Phyre 2 Results for P13035

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Email | l.a.kelley@imperial.ac.uk
Description | P13035
Date | Thu Jan 5 11:33:30 GMT 2012
Unique Job ID | 207abaac93364809

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c2r4jA_
Top template information
PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap
Confidence and coverage
Confidence: | 100.0% | Coverage: | 98%
493 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | E | T | K | D | L | I | V | I | G | G | G | I | N | G | A | G | I | A | A | D | A | A | G | R | G | L | S | V | L | M | L | E | A | Q | D | L | A | C | A | T | S | S | A | S | S | K | L | I | H | G | G | L | R | Y | L | E | H | Y | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | F | R | L | V | S | E | A | L | A | E | R | E | V | L | L | K | M | A | P | H | I | A | F | P | M | R | F | R | L | P | H | R | P | H | L | R | P | A | W | M | I | R | I | G | L | F | M | Y | D | H | L | G | K | R | T | S | L | P | G | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | T | G | L | R | F | G | A | N | S | V | L | K | P | E | I | K | R | G | F | E | Y | S | D | C | W | V | D | D | A | R | L | V | L | A | N | A | Q | M | V | V | R | K | G | G | E | V | L | T | R | T | R | A | T | S | A | R | R | E | N | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | L | W | I | V | E | A | E | D | I | D | T | G | K | K | Y | S | W | Q | A | R | G | L | V | N | A | T | G | P | W | V | K | Q | F | F | D | D | G | M | H | L | P | S | P | Y | G | I | R | L | I | K | G | S | H | I | V | V | P | R | V | H
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | T | Q | K | Q | A | Y | I | L | Q | N | E | D | K | R | I | V | F | V | I | P | W | M | D | E | F | S | I | I | G | T | T | D | V | E | Y | K | G | D | P | K | A | V | K | I | E | E | S | E | I | N | Y | L | L | N | V | Y | N | T | H | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | K | K | Q | L | S | R | D | D | I | V | W | T | Y | S | G | V | R | P | L | C | D | D | E | S | D | S | P | Q | A | I | T | R | D | Y | T | L | D | I | H | D | E | N | G | K | A | P | L | L | S | V | F | G | G | K | L | T | T | Y | R | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | L | A | E | H | A | L | E | K | L | T | P | Y | Y | Q | G | I | G | P | A | W | T | K | E | S | V | L | P | G | G | A | I | E | G | D | R | D | D | Y | A | A | R | L | R | R | R | Y | P | F | L | T | E | S | L | A | R | H | Y | A | R | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | Y | G | S | N | S | E | L | L | L | G | N | A | G | T | V | S | D | L | G | E | D | F | G | H | E | F | Y | E | A | E | L | K | Y | L | V | D | H | E | W | V | R | R | A | D | D | A | L | W | R | R | T | K | Q | G | M | W | L | N | A | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | .
Sequence |  | Q | Q | S | R | V | S | Q | W | L | V | E | Y | T | Q | Q | R | L | S | L | A | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2r4jA_ |

### PDB 2r4j chain A

Region: 1 - 493
Aligned: 493
Modelled: 493
Confidence: 100.0%
Identity: 99%
PDB header:oxidoreductase
Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase;
PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap

Phyre2
2 |
| c2rgoA_ |

### PDB 2rgo chain A

Region: 2 - 500
Aligned: 490
Modelled: 495
Confidence: 100.0%
Identity: 30%
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-glycerophosphate oxidase;
PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase

Phyre2
3 |
| c2rghA_ |

### PDB 2rgh chain A

Region: 2 - 500
Aligned: 480
Modelled: 498
Confidence: 100.0%
Identity: 30%
PDB header:oxidoreductase
Chain: A: PDB Molecule:alpha-glycerophosphate oxidase;
PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase

Phyre2
4 |
| c3da1A_ |

### PDB 3da1 chain A

Region: 2 - 500
Aligned: 445
Modelled: 462
Confidence: 100.0%
Identity: 31%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase;
PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167.

