRQ2_MARMS Length = 247 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 86/250 (34%), Gaps = 28/250 (11%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASD----QGEVMLRVGYNFDMGAGIMLTNT 58 KI + +L LTS + A + R Y D + + + V + F G G + Sbjct: 4 KIVSAAVLIGLTSVAAHA-TTINIRHEYVPEYDGQDQENKDRIEVSHRFANGIGFGVEAK 62 Query: 59 YNF----QREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF 114 + DEL + Y +K +D LT+ P S G L + YK Sbjct: 63 WGSAKGAGPFDELSGNGQQTNISYR-YKISDTLTLTPQYKWESGSDKVGHQFNLSLGYKV 121 Query: 115 VPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSY--TFEPHYFMRV 172 +++ R+RY+++ + N+ +K + + + + + + Sbjct: 122 NDDWSVGFRHRYHYDKLA----DKAKQNSHYNRWTFSTGYKGIEDWGFGASVDYTFNQES 177 Query: 173 NDFNSSNGKDHHWEITNTFRYR-INEHWLPYFELR-----------WLDRNVEPYHREQN 220 + K E+ T Y+ W P+ E+ + V+ + Sbjct: 178 SGPRWKGDKSGFSEVNFTGEYKGFKSGWSPFAEVGMKPYKSGDTYSYKGAQVKSNDSWRP 237 Query: 221 QIRIGTKYFF 230 +IG KY + Sbjct: 238 VYKIGAKYSY 247 >UniRef50_D0KF32 Oligogalacturonate-specific porin n=5 Tax=Pectobacterium RepID=D0KF32_PECWW Length = 254 Score = 59.3 bits (142), Expect = 9e-08, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 3/139 (2%) Query: 92 GGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTY 151 G + +S G+ L + + +L + RY+ + + + D+ + Sbjct: 119 GDIGASQSSGARYTPGLKLTWAVTDKTDLHAQYRYDLRKITRSKRTSTDDDAHRHRYEAG 178 Query: 152 WNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRN 211 +K D F+ + + D+ N K H ++ Y IN++W + + + Sbjct: 179 VAYKGFDNFTLAY--TAYYYHADYVLQNNKKHDYQQDFDVSYTINDNWTAHVGVEDVASG 236 Query: 212 VEPYHREQNQIRIGTKYFF 230 + R + + ++G Y F Sbjct: 237 RDVKSR-EGKGKVGFTYTF 254 >UniRef50_B7VKI6 Putative uncharacterized protein n=17 Tax=Gammaproteobacteria RepID=B7VKI6_VIBSL Length = 237 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 73/255 (28%), Gaps = 43/255 (16%) Query: 1 MKKINAIILLSSLTSASVFAGAYVE---NREAYNLASDQGE--VMLRVGYNFDMGAG--- 52 MKKI A+ LS ++S FAG+ + + + L G+ FD G Sbjct: 1 MKKIIALSALSLAFASSAFAGSSYVTGNIQFHDDGRIHGSDMTSTLEAGHTFDNSLGGLT 60 Query: 53 -----------IMLTNTYNFQREDELKHGYNEIE--GWYPLFKPTDKLTIQPGGLINDKS 99 + T D N G F TD L + G + Sbjct: 61 VYTEFDGIQLGDLEGLTAAETGGDATTGQANAFITVGGEQAFNITDNLWVAAGYQHVFSA 120 Query: 100 IGS-GGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITD 158 S + + Y F +++ R R + D + Y + + + + Sbjct: 121 GESIQFRPLVKIGYNFDNGISISNRTR-------AHIDDTSADADTDYRMDNRIAYSVNE 173 Query: 159 KFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVE---PY 215 + ++ Y + + + PYFE R V+ Sbjct: 174 DLALSYNNVYMIDAEAMDHELRATWTRQ-----------GVQPYFEFRSQANGVDFANGA 222 Query: 216 HREQNQIRIGTKYFF 230 + N G Y F Sbjct: 223 SKTNNAFVFGASYGF 237 >UniRef50_D0XGT9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGT9_VIBHA Length = 247 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 17/166 (10%) Query: 79 PLFKPTDKLTIQPGGLINDK--SIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNN------ 130 FKP+D L + G + G+ L ++Y+ F L R Y++ N Sbjct: 85 KYFKPSDDLGLFAYGAYAQGGYADGNELRARLGLDYQATHEFGLHGRIGYDYGNSKMSVS 144 Query: 131 ---YSSTDLSGELDNNDTY--EIGTYWNFKITDKFSYTFEPHYFMRVND-FNSSNGKDHH 184 + + S E D ++ + ++++I ++F + N + H Sbjct: 145 HGDHEHSYHSSEHDTKRSHLGRMDVGFSYEIGHVAEFSFNYVVQKQFESALVEDNDTNLH 204 Query: 185 WEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 +E T+ + PY E R ++ + +H E++ I+ G + F Sbjct: 205 YEARLTYT---DLVLQPYVEYRQTNKAFDEHHFEESAIQFGASFSF 247 >UniRef50_C5BBJ1 Oligogalacturonate-specific porin KdgM n=7 Tax=Enterobacteriaceae RepID=C5BBJ1_EDWI9 Length = 59 Score = 44.3 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 170 MRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYF 229 M + +N K ++E YRIN + PY E+ + N R Q + R+G +Y Sbjct: 1 MYSDALKYNN-KKTNYEHNVALSYRINPSFTPYVEVGNVAVNSNSDAR-QTRYRVGLQYH 58 Query: 230 F 230 F Sbjct: 59 F 59 >UniRef50_C5D0H1 Conserved repeat domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D0H1_VARPS Length = 2434 Score = 43.2 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 50/176 (28%), Gaps = 14/176 (7%) Query: 63 REDELKHGYNEIEGWYPLFKPTDKLTI--------QPGGLINDKSIGSGGAVYLDVNYKF 114 + G FK TD+ ++ Q GG N + G+G A L + Sbjct: 2079 ADSIDGRAAQNAIGVRNTFKLTDRFSLTGGLEHTRQMGGYANSANNGTGYAAGLGESTAV 2138 Query: 115 VPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVND 174 V + S + D+ +T T + +KIT +S Sbjct: 2139 T----AGVEYLTDTYKLSGILEGRKGDDANTRLFSTGFGYKITPAWSLLARSVVSDSEGQ 2194 Query: 175 FNSSNGKDHHWEITNTFRYRI--NEHWLPYFELRWLDRNVEPYHREQNQIRIGTKY 228 S + H YR ++ W + + + G+ + Sbjct: 2195 GASGGNERHLQRHQIGLAYRPVDDDTWNALMRYERRSERIVGHGNAAGALTGGSAF 2250 >UniRef50_C9QGR6 Putative uncharacterized protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QGR6_VIBOR Length = 267 Score = 42.0 bits (97), Expect = 0.017, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 89/278 (32%), Gaps = 59/278 (21%) Query: 1 MKKI--NAIILLSSLTSASVFAGAYVENREAYNLASDQG---EVMLRVGYNFDMGAGIML 55 MKK+ + +L + S +G V+ A D+ + VGY+F+ G + Sbjct: 1 MKKLAVSTAVLAAMAASPVFASGLSVDVYGDRAFAGDKKGNSTQGVEVGYDFENGLSLSA 60 Query: 56 TNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQP--GGLINDKSIGSGGAVYLDVNYK 113 T N + ++ + F+ T+ + +QP G ++ND +D Y+ Sbjct: 61 EATTNKDLD---------LDAAWK-FQLTESVYLQPSVGYVLNDSKTYRAEDPNVDGGYE 110 Query: 114 F--------------------VPWFNLTVRNRY--NHNNYSSTDLSGELD---------- 141 F F T+R RY N + + T +G D Sbjct: 111 FLELKGTNSDVAKAGLEFGYDNSQFFYTLRGRYEANTSKLALTHETGGYDAKGNPVNVER 170 Query: 142 -----NNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNS----SNGKDHHWEITNTFR 192 ++ + ++ F D N + W Sbjct: 171 HSIGARSEIARFDSLIGYRFDYVTLTAKGIRKFELNKDIKRLNREMNTDNDRWSGEFKAT 230 Query: 193 YRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + PY E D+ + ++ I+IGTK+ F Sbjct: 231 VTAWDGVAPYVEYTH-DKAFTQHGKDDQIIKIGTKFTF 267 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q8X8F2 Porin ompL n=44 Tax=Enterobacteriaceae RepID=OMP... 218 9e-56 UniRef50_Q9L7R3 Porin ompL n=35 Tax=Enterobacteriaceae RepID=OMP... 213 3e-54 UniRef50_A4WE32 Oligogalacturonate-specific porin n=9 Tax=Entero... 191 1e-47 UniRef50_UPI0001C33DB2 oligogalacturonate-specific porin protein... 191 2e-47 UniRef50_P69857 Probable N-acetylneuraminic acid outer membrane ... 187 3e-46 UniRef50_A8AGB9 Putative uncharacterized protein n=1 Tax=Citroba... 186 4e-46 UniRef50_Q934G3 Oligogalacturonate-specific porin kdgM n=40 Tax=... 177 2e-43 UniRef50_B5Y2Y8 Oligogalacturonate-specific porin protein (KdgM)... 177 3e-43 UniRef50_B4TSP1 Oligogalacturonate-specific porin n=25 Tax=Salmo... 172 6e-42 UniRef50_A5W1L4 Oligogalacturonate-specific porin n=5 Tax=Pseudo... 170 3e-41 UniRef50_Q9RGQ2 Alginate lyase AlyVGIII n=1 Tax=Vibrio haliotico... 169 6e-41 UniRef50_D0ZBP0 Putative uncharacterized protein n=2 Tax=Edwards... 169 8e-41 UniRef50_A7MI99 Putative uncharacterized protein n=1 Tax=Cronoba... 167 3e-40 UniRef50_UPI00018269B6 hypothetical protein EcanA3_20802 n=1 Tax... 165 1e-39 UniRef50_D0Z3T4 N-acetylneuraminic acid outer membrane channel p... 164 3e-39 UniRef50_A5KUM1 Putative outer membrane protein n=1 Tax=Vibriona... 163 4e-39 UniRef50_A8AJA0 Putative uncharacterized protein n=3 Tax=Enterob... 162 6e-39 UniRef50_C6DG01 Oligogalacturonate-specific porin n=39 Tax=Enter... 160 2e-38 UniRef50_Q7MCI9 Putative outer membrane protein n=4 Tax=Gammapro... 160 3e-38 UniRef50_P0A1U9 Uncharacterized protein yiiY n=38 Tax=Enterobact... 157 2e-37 UniRef50_UPI000197C7F9 hypothetical protein PretD1_05772 n=1 Tax... 157 3e-37 UniRef50_B3HTB9 Oligogalacturonate-specific porin protein n=1 Ta... 156 7e-37 UniRef50_D0X8V1 Putative uncharacterized protein n=1 Tax=Vibrio ... 