BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (452 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75908 Inner membrane protein ycdT n=43 Tax=Enterobacte... 927 0.0 UniRef50_D0YJ51 Diguanylate cyclase n=1 Tax=Klebsiella variicola... 324 3e-87 UniRef50_P76236 Inner membrane protein yeaI n=57 Tax=Enterobacte... 298 2e-79 UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter ... 262 2e-68 UniRef50_UPI0001C3436F predicted diguanylate cyclase n=1 Tax=Cit... 261 3e-68 UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 T... 246 9e-64 UniRef50_C1M4A3 Diguanylate cyclase n=1 Tax=Citrobacter sp. 30_2... 189 2e-46 UniRef50_UPI0001C34201 diguanylate cyclase n=1 Tax=Enterobacter ... 187 9e-46 UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 180 8e-44 UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 T... 160 8e-38 UniRef50_D0ZCJ5 Diguanylate cyclase n=1 Tax=Edwardsiella tarda E... 155 4e-36 UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus... 138 4e-31 UniRef50_A6CY69 Putative GGDEF family protein n=1 Tax=Vibrio shi... 137 6e-31 UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coah... 137 6e-31 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 137 8e-31 UniRef50_C6HUY5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 137 9e-31 UniRef50_C7R6L5 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 136 2e-30 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 135 3e-30 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 135 3e-30 UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 135 4e-30 UniRef50_A6LR61 Diguanylate cyclase n=3 Tax=Clostridium RepID=A6... 135 5e-30 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 134 8e-30 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 133 1e-29 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 132 4e-29 UniRef50_A1SVT3 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 131 6e-29 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 131 7e-29 UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense R... 130 7e-29 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 130 8e-29 UniRef50_D1B2B4 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 130 8e-29 UniRef50_B9LA95 Diguanylate cyclase n=1 Tax=Nautilia profundicol... 130 9e-29 UniRef50_A0LU23 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 130 9e-29 UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and heme... 130 9e-29 UniRef50_A8IQ43 Putative diguanylate cyclase (DGC) n=1 Tax=Azorh... 130 1e-28 UniRef50_A9C2G6 Diguanylate cyclase n=2 Tax=cellular organisms R... 129 2e-28 UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneum... 129 2e-28 UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 129 3e-28 UniRef50_D0J0D0 Diguanylate cyclase n=2 Tax=Comamonas testostero... 129 3e-28 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 129 3e-28 UniRef50_Q30SN7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 128 4e-28 UniRef50_Q1GEL0 Response regulator receiver modulated diguanylat... 128 4e-28 UniRef50_A7HJQ0 Diguanylate cyclase n=2 Tax=cellular organisms R... 128 4e-28 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 128 6e-28 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 127 7e-28 UniRef50_Q2SP63 Response regulator containing a CheY-like receiv... 127 9e-28 UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geoba... 127 9e-28 UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoa... 127 9e-28 UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curviba... 127 9e-28 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 127 9e-28 UniRef50_C6C017 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 127 1e-27 UniRef50_Q30XX0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desul... 127 1e-27 UniRef50_C9RK09 Diguanylate cyclase n=1 Tax=Fibrobacter succinog... 127 1e-27 UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepI... 127 1e-27 UniRef50_Q47WJ9 GGDEF domain protein n=1 Tax=Colwellia psychrery... 127 1e-27 UniRef50_A6DA98 Diguanylate cyclase n=1 Tax=Caminibacter mediatl... 127 1e-27 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 126 1e-27 UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing pr... 126 1e-27 UniRef50_B6BHU7 Diguanylate cyclase n=1 Tax=Campylobacterales ba... 126 1e-27 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 126 1e-27 UniRef50_D0SFS0 GGDEF family protein (Fragment) n=1 Tax=Acinetob... 126 1e-27 UniRef50_C6D6R5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 126 2e-27 UniRef50_B6BJ09 Two-component response regulator n=2 Tax=Campylo... 