Phyre2
5 |
| c3dmeB_ |

### PDB 3dme chain B

Region: 3 - 369
Aligned: 356
Modelled: 365
Confidence: 100.0%
Identity: 19%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:conserved exported protein;
PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141

Phyre2
6 |
| c1pj6A_ |

### PDB 1pj6 chain A

Region: 2 - 371
Aligned: 347
Modelled: 366
Confidence: 100.0%
Identity: 15%
PDB header:oxidoreductase
Chain: A: PDB Molecule:n,n-dimethylglycine oxidase;
PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid

Phyre2
7 |
| c1y56B_ |

### PDB 1y56 chain B

Region: 2 - 390
Aligned: 367
Modelled: 378
Confidence: 100.0%
Identity: 14%
PDB header:oxidoreductase
Chain: B: PDB Molecule:sarcosine oxidase;
PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii

Phyre2
8 |
| c2gahB_ |

### PDB 2gah chain B

Region: 1 - 371
Aligned: 347
Modelled: 359
Confidence: 100.0%
Identity: 14%
PDB header:oxidoreductase
Chain: B: PDB Molecule:heterotetrameric sarcosine oxidase beta-subunit;
PDBTitle: heterotetrameric sarcosine: structure of a diflavin2 metaloenzyme at 1.85 a resolution

Phyre2
9 |
| c2olnA_ |

### PDB 2oln chain A

Region: 2 - 371
Aligned: 350
Modelled: 370
Confidence: 100.0%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:nikd protein;
PDBTitle: nikd, an unusual amino acid oxidase essential for2 nikkomycin biosynthesis: closed form at 1.15 a resolution

Phyre2
10 |
| c3ps9A_ |

### PDB 3ps9 chain A

Region: 3 - 369
Aligned: 349
Modelled: 367
Confidence: 100.0%
Identity: 13%
PDB header:transferase
Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis
PDBTitle: crystal structure of mnmc from e. coli

Phyre2
11 |
| c3nyeA_ |

### PDB 3nye chain A

Region: 2 - 369
Aligned: 344
Modelled: 357
Confidence: 100.0%
Identity: 17%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-arginine dehydrogenase;
PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine

Phyre2
12 |
| c3pvcA_ |

### PDB 3pvc chain A

Region: 2 - 370
Aligned: 350
Modelled: 362
Confidence: 100.0%
Identity: 15%
PDB header:oxidoreductase, transferase
Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis
PDBTitle: crystal structure of apo mnmc from yersinia pestis

Phyre2
13 |
| c3bhkA_ |

### PDB 3bhk chain A

Region: 3 - 371
Aligned: 346
Modelled: 366
Confidence: 100.0%
Identity: 14%
PDB header:oxidoreductase
Chain: A: PDB Molecule:monomeric sarcosine oxidase;
PDBTitle: crystal structure of r49k mutant of monomeric sarcosine oxidase2 crystallized in phosphate as precipitant

Phyre2
14 |
| c3djeA_ |

### PDB 3dje chain A

Region: 2 - 373
Aligned: 345
Modelled: 356
Confidence: 100.0%
Identity: 16%
PDB header:oxidoreductase
Chain: A: PDB Molecule:fructosyl amine: oxygen oxidoreductase;
PDBTitle: crystal structure of the deglycating enzyme fructosamine2 oxidase from aspergillus fumigatus (amadoriase ii) in3 complex with fsa

Phyre2
15 |
| c1ryiB_ |

### PDB 1ryi chain B

Region: 1 - 370
Aligned: 342
Modelled: 359
Confidence: 100.0%
Identity: 14%
PDB header:oxidoreductase
Chain: B: PDB Molecule:glycine oxidase;
PDBTitle: structure of glycine oxidase with bound inhibitor glycolate

Phyre2
16 |
| c1kifE_ |

### PDB 1kif chain E

Region: 6 - 377
Aligned: 326
Modelled: 355
Confidence: 100.0%
Identity: 15%
PDB header:flavoprotein
Chain: E: PDB Molecule:d-amino acid oxidase;
PDBTitle: d-amino acid oxidase from pig kidney

Phyre2
17 |
| c2uzzD_ |

### PDB 2uzz chain D

Region: 3 - 369
Aligned: 342
Modelled: 356
Confidence: 100.0%
Identity: 17%
PDB header:oxidoreductase
Chain: D: PDB Molecule:n-methyl-l-tryptophan oxidase;
PDBTitle: x-ray structure of n-methyl-l-tryptophan oxidase (mtox)

