Phyre 2 Results for P11349

Phyre Home | Retrieve Phyre Job Id

Email | l.a.kelley@imperial.ac.uk
Description | P11349
Date | Thu Jan 5 11:32:35 GMT 2012
Unique Job ID | 2081ee5c13e1a6ff

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d1y5ib1
Top template information
Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
Confidence and coverage
Confidence: | 100.0% | Coverage: | 99%
509 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | K | I | R | S | Q | V | G | M | V | L | N | L | D | K | C | I | G | C | H | T | C | S | V | T | C | K | N | V | W | T | S | R | E | G | V | E | Y | A | W | F | N | N | V | E | T | K | P | G | Q | G | F | P | T | D | W | E | N | Q | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? |  | ? | ? |  | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | K | Y | K | G | G | W | I | R | K | I | N | G | K | L | Q | P | R | M | G | N | R | A | M | L | L | G | K | I | F | A | N | P | H | L | P | G | I | D | D | Y | Y | E | P | F | D | F | D | Y | Q | N | L | H | T | A | P | E | G | S | K | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  | ? | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | Q | P | I | A | R | P | R | S | L | I | T | G | E | R | M | A | K | I | E | K | G | P | N | W | E | D | D | L | G | G | E | F | D | K | L | A | K | D | K | N | F | D | N | I | Q | K | A | M | Y | S | Q | F | E | N | T | F | M | M | Y | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | P | R | L | C | E | H | C | L | N | P | A | C | V | A | T | C | P | S | G | A | I | Y | K | R | E | E | D | G | I | V | L | I | D | Q | D | K | C | R | G | W | R | M | C | I | T | G | C | P | Y | K | K | I | Y | F | N | W | K | S | G | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | S | E | K | C | I | F | C | Y | P | R | I | E | A | G | Q | P | T | V | C | S | E | T | C | V | G | R | I | R | Y | L | G | V | L | L | Y | D | A | D | A | I | E | R | A | A | S | T | E | N | E | K | D | L | Y | Q | R | Q | L | D | V | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  | ? |  |  |  |  |  |  | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | L | D | P | N | D | P | K | V | I | E | Q | A | I | K | D | G | I | P | L | S | V | I | E | A | A | Q | Q | S | P | V | Y | K | M | A | M | E | W | K | L | A | L | P | L | H | P | E | Y | R | T | L | P | M | V | W | Y | V | P | P | L | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | P | I | Q | S | A | A | D | A | G | E | L | G | S | N | G | I | L | P | D | V | E | S | L | R | I | P | V | Q | Y | L | A | N | L | L | T | A | G | D | T | K | P | V | L | R | A | L | K | R | M | L | A | M | R | H | Y | K | R | A | E | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | V | D | G | K | V | D | T | R | A | L | E | E | V | G | L | T | E | A | Q | A | Q | E | M | Y | R | Y | L | A | I | A | N | Y | E | D | R | F | V | V | P | S | S | H | R | E | L | A | R | E | A | F | P | E | K | N | G | C | G | F | T | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  | ? | ? | ? |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | .
Sequence |  | G | D | G | C | H | G | S | D | T | K | F | N | L | F | N | S | R | R | I | D | A | I | D | V | T | S | K | T | E | P | H | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d1y5ib1 |

### PDB 1y5i chain B domain 1

Region: 1 - 509
Aligned: 509
Modelled: 509
Confidence: 100.0%
Identity: 100%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins

Phyre2
2 |
| c2ivfB_ |

### PDB 2ivf chain B

Region: 4 - 434
Aligned: 327
Modelled: 332
Confidence: 100.0%
Identity: 41%
PDB header:oxidoreductase
Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit;
PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum

Phyre2
3 |
| c1ti2F_ |

### PDB 1ti2 chain F

Region: 4 - 356
Aligned: 185
Modelled: 188
Confidence: 100.0%
Identity: 35%
PDB header:oxidoreductase
Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit;
PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici

Phyre2
4 |
| d1kqfb1 |

### PDB 1kqf chain B domain 1

Region: 2 - 356
Aligned: 203
Modelled: 215
Confidence: 100.0%
Identity: 28%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins

Phyre2
5 |
| c2vpyB_ |

### PDB 2vpy chain B

Region: 4 - 358
Aligned: 180
Modelled: 182
Confidence: 100.0%
Identity: 39%
PDB header:oxidoreductase
Chain: B: PDB Molecule:nrfc protein;
PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)

Phyre2
6 |
| c1hfeL_ |

### PDB 1hfe chain L

Region: 162 - 480
Aligned: 272
Modelled: 281
Confidence: 100.0%
Identity: 14%
PDB header:hydrogenase
Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1)
PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans

Phyre2
7 |
| c1kqfB_ |

### PDB 1kqf chain B

Region: 4 - 291
Aligned: 177
Modelled: 193
Confidence: 100.0%
Identity: 27%
PDB header:oxidoreductase
Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur
PDBTitle: formate dehydrogenase n from e. coli

Phyre2
8 |
| c1gx7A_ |

### PDB 1gx7 chain A

Region: 177 - 480
Aligned: 257
Modelled: 264
Confidence: 100.0%
Identity: 15%
PDB header:oxidoreductase
Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit;
PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase

Phyre2
9 |
| c1c4cA_ |

### PDB 1c4c chain A

Region: 203 - 475
Aligned: 254
Modelled: 261
Confidence: 100.0%
Identity: 17%
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (fe-only hydrogenase);
PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum

Phyre2
10 |
| d1vlfn2 |

### PDB 1vlf chain N domain 2

Region: 4 - 355
Aligned: 184
Modelled: 187
Confidence: 100.0%
Identity: 35%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins

Phyre2
11 |
| d1h0hb_ |

### PDB 1h0h chain B

Region: 8 - 361
Aligned: 197
Modelled: 209
Confidence: 100.0%
Identity: 26%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins

Phyre2
12 |
| d1hfel1 |

### PDB 1hfe chain L domain 1

Region: 273 - 475
Aligned: 193
Modelled: 203
Confidence: 99.9%
Identity: 12%
Fold: Fe-only hydrogenase
Superfamily: Fe-only hydrogenase
Family: Fe-only hydrogenase

Phyre2
13 |
| d3c8ya1 |

### PDB 3c8y chain A domain 1

Region: 273 - 475
Aligned: 193
Modelled: 200
Confidence: 99.9%
Identity: 13%
Fold: Fe-only hydrogenase
Superfamily: Fe-only hydrogenase
Family: Fe-only hydrogenase

Phyre2
14 |
| c3lx4B_ |

### PDB 3lx4 chain B

Region: 277 - 477
Aligned: 191
Modelled: 201
Confidence: 99.9%
Identity: 16%
PDB header:oxidoreductase
Chain: B: PDB Molecule:fe-hydrogenase;
PDBTitle: stepwise [fefe]-hydrogenase h-cluster assembly revealed in the2 structure of hyda(deltaefg)

Phyre2
15 |
| c3gyxJ_ |

### PDB 3gyx chain J

Region: 177 - 305
Aligned: 128
Modelled: 129
Confidence: 99.4%
Identity: 19%
PDB header:oxidoreductase
Chain: J: PDB Molecule:adenylylsulfate reductase;
PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas

Phyre2
16 |
| d1jnrb_ |

### PDB 1jnr chain B

Region: 177 - 276
Aligned: 100
Modelled: 100
Confidence: 99.4%
Identity: 18%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins

Phyre2
17 |
| d7fd1a_ |

### PDB 7fd1 chain A

Region: 178 - 237
Aligned: 58
Modelled: 60
Confidence: 99.3%
Identity: 26%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: 7-Fe ferredoxin

Phyre2
18 |
| c2v2kB_ |

### PDB 2v2k chain B

Region: 178 - 285
Aligned: 100
Modelled: 108
Confidence: 99.3%
Identity: 21%
PDB header:electron transport
Chain: B: PDB Molecule:ferredoxin;
PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis

Phyre2
19 |
| d1h98a_ |

### PDB 1h98 chain A

Region: 178 - 255
Aligned: 76
Modelled: 78
Confidence: 99.3%
Identity: 22%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: 7-Fe ferredoxin