154 2e-36 UniRef50_B7VN43 Putative uncharacterized protein n=6 Tax=Vibrion... 150 5e-35 UniRef50_D0X276 Putative uncharacterized protein n=1 Tax=Vibrio ... 148 2e-34 UniRef50_A6VRQ2 Oligogalacturonate-specific porin n=4 Tax=Gammap... 147 2e-34 UniRef50_D0KF31 Oligogalacturonate-specific porin n=5 Tax=Pectob... 145 9e-34 UniRef50_A6B1X6 Oligogalacturonate-specific porin protein (KdgM)... 144 2e-33 UniRef50_A6CXP1 Putative outer membrane protein n=1 Tax=Vibrio s... 139 5e-32 UniRef50_A3UR43 Putative oligogalacturonate specific porin n=1 T... 128 2e-28 UniRef50_D0KF32 Oligogalacturonate-specific porin n=5 Tax=Pectob... 120 3e-26 UniRef50_Q1Z3D7 Putative uncharacterized protein n=1 Tax=Photoba... 117 3e-25 UniRef50_B7VKI6 Putative uncharacterized protein n=17 Tax=Gammap... 115 2e-24 UniRef50_D0XGT9 Putative uncharacterized protein n=1 Tax=Vibrio ... 89 1e-16 Sequences not found previously or not previously below threshold: UniRef50_Q6LL41 Putative uncharacterized protein n=1 Tax=Photoba... 79 1e-13 UniRef50_A6D8B8 Putative uncharacterized protein n=1 Tax=Vibrio ... 61 3e-08 UniRef50_C5BBJ1 Oligogalacturonate-specific porin KdgM n=7 Tax=E... 58 3e-07 UniRef50_C9QGR6 Putative uncharacterized protein n=1 Tax=Vibrio ... 55 2e-06 UniRef50_A6CVK5 Putative uncharacterized protein n=1 Tax=Vibrio ... 53 8e-06 UniRef50_A6FJR0 Putative uncharacterized protein (Fragment) n=1 ... 52 1e-05 UniRef50_C5D0H1 Conserved repeat domain protein n=1 Tax=Variovor... 46 8e-04 UniRef50_A6D6T6 Putative uncharacterized protein n=1 Tax=Vibrio ... 45 0.002 UniRef50_D2RKT4 OmpA/MotB domain protein n=2 Tax=Acidaminococcus... 43 0.010 UniRef50_UPI000175872E PREDICTED: hypothetical protein n=1 Tax=T... 43 0.010 UniRef50_D1AH59 Putative uncharacterized protein n=3 Tax=Sebalde... 42 0.013 UniRef50_B2T7F2 Putative uncharacterized protein n=3 Tax=Burkhol... 42 0.014 UniRef50_P55448 Putative outer membrane protein y4fJ n=6 Tax=Rhi... 42 0.023 UniRef50_B8LAJ4 Putative uncharacterized protein n=1 Tax=Stenotr... 41 0.025 UniRef50_UPI0001BC636B membrane protein involved in aromatic hyd... 40 0.048 UniRef50_Q3M8B4 Cna B-type n=1 Tax=Anabaena variabilis ATCC 2941... 40 0.059 UniRef50_Q48391 CymA protein n=9 Tax=Gammaproteobacteria RepID=Q... 40 0.079 UniRef50_Q5E089 Outer membrane protein U paralog, OmpU2 n=6 Tax=... 40 0.089 UniRef50_D1AFP4 Putative uncharacterized protein n=1 Tax=Sebalde... 40 0.090 UniRef50_C6X4B1 Putative uncharacterized protein n=2 Tax=Flavoba... 39 0.094 >UniRef50_Q8X8F2 Porin ompL n=44 Tax=Enterobacteriaceae RepID=OMPL_ECO57 Length = 230 Score = 218 bits (556), Expect = 9e-56, Method: Composition-based stats. Identities = 214/230 (93%), Positives = 219/230 (95%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK INAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTY Sbjct: 1 MKNINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF PWFNL Sbjct: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNL 120 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 TVRNR+NHNNYSSTDL+G+LDNND+YEIG YWNF ITDKFSYTFEPHYF +NDFNS NG Sbjct: 121 TVRNRFNHNNYSSTDLNGDLDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNINDFNSGNG 180 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 HHWEITNTFRYRINEHWLPY ELRWLDRNVEPYHREQNQIRIGTKYFF Sbjct: 181 TKHHWEITNTFRYRINEHWLPYIELRWLDRNVEPYHREQNQIRIGTKYFF 230 >UniRef50_Q9L7R3 Porin ompL n=35 Tax=Enterobacteriaceae RepID=OMPL_SALTY Length = 230 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 203/230 (88%), Positives = 212/230 (92%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK +N +++L+S+ S SVFAGAYVENREAYNLASDQ E MLRVGYN DMGAGIMLTNTY Sbjct: 1 MKSLNTLVILTSVISTSVFAGAYVENREAYNLASDQMEFMLRVGYNSDMGAGIMLTNTYT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 QR+DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF PWFNL Sbjct: 61 LQRDDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFTPWFNL 120 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 TVRNRYNHNNYSSTDL+GELDNND+YEIG YWNF ITDKFSYTFEPHYF VNDFNSSNG Sbjct: 121 TVRNRYNHNNYSSTDLNGELDNNDSYEIGNYWNFIITDKFSYTFEPHYFYNVNDFNSSNG 180 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 HHWEITNTFRYRINEHWLPYFELRWLDRNV PYHREQNQIRIG KYFF Sbjct: 181 TKHHWEITNTFRYRINEHWLPYFELRWLDRNVGPYHREQNQIRIGAKYFF 230 >UniRef50_A4WE32 Oligogalacturonate-specific porin n=9 Tax=Enterobacteriaceae RepID=A4WE32_ENT38 Length = 228 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 14/234 (5%) Query: 4 INAIILLSSLTSASVFAGA-YVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQ 62 + ++L+SL AS A A V+ R Y + S + V + F G G + + Sbjct: 2 LKKSLVLASLVGASFAAQAVTVDLRHEY-IDSGSNADRVAVSHRFANGFGFSVEAKWKSG 60 Query: 63 RE------DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVP 116 + ++ +E + + +K TD +++ PG + + +L Y F Sbjct: 61 GDKADRPFSDMVGNGHEDQISWR-WKATDNISLTPGFTLESNDSRTIYKPFLHAQYSFDN 119 Query: 117 WFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFN 176 F + R RY++ Y S S E D++ + + F Y Sbjct: 120 GFYVAARYRYDYTRYPS---SAEKDDDKVNRGDAWLG-WVMGDFRTELNYVYAKSSEGTI 175 Query: 177 SSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 SN KD+ E Y+I+++W PY E+ ++ + R Q + R+G Y F Sbjct: 176 RSNNKDYSEEYNAKLAYKIDKNWSPYVEVGNVNGSKTTDER-QTRFRLGVAYSF 228 >UniRef50_UPI0001C33DB2 oligogalacturonate-specific porin protein (KdgM) n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33DB2 Length = 232 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 8/233 (3%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT--NTYN 60 K A++L T + A + + R Y AS E ++ +F G + + N Sbjct: 2 KRTALVLAVCCTPLASHAMTF-DMRGGYKEASHTYESRFKMSQSFQSGYWLSMETDNKQG 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 D+ YNEIEG Y +K L IQPG + + S G+ Y+ + Sbjct: 61 NDNYDQSTTDYNEIEGNYK-YKLNPALAIQPGMVYHWSSAGTQIRPYVKFIWNMTDSVYS 119 Query: 121 TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG 180 +R RY+ N Y S DLSG +D + Y+ ++ +K++ P ++ VNDF+ +NG Sbjct: 120 GIRFRYDWNQYDSVDLSGNMDKGSVERVDLYFGWQ-NEKWNIQDNPVFYRYVNDFHYNNG 178 Query: 181 KDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHR---EQNQIRIGTKYFF 230 K +E +Y++N+ W PY E ++++ + +N+ R+G F Sbjct: 179 KKSSYENDLVIKYKLNKTWQPYVEWDYMEQQGKYDGESGLTENRFRVGLTINF 231 >UniRef50_P69857 Probable N-acetylneuraminic acid outer membrane channel protein nanC n=57 Tax=Bacteria RepID=NANC_ECO57 Length = 238 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 8/233 (3%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT-NTYNF 61 KI + +LL +S + A ++ R Y S E L+V + G + NT+N Sbjct: 5 KILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNT 64 Query: 62 QREDELKHGY---NEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWF 118 +++ ++ ++E Y + K D+ T++PG L + S G+ Y+ +++ Sbjct: 65 IHDNKKENAALNDVQVEVNYAI-KLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDL 123 Query: 119 NLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSS 178 N +R RY+ Y DLSG++ ++ + Y + I F++ ++ + + ND+ + Sbjct: 124 NFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYA 183 Query: 179 NGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE---QNQIRIGTKY 228 N K E +Y + PY E +LDR R+ +N RIG + Sbjct: 184 NHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSF 236 >UniRef50_A8AGB9 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AGB9_CITK8 Length = 265 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 7/234 (2%) Query: 2 KKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNF 61 KK + + + R YN+ + E +V ++ G + N Sbjct: 32 KKCLFTGAVIFFSFTPFVHAVQFDVRGGYNIENHSYESRFKVSNSWSSGWWASMETDSNN 91 Query: 