Phyre2
18 |
| c1c0iA_ |

### PDB 1c0i chain A

Region: 1 - 377
Aligned: 339
Modelled: 344
Confidence: 100.0%
Identity: 17%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-amino acid oxidase;
PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules

Phyre2
19 |
| d1pj5a2 |

### PDB 1pj5 chain A domain 2

Region: 3 - 324
Aligned: 300
Modelled: 322
Confidence: 99.9%
Identity: 15%
Fold: FAD/NAD(P)-binding domain
Superfamily: FAD/NAD(P)-binding domain
Family: FAD-linked reductases, N-terminal domain

Phyre2
20 |
| d1ryia1 |

### PDB 1ryi chain A domain 1

Region: 1 - 233
Aligned: 225
Modelled: 233
Confidence: 99.9%
Identity: 16%
Fold: FAD/NAD(P)-binding domain
Superfamily: FAD/NAD(P)-binding domain
Family: FAD-linked reductases, N-terminal domain

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2r4jA_ |
|  | 100.0 | 99 | PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap
2 | c2rgoA_ |
|  | 100.0 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
3 | c2rghA_ |
|  | 100.0 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
4 | c3da1A_ |
|  | 100.0 | 31 | PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167.
5 | c3dmeB_ |
|  | 100.0 | 19 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141
6 | c1pj6A_ |
|  | 100.0 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:n,n-dimethylglycine oxidase; PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid
7 | c1y56B_ |
|  | 100.0 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:sarcosine oxidase; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii
8 | c2gahB_ |
|  | 100.0 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:heterotetrameric sarcosine oxidase beta-subunit; PDBTitle: heterotetrameric sarcosine: structure of a diflavin2 metaloenzyme at 1.85 a resolution
9 | c2olnA_ |
|  | 100.0 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:nikd protein; PDBTitle: nikd, an unusual amino acid oxidase essential for2 nikkomycin biosynthesis: closed form at 1.15 a resolution
10 | c3ps9A_ |
|  | 100.0 | 13 | PDB header:transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of mnmc from e. coli
11 | c3nyeA_ |
|  | 100.0 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine
12 | c3pvcA_ |
|  | 100.0 | 15 | PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis
13 | c3bhkA_ |
|  | 100.0 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:monomeric sarcosine oxidase; PDBTitle: crystal structure of r49k mutant of monomeric sarcosine oxidase2 crystallized in phosphate as precipitant
14 | c3djeA_ |
|  | 100.0 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:fructosyl amine: oxygen oxidoreductase; PDBTitle: crystal structure of the deglycating enzyme fructosamine2 oxidase from aspergillus fumigatus (amadoriase ii) in3 complex with fsa
15 | c1ryiB_ |
|  | 100.0 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:glycine oxidase; PDBTitle: structure of glycine oxidase with bound inhibitor glycolate
16 | c1kifE_ |
|  | 100.0 | 15 | PDB header:flavoprotein Chain: E: PDB Molecule:d-amino acid oxidase; PDBTitle: d-amino acid oxidase from pig kidney
17 | c2uzzD_ |
|  | 100.0 | 17 | PDB header:oxidoreductase Chain: D: PDB Molecule:n-methyl-l-tryptophan oxidase; PDBTitle: x-ray structure of n-methyl-l-tryptophan oxidase (mtox)
18 | c1c0iA_ |
|  | 100.0 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules
19 | d1pj5a2 |
|  | 99.9 | 15 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
20 | d1ryia1 |
|  | 99.9 | 16 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
21 | d2gf3a1 |
| not modelled | 99.9 | 19 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
22 | c1x31A_ |
| not modelled | 99.9 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96
23 | d1c0pa1 |
| not modelled | 99.8 | 18 | Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:D-aminoacid oxidase, N-terminal domain
24 | c2aczA_ |
| not modelled | 99.8 | 16 | PDB header:oxidoreductase/electron transport Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with atpenin a52 inhibitor co-crystallized at the ubiquinone binding site
25 | c1yq4A_ |
| not modelled | 99.8 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: avian respiratory complex ii with 3-nitropropionate and ubiquinone
26 | d1kifa1 |
