Phyre 2 alignment of P76096 with c2l3nA_

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Job Description | P76096
Confidence | 1.78% | Date | Thu Jan 5 12:18:50 GMT 2012
Rank | 47 | Aligned Residues | 36
% Identity | 42% | Template | c2l3nA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:dna-binding protein rap1, telomere length regulator taz1; | PDBTitle: solution structure of rap1-taz1 fusion protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | A | I | Q | I | L | A | S | Y | P | P | S | G | K | E | K | G | Y | E | A | Q | P | S | G | G | . | . | . | . | V | S | A | H | Y | L | H | Y | D | S | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | A | I | A | K | L | L | S | K | Q | T | S | G | G | S | G | G | S | K | L | G | G | S | G | G | S | R | K | D | L | S | V | K | G | M | L | Y | D | S | D
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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