62 QR--EDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFN 119 D++ YNE+E Y + D+ + PGG+I+ + G+ Y+ +NYK F+ Sbjct: 92 GSPSLDDMTSSYNEMETNYT-WHINDRFALVPGGVIHWSNSGTQLRPYIRLNYKISERFS 150 Query: 120 LTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVN-DFNSS 178 +R R +H+NY D +G+ +++ + I + +KI +++ ++ +M + D + Sbjct: 151 SGIRYRLDHHNYDVVDNTGDTIHDNEHRIDLFLGYKINQDWNFMWQGTAYMHQDPDLEYN 210 Query: 179 NGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEP---YHREQNQIRIGTKYF 229 NGK E T +YR NE++ PYFE +LD + ++IR+G + Sbjct: 211 NGKRWATENAFTIKYRWNEYFSPYFEYDYLDEQSNYKGEKGKPDSRIRVGVTFN 264 >UniRef50_Q934G3 Oligogalacturonate-specific porin kdgM n=40 Tax=Enterobacteriaceae RepID=KDGM_DICD3 Length = 236 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 90/239 (37%), Gaps = 12/239 (5%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREA-YNLASDQGEVMLRVGYNFDMGAGIMLTNTY 59 MK + ++SL S + A ++ R + A + L + + F G G+ + Sbjct: 1 MKIKLLTLAVASLVSVNALA-VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKW 59 Query: 60 NFQREDELKHG-YNEIEGWYP------LFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNY 112 D+ + +NE ++K +I+PG + S + YL Sbjct: 60 AQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGFSLESGSSNNNYRPYLRGRA 119 Query: 113 KFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRV 172 ++ +R R + +S ++ + + Y + ++ ++ +E Y Sbjct: 120 NVTDDLSVALRYR-PYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGT 178 Query: 173 ND-FNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + S+ D+ Y+ +++W PY E+ + + R Q + R+G +Y F Sbjct: 179 SGKTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDER-QTRYRVGVQYSF 236 >UniRef50_B5Y2Y8 Oligogalacturonate-specific porin protein (KdgM) n=2 Tax=Klebsiella RepID=B5Y2Y8_KLEP3 Length = 250 Score = 177 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 22/250 (8%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 M+ A I+ L + + R Y S E +V ++ G + Sbjct: 1 MRTKTAFIMCCVLGIPAAGHALTFDVRGGYRAGSHSYESRYKVSQGWETGWWASMEMDNK 60 Query: 61 FQRED-----------------ELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSG 103 + + + YNEIE Y + DK +QPGG+ + S G+ Sbjct: 61 NNKNNHQGNQGTDRADGSHSFGDSTVDYNEIEANYS-WPFADKWALQPGGIYHWSSKGTQ 119 Query: 104 GAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYT 163 YL VNYK P +R RY++N Y + + +GE + + Y +K ++S Sbjct: 120 LRPYLRVNYKATPDLTFGLRYRYDYNTYETVNSAGESHRDSVNRLDLYVAYKFNAQWSAL 179 Query: 164 FEPHYFMR-VNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE---Q 219 ++ + +D+ N K E T RY+ N+ + PY E +L + + + Sbjct: 180 YQGTVYRHVNDDYKYKNDKSSATENALTLRYKWNDWFSPYIEYDYLGKQGYHDGQNKISE 239 Query: 220 NQIRIGTKYF 229 ++ RIG + Sbjct: 240 SRYRIGMTFT 249 >UniRef50_B4TSP1 Oligogalacturonate-specific porin n=25 Tax=Salmonella enterica RepID=B4TSP1_SALSV Length = 230 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 86/239 (35%), Gaps = 18/239 (7%) Query: 1 MKKINAIILLSSLT-SASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTY 59 MK ++ + S +S A ++ R Y + + + + G G + + Sbjct: 1 MKINRYLLGMVSFIEFSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASV 60 Query: 60 NFQRED--------ELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVN 111 D +L E+ Y +K TD +QPG + S YL Sbjct: 61 KSGGVDGEQDKHLSDLVANAIELGVSYN-YKVTDHFVLQPGFIFESGPDTSIYKPYLRGQ 119 Query: 112 YKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMR 171 Y F + R RY++ ++ D+ T TY + + E ++ Sbjct: 120 YNFDSGVYMAGRYRYDYARKTANYN----DDEKTNRFDTYIGYVFDE---LKLEYNFTWM 172 Query: 172 VNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 +D + K ++E +++N+ + PY E+ + R Q + R+G +Y F Sbjct: 173 DSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDER-QTRYRVGLQYHF 230 >UniRef50_A5W1L4 Oligogalacturonate-specific porin n=5 Tax=Pseudomonas RepID=A5W1L4_PSEP1 Length = 241 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 91/244 (37%), Gaps = 18/244 (7%) Query: 1 MKKINAIILLSSLTSASVFA---GAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTN 57 M ++ +S S +A A + R + +++ Y D G G Sbjct: 1 MNITLRRLIAASTLGLSFYACADSASINYRHTFTEDDSIHSDRIKLSYRKDSGLGFAAEI 60 Query: 58 TYNFQRE------DELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVN 111 Y + D + + +E Y +K + + T P ++ + L N Sbjct: 61 KYKTAGDREDVAYDNMVNNGHEFTVDYN-YKMSPRSTWTPAFQMDSTKDATTYKFGLKYN 119 Query: 112 YKFVPWFNLTVRNRYNHNNY-----SSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEP 166 YK + + R R++ N + DN +T + + + + +++ ++ Sbjct: 120 YKLSDTWYVATRVRHDARNLDRDQIDHSKPDRAKDNQNTTRLEGWLGYTPSGPWAFEYQY 179 Query: 167 HYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGT 226 +F D+ + K +E +Y++N+ W P+ E+ + N R Q + R+G Sbjct: 180 IHF--TTDYIRYDNKKRDYEQNLIIKYKLNKQWAPFMEVGDIKVNSYTDDR-QARWRLGI 236 Query: 227 KYFF 230 +Y F Sbjct: 237 QYNF 240 >UniRef50_Q9RGQ2 Alginate lyase AlyVGIII n=1 Tax=Vibrio halioticoli RepID=Q9RGQ2_9VIBR Length = 235 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 77/236 (32%), Gaps = 8/236 (3%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 +KK + + + A A V+ R+ Y ++VG + L Sbjct: 2 IKKHQITLFIVATVVAVSANAASVDYRQEYKHNDKSYASRVKVGSSVGHHF-FSLEAKQT 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNL 120 + + + NE Y FK K I P I + + V YKF Sbjct: 61 GKPISDWQAADNEFVYGYN-FKVNKKWRITPSMPITFGNDRVTYKPQVRVQYKFDSGLTS 119 Query: 121 TVRNRYNHNNYSSTDLSGEL-DNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSN 179 +R R+ NY+ + D + Y + F + +F F + Sbjct: 120 KLRYRHEFRNYTGDKSDKDSIDRSKITGNLDYKVGALQLGFEANYAEDFFHDNEWFGGKS 179 Query: 180 GKDHH-WEITNTFRYRINEH-WLPYFELRWL---DRNVEPYHREQNQIRIGTKYFF 230 K H+ W+ Y+ + W PY EL + + Q + R+G Y F Sbjct: 180 AKRHNEWDYNVKIGYKETDWDWRPYIELGNVQYSNGPSVTNSNRQLRTRVGLTYSF 235 >UniRef50_D0ZBP0 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=D0ZBP0_EDWTE Length = 236 Score = 169 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 10/238 (4%) Query: 1 MKKINAIILLSSLTSAS-VFAG---AYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT 56 M K+ + L L SAS +A VE R Y + +V + G Sbjct: 1 MNKLIYLAALPCLFSASPSWANNYKTSVEYRHEYREGVKKHSDRFKVFLDTGNHIGFEFD 60 Query: 57 NTYNFQREDELKHGY-NEIEGWYPLF-KPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKF 114 Y + Y N E + + G + S G ++ +NY F Sbjct: 61 ARYGNHDDKAYDQMYLNGSELNVFYYTDLNKNTLLLAGNSFDFTSEGLVFIPFVRLNYTF 120 Query: 115 VPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMR--V 172 F + R ++ +YS + + ++ E T+ +K ++++ ++ Sbjct: 121 DNGFYINGRYKWKLWDYSMKGVDQQPYHSKIQEFDTFIGYKW-GQWNFQYQLDLMREMSA 179 Query: 173 NDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 N NGK + Y I+ +W P+ E+ + + + R Q + RIG KY + Sbjct: 180 NGQPLYNGKKWDYANNFRVVYAIDANWRPFIEIGDIKESRDSD-RRQGRYRIGLKYTW 236 >UniRef50_A7MI99 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MI99_ENTS8 Length = 247 Score = 167 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 22/245 (8%) Query: 2 KKINAIILLSSLTSASVFAGAY-VENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTY- 59 + + + + S S +AG V+ R A+N+ +D E ++ + G T Sbjct: 3 NLLKVCLCIPVIYSVSGWAGTTWVDVRGAHNIRADTNETRIKFMHQATNGFYFSAEATQS 62 Query: 60 -----------NFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYL 108 +ED + EIE + F + +I PG + ++ Sbjct: 63 HNESFFGDEDSRDGKEDGVTGVSQEIETRWQ-FPLGNGYSIAPGLTTVFTKTNTHYRPFI 121 Query: 109 DVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELD---NNDTYEIGTYWNFKITDKFSYTFE 165 F NL R RYN N + +D + D +++ + + I +F ++ Sbjct: 122 QGWKAFDNGINLAARYRYNTVNDAHSDRKLDSDEYTRRKSHQFDIWIAYNI-GRFGMSWN 180 Query: 166 PHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPY---HREQNQI 222 P + + + + G+D +WE T F Y++++ W PY EL LD+ H+ + Sbjct: 181 PRFRYQ-DGVDQGTGRDTYWEHTLAFSYKMDDDWTPYIELGSLDKTYVDDHGTHKNEFVG 