Phyre 2 alignment of P11349 with c2wj8N_

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Job Description | P11349
Confidence | 15.01% | Date | Thu Jan 5 11:32:35 GMT 2012
Rank | 95 | Aligned Residues | 30
% Identity | 20% | Template | c2wj8N_
PDB info | PDB header:rna binding protein/rna | Chain: N: PDB Molecule:nucleoprotein; | PDBTitle: respiratory syncitial virus ribonucleoprotein
Resolution | 3.29 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 411 | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | M | R | H | Y | K | R | A | E | T | V | D | G | K | V | D | T | R | A | L | E | E | V | G | L | T | E | A | Q | A | Q | E | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | A | K | A | Y | A | E | Q | L | K | E | N | G | V | I | N | Y | S | V | L | . | . | . | D | L | T | A | E | E | L | E | A | I
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | T | T | S | S | . | . | . |  |  |  | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 349 | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . |  |  |  | . | 370 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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