15/01/2012 01:40:32 : INFO  : Run start: Sun Jan 15 01:40:31 GMT 2012
15/01/2012 01:40:39 : INFO  : Initialised job
15/01/2012 01:40:41 : INFO  : Renaming log file 'phyre2_20120115_014030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/2081ee5c13e1a6ff/phyre_20120115_014030.log'
15/01/2012 01:40:43 : INFO  : Initialised job:
Sequence
>batch____
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQE
KYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKS
QPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYL
PRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGK
SEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLDVF
LDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLS
PIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAET
VDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTF
GDGCHGSDTKFNLFNSRRIDAIDVTSKTEPHP

15/01/2012 01:40:45 : INFO  : Checked sequence
15/01/2012 01:40:49 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 01:40:50 : INFO  : PSI-BLAST 3 iterations
15/01/2012 01:42:53 : INFO  : PSI-BLAST 5 iterations
15/01/2012 01:45:53 : INFO  : Finished PSI-BLAST
15/01/2012 01:45:58 : INFO  : Running Buildali to generate a3m file
15/01/2012 01:54:30 : INFO  : Converting to HMM
15/01/2012 01:54:33 : INFO  : Calibrating HMM
15/01/2012 01:54:59 : INFO  : Searching HMM database
15/01/2012 02:03:22 : INFO  : Finished buildali
15/01/2012 02:03:25 : INFO  : Predicting secondary structure
15/01/2012 02:03:37 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 02:03:40 : INFO  : Predicting Disordered regions
15/01/2012 02:03:46 : INFO  : Predicted Disorder (Disopred)
15/01/2012 02:03:49 : INFO  : Running memsat_svm check
15/01/2012 02:09:43 : INFO  : Globular protein
15/01/2012 02:09:45 : INFO  : Predicted Transmembrane (memsat_svm) ID '2081ee5c13e1a6ff'
15/01/2012 02:09:47 : INFO  : Initialising fold library search
15/01/2012 02:09:53 : INFO  : Initialised search input
15/01/2012 02:09:57 : INFO  : Building Ensemble models
15/01/2012 02:10:04 : INFO  : Building hh.d1y5ib1.model.1.pdb
15/01/2012 02:10:30 : INFO  : Building d1y5ib1.1.pdb
15/01/2012 02:10:55 : INFO  : Building c2ivfB_.2.pdb
15/01/2012 02:11:18 : INFO  : Building c1ti2F_.3.pdb
15/01/2012 02:11:42 : INFO  : Building d1kqfb1.4.pdb
15/01/2012 02:12:06 : INFO  : Building c2vpyB_.5.pdb
15/01/2012 02:12:29 : INFO  : Building c1hfeL_.6.pdb
15/01/2012 02:12:54 : INFO  : Building c1kqfB_.7.pdb
15/01/2012 02:13:18 : INFO  : Building c1gx7A_.8.pdb
15/01/2012 02:13:42 : INFO  : Building c1c4cA_.9.pdb
15/01/2012 02:14:05 : INFO  : Building d1vlfn2.10.pdb
15/01/2012 02:14:30 : INFO  : Building d1h0hb_.11.pdb
15/01/2012 02:14:55 : INFO  : Building d1hfel1.12.pdb
15/01/2012 02:15:19 : INFO  : Building d3c8ya1.13.pdb
15/01/2012 02:15:42 : INFO  : Building c3lx4B_.14.pdb
15/01/2012 02:16:05 : INFO  : Building c3gyxJ_.15.pdb
15/01/2012 02:16:31 : INFO  : Building d1jnrb_.16.pdb
15/01/2012 02:16:55 : INFO  : Building d7fd1a_.17.pdb
15/01/2012 02:17:18 : INFO  : Building c2v2kB_.18.pdb
15/01/2012 02:17:43 : INFO  : Building d1h98a_.19.pdb
15/01/2012 02:18:08 : INFO  : Building d3c7bb1.20.pdb
15/01/2012 02:19:01 : INFO  : Finished HH model building
15/01/2012 02:19:03 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 02:20:07 : INFO  : html domain output complete ID '2081ee5c13e1a6ff'
15/01/2012 02:51:40 : INFO  : Run end  : Sun Jan 15 02:51:38 GMT 2012