239 Query: 223 RIGTK 227 R+G Sbjct: 240 RLGIT 244 >UniRef50_UPI00018269B6 hypothetical protein EcanA3_20802 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI00018269B6 Length = 248 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 22/243 (9%) Query: 3 KINAIILLSSLTSASVFAG-AYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN- 60 I A + + L S + G V+ R +N SD + ++V + D G + N Sbjct: 5 IIKASCISALLISTQGWCGNTAVDLRFGHNTRSDVNDSRIKVMHQADNGFYFSVEAAQNH 64 Query: 61 -----------FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLD 109 + L EIE + F + L + PG + + + ++ Sbjct: 65 NDTFFGDTDRYNADDKGLTEAAQEIETRWR-FDLGNGLAVAPGMVTVFTASNTHYRPFIQ 123 Query: 110 VNYKFVPWFNLTVRNRYNHNNYSSTDLSGE---LDNNDTYEIGTYWNFKITDKFSYTFEP 166 F NL+ R RYN N + +D + ++++ ++ + I KF ++ P Sbjct: 124 GWKAFDNGLNLSTRYRYNTVNDAHSDKQLDGSGYTRRESHQFDIWFAYNI-GKFGMSYNP 182 Query: 167 HYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDR---NVEPYHREQNQIR 223 + + N + G D +WE T F Y++++ W PY EL LD+ + + H+ +R Sbjct: 183 RFRWQDN-VDQGTGDDTYWEHTVAFNYKLDDGWTPYVELVSLDKTYIDDDGNHKNDYAVR 241 Query: 224 IGT 226 +G Sbjct: 242 LGI 244 >UniRef50_D0Z3T4 N-acetylneuraminic acid outer membrane channel protein NanC n=7 Tax=Gammaproteobacteria RepID=D0Z3T4_LISDA Length = 242 Score = 164 bits (414), Expect = 3e-39, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 92/243 (37%), Gaps = 14/243 (5%) Query: 1 MKKINAIILLSSLTSASVFA-----GAYVENREAYNLASDQGEVMLRVGYNFDMGAGIML 55 M + +++ S+L +A A +E R Y +++ ++ + G G L Sbjct: 1 MNTLTKVVIASTLVTAGGQALANDYKTTIEYRHQYVDGANKHSDRIKAFLDTGKGVGFEL 60 Query: 56 TNTYNFQREDELKHGYNEIEGWYPLF---KPTDKLTIQPGGLINDKSIGSGGAVYLDVNY 112 YN +D++ + + F + G ++ G Y+ +NY Sbjct: 61 DARYNNDEKDKMFDSMSMNGSEFSAFYYKRLNPNTVGLVGMSLDFVPDGLVYVPYVRLNY 120 Query: 113 KFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKI-TDKFSYTFEPHYFMR 171 KF + R ++ +YS T SG+ ++ E + + F Y F+ M Sbjct: 121 KFDNNIRVQGRYKWKLWDYSMTGPSGDSYHSKIQEFDAWLGYNTQNWDFQYEFQIWKEME 180 Query: 172 VNDFNSSNGKDHHWEITNTFRY----RINEHWLPYFELRWLDRNVEPYHREQNQIRIGTK 227 N + D ++ Y + + W P+ E+ + ++ +R Q + R+G K Sbjct: 181 SNALPQFDNDDINYLHNFRLMYTYKTKDDTSWRPFIEIGNVSQSRYTDNR-QTRYRMGIK 239 Query: 228 YFF 230 Y + Sbjct: 240 YTW 242 >UniRef50_A5KUM1 Putative outer membrane protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KUM1_9GAMM Length = 231 Score = 163 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 4/214 (1%) Query: 20 AGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIM-LTNTYNFQREDELKHGYNEIEGWY 78 AG YV+ R Y +DQ VG++FD G G+ LTN + + N Y Sbjct: 19 AGGYVDLRAEYRSTTDQYRSRFIVGHHFDNGYGLETLTNVRHAAGAYDETKVINTEFTHY 78 Query: 79 PLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSG 138 + D + PG ++N + + YL +NY F + R RY+ + + + G Sbjct: 79 YTYAINDNFMLNPGVVMNFQGSNTFLMPYLKLNYNFDNGLFVHGRYRYDFSTEALVNDYG 138 Query: 139 ELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMR--VNDFNSSNGKDHHWEITNTFRYRIN 196 + + + TDK+ ++ YF + + + G H E T Y+ Sbjct: 139 NEETAKRNRYDIWTGYN-TDKYMISYAFTYFDQITHHTTELATGDLHAREHTVKAVYKWK 197 Query: 197 EHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 PY E+ D + + R+G + F Sbjct: 198 PTVRPYAEVVDADTVQSENDKTDWRFRVGVNFSF 231 >UniRef50_A8AJA0 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A8AJA0_CITK8 Length = 263 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 10/221 (4%) Query: 19 FAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQREDEL-------KHGY 71 F Y R Y AS++ L + I ++F+ + +L K Y Sbjct: 41 FTTVYFAPRTQYRTASERFLQRLMLTGVVQDPNSIFARMYWSFETDSDLGKNMEQWKSSY 100 Query: 72 NEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNY 131 E E P ++PG + + +S GS YL + Y F P +R RYNH N+ Sbjct: 101 EEAEFNKPFPLGESDFWLEPGVVFHWESAGSRIDPYLGIGYHFDPTLGAVLRYRYNHQNH 160 Query: 132 SSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVND--FNSSNGKDHHWEITN 189 S L G+ D++ + + Y T F + P Y+ + + F +NGK+H + Sbjct: 161 DSQTLQGDWDDSSEHRVDIYLTKYFTPDFWVQYNPTYYSKTHGDKFEYANGKNHTLQHNF 220 Query: 190 TFRYRINEHWLPYFELRWLDRNVEPYH-REQNQIRIGTKYF 229 F + + P+FEL +LD + + + QIR+G KY Sbjct: 221 VFNFHATPRFYPFFELGYLDEYKDGDDTKNEYQIRVGFKYN 261 >UniRef50_C6DG01 Oligogalacturonate-specific porin n=39 Tax=Enterobacteriaceae RepID=C6DG01_PECCP Length = 242 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 86/244 (35%), Gaps = 16/244 (6%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREA-YNLASDQGEVMLRVGYNFDMGAGIMLTNTY 59 MK + ++SL S + A ++ R + + + L + + F G G+ + Sbjct: 1 MKFKLLALAVTSLISVNAMA-VTIDYRHEMQDTVKNDHKDRLSMSHRFANGFGLSAEAKW 59 Query: 60 NFQREDELKHG-YNEIEGWYP------LFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNY 112 D + +NE ++ +++PG ++ S + YL Sbjct: 60 KQSGSDNTPNKPFNEPVSNGTEVVASYVYNFNKTFSLEPGFSLDSSSDSNNYRPYLRGKI 119 Query: 113 KFVPWFNLTVRNRYNH---NNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYF 169 + ++R R + N ++ Y + ++K + +E Y Sbjct: 120 NITDDLSTSLRYRPYYLRKNANTTKTGPANYTKETGYNLTAVVSYKFLKDYQIDYELDYK 179 Query: 170 MRVNDFN---SSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGT 226 ++ ++ E Y+++++W PY + + + R Q + R+G Sbjct: 180 KANKAGPSGFQADKENWKIEHDVKLAYKLDKNWKPYMAIGNVVGDKNTDER-QTRYRVGV 238 Query: 227 KYFF 230 +Y F Sbjct: 239 QYSF 242 >UniRef50_Q7MCI9 Putative outer membrane protein n=4 Tax=Gammaproteobacteria RepID=Q7MCI9_VIBVY Length = 247 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 91/246 (36%), Gaps = 23/246 (9%) Query: 1 MK-KINAIILLSSLTSASVFAG-AYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT-- 56 MK K L ++T+ FAG ++ R +N ASD + ++ + FD G Sbjct: 1 MKIKALLCSTLVAVTALPTFAGETKLDVRFGHNTASDIRDSRVKFMHTFDTGFYFSAEAA 60 Query: 57 ----------NTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAV 106 N N ++ LK E E Y F + PG ++ + Sbjct: 61 QIHNDGYFAGNDSNDPDKNGLKAAAQEFEATYK-FDLGEDWYWAPGLVMVTAPNWTEYRP 119 Query: 107 YLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGE---LDNNDTYEIGTYWNFKITDKFSYT 163 YL + F +LT R RYN +N + + + + + + K Sbjct: 120 YLKLGTTFDNGVSLTGRYRYNWSNDENGKNYLDGSGTTRGASNQFDLWIS-KNFGDVGLM 178 Query: 164 FEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVE---PYHREQN 220 + P Y + + + G+D +WE T Y++NE W PY EL +D Sbjct: 179 YNPRYRYQ-DGVDQGTGRDDYWEHTIMVNYKLNETWTPYMELVSVDETYVDEQGNRENDY 237 Query: 221 QIRIGT 226 +R+G Sbjct: 238 AVRLGF 243 >UniRef50_P0A1U9 Uncharacterized protein yiiY n=38 Tax=Enterobacteriaceae RepID=YIIY_SALTI Length = 227 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 17/233 (7%) Query: 4 INAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQR 63 ++ LL L + A YV+ R Y S + + F G G + Sbjct: 6 RKSLFLLLPLVVTNAHA-VYVDVRHEYLDDSKANYDRAYISHRFANGVGFAIEAISKSGG 64 Query: 64 EDELKHGYNEIEGWYPLFKP-----TDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWF 118 +D K +N++E + T + QPG ++ + S Y + + Sbjct: 65 DDTNK-AFNDLETQGNEYTISYQFKTGDVAWQPGFVLETGNGYSTYKPYFRATWTLNESW 123 Query: 119 NLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITD-KFSYTFEPHYFMRVNDFNS 177 + R R+ + SS D++ + + +K + ++ + + + ++ Sbjct: 124 WVGARYRFEYVRRSSDIR----DDDTINRMDVWAGYKWNNFDWTIE---GIYKKADKYDL 176 Query: 178 SNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 +G ++E Y I+ W P+ E+ + N R Q + R+G Y F Sbjct: 177 YDGGKDNYEYNFRTAYIID-QWSPFVEVGNVSVNSNSDER-QTRFRVGIGYTF 227 >UniRef50_UPI000197C7F9 hypothetical protein PretD1_05772 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C7F9 Length = 235 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 94/241 (39%), Gaps = 17/241 (7%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MK + I +A+ Y++ R + + E +++G++ G L + Sbjct: 1 MKNLALGISTLLFCTAA--NATYIDYRHEWLGDEHRHEDRVKIGHSMQNGTYFSLEGKWR 58 Query: 