126 2e-27 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 125 2e-27 UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 125 2e-27 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 125 2e-27 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 125 3e-27 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 125 3e-27 UniRef50_A1S9Y5 Diguanylate cyclase n=1 Tax=Shewanella amazonens... 125 3e-27 UniRef50_Q2C9S2 Two component diguanylate cyclase n=1 Tax=Oceani... 125 3e-27 UniRef50_B6BGH7 GGDEF domain/pas/pac sensor domain protein n=1 T... 125 3e-27 UniRef50_B9L7B8 Ggdef domain protein n=1 Tax=Nautilia profundico... 125 3e-27 UniRef50_D0SE10 Diguanylate cyclase n=1 Tax=Acinetobacter johnso... 125 3e-27 UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 125 4e-27 UniRef50_C1TN20 Periplasmic/7TM domain sensor diguanylate cyclas... 125 4e-27 UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Pers... 125 4e-27 UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitrati... 125 4e-27 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 125 4e-27 UniRef50_B7RWX6 GGDEF domain protein n=1 Tax=marine gamma proteo... 125 4e-27 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 124 6e-27 UniRef50_C1YQA6 Diguanylate cyclase (GGDEF) domain-containing pr... 124 7e-27 UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermoce... 124 7e-27 UniRef50_Q7CYR0 GGDEF family protein n=4 Tax=Rhizobium/Agrobacte... 124 8e-27 UniRef50_Q2SHG3 Response regulator containing a CheY-like receiv... 124 8e-27 UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 124 8e-27 UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W... 124 8e-27 UniRef50_A8MEQ5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 124 8e-27 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 124 9e-27 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 124 9e-27 UniRef50_B3E6Q3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ge... 123 1e-26 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 123 1e-26 UniRef50_B2V6C7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Su... 123 1e-26 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 123 1e-26 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 123 1e-26 UniRef50_B3PE85 Putative membrane protein n=1 Tax=Cellvibrio jap... 123 1e-26 UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoa... 123 1e-26 UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 123 1e-26 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 123 1e-26 UniRef50_A4XZM4 Diguanylate cyclase n=1 Tax=Pseudomonas mendocin... 123 2e-26 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 122 2e-26 UniRef50_A0L7Q0 Response regulator receiver modulated diguanylat... 122 2e-26 UniRef50_Q2BQS0 GGDEF family protein n=1 Tax=Neptuniibacter caes... 122 2e-26 UniRef50_P54595 Uncharacterized protein yhcK n=2 Tax=Bacillus su... 122 2e-26 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 122 2e-26 UniRef50_C5SB80 Diguanylate cyclase n=1 Tax=Allochromatium vinos... 122 2e-26 UniRef50_Q56569 Vibrio anguillarum virC n=1 Tax=Listonella angui... 122 2e-26 UniRef50_B9R0D3 GGDEF domain protein n=1 Tax=Labrenzia alexandri... 122 3e-26 UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobact... 122 3e-26 UniRef50_B6BJE3 GGDEF domain protein n=1 Tax=Campylobacterales b... 122 3e-26 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 122 3e-26 UniRef50_A0Y2V2 GGDEF family protein n=3 Tax=Alteromonadales Rep... 122 3e-26 UniRef50_A7INP4 Diguanylate cyclase n=1 Tax=Xanthobacter autotro... 122 3e-26 UniRef50_B4U5Q5 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp.... 122 3e-26 UniRef50_Q2YBC6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitro... 122 3e-26 UniRef50_B0SEM7 GGDEF domain protein n=2 Tax=Leptospira biflexa ... 122 3e-26 UniRef50_C6BSH8 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 122 3e-26 UniRef50_UPI0001AEBF6C diguanylate cyclase n=1 Tax=Alteromonas m... 122 4e-26 UniRef50_A6DBG2 Diguanylate cyclase (GGDEF domain) n=1 Tax=Camin... 122 4e-26 UniRef50_A1K8W1 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 R... 122 4e-26 UniRef50_B5JAC0 GGDEF domain protein n=2 Tax=Octadecabacter anta... 122 4e-26 UniRef50_B8FL29 Response regulator receiver modulated diguanylat... 122 4e-26 UniRef50_B4SMP5 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 122 4e-26 UniRef50_A6LYL1 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 122 4e-26 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 122 4e-26 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 122 4e-26 UniRef50_A6Q5K7 Signal transduction response regulator n=1 Tax=N... 121 4e-26 UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=P... 121 4e-26 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 121 5e-26 UniRef50_A0L200 Diguanylate cyclase n=2 Tax=Shewanella RepID=A0L... 121 5e-26 UniRef50_A4B9Y3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Reine... 