Phyre 2 Results for P11349

Email | l.a.kelley@imperial.ac.uk
Description | P11349
Date | Thu Jan 5 11:32:35 GMT 2012
Unique Job ID | 2081ee5c13e1a6ff

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1y5ib1 |
|  | 100.0 | 100 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
2 | c2ivfB_ |
|  | 100.0 | 41 | PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
3 | c1ti2F_ |
|  | 100.0 | 35 | PDB header:oxidoreductase Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici
4 | d1kqfb1 |
|  | 100.0 | 28 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
5 | c2vpyB_ |
|  | 100.0 | 39 | PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)
6 | c1hfeL_ |
|  | 100.0 | 14 | PDB header:hydrogenase Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans
7 | c1kqfB_ |
|  | 100.0 | 27 | PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli
8 | c1gx7A_ |
|  | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase
9 | c1c4cA_ |
|  | 100.0 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum
10 | d1vlfn2 |
|  | 100.0 | 35 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
11 | d1h0hb_ |
|  | 100.0 | 26 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
12 | d1hfel1 |
|  | 99.9 | 12 | Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase
13 | d3c8ya1 |
|  | 99.9 | 13 | Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase
14 | c3lx4B_ |
|  | 99.9 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:fe-hydrogenase; PDBTitle: stepwise [fefe]-hydrogenase h-cluster assembly revealed in the2 structure of hyda(deltaefg)
15 | c3gyxJ_ |
|  | 99.4 | 19 | PDB header:oxidoreductase Chain: J: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas
16 | d1jnrb_ |
|  | 99.4 | 18 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
17 | d7fd1a_ |
|  | 99.3 | 26 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
18 | c2v2kB_ |
|  | 99.3 | 21 | PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis
19 | d1h98a_ |
|  | 99.3 | 22 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
20 | d3c7bb1 |
|  | 99.2 | 27 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
21 | d1bc6a_ |
| not modelled | 99.2 | 25 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
22 | c1gthD_ |
| not modelled | 99.2 | 19 | PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
23 | d1hfel2 |
| not modelled | 99.1 | 20 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
24 | d1clfa_ |
| not modelled | 99.0 | 32 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
25 | d1fcaa_ |
| not modelled | 98.9 | 29 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
26 | d1dura_ |
| not modelled | 98.9 | 30 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
27 | c2gmhA_ |
| not modelled | 98.9 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone
28 | d2fdna_ |
| not modelled | 98.9 | 31 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
29 | d2fug91 |
| not modelled | 98.9 | 30 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
30 | c2fugG_ |
| not modelled | 98.9 | 30 | PDB header:oxidoreductase Chain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
31 | c3c7bE_ |
| not modelled | 98.8 | 25 | PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus
32 | d2gmha3 |
| not modelled | 98.8 | 17 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:ETF-QO domain-like
33 | c2zvsB_ |
| not modelled | 98.8 | 30 | PDB header:electron transport Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli
34 | d1gtea5 |
| not modelled | 98.8 | 22 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
35 | d1blua_ |
| not modelled | 98.7 | 26 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
36 | c2c3yA_ |
| not modelled | 98.7 | 29 | PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus
37 | c2fgoA_ |
| not modelled | 98.7 | 28 | PDB header:electron transport Chain: A: PDB Molecule:ferredoxin; PDBTitle: structure of the 2[4fe-4s] ferredoxin from pseudomonas2 aeruginosa
38 | d1xera_ |
| not modelled | 98.7 | 27 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Archaeal ferredoxins
39 | d2c42a5 |
| not modelled | 98.6 | 24 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
40 | d1rgva_ |
| not modelled | 98.6 | 34 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
41 | d1jb0c_ |
| not modelled | 98.6 | 25 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
42 | c2v4jE_ |
| not modelled | 98.6 | 23 | PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration
43 | c3bk7A_ |
| not modelled | 98.5 | 35 | PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
44 | d1vjwa_ |
| not modelled | 98.4 | 17 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
45 | c2v4jA_ |
| not modelled | 98.4 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration
46 | c3c7bA_ |
| not modelled | 98.4 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus
47 | d3c8ya3 |
| not modelled | 98.3 | 19 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
48 | d1iqza_ |
| not modelled | 97.9 | 24 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
49 | d2fug34 |
| not modelled | 97.9 | 14 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
50 | c1dwlA_ |
| not modelled | 97.8 | 21 | PDB header:electron transfer Chain: A: PDB Molecule:ferredoxin i; PDBTitle: the ferredoxin-cytochrome complex using heteronuclear nmr2 and docking simulation
51 | c2fugC_ |
| not modelled | 97.6 | 26 | PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
52 | d1fxra_ |
| not modelled | 97.5 | 18 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
53 | d1sj1a_ |
| not modelled | 97.4 | 16 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
54 | d2v4jb1 |
| not modelled | 97.4 | 33 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
55 | c3cf4A_ |
| not modelled | 97.0 | 28 | PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex
56 | d2bs2b1 |
| not modelled | 95.9 | 20 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
57 | d1kf6b1 |
| not modelled | 95.6 | 25 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
58 | d1nekb1 |
| not modelled | 95.5 | 28 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
59 | c2bs2E_ |
| not modelled | 95.3 | 20 | PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes
60 | c1nekB_ |
| not modelled | 95.2 | 24 | PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound
61 | c2b76N_ |
| not modelled | 94.8 | 19 | PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation
62 | c2h89B_ |
| not modelled | 94.5 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound
63 | d2v4ja1 |
| not modelled | 93.8 | 29 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
64 | d3c7ba1 |
| not modelled | 93.3 | 35 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
65 | c2vdcI_ |
| not modelled | 90.6 | 23 | PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications.