61 F---QREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPW 117 + L NE+E Y +K T + P ++ + + Y Sbjct: 59 SRDGGFGENLSSKGNEVEVGYK-YKATKDFVLTPSFALDSGDKDTAYKFSVKAAYNLTDD 117 Query: 118 FNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNS 177 FN+ R RY +Y +++ + DN ++ Y +K+ FS +++ Y + + + Sbjct: 118 FNIGTRLRYGVRHYDNSNKP-KKDNQHYWQSNFYLGYKL-QDFSLSYDFEYKFDTD-YPA 174 Query: 178 SNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE--------QNQIRIGTKYF 229 GK+ + + N+ W+PY EL ++ + Y + Q + R+G Y Sbjct: 175 YKGKEKDYAHNLNVSWVGNKTWVPYVELGYVSYDDGSYVKNGQTYRDAWQWRYRVGIAYN 234 Query: 230 F 230 F Sbjct: 235 F 235 >UniRef50_B3HTB9 Oligogalacturonate-specific porin protein n=1 Tax=Escherichia coli F11 RepID=B3HTB9_ECOLX Length = 231 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 13/233 (5%) Query: 9 LLSSLTSASVFAG---AYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRED 65 +LS L+ V A +++ R Y + + G F G G+M YN D Sbjct: 1 MLSCLSPTLVCAEQPHGFIDYRHEYLDDTRTHADRVEFGTFFSNGIGLMGELRYNTDEGD 60 Query: 66 ELKHGYNEIEGW-------YPLFKPTD-KLTIQPGGLINDKSIGSGGAVYLDVNYKFVPW 117 + K ++ Y D K ++P ++ S L Y F Sbjct: 61 KDKWDPSQFGNNGTGLSVVYRFKPLDDKKFWLEPMFWLDTTQYWSTYEYGLSAGYDFSKE 120 Query: 118 FNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNS 177 + ++ R RY+ + + D+ + + +++ K ++ ++ + N + + Sbjct: 121 WKVSGRFRYDMDKATDKSKGYGNDDRNNRRYDVWIDYR-PQKTNFQYQLNLVYYNNGYLT 179 Query: 178 SNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 N ++ + Y++ W+PY + + Q + R G Y F Sbjct: 180 WNDGHKNYTASFKVGYKMG-SWIPYMSIADYKGVDKTSSNRQIRWRWGLTYTF 231 >UniRef50_D0X8V1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X8V1_VIBHA Length = 238 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 14/239 (5%) Query: 2 KKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNF 61 KK A+ + ++L + S+ A A ++ RE Y S+Q +++G + + + Sbjct: 4 KKQIALAIATTLFAGSISA-ASLDFREEYKHDSEQWAGRIKIGGSTGNHY-YGVEMK-HT 60 Query: 62 QREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLT 121 EL+ G +E E Y FK + + I + V YKF Sbjct: 61 GNLSELQRGDSEFEYGY-HFKFDNNWRVTTSMPITFGDEAVTYKPQVRVQYKFDSGITTK 119 Query: 122 VRNRYNHNNYSSTDLSGELDNN-----DTYEIGTYWNFKIT-DKFSYTFEPHYFMRVNDF 175 +R R+ NY+S S LD + +I ++ +F + +++ Sbjct: 120 LRYRHEFRNYASGKTSTGLDGKQHDSLNASKITGNIDYNWNAWQFGFEANYKEDFFSDEW 179 Query: 176 NSSNGK-DHHWEITNTFRYRINEH-WLPYFELRWL--DRNVEPYHREQNQIRIGTKYFF 230 N + W+ Y+ W PY E + + + + Q + R+G Y F Sbjct: 180 KLGNRDGKYEWDYNFKLGYKEKGWDWRPYVEFGNVQCNSSCDDKTSRQLRSRVGVTYSF 238 >UniRef50_B7VN43 Putative uncharacterized protein n=6 Tax=Vibrionales RepID=B7VN43_VIBSL Length = 244 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 30/252 (11%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 M K +I ++S+ +A + A + R Y +DQ +++G + ++ Sbjct: 1 MNKTKIVIAVASVLAAGSVSAASFDMRHEYKSHTDQHATRVKLGDSIGN---FLVDIEAK 57 Query: 61 FQRED-----ELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFV 115 F+ ED +LK+ E+ Y D T+ G I + G + Y Sbjct: 58 FKGEDGEFMEDLKNNGWELGLNYRHV-LNDNWTMTYGMPIEGRESGVTYKPQVRATYSVD 116 Query: 116 --PWFNLTVRNRYNHNNYSSTD---------------LSGELDNNDTYEIGTYWNFKITD 158 +L+ R RY+ + + +N + + N+ + Sbjct: 117 SIDGLSLSARYRYDMRQNTKSIATDSDGKPILDNGYLTYQNDENQRRHRLTANINYS-ME 175 Query: 159 KFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE 218 + + FE +Y+ +D+N + D ++E+ + R I W PY E + + R Sbjct: 176 NWRFGFEGNYYK-ADDYNIYDNDDTNYELNASIR-HIMGQWAPYVEFGDVSTSSTKATR- 232 Query: 219 QNQIRIGTKYFF 230 + + R+G Y F Sbjct: 233 ELRSRVGLTYSF 244 >UniRef50_D0X276 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 40B RepID=D0X276_VIBAL Length = 278 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 95/259 (36%), Gaps = 31/259 (11%) Query: 1 MKKINAIILLSSLTS-ASVFAGAYVENREAYNLASDQGEVMLRVGYNFDM--------GA 51 MK + + L + T A + A ++ R Y S+ +++ + + G Sbjct: 22 MKAVTTMSLFVASTLMAGAVSAATLDYRAEYKHESETYAQRIKISGSSKINDQTKLNFGV 81 Query: 52 GIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSI--GSGGAVYLD 109 + N D+L G +E + W ++ + IQPG I + + Sbjct: 82 EQKFHSYDNSHFWDQLVAGDSEFD-WGVRYQINKQWFIQPGMPITFGDDDEKTTYKPQVR 140 Query: 110 VNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGT-----------------YW 152 V YK + +R R+ YS + L + + + + Sbjct: 141 VGYKSSFGLSTALRYRHEFQVYSDGAGNKTLTDGTSVSVAGKTVEQGKWTLTGSYDMRQF 200 Query: 153 NFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWL-DRN 211 + + D ++E +Y ++ S+ KD W+ Y++ + + PYFEL + ++ Sbjct: 201 DNEYLDNVKLSYEINYNKNYDEVRLSDWKDSEWDAGLIVGYQMGD-FRPYFELWNVKGKD 259 Query: 212 VEPYHREQNQIRIGTKYFF 230 Q + R+G KY F Sbjct: 260 GSTTDDRQLRTRLGLKYSF 278 >UniRef50_A6VRQ2 Oligogalacturonate-specific porin n=4 Tax=Gammaproteobacteria RepID=A6VRQ2_MARMS Length = 247 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 27/252 (10%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASD----QGEVMLRVGYNFDMGAGIMLT 56 MK + ++ + R Y D + + + V + F G G + Sbjct: 1 MKIKIVSAAVLIGLTSVAAHATTINIRHEYVPEYDGQDQENKDRIEVSHRFANGIGFGVE 60 Query: 57 NTYNF----QREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNY 112 + DEL + Y +K +D LT+ P S G L + Y Sbjct: 61 AKWGSAKGAGPFDELSGNGQQTNISYR-YKISDTLTLTPQYKWESGSDKVGHQFNLSLGY 119 Query: 113 KFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSY--TFEPHYFM 170 K +++ R+RY+++ + N+ +K + + + + + + Sbjct: 120 KVNDDWSVGFRHRYHYDKLA----DKAKQNSHYNRWTFSTGYKGIEDWGFGASVDYTFNQ 175 Query: 171 RVNDFNSSNGKDHHWEITNTFRYR-INEHWLPYFELR-----------WLDRNVEPYHRE 218 + K E+ T Y+ W P+ E+ + V+ Sbjct: 176 ESSGPRWKGDKSGFSEVNFTGEYKGFKSGWSPFAEVGMKPYKSGDTYSYKGAQVKSNDSW 235 Query: 219 QNQIRIGTKYFF 230 + +IG KY + Sbjct: 236 RPVYKIGAKYSY 247 >UniRef50_D0KF31 Oligogalacturonate-specific porin n=5 Tax=Pectobacterium RepID=D0KF31_PECWW Length = 352 Score = 145 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 84/273 (30%), Gaps = 44/273 (16%) Query: 1 MKKINAIILLSSLTSASVFAGAYVE------NREAYNLASDQGEVMLRVGYNFDMGAGIM 54 MK +L+ A A + + + + +++ + G Sbjct: 81 MKIYTRNLLIVCAGFAPFLTQAETDGKTTFQYEHNWKTEARRHADSIKLIHKKTSGWSYE 140 Query: 55 LTNTYNFQREDELKHGYNEIEGW------YPLFKPTDKLTIQPGGLINDKSIGSGGAVYL 108 + + + Y++++G FK + T+ P + + L Sbjct: 141 VKFSTSAGGTSNYDVAYDDMQGGSGGMVIGKDFKLSKAATLTPSFEFSIGNSTMMYQSGL 200 Query: 109 DVNYKFVPWFNLTVRNRYNHNNYSSTDLSGE----------------LDNNDTYEIGTYW 152 Y+ ++ R RY + S + + + + Sbjct: 201 KYGYRINSDWSTYGRYRYEYKKPSRSSRYSTISASDKYGHAGESYLSKSDTGRHRLDAGV 260 Query: 153 NFKITDKFSYTFEPHYFMRVN---------------DFNSSNGKDHHWEITNTFRYRINE 197 + DK + T+ +Y++ N ++ + +E +Y+ N+ Sbjct: 261 TYSGLDKINLTYVFNYYIGDNTTKSYKYSKGEFTEREYAIYDNGKTDYEHQFKVQYKFNK 320 Query: 198 HWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 PY E ++++ R Q +I++G Y F Sbjct: 321 QLTPYIEYDDINQSSTSSSR-QGKIKVGFNYVF 352 >UniRef50_A6B1X6 Oligogalacturonate-specific porin protein (KdgM) n=4 Tax=Vibrionaceae RepID=A6B1X6_VIBPA Length = 227 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 22/236 (9%) Query: 3 KINAIILLSSLTSASVFAGAYVENREAY--NLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 + +LL ++TS + A A V+ R Y + D+ + V + FD G + +N Sbjct: 6 RYLTSVLLLAMTS-GLAAAASVDIRHEYVPDRDGDEHRDRIYVSHRFDNQIGFSVEAKWN 64 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIG-SGGAVYLDVNYKFVPWFN 119 ++ + + +E Y +K TD ++ PG I+ G S L YK ++ Sbjct: 65 YKDG-HMGNAGHETGVSYR-WKATDNFSLTPGINIDASPSGASVFKYNLTGAYKINDEWD 122 Query: 120 LTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFN-SS 178 + R R+ + N D++ ++ Y N K ++ + ++ Sbjct: 123 VAARIRHGYKN---------TDDSRYNQLNLYANRKF--EWGKLGVEAEYKDIHGGEGGW 171 Query: 179 NGKDHHWEITNTFRY-RINEHWLPYFELRWLDRNVEPYHREQ---NQIRIGTKYFF 230 K H I Y ++ +P+F + + + + + R+G KY F Sbjct: 172 KDKGHDQLIDFKGEYTKLESGVIPFFAIAAITHKGDGSEFKDEYVPRFRVGLKYNF 