| not modelled | 99.8 | 19 | Fold:Nucleotide-binding domain Superfamily:Nucleotide-binding domain Family:D-aminoacid oxidase, N-terminal domain
27 | c1y56A_ |
| not modelled | 99.8 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein ph1363; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii
28 | d1neka2 |
| not modelled | 99.8 | 15 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
29 | c2bs3A_ |
| not modelled | 99.8 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:quinol-fumarate reductase flavoprotein subunit a; PDBTitle: glu c180 -> gln variant quinol:fumarate reductase from2 wolinella succinogenes
30 | c3atrA_ |
| not modelled | 99.8 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:conserved archaeal protein; PDBTitle: geranylgeranyl reductase (ggr) from sulfolobus acidocaldarius co-2 crystallized with its ligand
31 | c1jrxA_ |
| not modelled | 99.8 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c; PDBTitle: crystal structure of arg402ala mutant flavocytochrome c32 from shewanella frigidimarina
32 | c1qo8A_ |
| not modelled | 99.8 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c3 fumarate reductase; PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase
33 | c3ka7A_ |
| not modelled | 99.8 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of an oxidoreductase from methanosarcina2 mazei. northeast structural genomics consortium target id3 mar208
34 | d2bs2a2 |
| not modelled | 99.7 | 16 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
35 | c3p4rM_ |
| not modelled | 99.7 | 14 | PDB header:oxidoreductase Chain: M: PDB Molecule:fumarate reductase flavoprotein subunit; PDBTitle: crystal structure of menaquinol:fumarate oxidoreductase in complex2 with glutarate
36 | d1kf6a2 |
| not modelled | 99.7 | 11 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
37 | c1d4cB_ |
| not modelled | 99.7 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:flavocytochrome c fumarate reductase; PDBTitle: crystal structure of the uncomplexed form of the2 flavocytochrome c fumarate reductase of shewanella3 putrefaciens strain mr-1
38 | c3i3lA_ |
| not modelled | 99.7 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:alkylhalidase cmls; PDBTitle: crystal structure of cmls, a flavin-dependent halogenase
39 | c1kf6A_ |
| not modelled | 99.7 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:fumarate reductase flavoprotein; PDBTitle: e. coli quinol-fumarate reductase with bound inhibitor hqno
40 | d1y0pa2 |
| not modelled | 99.7 | 15 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
41 | d1qo8a2 |
| not modelled | 99.7 | 13 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
42 | c3e1tA_ |
| not modelled | 99.7 | 17 | PDB header:flavoprotein Chain: A: PDB Molecule:halogenase; PDBTitle: structure and action of the myxobacterial chondrochloren2 halogenase cndh, a new variant of fad-dependent halogenases
43 | c3nixF_ |
| not modelled | 99.7 | 16 | PDB header:oxidoreductase Chain: F: PDB Molecule:flavoprotein/dehydrogenase; PDBTitle: crystal structure of flavoprotein/dehydrogenase from cytophaga2 hutchinsonii. northeast structural genomics consortium target chr43.
44 | c2weuD_ |
| not modelled | 99.7 | 15 | PDB header:antifungal protein Chain: D: PDB Molecule:tryptophan 5-halogenase; PDBTitle: crystal structure of tryptophan 5-halogenase (pyrh) complex2 with substrate tryptophan
45 | c3i6dA_ |
| not modelled | 99.7 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:protoporphyrinogen oxidase; PDBTitle: crystal structure of ppo from bacillus subtilis with af
46 | d2gqfa1 |
| not modelled | 99.6 | 19 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:HI0933 N-terminal domain-like
47 | c3cgvA_ |
| not modelled | 99.6 | 16 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:geranylgeranyl reductase related protein; PDBTitle: crystal structure of geranylgeranyl bacteriochlorophyll reductase-like2 fixc homolog (np_393992.1) from thermoplasma acidophilum at 1.60 a3 resolution
48 | c2gmhA_ |
| not modelled | 99.6 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone
49 | d1d5ta1 |
| not modelled | 99.6 | 14 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GDI-like N domain
50 | c2ardA_ |
| not modelled | 99.6 | 10 | PDB header:biosynthetic protein Chain: A: PDB Molecule:tryptophan halogenase prna; PDBTitle: the structure of tryptophan 7-halogenase (prna) suggests a mechanism2 for regioselective chlorination