121 5e-26 UniRef50_A0NVH7 Sensory box/GGDEF domain/EAL domain protein n=1 ... 121 5e-26 UniRef50_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicau... 121 5e-26 UniRef50_Q2W9E2 Predicted signal transduction protein n=2 Tax=Ma... 121 5e-26 UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Rals... 121 5e-26 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 121 5e-26 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 121 5e-26 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 121 5e-26 UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 121 6e-26 UniRef50_Q1RHW0 Regulatory components of sensory transduction sy... 121 6e-26 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 121 6e-26 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 121 6e-26 UniRef50_A3QDK0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 121 7e-26 UniRef50_C7RBD9 Response regulator receiver modulated diguanylat... 121 7e-26 UniRef50_B4U7Y9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hy... 121 7e-26 UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 120 7e-26 UniRef50_B8GM76 Response regulator receiver protein n=1 Tax=Thio... 120 7e-26 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 120 8e-26 UniRef50_Q47WC7 GGDEF domain protein n=1 Tax=Colwellia psychrery... 120 8e-26 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 120 8e-26 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 120 8e-26 UniRef50_A6VRQ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 9e-26 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 120 9e-26 UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuni... 120 9e-26 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 120 9e-26 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 120 9e-26 UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 120 1e-25 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 120 1e-25 UniRef50_C5S6C0 Response regulator receiver modulated diguanylat... 120 1e-25 UniRef50_Q1D565 FHA domain/GGDEF domain protein n=1 Tax=Myxococc... 120 1e-25 UniRef50_A6CP72 Adenylate/guanylate cyclase n=1 Tax=Bacillus sp.... 120 1e-25 UniRef50_B6BKZ4 Sensory box/ggdef family protein n=1 Tax=Campylo... 120 1e-25 UniRef50_Q47IV4 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=... 120 1e-25 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 120 1e-25 UniRef50_A4SJ18 GGDEF domain protein n=3 Tax=Aeromonas RepID=A4S... 120 1e-25 UniRef50_C8SJ15 Diguanylate cyclase n=2 Tax=Mesorhizobium RepID=... 120 1e-25 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 120 1e-25 UniRef50_Q0AG42 Diguanylate cyclase n=2 Tax=Nitrosomonas RepID=Q... 120 1e-25 UniRef50_D1B1W8 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 120 1e-25 UniRef50_Q2BPL4 Signal transduction histidine kinase n=1 Tax=Nep... 120 1e-25 UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 120 1e-25 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 120 2e-25 UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium... 119 2e-25 UniRef50_A8VWB4 Response regulator receiver protein n=1 Tax=Baci... 119 2e-25 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 119 2e-25 UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain... 119 2e-25 UniRef50_Q1N653 Putative uncharacterized protein n=1 Tax=Bermane... 119 2e-25 UniRef50_C6HZU4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 119 2e-25 UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D... 119 2e-25 UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 119 2e-25 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 119 2e-25 UniRef50_Q0F2V6 GGDEF domain protein n=2 Tax=Proteobacteria RepI... 119 2e-25 UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus... 119 2e-25 UniRef50_Q1ZN19 Putative uncharacterized protein n=3 Tax=Photoba... 119 2e-25 UniRef50_Q07X09 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 119 2e-25 UniRef50_B6A0D1 Diguanylate cyclase n=2 Tax=Rhizobiaceae RepID=B... 119 2e-25 UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliil... 119 2e-25 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 119 2e-25 UniRef50_A4A8T9 GGDEF domain protein n=1 Tax=Congregibacter lito... 119 2e-25 UniRef50_B9JME5 Sensory box/GGDEF family protein n=3 Tax=Rhizobi... 119 2e-25 UniRef50_B1I0Y3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 119 2e-25 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 119 2e-25 UniRef50_A3VUD9 Putative uncharacterized protein n=1 Tax=Parvula... 