14/01/2012 17:25:23 : INFO  : Run start: Sat Jan 14 17:25:23 GMT 2012
14/01/2012 17:25:28 : INFO  : Initialised job
14/01/2012 17:25:29 : INFO  : Renaming log file 'phyre2_20120114_172522.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/207abaac93364809/phyre_20120114_172522.log'
14/01/2012 17:25:30 : INFO  : Initialised job:
Sequence
>batch____
METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYE
FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS
TGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG
LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVH
TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHF
KKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRK
LAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYART
YGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNAD
QQSRVSQWLVEYTQQRLSLAS

14/01/2012 17:25:31 : INFO  : Checked sequence
14/01/2012 17:25:33 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 17:25:34 : INFO  : PSI-BLAST 3 iterations
14/01/2012 17:27:57 : INFO  : PSI-BLAST 5 iterations
14/01/2012 17:31:47 : INFO  : Finished PSI-BLAST
14/01/2012 17:31:48 : INFO  : Running Buildali to generate a3m file
14/01/2012 17:59:20 : INFO  : Converting to HMM
14/01/2012 17:59:33 : INFO  : Calibrating HMM
14/01/2012 17:59:52 : INFO  : Searching HMM database
14/01/2012 18:08:19 : INFO  : Finished buildali
14/01/2012 18:08:20 : INFO  : Predicting secondary structure
14/01/2012 18:08:28 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 18:08:29 : INFO  : Predicting Disordered regions
14/01/2012 18:08:33 : INFO  : Predicted Disorder (Disopred)
14/01/2012 18:08:35 : INFO  : Running memsat_svm check
14/01/2012 18:14:35 : INFO  : Running memsat_svm full
14/01/2012 18:25:59 : INFO  : Predicted Transmembrane (memsat_svm) ID '207abaac93364809'
14/01/2012 18:26:00 : INFO  : Initialising fold library search
14/01/2012 18:26:03 : INFO  : Initialised search input
14/01/2012 18:26:05 : INFO  : Building Ensemble models
14/01/2012 18:26:08 : INFO  : Building hh.c2r4jA_.model.1.pdb
14/01/2012 18:26:20 : INFO  : Building c2r4jA_.1.pdb
14/01/2012 18:26:29 : INFO  : Building c2rgoA_.2.pdb
14/01/2012 18:26:43 : INFO  : Building c2rghA_.3.pdb
14/01/2012 18:26:55 : INFO  : Building c3da1A_.4.pdb
14/01/2012 18:27:07 : INFO  : Building c3dmeB_.5.pdb
14/01/2012 18:27:17 : INFO  : Building c1pj6A_.6.pdb
14/01/2012 18:27:27 : INFO  : Building c1y56B_.7.pdb
14/01/2012 18:27:37 : INFO  : Building c2gahB_.8.pdb
14/01/2012 18:27:45 : INFO  : Building c2olnA_.9.pdb
14/01/2012 18:27:57 : INFO  : Building c3ps9A_.10.pdb
14/01/2012 18:28:06 : INFO  : Building c3nyeA_.11.pdb
14/01/2012 18:28:14 : INFO  : Building c3pvcA_.12.pdb
14/01/2012 18:28:24 : INFO  : Building c3bhkA_.13.pdb
14/01/2012 18:28:33 : INFO  : Building c3djeA_.14.pdb
14/01/2012 18:28:42 : INFO  : Building c1ryiB_.15.pdb
14/01/2012 18:28:51 : INFO  : Building c1kifE_.16.pdb
14/01/2012 18:28:59 : INFO  : Building c2uzzD_.17.pdb
14/01/2012 18:29:09 : INFO  : Building c1c0iA_.18.pdb
14/01/2012 18:29:18 : INFO  : Building d1pj5a2.19.pdb
14/01/2012 18:29:29 : INFO  : Building d1ryia1.20.pdb
14/01/2012 18:29:53 : INFO  : Finished HH model building
14/01/2012 18:29:54 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 18:30:42 : INFO  : html domain output complete ID '207abaac93364809'
14/01/2012 21:44:29 : INFO  : Run end  : Sat Jan 14 21:44:27 GMT 2012
