 |
| Job Description | P11349 | | Confidence | 60.95% | Date | Thu Jan 5 11:32:35 GMT 2012 |
| Rank | 69 | Aligned Residues | 57 |
| % Identity | 19% | Template | d1oe4a_ |
| SCOP info | Uracil-DNA glycosylase-like
| Uracil-DNA glycosylase-like
| Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
|
| Resolution | 2.0 |
|
 |
|   |   |
353 | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | W | Y | V | P | P | L | S | P | I | Q | S | A | A | D | A | G | E | L | G | S | N | G | I | L | P | D | V | E | S | L | R | I | P | V | . |
. |
. |
. |
. |
Q | Y | L | A | N | L | L | T | A | G | D | T | K | P | V | L | R | A | L | K | R | M | L | A | M | R | H | Y |
| Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|
|
|   |
|   |   |   | . | . | . |   |
|
|
|   |
|
|   |   |
|   |   | . | . |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |
|   |   | . |
|
|
|
|
|   |   |
|
|   |
|
|   |
| Template Sequence |   |
V | H | N | H | C | P | L | I | F | M | N | H | . |
. |
. |
S | G | K | N | L | T | P | T | D | L | P | K | . |
. |
A | Q | R | D | T | L | L | E | I | C | D | E | A | L | C | Q | A | V | R | V | L | G | V | K | L | . |
V | I | G | V | G | R | F | S | E | Q | R | A | R |
| Template Known Secondary structure |   |
 |  |  | S |
|
|
|  |  |  |
| T | . | . | . | T |
|
|  |  |
| G | G | G | S |
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  | . |  |  |  |  | S |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |
|
| . | . | . |
|
|
|
|
|
|  |  |  |
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | |
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . | . | . | 230 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|