119 2e-25 UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellu... 119 2e-25 UniRef50_D2YPC6 GGDEF family protein n=1 Tax=Vibrio mimicus VM57... 119 2e-25 UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas... 119 2e-25 UniRef50_A6LZP4 Diguanylate cyclase n=1 Tax=Clostridium beijerin... 119 2e-25 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 119 2e-25 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 119 3e-25 UniRef50_A9D366 GGDEF family protein n=1 Tax=Shewanella benthica... 119 3e-25 UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibiu... 119 3e-25 UniRef50_B8DNJ7 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgar... 119 3e-25 UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobiu... 119 3e-25 UniRef50_D2BVZ5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech... 119 3e-25 UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=S... 119 3e-25 UniRef50_Q0ATH2 Response regulator receiver modulated diguanylat... 119 3e-25 UniRef50_A0KY43 Diguanylate cyclase n=3 Tax=Shewanella RepID=A0K... 119 3e-25 UniRef50_Q0VMN2 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q... 119 3e-25 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 119 3e-25 UniRef50_B9L5N3 Ggdef domain protein n=1 Tax=Nautilia profundico... 119 3e-25 UniRef50_Q21I36 Response regulator receiver modulated diguanylat... 119 3e-25 UniRef50_C0QJ78 Signal transduction family protein (GGDEF domain... 119 3e-25 UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain prote... 119 3e-25 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 119 3e-25 UniRef50_C7DA12 Response regulator receiver modulated diguanylat... 119 3e-25 UniRef50_A9FJ67 FHA and GGDEF domain protein n=1 Tax=Sorangium c... 118 3e-25 UniRef50_A8G0E2 Diguanylate cyclase n=1 Tax=Shewanella sediminis... 118 3e-25 UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium ext... 118 4e-25 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 118 4e-25 UniRef50_A9D3L2 Putative uncharacterized protein n=1 Tax=Hoeflea... 118 4e-25 UniRef50_C6DKF8 Diguanylate cyclase n=5 Tax=Pectobacterium RepID... 118 4e-25 UniRef50_A5PEH1 Putative diguanylate cyclase (GGDEF) n=1 Tax=Ery... 118 4e-25 UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix oren... 118 4e-25 UniRef50_C6HZZ1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 118 4e-25 UniRef50_B5SJ67 Signal transduction protein ggdef domain n=4 Tax... 118 4e-25 UniRef50_D2MBX0 Diguanylate cyclase n=1 Tax=Rhodopseudomonas pal... 118 4e-25 UniRef50_A6W207 Diguanylate cyclase n=2 Tax=Marinomonas sp. MWYL... 118 4e-25 UniRef50_A6Q2U9 Signal transduction response regulator n=1 Tax=N... 118 4e-25 UniRef50_C9NTP3 GGDEF domain protein n=1 Tax=Vibrio coralliilyti... 118 4e-25 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 118 5e-25 UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphoh... 118 5e-25 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 118 5e-25 UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobact... 118 5e-25 UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8... 118 5e-25 UniRef50_A6Q428 Signal transduction response regulator n=1 Tax=N... 118 5e-25 UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 T... 118 5e-25 UniRef50_Q5LPU6 Diguanylate cyclase, putative/response regulator... 118 5e-25 UniRef50_Q8D5H8 FOG: GGDEF domain n=2 Tax=Vibrio vulnificus RepI... 118 5e-25 UniRef50_B8CTE8 GGDEF domain protein n=1 Tax=Shewanella piezotol... 118 5e-25 UniRef50_A8LJ58 Response regulator n=1 Tax=Dinoroseobacter shiba... 118 5e-25 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 118 5e-25 UniRef50_Q47MR9 GGDEF n=2 Tax=Streptosporangineae RepID=Q47MR9_T... 118 6e-25 UniRef50_A3WVM8 Putative uncharacterized protein n=1 Tax=Nitroba... 118 6e-25 UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrery... 118 6e-25 UniRef50_Q1JXC4 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 117 6e-25 UniRef50_Q3A5K1 Two component signal transduction response regul... 117 6e-25 UniRef50_C6V500 Response regulator/GGDEF domain protein PleD n=2... 117 6e-25 UniRef50_C7I2H1 Diguanylate cyclase n=1 Tax=Thiomonas intermedia... 117 6e-25 UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterinea... 117 6e-25 UniRef50_A8EST0 GGDEF/PAS domain protein n=1 Tax=Arcobacter butz... 117 7e-25 UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 117 7e-25 UniRef50_C6RRW8 Diguanylate cyclase n=6 Tax=Acinetobacter radior... 