75 d2paja2 Probab=99.51   E-value=1.9e-13  Score=107.28  Aligned_columns=272  Identities=14%

Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCC-----HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             250420002212223467667478-----889999999987318834710677887999999999999863205612200
Q batch____        53 PGFIDVQLNGCGGVQFNDTAEAVS-----VETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALG  127 (382)
Q Consensus        53 PG~ID~H~H~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (382)
                      |||||+|+|++++...+.......     .........+.++.|+|++.+.+............................
T Consensus         1 PGlID~H~H~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (282)
T d2paja2           1 PAWVNTHHHLFQSLLKGEPFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVL   80 (282)
T ss_dssp             CCEECCCCCGGGGGCCSCCCGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEECCCCHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
T ss_conf             98150210010024588202321899999999999999999829979983677776510179999999865430263786


Q ss_pred             EECCCCCCCHHHCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
Q ss_conf             00015656801014458466413788999998622783589871687542899999997798078716616989999999
Q batch____       128 LHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGF  207 (382)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~  207 (382)
                      ...................................................       ....................+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~  153 (282)
T d2paja2          81 LRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVM-------APTTVLYSISPREMRETAAVAR  153 (282)
T ss_dssp             EECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEE-------CCTTTTTSSCHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE-------CCCCCCCCCCHHHHHHHHHHHH
T ss_conf             204457776655465433442348999999999888743202332000000-------2577544489899999999999


Q ss_pred             HCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCEEECCHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCC
Q ss_conf             83994787403544322211102467885167851888414644688899999962217838961721213886322253
Q batch____       208 RAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIF  287 (382)
Q Consensus       208 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (382)
                      +.|.....|....        ...................++.+..+.......+.   +...+.+|.++...+      
T Consensus       154 ~~g~~~~~H~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~------  216 (282)
T d2paja2         154 RLGLRMHSHLSGK--------SPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQT---GTGVAHCPQSNGRLP------  216 (282)
T ss_dssp             HTTCEEEEECCCC--------CHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHH---TCEEEECHHHHHCCC------
T ss_pred             HCCCCEEEECCCC--------CHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHC---CCEEEECHHHHHHCC------
T ss_conf             7699827415777--------86676775487435737631320789999999861---995998500323059------


Q ss_pred             CCHHHHHHCCCEEECCCCCCCCCCCH-----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             32256885892783478787765798-----99999999973999889999882528998196776221
Q batch____       288 AGKTIYYRNGLCVDENGTLSGSSLTM-----IEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGT  351 (382)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~eal~~~T~~~A~~lgl~~~~G~  351 (382)
                        .+.+.+.|+.+...++.+......     ...+..+++..++|++|+|+++|+|||++||+++ +|+
T Consensus       217 --v~~~~~~G~~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~g~~~~eal~~aT~n~A~~lgldd-vGk  282 (282)
T d2paja2         217 --VREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLASIAEVIHWGTAGGARVMGLDE-VGK  282 (282)
T ss_dssp             --CTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTCCCHHHHHHHHTHHHHHHHTCTT-SCC
T ss_pred             --HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC-CCC
T ss_conf             --899995898199984578777788989999999999985299989999997122798738612-589