51 | c2zxiC_ |
| not modelled | 99.6 | 14 | PDB header:fad-binding protein Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: structure of aquifex aeolicus gida in the form ii crystal
52 | c1ltxR_ |
| not modelled | 99.6 | 12 | PDB header:transferase/protein binding Chain: R: PDB Molecule:rab escort protein 1; PDBTitle: structure of rab escort protein-1 in complex with rab2 geranylgeranyl transferase and isoprenoid
53 | c2eq8E_ |
| not modelled | 99.6 | 23 | PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase complex, dihydrolipoamide PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdp
54 | d1o5wa1 |
| not modelled | 99.6 | 18 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
55 | d1d4ca2 |
| not modelled | 99.6 | 14 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
56 | c2qa2A_ |
| not modelled | 99.6 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:polyketide oxygenase cabe; PDBTitle: crystal structure of cabe, an aromatic hydroxylase from angucycline2 biosynthesis, determined to 2.7 a resolution
57 | d2i0za1 |
| not modelled | 99.6 | 19 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:HI0933 N-terminal domain-like
58 | c3dgzA_ |
| not modelled | 99.6 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase 2; PDBTitle: crystal structure of mouse mitochondrial thioredoxin reductase, c-2 terminal 3-residue truncation
59 | c1zkqA_ |
| not modelled | 99.6 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase 2, mitochondrial; PDBTitle: crystal structure of mouse thioredoxin reductase type 2
60 | c3gyxA_ |
| not modelled | 99.6 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas
61 | c2e4gB_ |
| not modelled | 99.5 | 13 | PDB header:biosynthetic protein, flavoprotein Chain: B: PDB Molecule:tryptophan halogenase; PDBTitle: rebh with bound l-trp
62 | d2bcgg1 |
| not modelled | 99.5 | 14 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GDI-like N domain
63 | c2pyxA_ |
| not modelled | 99.5 | 14 | PDB header:biosynthetic protein Chain: A: PDB Molecule:tryptophan halogenase; PDBTitle: crystal structure of tryptophan halogenase (yp_750003.1) from2 shewanella frigidimarina ncimb 400 at 1.50 a resolution
64 | c2fjaC_ |
| not modelled | 99.5 | 16 | PDB header:oxidoreductase Chain: C: PDB Molecule:adenylylsulfate reductase, subunit a; PDBTitle: adenosine 5'-phosphosulfate reductase in complex with2 substrate
65 | c3g05B_ |
| not modelled | 99.5 | 18 | PDB header:rna binding protein Chain: B: PDB Molecule:trna uridine 5-carboxymethylaminomethyl modification enzyme PDBTitle: crystal structure of n-terminal domain (2-550) of e.coli mnmg
66 | c2dkhA_ |
| not modelled | 99.5 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas2 testosteroni, in complex with the substrate
67 | d3coxa1 |
| not modelled | 99.5 | 19 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
68 | c1bwcA_ |
| not modelled | 99.5 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein (glutathione reductase); PDBTitle: structure of human glutathione reductase complexed with ajoene2 inhibitor and subversive substrate
69 | c2nvkX_ |
| not modelled | 99.5 | 19 | PDB header:oxidoreductase Chain: X: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of thioredoxin reductase from drosophila2 melanogaster
70 | c3urhB_ |
| not modelled | 99.5 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoamide dehydrogenase from2 sinorhizobium meliloti 1021
71 | c3cesB_ |
| not modelled | 99.5 | 20 | PDB header:rna binding protein Chain: B: PDB Molecule:trna uridine 5-carboxymethylaminomethyl modification enzyme PDBTitle: crystal structure of e.coli mnmg (gida), a highly-conserved trna2 modifying enzyme
72 | d2gmha1 |
| not modelled | 99.5 | 19 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
73 | c1phhA_ |
| not modelled | 99.5 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:p-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of p-hydroxybenzoate hydroxylase complexed with its2 reaction product 3,4-dihydroxybenzoate
74 | c3fmwC_ |
| not modelled | 99.5 | 20 | PDB header:oxidoreductase Chain: C: PDB Molecule:oxygenase; PDBTitle: the crystal structure of mtmoiv, a baeyer-villiger2 monooxygenase from the mithramycin biosynthetic pathway in3 streptomyces argillaceus.