117 7e-25 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 117 7e-25 >UniRef50_P75908 Inner membrane protein ycdT n=43 Tax=Enterobacteriaceae RepID=YCDT_ECOLI Length = 452 Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/452 (100%), Positives = 452/452 (100%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF Sbjct: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ Sbjct: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA Sbjct: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF Sbjct: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL Sbjct: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG Sbjct: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE Sbjct: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 Query: 421 IYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 IYRLADNALYEAKETGRNKVVVRDVVNFCESP Sbjct: 421 IYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 >UniRef50_D0YJ51 Diguanylate cyclase n=1 Tax=Klebsiella variicola At-22 RepID=D0YJ51_KLEVA Length = 452 Score = 324 bits (831), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 171/449 (38%), Positives = 266/449 (59%), Gaps = 10/449 (2%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 ME Y +++ V + ++ L L+ N+ E +P S+YL+++IALFFI+ AF+F Sbjct: 9 MEMKY-KLNPVVSLVIVISLFLIASNTIIYMEVNEMNIPLSSYLIIVIALFFINITAFMF 67 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 +Q+ ++ +R +FS VLSL F CL+YF T+IIIQ+ + + L + ND AI+YLFRQ Sbjct: 68 LQMDYMSNRIEFSKFVLSLTFFGCLVYFAETIIIIQKPVNDALELQIKANDTAIFYLFRQ 127 Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 MS IL+ LA+ + E ++ N K + LF F PIVAH LSSH +Y + Sbjct: 128 MSFIILLILAIYSYKLEQSQTLNGCKKIKIMVYCLFPTFIMPIVAHNLSSHNATYTFMLT 187 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYF----NGLRYDIWNGVTVIAFCAVLYNI 236 + + + +W Y+ +I +W S+ YF L DIWNG+ VI A++YN Sbjct: 188 NYLSGDKKAIWNIQYINALIILW----SLTSYFIVKVTKLSSDIWNGMLVICLSAIMYNT 243 Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF 296 LL + +Y++S WY+SR IEV+SKL V+ M +F L++ ++A RDP+TNI NR +F Sbjct: 244 FLLLLDKYNLSIWYLSRAIEVLSKLFVIGTLMNCVFVKLKIANHLAIRDPMTNIHNRRFF 303 Query: 297 FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356 F L S + CVM++D+D FK +NDTWGHP GD + VV+IIG+ I P+D+ A Sbjct: 304 FTRLEEMLKSTCQN-ICVMVIDLDDFKSINDTWGHPTGDSTLLAVVDIIGQYIGPNDIFA 362 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R+GGEEFG+++ + A + +R NV+ T +Y IP+ +T+S+G + Sbjct: 363 RIGGEEFGIIVKKSSLKDAIEFSNMLRNNVKIGTARGNKYNIPRTITLSVGGTLLTSGTY 422 Query: 417 NPNEIYRLADNALYEAKETGRNKVVVRDV 445 + ++ + ADNALY K G++ ++ ++ Sbjct: 423 SVGDVIKSADNALYSVKNNGKDGIMFAEM 451 >UniRef50_P76236 Inner membrane protein yeaI n=57 Tax=Enterobacteriaceae RepID=YEAI_ECOLI Length = 491 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 168/449 (37%), Positives = 274/449 (61%), Gaps = 9/449 (2%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 M L+ S + SLL L L + + +N+ +++P+ YLMV++ALFF++ V F+F Sbjct: 48 MGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLF 107 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 M + + +++ +LSLAFLS LIY V T++II + I ND++I+Y+FRQ Sbjct: 108 MLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQ 167 Query: 121 MSLCILIFLALV----NKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYN 176 +S L LAL + + +N K++ + + L + F VF P++AH LSS+ Y+ Sbjct: 168 LSFICLTSLALFCYGKDNILDNNKKK---TGILLLALIPFLVF--PLLAHNLSSYNADYS 222 Query: 177 LHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNI 236 L++ + +N W +Y I++ +W LL + L ++W + ++ ++ N+ Sbjct: 223 LYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNL 282 Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF 296 LL + Y+ + WYISR IEV SKL V+ + +IF L+++ +A D LTNI+NR YF Sbjct: 283 LLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYF 342 Query: 297 FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356 FN + + +CVM++DI+ FK++N WGH VGD+V+ ++V+II +SIRPDD+LA Sbjct: 343 FNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILA 402 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R+ GE FG+L T++++ +AK +AER+R+NVE LTG + Y +P+++TISIG V + + Sbjct: 403 RLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTR 462 Query: 417 NPNEIYRLADNALYEAKETGRNKVVVRDV 445 N + + AD AL EAK G NKV++ + Sbjct: 463 NISLVMTEADKALREAKSEGGNKVIIHHI 491 >UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter sp. 30_2 RepID=C1M322_9ENTR Length = 473 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 151/409 (36%), Positives = 239/409 (58%), Gaps = 11/409 (2%) Query: 36 EVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIII 95 + VP++ YL++++ LFF+ + F+FM ++ + +L +AFL I+F+ T+ I+ Sbjct: 67 QSVPQTVYLIIIVGLFFLYGIIFLFMLFQYLCRKDLTCLMILGMAFLGNNIFFIETIYIV 126 Query: 96 QQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVN-KVSEN---TKQRNLFSKKMTL 151 Q +I + + NDIAI+Y FRQ+S L+F++L + KVS TK+R + + Sbjct: 127 QDLINDYASIEKRTNDIAIFYYFRQISFIALLFVSLKSYKVSSTVIETKER----EPCYI 182 Query: 152 CISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNL 211 +S + +VAH L+S+ ++ L I L +N V W Y+ +I W +L + Sbjct: 183 