Phyre 2 alignment of P36661 with c1rfoC_

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Job Description | P36661
Confidence | 4.82% | Date | Thu Jan 5 11:53:33 GMT 2012
Rank | 75 | Aligned Residues | 19
% Identity | 47% | Template | c1rfoC_
PDB info | PDB header:viral protein | Chain: C: PDB Molecule:whisker antigen control protein; | PDBTitle: trimeric foldon of the t4 phagehead fibritin
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | P | V | D | G | D | G | Y | C | L | L | R | A | I | L | V | L | K | Q | H | D | Y | S | W | A | L | V | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | P | R | D | G | Q | A | Y | . | . | . | . | . | . | . | . | . | V | R | K | D | G | E | W | V | L | L | S
Template Known Secondary structure |  |  |  |  | S | S |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  | T | T |  |  |  |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 20 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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