66 | d1ugpa_ |
| not modelled | 69.9 | 31 | Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain
67 | d1gtea1 |
| not modelled | 65.9 | 31 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Dihydropyrimidine dehydrogenase, N-terminal domain
68 | d2d6fc2 |
| not modelled | 64.4 | 26 | Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain
69 | d1oe4a_ |
| not modelled | 60.9 | 19 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
70 | d1zq1c2 |
| not modelled | 59.3 | 25 | Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain
71 | c2z6vA_ |
| not modelled | 50.9 | 31 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of sulfotransferase stf9 from2 mycobacterium avium
72 | c2dxbR_ |
| not modelled | 46.3 | 31 | PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers
73 | c2d6fC_ |
| not modelled | 37.9 | 20 | PDB header:ligase/rna Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit e; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
74 | c3qyhG_ |
| not modelled | 35.3 | 18 | PDB header:lyase Chain: G: PDB Molecule:co-type nitrile hydratase alpha subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-h71l from2 pseudomonas putida.
75 | d1ujpa_ |
| not modelled | 34.5 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes
76 | c1m2oA_ |
| not modelled | 33.0 | 25 | PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex
77 | c1g8jC_ |
| not modelled | 31.9 | 26 | PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis
78 | c3ktwA_ |
| not modelled | 25.2 | 17 | PDB header:rna/rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: crystal structure of the srp19/s-domain srp rna complex of sulfolobus2 solfataricus
79 | d1brwa2 |
| not modelled | 24.0 | 12 | Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
80 | d1jida_ |
| not modelled | 23.4 | 13 | Fold:SRP19 Superfamily:SRP19 Family:SRP19
81 | d2phpa1 |
| not modelled | 22.9 | 18 | Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:Phosphomethylpyrimidine kinase C-terminal domain-like
82 | c3eg9B_ |
| not modelled | 22.7 | 25 | PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin
83 | d1djqa3 |
| not modelled | 22.5 | 45 | Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:N-terminal domain of adrenodoxin reductase-like
84 | d2nyga1 |
| not modelled | 22.3 | 14 | Fold:TTHA0583/YokD-like Superfamily:TTHA0583/YokD-like Family:Aminoglycoside 3-N-acetyltransferase-like
85 | d1a9xa1 |
| not modelled | 21.8 | 15 | Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain
86 | d1fxda_ |
| not modelled | 21.4 | 29 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
87 | c3gxgA_ |
| not modelled | 20.6 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase (duf442); PDBTitle: crystal structure of putative phosphatase (duf442) (yp_001181608.1)2 from shewanella putrefaciens cn-32 at 1.60 a resolution
88 | c2fugA_ |
| not modelled | 18.6 | 27 | PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
89 | d1uoua2 |
| not modelled | 17.2 | 10 | Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
90 | c3dluA_ |
| not modelled | 17.0 | 16 | PDB header:rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.
91 | c3fpnA_ |
| not modelled | 16.9 | 16 | PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains
92 | c3a5iB_ |
| not modelled | 16.6 | 14 | PDB header:protein transport Chain: B: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha
93 | c3c6fD_ |
| not modelled | 15.6 | 15 | PDB header:structural genomics, unknown function Chain: D: PDB Molecule:yetf protein; PDBTitle: crystal structure of protein bsu07140 from bacillus subtilis
94 | d1ddfa_ |
| not modelled | 15.5 | 18 | Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD
95 | c2wj8N_ |
| not modelled | 15.0 | 20 | PDB header:rna binding protein/rna Chain: N: PDB Molecule:nucleoprotein; PDBTitle: respiratory syncitial virus ribonucleoprotein
96 | c1z63A_ |
| not modelled | 14.9 | 10 | PDB header:hydrolase/dna complex Chain: A: PDB Molecule:helicase of the snf2/rad54 hamily; PDBTitle: sulfolobus solfataricus swi2/snf2 atpase core in complex2 with dsdna
97 | c2x49A_ |
| not modelled | 14.8 | 14 | PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva
98 | c1m2vB_ |
| not modelled | 14.5 | 26 | PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the yeast sec23/24 heterodimer
99 | c1moxB_ |
| not modelled | 14.1 | 24 | PDB header:transferase/growth factor Chain: B: PDB Molecule:epidermal growth factor receptor; PDBTitle: crystal structure of human epidermal growth factor receptor (residues2 1-501) in complex with tgf-alpha