Phyre2
20 |
| d3c7bb1 |

### PDB 3c7b chain B domain 1

Region: 177 - 232
Aligned: 56
Modelled: 56
Confidence: 99.2%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1y5ib1 |
|  | 100.0 | 100 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
2 | c2ivfB_ |
|  | 100.0 | 41 | PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
3 | c1ti2F_ |
|  | 100.0 | 35 | PDB header:oxidoreductase Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici
4 | d1kqfb1 |
|  | 100.0 | 28 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
5 | c2vpyB_ |
|  | 100.0 | 39 | PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)
6 | c1hfeL_ |
|  | 100.0 | 14 | PDB header:hydrogenase Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans
7 | c1kqfB_ |
|  | 100.0 | 27 | PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli
8 | c1gx7A_ |
|  | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase
9 | c1c4cA_ |
|  | 100.0 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum
10 | d1vlfn2 |
|  | 100.0 | 35 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
11 | d1h0hb_ |
|  | 100.0 | 26 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
12 | d1hfel1 |
|  | 99.9 | 12 | Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase
13 | d3c8ya1 |
|  | 99.9 | 13 | Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase
14 | c3lx4B_ |
|  | 99.9 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:fe-hydrogenase; PDBTitle: stepwise [fefe]-hydrogenase h-cluster assembly revealed in the2 structure of hyda(deltaefg)
15 | c3gyxJ_ |
|  | 99.4 | 19 | PDB header:oxidoreductase Chain: J: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas
16 | d1jnrb_ |
|  | 99.4 | 18 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
17 | d7fd1a_ |
|  | 99.3 | 26 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
18 | c2v2kB_ |
|  | 99.3 | 21 | PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis
19 | d1h98a_ |
|  | 99.3 | 22 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
20 | d3c7bb1 |
|  | 99.2 | 27 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
21 | d1bc6a_ |
| not modelled | 99.2 | 25 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
22 | c1gthD_ |
| not modelled | 99.2 | 19 | PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
23 | d1hfel2 |
| not modelled | 99.1 | 20 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
24 | d1clfa_ |
| not modelled | 99.0 | 32 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
25 | d1fcaa_ |
| not modelled | 98.9 | 29 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
26 | d1dura_ |
| not modelled | 98.9 | 30 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
27 | c2gmhA_ |
| not modelled | 98.9 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone
28 | d2fdna_ |
| not modelled | 98.9 | 31 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
29 | d2fug91 |
| not modelled | 98.9 | 30 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
30 | c2fugG_ |
| not modelled | 98.9 | 30 | PDB header:oxidoreductase Chain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
31 | c3c7bE_ |
| not modelled | 98.8 | 25 | PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus
32 | d2gmha3 |
| not modelled | 98.8 | 17 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:ETF-QO domain-like
33 | c2zvsB_ |
| not modelled | 98.8 | 30 | PDB header:electron transport Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli
34 | d1gtea5 |
| not modelled | 98.8 | 22 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
35 | d1blua_ |
| not modelled | 98.7 | 26 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
36 | c2c3yA_ |
| not modelled | 98.7 | 29 | PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus
37 | c2fgoA_ |
| not modelled | 98.7 | 28 | PDB header:electron transport Chain: A: PDB Molecule:ferredoxin; PDBTitle: structure of the 2[4fe-4s] ferredoxin from pseudomonas2 aeruginosa
38 | d1xera_ |
| not modelled | 98.7 | 27 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Archaeal ferredoxins
39 | d2c42a5 |
| not modelled | 98.6 | 24 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
40 | d1rgva_ |
| not modelled | 98.6 | 34 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins
41 | d1jb0c_ |
| not modelled | 98.6 | 25 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin
42 | c2v4jE_ |
| not modelled | 98.6 | 23 | PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration
43 | c3bk7A_ |
| not modelled | 98.5 | 35 | PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
44 | d1vjwa_ |
| not modelled | 98.4 | 17 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
45 | c2v4jA_ |
| not modelled | 98.4 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration
46 | c3c7bA_ |
| not modelled | 98.4 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus
47 | d3c8ya3 |
| not modelled | 98.3 | 19 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
48 | d1iqza_ |
| not modelled | 97.9 | 24 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
49 | d2fug34 |
| not modelled | 97.9 | 14 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
50 | c1dwlA_ |
| not modelled | 97.8 | 21 | PDB header:electron transfer Chain: A: PDB Molecule:ferredoxin i; PDBTitle: the ferredoxin-cytochrome complex using heteronuclear nmr2 and docking simulation
51 | c2fugC_ |
| not modelled | 97.6 | 26 | PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
52 | d1fxra_ |
| not modelled | 97.5 | 18 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
53 | d1sj1a_ |
| not modelled | 97.4 | 16 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
54 | d2v4jb1 |
| not modelled | 97.4 | 33 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
55 | c3cf4A_ |