VLSFLIMLVIAVVAHALASYNPNFTLEITSLKPDNVTVHWHIGYIYSLIVSWGLVLLYLI 242 Query: 212 YFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHI 271 +W + ++ A+L N+ LL + YS+ WY+SR IEV+S L ++ I M + Sbjct: 243 IKTRTHNILWKSIGLLCCSAILTNVLLLSLDEYSMYIWYVSRGIEVISALCIISILMYNT 302 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGH 331 F L+ + A +D +T I+NR F+ L +S K CVM++DID FK++NDT+GH Sbjct: 303 FIILKKETDSAIKDAMTKIYNRKLFYKSL---KSSLAKGTVCVMVLDIDKFKRINDTYGH 359 Query: 332 PVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTG 391 GD+VI ++V+I+ KSIR D+ ARVGGEEF +LL D + A +AERIR NVE T Sbjct: 360 QEGDRVIISIVDIVNKSIRDTDIFARVGGEEFAILLKCNDKDEAIVVAERIRRNVENGTT 419 Query: 392 DNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 Y + +K+TISIG ++ + + +++ AD ALYEAK +GRNKV Sbjct: 420 IPNSYNLKEKMTISIGVYCSKIDDESADKVVSYADAALYEAKNSGRNKV 468 >UniRef50_UPI0001C3436F predicted diguanylate cyclase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C3436F Length = 443 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 146/405 (36%), Positives = 230/405 (56%), Gaps = 3/405 (0%) Query: 36 EVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIII 95 + VP++ YL++++ LFF+ + F+FM ++ + +L +AFLS I+FV T+ I+ Sbjct: 37 QSVPQTIYLIIIVGLFFLYGIIFLFMLFQYLCRKDLTCLMILGMAFLSNNIFFVETIYIV 96 Query: 96 QQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISL 155 Q +I + + NDIAI+Y FRQ+S L+F+ L + + +T + + ++ Sbjct: 97 QDLINDHTSIEKRTNDIAIFYYFRQLSFIALLFVCLKSYKTSSTIIETKEREPCYIAVAF 156 Query: 156 FFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNG 215 F + ++AH L+S+ L I L +N V W Y+ +I W +L + Sbjct: 157 FIMLAIAVLAHSLASYNPGMTLEITSLKPDNVTVHWHIGYIYSLIVAWGLVLLYLVIKTK 216 Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 +W + ++ +L N+ LL + YS+ WYISR IEV+S L ++ I M + F L Sbjct: 217 THNILWKSIGLLCCSGILTNVLLLSLDEYSMYIWYISRGIEVISTLCIISILMYNTFIIL 276 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + + A +D +T I+NR F+ L AS K CVM++DID FK++NDT+GH GD Sbjct: 277 KKETDSAIKDAMTKIYNRKLFYRTL---KASLTKGAVCVMVLDIDKFKRINDTYGHQEGD 333 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 +VI ++V+II SIR D+ AR+GGEEF +LL D + A +AERIR NVE T Sbjct: 334 RVIISIVDIINNSIRDTDIFARIGGEEFAILLKCKDKDEAIVVAERIRRNVENGTTLPNA 393 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 Y + +K+TISIG + + +++ AD ALY+AK +GRNKV Sbjct: 394 YDLKEKMTISIGVYCSNATDESADKVVSYADAALYDAKNSGRNKV 438 >UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Escherichia coli RepID=A7ZJI1_ECO24 Length = 443 Score = 246 bits (629), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 151/408 (37%), Positives = 235/408 (57%), Gaps = 12/408 (2%) Query: 42 TYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEE 101 +Y + +I LFFI+ + FIF+ LY++ ++RQ +LS AFLS Y + II + Sbjct: 42 SYSVFIIGLFFINLMIFIFLLLYYVSNQRQSYLLILSFAFLSNTYYLLEVAIISLSPLGN 101 Query: 102 RLTSSVVQ--NDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKK---MTLCISLF 156 L S++ Q NDIAIYYLFRQ S +IFLA+ S N K +++ K + + +S+ Sbjct: 102 DL-STIYQKSNDIAIYYLFRQFSFISIIFLAVY---STNVKNKSVLEDKRNIIIVVLSIL 157 Query: 157 FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGL 216 +F P VA LSS Y+L+I + + W Y I+ WL LL + Sbjct: 158 ILFITPYVAKNLSSDNIKYSLNIIQYSLNRHLPTWNIVYTKIISVFWLVLLISSCISIRN 217 Query: 217 RYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR 276 IW + +I+ +V N+ LL+ S WY+++ +E++S + ++ M ++F L Sbjct: 218 YSKIWLCIILISIVSVCNNLILLYFIDKSHPAWYMTKFLELISMIYIISTLMYYVFRKLN 277 Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 ++A DPLTN +NR YF + L ++ + V+++DID FK +ND WGH +GDQ Sbjct: 278 HANHMAIHDPLTNTYNRRYFIDSL---KNISKHHDFSVIMLDIDSFKSINDKWGHHMGDQ 334 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 VI V II KSIR +D+L R+GGEEFG+++ + ++AERIR+N+E + Sbjct: 335 VIVMVTRIIKKSIRKEDILGRLGGEEFGIIIKGNTQKLLLSIAERIRKNIEEQCSEKLLS 394 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 P+K+T+SIG ++EN L+P+E+ AD ALY+AK TG+NKV++ Sbjct: 395 HGPEKITVSIGCFTSKENNLSPSEMLVNADKALYQAKRTGKNKVIIHS 442 >UniRef50_C1M4A3 Diguanylate cyclase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4A3_9ENTR Length = 449 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 118/400 (29%), Positives = 202/400 (50%), Gaps = 20/400 (5%) Query: 53 IDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYF--VITVIIIQQIIEERLTSSVVQN 110 I T F+ M Y Y R+++ L L+C YF V + + + V+ N Sbjct: 54 IQTGCFMTMN-YMSYRRKKY------LLPLACAFYFSGVFLFLALYIYFYKNGLPGVIYN 106 Query: 111 DIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSS 170 DIA+ Y R M + L F +N K+++ K + + + ++A + S Sbjct: 107 DIAVLYFMRNMLITGLFFATYYLYTFKNKKEKH---GKTVIYATYLWCMLHLVMAILYSI 163 Query: 171 HYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFC 230 + + + W+ S++ ++I +W ++ + L+ W ++++A Sbjct: 164 RITPISFQLVDTETFEWLRPWRGSFIYVLIILWTCIVLLGAKLTRLKTQFWVSMSLVALS 223 Query: 231 AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAH------- 283 +L I +L + + WY++R +E +S + VM++ M IF + ++ Sbjct: 224 NLLSVIIMLKYTHIDSAGWYLARGLECLSAMAVMIVLMSDIFKRYKASRQAYELSYENSV 283 Query: 284 RDPLTNIFNRNYFFNELTVQ-SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 RDP+T +FNR YF+N L+ + +A P ++ DID FK VNDTWGH GD+VI + Sbjct: 284 RDPMTRLFNRGYFYNALSNEIKMTAPHKPLSIVFCDIDFFKSVNDTWGHLQGDRVIIKLS 343 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 I+ + R +D++AR+GGEEF +LL + + + A +AERIR++VE+ T + P+ + Sbjct: 344 EIMQRLSRRNDIVARIGGEEFAILLPETNADAAFDIAERIRKHVEQQTQATTKGDFPRII 403 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 TIS+G V + +N P ++ AD ALY AK GRN VV Sbjct: 404 TISLGIVTSVDNRSAPEQLADCADRALYMAKNRGRNCVVA 443 >UniRef50_UPI0001C34201 diguanylate cyclase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C34201 Length = 402 Score = 187 bits (474), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 111/391 (28%), Positives = 199/391 (50%), Gaps = 9/391 (2%) Query: 60 FMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFR 119 FM + + D+R+ ++LAF + + T+ + S++ ND IYY+FR Sbjct: 11 FMVMKYWCDKRRLYLVAIALAFTGSALLMIGTLTSFPAWLNLYQFSTINYNDAMIYYMFR 70 Query: 120 QMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 + + +L ++ + V + + + + LF V + A SSH ++L + Sbjct: 71 HILMAVLFIVSALLYVVRDVPLSRMTHTSLFFGMLLFTVVIIAL-AWFYSSHSSLFSLDL 129 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 + + +W I+I +W+ + +R W ++ C + + +L Sbjct: 130 IDNETRHFMAIWNRVINIILIVLWVATFVTLMIITRIRNMFWVSGNFLSLCYIGTLLMML 189 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIF-----SALRVTKNIAH--RDPLTNIFN 292 + +WY +R E ++ L ++ + + +F S L+ ++ + RDPLT ++N Sbjct: 190 IAGQAEDISWYRARLFETIATLLIIFVLLYDVFNLYRESHLKYQQSYQNSIRDPLTRLYN 249 Query: 293 RNYFFNELTVQSASAQKT-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 R+YF++ L SA +T P V++ D+D FK++ND +GH GD+V+K V ++ S+RP Sbjct: 250 RSYFYDALNHSLRSASRTQPVSVVVSDLDRFKRINDCYGHLQGDKVLKFVARLLMDSVRP 309 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 DD+ AR+GGEEF ++L + + A+ +AERIRE + ++ E +P+ +TIS+G Sbjct: 310 DDIAARIGGEEFVLMLANTPPDTARQVAERIREKLSSFDKNSSEEQLPEPITISMGVFTA 369 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVV 442 AD A+YEAKETGRN+VVV Sbjct: 370 TSAETTAETCVECADKAMYEAKETGRNRVVV 400 >UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9V5_ENT38 Length = 473 Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 116/392 (29%), Positives = 193/392 (49%), Gaps = 11/392 (2%) Query: 60 FMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFR 119 FM + + D+++ + ++ AF + + T+ + + V + I+++ R Sbjct: 62 FMVMKYWCDKKRIYHLAIAFAFTGSTVLLLATLTCFPVWLMQPGMPHVNYSGAMIFFMMR 121 Query: 120 QMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 + + +L LA V + ++ L + + L F VA S H E + L + Sbjct: 122 NVMMAVLFTLAGVLFIFRHSPLTRLM-RHLIFAGLLVFTLTMVTVAWFYSGHSELFPLDL 180 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 T +WK +I +WL L+ L LR W T + C V+ I+LL Sbjct: 181 INNTTRQFTALWKQIINGALIILWLIALTTLLIITRLRNLFWASGTFLCTCYVIILITLL 240 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAH--------RDPLTNIF 291 S WY +R E + L +++ + +FS R +I + RD LT ++ Sbjct: 241 PADFIGGSVWYSARLFETTASLLIILTLLHDVFSLYR-NSHIKYQQSYQNSIRDALTRLY 299 Query: 292 NRNYFFNELTVQSASAQKT-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR 350 NR+YF+ L + P V++ D+D+FK++ND +GH GD+V++ V N++ S+R Sbjct: 300 NRSYFYESLNQALGKITDSHPVSVIVCDLDYFKRINDNYGHLQGDKVLQFVANLLMDSVR 359 Query: 351 PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV 410 P D+ AR+GGEEF +LL++ +E A+ +AERIR ++ E +P+ VTIS+G Sbjct: 360 PQDITARIGGEEFVLLLSNTHSEAARLVAERIRLSLSSFDRITTEGMLPESVTISMGIYT 419 Query: 411 TQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + E AD A+YEAKETGRN+VVV Sbjct: 420 ATTLPVTAEECVERADKAMYEAKETGRNRVVV 451 >UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 Tax=Klebsiella RepID=B5XWN5_KLEP3 Length = 453 Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 120/441 (27%), Positives = 219/441 (49%), Gaps = 19/441 (4%) Query: 12 VLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQ 71 V + LL G + V ++F+ L + +F I T+A FM + + ++R+ Sbjct: 16 VFICLLAGFGIAGVTAFFHTSFSTTSSILFPLLTSFLMVFHI-TIA-CFMGMKYWSNKRR 73 Query: 72 FSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLAL 131 ++ F + + T+ + T + QND IYY FR + + +L ++ Sbjct: 74 LYLTPVAFGFACSALLMLGTLSSYPDWLTCSTTPVINQNDAVIYYFFRNIMMAVLFMSSI 133 Query: 132 VNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVW 191 V +L + +T + F ++ + SSH +++ + + +W Sbjct: 134 VLYYFRQRIMHSLKAHIITFAACIVFTLTIIFLSWVYSSHSPWLSVNFIDDLSHTFTPLW 193 Query: 192 KASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFC-AVLYNISLLFMSRYSV-STW 249 ++ +++ +W L + + + LR W + FC A LY + L + + TW Sbjct: 194 QSIIGWLLMAIWFITLILLISLSKLRNIFW--FSGAFFCSAYLYTLFQLVSTAGDLDQTW 