 |
| Job Description | P68767 | | Confidence | 26.17% | Date | Thu Jan 5 12:11:12 GMT 2012 |
| Rank | 102 | Aligned Residues | 37 |
| % Identity | 27% | Template | c2posD_ |
| PDB info |
PDB header:toxin | Chain: D: PDB Molecule:sylvaticin; |
PDBTitle: crystal structure of sylvaticin, a new secreted protein2 from pythium sylvaticum
|
| Resolution | 1.60 Å |
|
|   |   |
275 | . | . | . | . | 280 | . | . | . | . | . | . | |
|
|
. | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | S | G | G | I | S | I | K | P | S | E | G | . |
. |
. |
M | D | E | M | K | Y | D | M | C | G | A | A | A | V | Y | G | V | M | R | M | V | A | E | L | Q | L | P |
| Query Conservation |   |
|
|
|
|   |
|
|
|
|   |   |   | . | . | . |
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|   |   |   |
| Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
| . |
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   | . |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|   |   |   |   |
| Template Sequence |   |
A | S | . |
G | W | Q | M | L | P | P | A | G | Y | P | T | P | E | Q | L | K | L | . |
M | C | G | T | A | E | C | F | T | L | I | D | A | I | K | A | L | N | P | N |
| Template Known Secondary structure |   |
 |  | . | S |
|
| T | T | T | T |
|
| S |
|
|  |  |  |  |  |  | . |  |  | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| Template Predicted Secondary structure |   |
 |
| . |
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|