16/01/2012 03:58:56 : INFO  : Run start: Mon Jan 16 03:58:55 GMT 2012
16/01/2012 03:58:59 : INFO  : Initialised job
16/01/2012 03:59:00 : INFO  : Renaming log file 'phyre2_20120116_035855.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/phyre_20120116_035855.log'
16/01/2012 03:59:00 : INFO  : Initialised job:
Sequence
>batch____
MTVHHFTFHITDKSDASDIREVETRAFGFSKEADLVASLLEDESARPALSLLARYEGKAV
GHILFTRATFKGEMDSPLMHILAPLAVIPEYQGMGVGGRLIRTGIEHLRLMGCQTVFVLG
HATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMMQSLTAQPMTLTGHIRCADPDETGAL
T

16/01/2012 03:59:01 : INFO  : Checked sequence
16/01/2012 03:59:03 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 03:59:03 : INFO  : PSI-BLAST 3 iterations
16/01/2012 04:00:27 : INFO  : PSI-BLAST 5 iterations
16/01/2012 04:03:02 : INFO  : Finished PSI-BLAST
16/01/2012 04:03:05 : INFO  : Running Buildali to generate a3m file
16/01/2012 04:13:17 : INFO  : Converting to HMM
16/01/2012 04:13:19 : INFO  : Calibrating HMM
16/01/2012 04:13:30 : INFO  : Searching HMM database
16/01/2012 04:17:31 : INFO  : Finished buildali
16/01/2012 04:17:32 : INFO  : Predicting secondary structure
16/01/2012 04:17:40 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 04:17:41 : INFO  : Predicting Disordered regions
16/01/2012 04:17:45 : INFO  : Predicted Disorder (Disopred)
16/01/2012 04:17:46 : INFO  : Running memsat_svm check
16/01/2012 04:22:35 : INFO  : Running memsat_svm full
16/01/2012 04:28:48 : INFO  : Predicted Transmembrane (memsat_svm) ID '205900363437b7f3'
16/01/2012 04:28:50 : INFO  : Initialising fold library search
16/01/2012 04:28:53 : INFO  : Initialised search input
16/01/2012 04:28:55 : INFO  : Building Ensemble models
16/01/2012 04:28:58 : INFO  : Building hh.c2reeB_.model.1.pdb
16/01/2012 04:29:14 : INFO  : Building hh.c3r1kA_.model.2.pdb
16/01/2012 04:29:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/hh.c3r1kA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/c3r1kA_.1.pdb
16/01/2012 04:29:33 : INFO  : Building hh.c2ozgA_.model.3.pdb
16/01/2012 04:29:44 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/hh.c2ozgA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/c2ozgA_.2.pdb
16/01/2012 04:29:48 : INFO  : Building hh.d2ozga2.model.4.pdb
16/01/2012 04:29:59 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/hh.d2ozga2.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/d2ozga2.3.pdb
16/01/2012 04:30:03 : INFO  : Building hh.d2hv2a2.model.5.pdb
16/01/2012 04:30:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/hh.d2hv2a2.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/d2hv2a2.4.pdb
16/01/2012 04:30:17 : INFO  : Building hh.d2i00a2.model.6.pdb
16/01/2012 04:30:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/hh.d2i00a2.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/205900363437b7f3/d2i00a2.5.pdb
16/01/2012 04:30:33 : INFO  : Building c3r1kA_.1.pdb
16/01/2012 04:30:45 : INFO  : Building c2ozgA_.2.pdb
16/01/2012 04:30:58 : INFO  : Building d2ozga2.3.pdb
16/01/2012 04:31:12 : INFO  : Building d2hv2a2.4.pdb
16/01/2012 04:31:26 : INFO  : Building d2i00a2.5.pdb
16/01/2012 04:31:40 : INFO  : Building c2reeB_.6.pdb
16/01/2012 04:31:53 : INFO  : Building c2hv2D_.7.pdb
16/01/2012 04:32:06 : INFO  : Building c2i00D_.8.pdb
16/01/2012 04:32:20 : INFO  : Building c3n7zD_.9.pdb
16/01/2012 04:32:34 : INFO  : Building c3efaA_.10.pdb
16/01/2012 04:32:47 : INFO  : Building d1s3za_.11.pdb
16/01/2012 04:33:00 : INFO  : Building c2q0yA_.12.pdb
16/01/2012 04:33:13 : INFO  : Building c1ib1E_.13.pdb
16/01/2012 04:33:26 : INFO  : Building d1tiqa_.14.pdb
16/01/2012 04:33:39 : INFO  : Building d1m4ia_.15.pdb
16/01/2012 04:33:51 : INFO  : Building c2pswA_.16.pdb
16/01/2012 04:34:06 : INFO  : Building d1mk4a_.17.pdb
16/01/2012 04:34:20 : INFO  : Building c2cntD_.18.pdb
16/01/2012 04:34:34 : INFO  : Building c3blnA_.19.pdb
16/01/2012 04:34:47 : INFO  : Building d1n71a_.20.pdb
16/01/2012 04:36:24 : INFO  : Finished HH model building
16/01/2012 04:36:25 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 04:37:18 : INFO  : html domain output complete ID '205900363437b7f3'
16/01/2012 05:12:04 : INFO  : Run end  : Mon Jan 16 05:12:03 GMT 2012
