52 c1ltxR_ Probab=99.60   E-value=4.9e-13  Score=99.03  Aligned_columns=350  Identities=12%

Q ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECC-CCCCCCCHHHHH---------------------------------
Q ss_conf             6220899998389999999999889809999677-313653614321---------------------------------
Q batch____         2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQ-DLACATSSASSK---------------------------------   47 (501)
Q Consensus         2 e~~DViIIGaGi~G~s~A~~La~~G~~V~liEk~-d~~~gaS~~ssg---------------------------------   47 (501)
                      ++|||+|||||++|+++|++|+++|++|+|+|++ .+|+.+++.+-.                                 
T Consensus         6 ~~~DVvVIGaG~aGL~aA~~La~~G~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (494)
T c1ltxR_           6 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAIPLSS   85 (494)
T ss_dssp             SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEEEBCS
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             43788999898889999999998798099996788997127998527704321463225654212222234420011332


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____        48 --------------------------------------------------------------------------------   47 (501)
Q Consensus        48 --------------------------------------------------------------------------------   47 (501)
                                                                                                      
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (494)
T c1ltxR_          86 KDKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQV  165 (494)
T ss_dssp             SCCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf             23333323311114655543122232110100233312134440148889764428565565564442102001402114


Q ss_pred             -HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHH
Q ss_conf             -1055446666553689999999999999876312100440264160244558999899999972021257735662956
Q batch____        48 -LIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFG  126 (501)
Q Consensus        48 -lih~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  126 (501)
                       .....+...........+...+....+..............-.....+.............-.............-...
T Consensus       166 p~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (494)
T c1ltxR_         166 PCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSTSCTVDGLK  245 (494)
T ss_dssp             CCSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHSSCCHHHHHHHHTTTSCCCCCBHHHHHH
T ss_pred             CCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             58967872165643034443456777752356675886432159688999883899999999999997514788247999


Q ss_pred             HHHHCCCCCCEEEEECCEEEC--CHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCEEEEEEEECCCCCEEEEEEEEEEE
Q ss_conf             543036545705840785983--548899999999977979996989887999599759998755678736788534887
Q batch____       127 ANSVLKPEIKRGFEYSDCWVD--DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVN  204 (501)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~v~--p~~~~~~l~~~a~~~G~~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~i~a~~VVn  204 (501)
                      ........+.......-....  -..+..++++.+.+.|+++.++++|+.|..+.+...+......+++.  +.|+.||.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~~~~~~~v~~~~g~~--~~a~~VI~  323 (494)
T c1ltxR_         246 ATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQR--IISKHFII  323 (494)
T ss_dssp             HHHHHHTTTTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEETTCCEEEEEEETTTCCEEEEEETTCCE--EECSEEEE
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEEEEEECCCCE--EEECEEEE
T ss_conf             9999999965306685588648878999999999740487088304226999838897699999379839--99078998


Q ss_pred             CCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEEE---------CCCCEEEEECCCCCC
Q ss_conf             38810478887403556677546640279994176677626986158987799984---------279859982364456
Q batch____       205 ATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIP---------WMDEFSIIGTTDVEY  275 (501)
Q Consensus       205 AaG~~a~~l~~~~~~~~~~~~i~p~kG~~~~l~~~~~~~~~~~~~~~~~~~~~~~p---------~~~g~~liG~t~~~~  275 (501)
                      ++..+..................-...................+....+.....+-         ..+..++..++....
T Consensus       324 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ap~g~~~l~~~~~~~~  403 (494)
T c1ltxR_         324 EDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLTCMSSK  403 (494)
T ss_dssp             EGGGBCTTTTSSCCCEEEEEEEEEESSCSSCCSSCCCEEEEEECCCSSSCCCEEEEEECGGGSSSCTTCEEEEEEEECSS
T ss_pred             CCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf             68403636431355553047999970234567776526999636355877718999813886748878579999981799


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCH
Q ss_conf             78833279998999999999986628777610032111221120378888754346650799738676574799833702
Q batch____       276 KGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKL  355 (501)
Q Consensus       276 ~~~~~~~~~~~~~i~~ll~~~~~~l~~~l~~~~v~~~~aGvRP~~~~~~~~~~~~~r~~~i~~~~~~~~~gl~~v~Gg~~  355 (501)
                      .        .+++++..++..-..+.+......+++...--.+..............++.+....-....++    -+-+
T Consensus       404 ~--------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~g~~~~~~~~----~~av  471 (494)
T c1ltxR_         404 T--------AREDLERVVQKLFTPYTEIEEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGN----DNAV  471 (494)
T ss_dssp             C--------HHHHHHHHHHHHCEECCSCCCCCEEEEEEEEEEEECCSCCGGGSSSCCTTEEEECCCCSSSSS----HHHH
T ss_pred             C--------CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCH----HHHH
T ss_conf             8--------089999999998641145554746998655512677765555443668888997788888998----8999


Q ss_pred             HHHHHHHHHH
Q ss_conf             3227999999
Q batch____       356 TTYRKLAEHA  365 (501)
Q Consensus       356 t~~r~~A~~~  365 (501)
                      .+++.++|++
T Consensus       472 ~sa~~~~e~i  481 (494)
T c1ltxR_         472 KQAETLFQQI  481 (494)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999997