75 | c2c3dB_ |
| not modelled | 99.5 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxopropyl-com reductase; PDBTitle: 2.15 angstrom crystal structure of 2-ketopropyl coenzyme m2 oxidoreductase carboxylase with a coenzyme m disulfide3 bound at the active site
76 | c1v59B_ |
| not modelled | 99.5 | 17 | PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: crystal structure of yeast lipoamide dehydrogenase2 complexed with nad+
77 | d1k0ia1 |
| not modelled | 99.5 | 15 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
78 | c2ivdA_ |
| not modelled | 99.4 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:protoporphyrinogen oxidase; PDBTitle: structure of protoporphyrinogen oxidase from myxococcus2 xanthus with acifluorfen
79 | d1chua2 |
| not modelled | 99.4 | 23 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
80 | c3cp8C_ |
| not modelled | 99.4 | 18 | PDB header:oxidoreductase Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl PDBTitle: crystal structure of gida from chlorobium tepidum
81 | c3k7tB_ |
| not modelled | 99.4 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:6-hydroxy-l-nicotine oxidase; PDBTitle: crystal structure of apo-form 6-hydroxy-l-nicotine oxidase,2 crystal form p3121
82 | c2e5vA_ |
| not modelled | 99.4 | 11 | PDB header:oxidoreductase Chain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii
83 | c2gewA_ |
| not modelled | 99.4 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:cholesterol oxidase; PDBTitle: atomic resolution structure of cholesterol oxidase @ ph 9.02 (streptomyces sp. sa-coo)
84 | c1coyA_ |
| not modelled | 99.4 | 20 | PDB header:oxidoreductase(oxygen receptor) Chain: A: PDB Molecule:cholesterol oxidase; PDBTitle: crystal structure of cholesterol oxidase complexed with a2 steroid substrate. implications for fad dependent alcohol3 oxidases
85 | c1gndA_ |
| not modelled | 99.4 | 15 | PDB header:gtpase activation Chain: A: PDB Molecule:guanine nucleotide dissociation inhibitor; PDBTitle: guanine nucleotide dissociation inhibitor, alpha-isoform
86 | c2f5vA_ |
| not modelled | 99.4 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:pyranose 2-oxidase; PDBTitle: reaction geometry and thermostability mutant of pyranose 2-oxidase2 from the white-rot fungus peniophora sp.
87 | c1ebdB_ |
| not modelled | 99.4 | 17 | PDB header:complex (oxidoreductase/transferase) Chain: B: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase complexed with the binding2 domain of the dihydrolipoamide acetylase
88 | c3jskN_ |
| not modelled | 99.4 | 17 | PDB header:biosynthetic protein Chain: N: PDB Molecule:cypbp37 protein; PDBTitle: thiazole synthase from neurospora crassa
89 | c1zmcG_ |
| not modelled | 99.4 | 15 | PDB header:oxidoreductase Chain: G: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of human dihydrolipoamide dehydrogenase2 complexed to nad+
90 | c3v76A_ |
| not modelled | 99.4 | 18 | PDB header:flavoprotein Chain: A: PDB Molecule:flavoprotein; PDBTitle: the crystal structure of a flavoprotein from sinorhizobium meliloti
91 | c2igoG_ |
| not modelled | 99.4 | 13 | PDB header:oxidoreductase Chain: G: PDB Molecule:pyranose oxidase; PDBTitle: crystal structure of pyranose 2-oxidase h167a mutant with 2-2 fluoro-2-deoxy-d-glucose
92 | c1s3bB_ |
| not modelled | 99.4 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:amine oxidase [flavin-containing] b; PDBTitle: crystal structure of maob in complex with n-methyl-n-2 propargyl-1(r)-aminoindan
93 | c3cpiH_ |
| not modelled | 99.4 | 16 | PDB header:protein transport Chain: H: PDB Molecule:rab gdp-dissociation inhibitor; PDBTitle: crystal structure of yeast rab-gdi
94 | c2eq7B_ |
| not modelled | 99.4 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxoglutarate dehydrogenase e3 component; PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdo
95 | d1rp0a1 |
| not modelled | 99.4 | 15 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Thi4-like
96 | c3o0hA_ |
| not modelled | 99.4 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione reductase; PDBTitle: crystal structure of glutathione reductase from bartonella henselae
97 | c2a8xA_ |
| not modelled | 99.4 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of lipoamide dehydrogenase from2 mycobacterium tuberculosis
98 | c3ihgA_ |