227 >UniRef50_A6CXP1 Putative outer membrane protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CXP1_9VIBR Length = 237 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 18/223 (8%) Query: 20 AGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQRE----DELKHGYNEIE 75 + YV+ R AY + E +R G++F I L T + E E Sbjct: 21 SANYVDVRGAYKTEAKTYETRVRAGFDFAEDWQIHLEGTQAQGDKLFSNSGKSVAAFETE 80 Query: 76 GWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTD 135 Y + D T+ PG + + S YL Y F R RY +S+ Sbjct: 81 LNYN-WAINDNFTLTPGFVYWNGSDHMEYRPYLKATYAEGN-FYTAARYRY---QAASSS 135 Query: 136 LSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGK----DHHWEITNTF 191 + + NDT ++ + + + F+ + P Y + + + D WE T Sbjct: 136 TTPGVKTNDTNQVDLWVGYNLN-DFALEYNPAYINQKDGGAYTGNGTDKADTKWEHTFQV 194 Query: 192 RYRINEHWLPYFELRWLDRNV----EPYHREQNQIRIGTKYFF 230 +Y E W PY + + LD+ + +N+IR G + F Sbjct: 195 KYTGFESWAPYVDYQILDKTYANAQYTDFKTENRIRAGVTFNF 237 >UniRef50_A3UR43 Putative oligogalacturonate specific porin n=1 Tax=Vibrio splendidus 12B01 RepID=A3UR43_VIBSP Length = 286 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 85/284 (29%), Gaps = 59/284 (20%) Query: 4 INAIILLSSLTSASVFAGAYVENREAYNLASD-------------QGEVMLRVGYNFDMG 50 ++ A AGA ++ R Y A+D + + +++G +F + Sbjct: 5 TKIAAAVACTLLAGTAAGASLDYRYEYRAATDYTKTNGDTAHVDARHQHRVKLGESFKLS 64 Query: 51 AGI---------MLTNTYNFQREDELKHGYNEIEG-------------WYPLFKPTDKLT 88 + + + N +K + Sbjct: 65 DKWKHSTGLELKFHGDDSYYDEDSGSVKSANSQSFYDGNWYIYGMEIDNTATYKIDNNWY 124 Query: 89 IQPGGLI------------NDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDL 136 +Q G I + K V YK +R R+ + ++ + Sbjct: 125 LQMGMPIAWDWDEPNANDGDWKMKKVTFKPQFRVGYKADMGLTTAIRYRHEYADFRNHTQ 184 Query: 137 SGELDNNDTYEIGTYWNFKIT----------DKFSYTFEPHYFMRVNDFNSSNGKDHHWE 186 G+ D+ + + K+T K ++E +Y +++ N D W+ Sbjct: 185 FGDKDSETGERLESAQKSKVTLTGSYKIESLPKLGLSYEANYVKSLDNVLLYNSDDWEWD 244 Query: 187 ITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 Y+ W P+ E+ D + R + + R+G Y F Sbjct: 245 AGLKVNYKFG-SWKPFAEIWSSDISSSSKDR-EAKYRVGIAYSF 286 >UniRef50_D0KF32 Oligogalacturonate-specific porin n=5 Tax=Pectobacterium RepID=D0KF32_PECWW Length = 254 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 88/254 (34%), Gaps = 28/254 (11%) Query: 1 MKK--INAIILLSSLTSASVFAG-AYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLT- 56 MKK + A IL + + + S A + ++ + + + + D G + + Sbjct: 5 MKKRYLVAGILFAQIYAISASASDTKLSYEHSWGTMNRYHGDEIGMRHFMDNGLYVGVEL 64 Query: 57 ---NTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQP-----------------GGLIN 96 N D++ Y + T +LT+ P G + Sbjct: 65 NFYNKNKDLAIDDVVSNSYAFYTGY-AYSLTPELTLTPNLEARFYSGGTSGEGTVGDIGA 123 Query: 97 DKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKI 156 +S G+ L + + +L + RY+ + + + D+ + +K Sbjct: 124 SQSSGARYTPGLKLTWAVTDKTDLHAQYRYDLRKITRSKRTSTDDDAHRHRYEAGVAYKG 183 Query: 157 TDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYH 216 D F+ + + D+ N K H ++ Y IN++W + + + + Sbjct: 184 FDNFTLAY--TAYYYHADYVLQNNKKHDYQQDFDVSYTINDNWTAHVGVEDVASGRDVKS 241 Query: 217 REQNQIRIGTKYFF 230 R + + ++G Y F Sbjct: 242 R-EGKGKVGFTYTF 254 >UniRef50_Q1Z3D7 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z3D7_PHOPR Length = 282 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 86/290 (29%), Gaps = 68/290 (23%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MKK +I + + L+S + FAG + E + E ++VG++ + G + Y+ Sbjct: 1 MKKTLSIAVAALLSSTA-FAGTFAEV-----SQATDNETAVKVGHSLENGISFDIEGVYS 54 Query: 61 FQR-----EDELKHGYNEIEGWYPLFK--PTDKLTIQPGGLI------------------ 95 ++ +GY E +K TD + +QP Sbjct: 55 NNGFSDVLGNKKSNGYKETTLG-AAWKVELTDNVWVQPQIGYTMPSGNFSATATSGAEPS 113 Query: 96 --------NDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYS---STDLSGELDN-- 142 G+ + L Y F + R RY+ + S + + DN Sbjct: 114 PFESTEYRASGDKGNTLKIGLKGGYDFDNGMYVAGRYRYDMREDNLKISAESGAKTDNVD 173 Query: 143 ----NDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHW------------- 185 + + + +K + + + + + N H Sbjct: 174 IEGSANVHRTDLTFGYK-MEVVDLSMNWIHKDGEDKIDLKNATKHKSRAKSTRLDKVEAS 232 Query: 186 --EITNTFRYRINEHWLPYFELRWLDRNVEPYHRE---QNQIRIGTKYFF 230 E ++ PY + + + N ++G Y F Sbjct: 233 ADEFEFKATLLTADNLKPYVQYTVKNDINVKGGKNFAKDNVFKLGVNYSF 282 >UniRef50_B7VKI6 Putative uncharacterized protein n=17 Tax=Gammaproteobacteria RepID=B7VKI6_VIBSL Length = 237 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 72/255 (28%), Gaps = 43/255 (16%) Query: 1 MKKINAIILLSSLTSASVFAGAYV---ENREAYNLASDQGE--VMLRVGYNFDMGAG--- 52 MKKI A+ LS ++S FAG+ + + + L G+ FD G Sbjct: 1 MKKIIALSALSLAFASSAFAGSSYVTGNIQFHDDGRIHGSDMTSTLEAGHTFDNSLGGLT 60 Query: 53 -----------IMLTNTYNFQREDELKHGYNEIEG--WYPLFKPTDKLTIQPGGLINDKS 99 + T D N F TD L + G + Sbjct: 61 VYTEFDGIQLGDLEGLTAAETGGDATTGQANAFITVGGEQAFNITDNLWVAAGYQHVFSA 120 Query: 100 IGS-GGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITD 158 S + + Y F +++ R R + D + Y + + + + Sbjct: 121 GESIQFRPLVKIGYNFDNGISISNRTR-------AHIDDTSADADTDYRMDNRIAYSVNE 173 Query: 159 KFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVE---PY 215 + ++ Y + + + PYFE R V+ Sbjct: 174 DLALSYNNVYMIDAEAMDHELRATWTRQ-----------GVQPYFEFRSQANGVDFANGA 222 Query: 216 HREQNQIRIGTKYFF 230 + N G Y F Sbjct: 223 SKTNNAFVFGASYGF 237 >UniRef50_D0XGT9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGT9_VIBHA Length = 247 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 25/231 (10%) Query: 14 TSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQREDELKHGYNE 73 S YV N E + + + + G I +L G Sbjct: 28 ISNGSQIDVYVANEEHHGHGDTNKAYGVEAVWMDESGYFIYAEGETGAHDFYQLGAG--- 84 Query: 74 IEGWYPLFKPTDKLTIQPGGLINDK--SIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNN- 130 FKP+D L + G + G+ L ++Y+ F L R Y++ N Sbjct: 85 -----KYFKPSDDLGLFAYGAYAQGGYADGNELRARLGLDYQATHEFGLHGRIGYDYGNS 139 Query: 131 --------YSSTDLSGELDNNDTY--EIGTYWNFKITDKFSYTFEPHYFMRVN-DFNSSN 179 + + S E D ++ + ++++I ++F + N Sbjct: 140 KMSVSHGDHEHSYHSSEHDTKRSHLGRMDVGFSYEIGHVAEFSFNYVVQKQFESALVEDN 199 Query: 180 GKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + H+E T+ + PY E R ++ + +H E++ I+ G + F Sbjct: 200 DTNLHYEARLTYT---DLVLQPYVEYRQTNKAFDEHHFEESAIQFGASFSF 247 >UniRef50_Q6LL41 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LL41_PHOPR Length = 263 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 81/271 (29%), Gaps = 49/271 (18%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MKK+ + LL+SL++ S A + GE L+ G+ FD+G G + + Sbjct: 1 MKKLLIVSLLASLSAPSFAANNAFVIEQE-----SAGETTLKFGHKFDLGLGHLGLGLEH 55 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSI-------------------- 100 + D LK G F TD I+P + S Sbjct: 56 VLK-DNLKKSKETTVGTSFTFDITDSFYIEPQLAVTMPSDSKIKGSHSFIDEDKTSTKIN 114 Query: 101 -----GSGGAVYLDVNYKFVPWFNLTVRNRYNHNNY--------SSTDLSGELDNNDTYE 147 G+ V + Y F F ++ R RY+ +S + N++ + Sbjct: 115 GEFETGNTYKVGVKAGYSFGEAF-VSARYRYDIREDKLNLRDTSNSKNTKSAKFNDNVHR 173 Query: 148 IGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHW--EITNTFRYRINEHWLPYFEL 205 + + + + + + + GK E PY + Sbjct: 174 TDLTAGYNF-EIVTVSANWIHKEGESKIKNVGGKVTASANEYEFKATGNGFGDLKPYVQY 232 Query: 206 ------RWLDRNVEPYHREQNQIRIGTKYFF 230 + N +G +Y F Sbjct: 233 TVKSDIDSKGNLGKEKVNPDNVFMLGMQYNF 263 >UniRef50_A6D8B8 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D8B8_9VIBR Length = 248 Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 40/157 (25%), Gaps = 9/157 (5%) Query: 79 PLFKPTDKLTIQPGGL-INDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLS 137 F+ +D + G + + Y F +L+ R R Y+ D Sbjct: 96 QRFQMSDNFWLGAGYEHLMQVGETMQYRPLFKIGYDFEQGLSLSHRTRIEV--YAQHDRW 153 Query: 138 