| not modelled | 97.0 | 28 | PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex
56 | d2bs2b1 |
| not modelled | 95.9 | 20 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
57 | d1kf6b1 |
| not modelled | 95.6 | 25 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
58 | d1nekb1 |
| not modelled | 95.5 | 28 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain
59 | c2bs2E_ |
| not modelled | 95.3 | 20 | PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes
60 | c1nekB_ |
| not modelled | 95.2 | 24 | PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound
61 | c2b76N_ |
| not modelled | 94.8 | 19 | PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation
62 | c2h89B_ |
| not modelled | 94.5 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound
63 | d2v4ja1 |
| not modelled | 93.8 | 29 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
64 | d3c7ba1 |
| not modelled | 93.3 | 35 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins
65 | c2vdcI_ |
| not modelled | 90.6 | 23 | PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications.
66 | d1ugpa_ |
| not modelled | 69.9 | 31 | Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain
67 | d1gtea1 |
| not modelled | 65.9 | 31 | Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Dihydropyrimidine dehydrogenase, N-terminal domain
68 | d2d6fc2 |
| not modelled | 64.4 | 26 | Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain
69 | d1oe4a_ |
| not modelled | 60.9 | 19 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
70 | d1zq1c2 |
| not modelled | 59.3 | 25 | Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain
71 | c2z6vA_ |
| not modelled | 50.9 | 31 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of sulfotransferase stf9 from2 mycobacterium avium
72 | c2dxbR_ |
| not modelled | 46.3 | 31 | PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers
73 | c2d6fC_ |
| not modelled | 37.9 | 20 | PDB header:ligase/rna Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit e; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
74 | c3qyhG_ |
| not modelled | 35.3 | 18 | PDB header:lyase Chain: G: PDB Molecule:co-type nitrile hydratase alpha subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-h71l from2 pseudomonas putida.
75 | d1ujpa_ |
| not modelled | 34.5 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes
76 | c1m2oA_ |
| not modelled | 33.0 | 25 | PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex
77 | c1g8jC_ |
| not modelled | 31.9 | 26 | PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis
78 | c3ktwA_ |
| not modelled | 25.2 | 17 | PDB header:rna/rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: crystal structure of the srp19/s-domain srp rna complex of sulfolobus2 solfataricus
79 | d1brwa2 |
| not modelled | 24.0 | 12 | Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
80 | d1jida_ |
| not modelled | 23.4 | 13 | Fold:SRP19 Superfamily:SRP19 Family:SRP19
81 | d2phpa1 |
| not modelled | 22.9 | 18 | Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:Phosphomethylpyrimidine kinase C-terminal domain-like
82 | c3eg9B_ |
| not modelled | 22.7 | 25 | PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin
83 | d1djqa3 |
| not modelled | 22.5 | 45 | Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:N-terminal domain of adrenodoxin reductase-like
84 | d2nyga1 |
| not modelled | 22.3 | 14 | Fold:TTHA0583/YokD-like Superfamily:TTHA0583/YokD-like Family:Aminoglycoside 3-N-acetyltransferase-like
85 | d1a9xa1 |
| not modelled | 21.8 | 15 | Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain
86 | d1fxda_ |
| not modelled | 21.4 | 29 | Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin
87 | c3gxgA_ |
| not modelled | 20.6 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:putative phosphatase (duf442); PDBTitle: crystal structure of putative phosphatase (duf442) (yp_001181608.1)2 from shewanella putrefaciens cn-32 at 1.60 a resolution
88 | c2fugA_ |
| not modelled | 18.6 | 27 | PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
89 | d1uoua2 |
| not modelled | 17.2 | 10 | Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
90 | c3dluA_ |
| not modelled | 17.0 | 16 | PDB header:rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.
91 | c3fpnA_ |
| not modelled | 16.9 | 16 | PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains
92 | c3a5iB_ |
| not modelled | 16.6 | 14 | PDB header:protein transport Chain: B: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha
93 | c3c6fD_ |
| not modelled | 15.6 | 15 | PDB header:structural genomics, unknown function Chain: D: PDB Molecule:yetf protein; PDBTitle: crystal structure of protein bsu07140 from bacillus subtilis
94 | d1ddfa_ |
| not modelled | 15.5 | 18 | Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD
95 | c2wj8N_ |
| not modelled | 15.0 | 20 | PDB header:rna binding protein/rna Chain: N: PDB Molecule:nucleoprotein; PDBTitle: respiratory syncitial virus ribonucleoprotein
96 | c1z63A_ |
| not modelled | 14.9 | 10 | PDB header:hydrolase/dna complex Chain: A: PDB Molecule:helicase of the snf2/rad54 hamily; PDBTitle: sulfolobus solfataricus swi2/snf2 atpase core in complex2 with dsdna
97 | c2x49A_ |
| not modelled | 14.8 | 14 | PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva
98 | c1m2vB_ |
| not modelled | 14.5 | 26 | PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24; PDBTitle: crystal structure of the yeast sec23/24 heterodimer
99 | c1moxB_ |
| not modelled | 14.1 | 24 | PDB header:transferase/growth factor Chain: B: PDB Molecule:epidermal growth factor receptor; PDBTitle: crystal structure of human epidermal growth factor receptor (residues2 1-501) in complex with tgf-alpha

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0