| not modelled | 99.4 | 14 | PDB header:flavoprotein, oxidoreductase Chain: A: PDB Molecule:rdme; PDBTitle: crystal structure of a ternary complex of aklavinone-112 hydroxylase with fad and aklavinone
99 | c3nrnA_ |
| not modelled | 99.4 | 15 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pf1083; PDBTitle: crystal structure of pf1083 protein from pyrococcus furiosus,2 northeast structural genomics consortium target pfr223
100 | c2gqfA_ |
| not modelled | 99.4 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein hi0933; PDBTitle: crystal structure of flavoprotein hi0933 from haemophilus influenzae2 rd
101 | d1w4xa1 |
| not modelled | 99.4 | 16 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains
102 | c1geuA_ |
| not modelled | 99.4 | 19 | PDB header:oxidoreductase(flavoenzyme) Chain: A: PDB Molecule:glutathione reductase; PDBTitle: anatomy of an engineered nad-binding site
103 | c1dxlC_ |
| not modelled | 99.4 | 17 | PDB header:oxidoreductase Chain: C: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum
104 | c3nlcA_ |
| not modelled | 99.4 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein vp0956; PDBTitle: crystal structure of the vp0956 protein from vibrio parahaemolyticus.2 northeast structural genomics consortium target vpr147
105 | c1yvvB_ |
| not modelled | 99.4 | 12 | PDB header:oxidoreductase Chain: B: PDB Molecule:amine oxidase, flavin-containing; PDBTitle: x-ray structurure of p. syringae q888a4 oxidoreductase at2 resolution 2.5a. northeast structural genomics consortium3 target psr10.
106 | d1kdga1 |
| not modelled | 99.4 | 11 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
107 | c1lpfB_ |
| not modelled | 99.4 | 17 | PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: three-dimensional structure of lipoamide dehydrogenase from2 pseudomonas fluorescens at 2.8 angstroms resolution.3 analysis of redox and thermostability properties
108 | c1tytA_ |
| not modelled | 99.4 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:trypanothione reductase, oxidized form; PDBTitle: crystal and molecular structure of crithidia fasciculata2 trypanothione reductase at 2.6 angstroms resolution
109 | c2cfyB_ |
| not modelled | 99.4 | 17 | PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of human thioredoxin reductase 1
110 | c2hqmB_ |
| not modelled | 99.4 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione reductase; PDBTitle: crystal structure of glutathione reductase glr1 from the yeast2 saccharomyces cerevisiae
111 | d1n4wa1 |
| not modelled | 99.3 | 16 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
112 | c2w0hA_ |
| not modelled | 99.3 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:trypanothione reductase; PDBTitle: x ray structure of leishmania infantum trypanothione2 reductase in complex with antimony and nadph
113 | c2rgjA_ |
| not modelled | 99.3 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:flavin-containing monooxygenase; PDBTitle: crystal structure of flavin-containing monooxygenase phzs
114 | c2jbvA_ |
| not modelled | 99.3 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:choline oxidase; PDBTitle: crystal structure of choline oxidase reveals insights into2 the catalytic mechanism
115 | c3ic9D_ |
| not modelled | 99.3 | 13 | PDB header:oxidoreductase Chain: D: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: the structure of dihydrolipoamide dehydrogenase from colwellia2 psychrerythraea 34h.
116 | d1jnra2 |
| not modelled | 99.3 | 20 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
117 | c2i0zA_ |
| not modelled | 99.3 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:nad(fad)-utilizing dehydrogenases; PDBTitle: crystal structure of a fad binding protein from bacillus2 cereus, a putative nad(fad)-utilizing dehydrogenases
118 | c1zx9A_ |
| not modelled | 99.3 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:mercuric reductase; PDBTitle: crystal structure of tn501 mera
119 | c1naaB_ |
| not modelled | 99.3 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:cellobiose dehydrogenase; PDBTitle: cellobiose dehydrogenase flavoprotein fragment in complex with2 cellobionolactam
120 | d1vg0a1 |
| not modelled | 99.3 | 14 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GDI-like N domain

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0