GELDNNDTYEIGTYWNFKI-TDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRIN 196 G + Y + T + Y D + Sbjct: 154 GYKPD-TDYRFDNKIAYTFQTHPVKIHYNNVYHAIGAYGPYYPYTDSTMDHEFRLTLT-K 211 Query: 197 EHWLPYFEL---RWLDRNVEPYHREQNQIRIGTKYFF 230 + PYFE + + + + IG Y F Sbjct: 212 YAFQPYFEYKSQGDVKVSRYGHGVANSAFLIGGIYNF 248 >UniRef50_C5BBJ1 Oligogalacturonate-specific porin KdgM n=7 Tax=Enterobacteriaceae RepID=C5BBJ1_EDWI9 Length = 59 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 172 VNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 +D N K ++E YRIN + PY E+ + N R Q + R+G +Y F Sbjct: 2 YSDALKYNNKKTNYEHNVALSYRINPSFTPYVEVGNVAVNSNSDAR-QTRYRVGLQYHF 59 >UniRef50_C9QGR6 Putative uncharacterized protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QGR6_VIBOR Length = 267 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 84/278 (30%), Gaps = 59/278 (21%) Query: 1 MKKIN--AIILLSSLTSASVFAGAYVENRE--AYNLASDQGEVM-LRVGYNFDMGAGIML 55 MKK+ +L + S +G V+ A+ + VGY+F+ G + Sbjct: 1 MKKLAVSTAVLAAMAASPVFASGLSVDVYGDRAFAGDKKGNSTQGVEVGYDFENGLSLSA 60 Query: 56 TNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQP--GGLINDKSIGSGGAVYLDVNYK 113 T N + + F+ T+ + +QP G ++ND +D Y+ Sbjct: 61 EATTNKDLDLDAAWK----------FQLTESVYLQPSVGYVLNDSKTYRAEDPNVDGGYE 110 Query: 114 F--------------------VPWFNLTVRNRYNHN--NYSSTDLSGELD---------- 141 F F T+R RY N + T +G D Sbjct: 111 FLELKGTNSDVAKAGLEFGYDNSQFFYTLRGRYEANTSKLALTHETGGYDAKGNPVNVER 170 Query: 142 -----NNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNG----KDHHWEITNTFR 192 ++ + ++ F D N + W Sbjct: 171 HSIGARSEIARFDSLIGYRFDYVTLTAKGIRKFELNKDIKRLNREMNTDNDRWSGEFKAT 230 Query: 193 YRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 + PY E D+ + ++ I+IGTK+ F Sbjct: 231 VTAWDGVAPYVEYTH-DKAFTQHGKDDQIIKIGTKFTF 267 >UniRef50_A6CVK5 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVK5_9VIBR Length = 227 Score = 52.8 bits (125), Expect = 8e-06, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 73/241 (30%), Gaps = 25/241 (10%) Query: 1 MKKINAIILLSSLTSASVFAGAY---VENREAYNLASDQGEVMLRVGYNFDMGAGIMLTN 57 MKK ++ L+S+ + + A VE + + + + D G+GI Sbjct: 1 MKKTAIVLALTSVFATNAMAEGVTGGVELDAKFVDGAAEYK--------ADNGSGIKAFI 52 Query: 58 TYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGG-----AVYLDVNY 112 Y + E E + ++ DK + V Sbjct: 53 GYEGFGASAKRKANFENEYNLNYTHDFGNIWLKGEYEFVDKKSRQQPANDQNKFGITVGG 112 Query: 113 KFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRV 172 F+ ++R R + + S+T D Y ++T++ + + Sbjct: 113 NVAELFDTSLRLRKDTDLNSNTLAP----RGDIYRFDLAAGKQVTERVYLNAKVVGQKQN 168 Query: 173 ND---FNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYF 229 KD + + + ++ +PY E+ + R ++G + Sbjct: 169 KKEAITVGDKNKDSIYNLELRATFTAIDNMIPYVEVGN-EGKFGTDTRNTY-GKVGVVFP 226 Query: 230 F 230 F Sbjct: 227 F 227 >UniRef50_A6FJR0 Putative uncharacterized protein (Fragment) n=1 Tax=Moritella sp. PE36 RepID=A6FJR0_9GAMM Length = 149 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 35/150 (23%), Gaps = 22/150 (14%) Query: 101 GSGGAVYLDVNYKFVPWFNLTVRNRYNH------------NNYSSTDLSGELDNNDTYEI 148 G+ L Y F L+ R RY NN + + + + + Sbjct: 2 GNTAKFGLKTGYNFDNGLYLSGRYRYEMATDTLKLTEFDNNNKPTGNRIKVEFDKNVHRT 61 Query: 149 GTYWNFKITDKFSYTFEPHYFMRVNDF-----NSSNGKDHHWEITNTFRYRINEHWLPYF 203 + + + + + N + PY Sbjct: 62 DVTFGYS-MEMVDISTNWVHKELKNKGSLILDIQKKSSRIDY-YEFKATVNAFGDIKPYV 119 Query: 204 ELR-WLDRNVEPYH--REQNQIRIGTKYFF 230 + V + N ++G Y F Sbjct: 120 QYTLDQTEVVFGNQKLKADNLFKVGVNYTF 149 >UniRef50_C5D0H1 Conserved repeat domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5D0H1_VARPS Length = 2434 Score = 46.2 bits (108), Expect = 8e-04, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 15/171 (8%) Query: 57 NTYNFQREDELKHGYNEIEGWYPLFKPTDKLTI--------QPGGLINDKSIGSGGAVYL 108 N Y + + N I FK TD+ ++ Q GG N + G+G A L Sbjct: 2074 NEYRLADSIDGRAAQNAIGVR-NTFKLTDRFSLTGGLEHTRQMGGYANSANNGTGYAAGL 2132 Query: 109 DVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHY 168 + + S + D+ +T T + +KIT +S Sbjct: 2133 GESTAVTAGVE----YLTDTYKLSGILEGRKGDDANTRLFSTGFGYKITPAWSLLARSVV 2188 Query: 169 FMRVNDFNSSNGKDHHWEITNTFRYR--INEHWLPYFELRWLDRNVEPYHR 217 S + H YR ++ W + + Sbjct: 2189 SDSEGQGASGGNERHLQRHQIGLAYRPVDDDTWNALMRYERRSERIVGHGN 2239 >UniRef50_A6D6T6 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D6T6_9VIBR Length = 189 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/124 (9%), Positives = 32/124 (25%), Gaps = 8/124 (6%) Query: 113 KFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRV 172 P F + + + D + + + Y + S + + Sbjct: 21 AADPGFYVGGGYGLVKSKLKNLDNDNSESLDAGHSLRVYGGYAFNRIVSLEGSYTKYGKT 80 Query: 173 NDFNSSNGKDHHWEITNTFRYRINEHWLPYFELR----WLDRNVEPYHREQN----QIRI 224 + + +T Y + + P+ + L+ + + I Sbjct: 81 EEDHGYTWDPTTLALTANLGYTFDSGFRPFATVGLSYLDLNEAGDKKFTSDTGTAFRYGI 140 Query: 225 GTKY 228 G +Y Sbjct: 141 GVEY 144 >UniRef50_D2RKT4 OmpA/MotB domain protein n=2 Tax=Acidaminococcus RepID=D2RKT4_ACIFE Length = 351 Score = 42.7 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 22/198 (11%) Query: 5 NAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYN-------FDMGAGIMLTN 57 + +L+S+ S A + + L + + N FD G G L++ Sbjct: 8 VTLAVLASVASMGFAAPQTSWEQGEWQLNAGAWAPKAKFDGNESSTKWNFDGGVGYGLSD 67 Query: 58 TYN--------FQREDELKHGYNEIEGWYPLFKPTDKLTIQPG-GLINDKSIGSGGAVYL 108 + + + K ++ E ++ + G IN+ GS + Sbjct: 68 KWALEYNYRGLKTKAGDFKTDGDQNEVN-LVYSLNKNWALFGGWNRINNDFDGSYHGPHT 126 Query: 109 -DVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPH 167 + VR +Y+ + G L T + + I D + Sbjct: 127 GSADSVINNVAQFGVRTKYDLAKNLAFYAEGALGTKKTSQWDAGLAYTIADNWDLNAGYR 186 Query: 168 YFMRVNDFNSSNGKDHHW 185 Y D ++ + + Sbjct: 187 YV----DTKLNDDSNIKY 200 >UniRef50_UPI000175872E PREDICTED: hypothetical protein n=1 Tax=Tribolium castaneum RepID=UPI000175872E Length = 599 Score = 42.7 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 11/161 (6%) Query: 47 FDMGAGIMLTNTYNFQREDELKHGY---NEIEGWYPLFKPTDKLTIQPGGLINDKSIGSG 103 F+ G + + YN+ D + + + Y + G Sbjct: 403 FNSGNWLWFDSGYNWNGVDFDFWAFYSGDGFDSGYNWYN-NINFGGFYSGNWLWFDSWYN 461 Query: 104 GAVYLDV-NYKFVPWFNL---TVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDK 159 + + W R + + ++ G ++ G ++N + D Sbjct: 462 WYFNVKFRGFNSGNWLWFDSGHNWYRVDFDFWAFYSRDGLWFDSGNNWHGLWFNAR--DN 519 Query: 160 FSYTFEPHYFMRVNDFNSSNGKDHHW-EITNTFRYRINEHW 199 ++ + F N +G + +W + Y N W Sbjct: 520 WNSDVDFRRFNSRNWLRFDSGYNWYWVDFDFWTFYAGNGLW 560 >UniRef50_D1AH59 Putative uncharacterized protein n=3 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH59_SEBTE Length = 300 Score = 42.4 bits (98), Expect = 0.013, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 46/160 (28%), Gaps = 10/160 (6%) Query: 78 YPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLS 137 Y F ++ + + + Y F ++L + + + Sbjct: 95 YGNFNFNPTYELRITDMRESSEKTTDHRFQPNWGYTFNDQWSLYNGWLFGYRQDDAYRGY 154 Query: 138 GELD--NNDTYEIGTYWNFKITDKFSYT---FEPHYFMRVNDFNSSNGKDHHWEITNTFR 192 E+ ++ +E+ T +K D + + + + +D K W++ + Sbjct: 155 SEVKSWDDYFHELETGVKYKFADSQAVSFSIYNEYVKSEKSDMQYRAHKFDDWQVRIAYE 214 Query: 193 YRINEH--WLPYFELRWLDRNVEP---YHREQNQIRIGTK 227 + + P+ + + R G K Sbjct: 215 KKFDNGIAVSPFIRYSVSSKTENSNGVDTDHDGKGRYGVK 254 >UniRef50_B2T7F2 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B2T7F2_BURPP Length = 173 Score = 42.0 bits (97), Expect = 0.014, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 47/163 (28%), Gaps = 18/163 (11%) Query: 68 KHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYN 127 + G +E G Y FK + G + +K+ + Y F + Sbjct: 28 QTGASEFAGPYVGFKLGVNTSDASGVV--NKASHTTAFPGFTAGYNFDVDRFVAG----- 80 Query: 128 HNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEI 187 ++ +L + T + K+ F+ D+ HW Sbjct: 81 ------AEVFADLHHGSTTYKDGGLDAKLGLPFNQFMPYVRIGLTTDWP---DIRPHW-- 129 Query: 188 TNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 Y+ +H E N + R N IG +Y F Sbjct: 130 GLGVEYKFAKHMSAVGEWTTDTSNHDGTRRTNNSFTIGVQYHF 172 >UniRef50_P55448 Putative outer membrane protein y4fJ n=6 Tax=Rhizobiaceae RepID=Y4FJ_RHISN Length = 343 Score = 41.6 bits (96), Expect = 0.023, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 36/128 (28%), Gaps = 6/128 (4%) Query: 14 TSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQREDELKHGYNE 73 ++ G ++ Y+ ++G + V G + + Sbjct: 206 IVSATVGGVSIDLLGGYDTEVEEGAIRALVSAELGPGV-FQIAGVWASDPNVYFAASEWT 264 Query: 74 IEGWYPLFKPTDKLTIQPGGLIN----DKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHN 129 + Y + T+KL I PG S L V+YK V +Y Sbjct: 265 VATSYR-YNATEKLAITPGLHYWGDYGFVSDADQWRGGLAVDYKITSGLASRVSVQYTSR 323 Query: 130 NYSSTDLS 137 + + Sbjct: 324 DIGADTED 331 >UniRef50_B8LAJ4 Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAJ4_9GAMM Length = 1229 Score = 41.2 bits (95), Expect = 0.025, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 51/208 (24%), Gaps = 23/208 (11%) Query: 44 GYNFDMGAGIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSG 103 G G + E + + + + D I D Sbjct: 999 GGRTSPGTEWQSKLEWRRDTGAERRTQW--VSTNRLSHRLNDSWRIAARFNYADTDDAIN 1056 Query: 104 GAVY-------LDVNYKF--VPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNF 154 L Y+ + L R Y ++ + ++G + T + + Sbjct: 1057 PVAGARFIEGNLGFAYRPWDNDRWALFGRYSYLYDLSTMGQVNGVDYDQRTQVLSLEGVY 1116 Query: 155 KITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITN---TFRYRINEHWLPYFELRWLDRN 211 +I ++ + + G RY + W E R LD Sbjct: 1117 RIDQRWEVAAKAARREGEVRYGRGTGPWFDSATNFASGQLRYDLYYQWHGLLEYRLLDVR 1176 Query: 212 VEPY--------HREQNQ-IRIGTKYFF 230 R+ + R+G Y F Sbjct: 1177 DGGSRQGWLAGVDRDIGRNFRVGVGYNF 1204 >UniRef50_UPI0001BC636B membrane protein involved in aromatic hydrocarbon degradation n=2 Tax=Fusobacterium RepID=UPI0001BC636B Length = 476 Score = 40.4 bits (93), Expect = 0.048, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 36/172 (20%) Query: 95 INDKSIGSGGAVYLDVNYKFVPWFNLTVRN-----------------------RYNHNNY 131 I+ K +G L NYK +NL +R + + Sbjct: 244 IDSKRRANGVGFVLGANYKANEKWNLGMRYDSRVKLNFKANTTEKEIAIPTVGGIKYIGF 303 Query: 132 SSTDLSGELDNNDTYEIGT------YWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHW 185 +S + + +++TDK+ +Y+ + ++ + Sbjct: 304 TSDLYYPQYKDGKKQRRDLPAILALGTTYQVTDKWMTGLSANYYFNKDAKMDGQKYNNGF 363 Query: 186 EITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRI-------GTKYFF 230 E+ Y++NE W + + + + G KY + Sbjct: 364 EVAFGNEYKLNEKWTVLGSVNYAKTGALKDSYNDIEYALDSVMLGTGLKYQY 415 >UniRef50_Q3M8B4 Cna B-type n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M8B4_ANAVT Length = 980 Score = 40.0 bits (92), Expect = 0.059, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 45/170 (26%), Gaps = 27/170 (15%) Query: 50 GAGIMLTNTYNFQREDELKHGYNEIEGWYPLFK-PTDKLTIQPGGLINDKSIGSGGAVYL 108 G G N +D + G+Y + +D T++ G ++I + L Sbjct: 468 GLGFSGNLAQNAFSDDYNTSDSGSLVGFYQFRQGLSDNFTVEAGL----QAIPNTFQTQL 523 Query: 109 DVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHY 168 ++ L+ + + + + Sbjct: 524 GAIWRIANPVILSGSVGTSFGKLAYNAD-----------LDVQLG-------GLDINANS 565 Query: 169 FMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHRE 218 + + S NG + + YR N + L L R+ + Sbjct: 566 QLFPEGYRSDNGSRERYNHSLEVGYRFNSNLR----LGVLARSRKSDSNS 611 >UniRef50_Q48391 CymA protein n=9 Tax=Gammaproteobacteria RepID=Q48391_KLEOX Length = 346 Score = 39.7 bits (91), Expect = 0.079, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 57/228 (25%), Gaps = 13/228 (5%) Query: 1 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYN 60 MKK ++ +A V + A + R E G + T Sbjct: 1 MKKKLLSASIALALTAPVHSFAASDQRGYKPEDVAFDESFFSFGGHVGTSVEYEDKVTRG 60 Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLIND----------KSIGSGGAVYLDV 110 F D+ + + P I + G L+ Sbjct: 61 FNNTDKKEKTITNEVFNFFYNNPQWNFMGFYSFKIENREQKEPGYYENEDGIKQLFSLNK 120 Query: 111 NYKFVPWFNLTVRNRYNHNNYS--STDLSGELDNNDTYEIGTYWNFKITD-KFSYTFEPH 167 + + + + S D+SG N + I Y + D + Sbjct: 121 GHDLGNGWATGLIYELEYTRSKVYSPDVSGLRKNLAEHSIRPYLTYWNNDYNMGFYSNLE 180 Query: 168 YFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPY 215 Y + D N+ + Y+ +W E + + + Sbjct: 181 YLLSKEDRNAWGKRQEQGYSALFKPYKRFGNWEVGVEFYYQIKTNDEK 228 >UniRef50_Q5E089 Outer membrane protein U paralog, OmpU2 n=6 Tax=Vibrionaceae RepID=Q5E089_VIBF1 Length = 307 Score = 39.7 bits (91), Expect = 0.089, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 18/171 (10%) Query: 61 FQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSI-GSGGAVYLDVNYKFVPWFN 119 D L N I K +D + + G G A N Sbjct: 154 SGEFDALTVQANYIASNT---KKSDSFGLSGMYALPIGLDLGLGYASGEQAGLDADQ-IN 209 Query: 120 LTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSN 179 L +R + S +GE+D D +K DK+ + +Y + Sbjct: 210 LALRYTLDAFMVSGLFTTGEIDKIDAAGYELAAAYK-MDKWVFQGVYNYQ-------EVD 261 Query: 180 GKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF 230 KD + Y++N+ + Y E +QI+ G +Y F Sbjct: 262 SKDTEINVAIEAIYKLNKSFRTYAGY-----KFEQIDDLDDQIQFGLRYDF 307 >UniRef50_D1AFP4 Putative uncharacterized protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AFP4_SEBTE Length = 1222 Score = 39.7 bits (91), Expect = 0.090, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 19/135 (14%) Query: 115 VPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVND 174 N+ R Y N + TD + N+K+T +F+ + + Sbjct: 1063 NNRLNMLGRYSYILNKENDTDRETSYLEESKHIFEAEGNYKLTKRFTTGMKAAVKFEDDY 1122 Query: 175 FNSSNGKDHHWEITNTF-----RYRINEHWLPYFELRWLDRNVEPYHREQNQ-------- 221 + +S+G++ E Y + + W E R+L E + E + Sbjct: 1123 YKTSDGRNIKVEKNFALLGFRQEYEVIKDWDLMAEYRFLADIGENNNTENLKHGALVGVY 1182 Query: 222 ------IRIGTKYFF 230 ++IG Y F Sbjct: 1183 KHIGENLKIGVGYNF 1197 >UniRef50_C6X4B1 Putative uncharacterized protein n=2 Tax=Flavobacteriaceae RepID=C6X4B1_FLAB3 Length = 202 Score = 39.3 bits (90), Expect = 0.094, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 62/207 (29%), Gaps = 38/207 (18%) Query: 44 GYNFDMGAGIMLT-NTYNFQREDELKHGYNEIEGWYPLF---KPTDKLTIQP-------G 92 F GI N + + +L ++I LF + +IQP G Sbjct: 14 SLTFAQQFGIKAGMNVSSLSTDSQLSDQGSKIGFNAGLFMNAPLAENFSIQPELLYSQMG 73 Query: 93 GLINDKSIGSGGA-----VYLDV----NYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNN 143 + G+ A Y+ + Y P F L + + + E DNN Sbjct: 74 DKYDQTIAGTTYARSRHLDYVTLPVMFQYNATPSFYLEAGPEFGLMVNAKNKFTNETDNN 133 Query: 144 DTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYF 203 E G Y + T F Y+ +I T RY + Sbjct: 134 TITESGDYKDQLNTFNFGVGLGAGYYFTP-------------QIGLTARYVAG-----FT 175 Query: 204 ELRWLDRNVEPYHREQNQIRIGTKYFF 230 ++ D N + N ++G Y F Sbjct: 176 DIYNSDNNGSDDSVKNNVFQVGLAYKF 202 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.134 0.360 Lambda K H 0.267 0.0414 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,196,072,496 Number of Sequences: 3077464 Number of extensions: 45442267 Number of successful extensions: 154476 Number of sequences better than 1.0e-01: 182 Number of HSP's better than 0.1 without gapping: 75 Number of HSP's successfully gapped in prelim test: 190 Number of HSP's that attempted gapping in prelim test: 152877 Number of HSP's gapped (non-prelim): 862 length of query: 230 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 106 effective length of database: 658,790,820 effective search space: 69831826920 effective search space used: 69831826920 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 91 (39.6 bits)