251 Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKN-IAH------RDPLTNIFNRNYFFNELTV 302 Y +R E + L ++++ + +F R + + H RDPLT ++NR++F++ L Sbjct: 252 YQARFFETLCTLFLILVLLIDVFMLYRESNHKYVHSYQNSIRDPLTRLYNRSFFYDTLNQ 311 Query: 303 QSASAQ-KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGE 361 Q A + P V+I D+DHFK++ND +GH GD+VI+ +++ R DD AR+GGE Sbjct: 312 QLAKVNPQHPLSVIISDLDHFKRINDNYGHVAGDKVIQFAASVLENHSRVDDAAARIGGE 371 Query: 362 EFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEI 421 EF +LL + + A A+AERI RL + ++ +P+++TIS+G T++ +++ Sbjct: 372 EFALLLVNTAEKDALAIAERI-----RLAVNAEQHPLPERMTISMGLYTTRDRSVSAETC 426 Query: 422 YRLADNALYEAKETGRNKVVV 442 AD A+YEAK +GRN+VVV Sbjct: 427 VERADAAMYEAKNSGRNRVVV 447 >UniRef50_D0ZCJ5 Diguanylate cyclase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZCJ5_EDWTE Length = 456 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 125/400 (31%), Positives = 195/400 (48%), Gaps = 26/400 (6%) Query: 58 FIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYL 117 FIFMQ F +R+Q L +++L + +++ Q I +++ ND ++YL Sbjct: 62 FIFMQ--FNCERQQIYKIPLIVSYLLSASLLLCSLLFCQDIFFPEYKNALTLNDFVLFYL 119 Query: 118 FRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNL 177 R + +L AL +++ + + +SL + A +LS+H +L Sbjct: 120 IRYSGMAMLFLYALY---LYRRQEKGAIALGPVVALSLTMSVAVALGALLLSNH----SL 172 Query: 178 HIAEL------TNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCA 231 H L ++N Q ++ + M +W L + ++ L W VT +A Sbjct: 173 HSLWLEPRLLQVSQNYQAGYRQVVLPFMCTLWGALALLLIWQTRLATRFWLAVT-LASLI 231 Query: 232 VLYNISLLFMS-RYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR-------VTKNIAH 283 +L L + S + S WY S +V+ VM IF+ IF R ++ N A Sbjct: 232 ILGGFVLQWRSPQVSSVGWYGSLLFGLVANFYVMEIFLYDIFQRYRRIQIEYAISYNNAI 291 Query: 284 RDPLTNIFNRNYFFNELTVQSASAQKT-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 RD LT FNR Y++ L T P V++MDID FK +ND +GH GD+V+ V Sbjct: 292 RDGLTQTFNRAYYYGCLQRALPQCGATYPLGVLMMDIDRFKLINDRYGHLSGDRVLCEVA 351 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 IG+ RP+D++ARVGG+EF +LL D + +A+AERI +V L + P V Sbjct: 352 RAIGRGARPEDVVARVGGDEFCILLYHADAAQTRAIAERICRDVAALPLTALD-GTPLSV 410 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 T+SIG VV +E+ + AD ALY+AK GRN+VV+ Sbjct: 411 TLSIGGVVCEESRQSAQACVAQADMALYQAKLAGRNRVVM 450 >UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7E0_AZOSB Length = 471 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 4/164 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASA--QKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A DPLT NR F L + A A ++ P ++ +DIDHFK +ND GHP GD Sbjct: 304 RRLAATDPLTGASNRRQFMATLASEWARARRERAPLALLALDIDHFKHINDRHGHPAGDH 363 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 +KT V+ +RP D++ R+GGEEF ++L A +AERIR VE L D Sbjct: 364 ALKTFVSAAAGLLRPGDVIGRIGGEEFAIVLPGTQAADAHGIAERIRHGVEALALDI--D 421 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +P +T+S+G V+ + P ++ + AD LYEAK GRN+V Sbjct: 422 GVPVALTVSVGVAVSGPSCTEPGDLLKEADRRLYEAKNAGRNRV 465 >UniRef50_A6CY69 Putative GGDEF family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CY69_9VIBR Length = 244 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 7/165 (4%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 + + DPLT I NR YFF+ L + S TP+C+++MDID+FKKVNDT+GH GD + Sbjct: 84 RKQSESDPLTQIANRRYFFSTLATITKST--TPHCLLLMDIDYFKKVNDTYGHLAGDNTL 141 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K VV I IRPDD ARVGGEEF +LL DI+ A +AERIR + D P + Sbjct: 142 KEVVARIQDIIRPDDTFARVGGEEFALLLPDIEEHTAYEIAERIRCTI----ADTPFHYE 197 Query: 399 PQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKVVV 442 Q +I++ +TQ N I+ AD+ALY AK GRN+ +V Sbjct: 198 QQTFSITLSVGITQARYQERNNHIFSRADDALYIAKSRGRNQSMV 242 >UniRef50_UPI000185121C diguanylate cyclase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI000185121C Length = 466 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 105/181 (58%), Gaps = 11/181 (6%) Query: 271 IFSALRVTKNI-------AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDH 321 IF+ + KN+ A+ D LT I+NR FF E Q + Q TP+ +++MDID+ Sbjct: 279 IFTDMTEVKNLQSQLEHFAYYDELTGIYNRRAFFQYCEEAFQESKEQDTPFTIILMDIDY 338 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FKKVNDT+GH VGDQV++ V + + +L AR GGEEF + + E ALAE+ Sbjct: 339 FKKVNDTYGHSVGDQVLEQVAKVCQSQLHGHELFARYGGEEFVLGVKGYTEEEGAALAEQ 398 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 +R VE LT P+ I +++ + A+ ++ AL +I AD ALY AKE GRN+V Sbjct: 399 LRSEVEALTIHTPDGKITVTLSLGVAALTKEDEAL--YQILNHADQALYRAKEAGRNRVC 456 Query: 442 V 442 V Sbjct: 457 V 457 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 10/227 (4%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIF----MCHIFSALRV 277 +G+ F + Y I F + S ST Y ++++++L + + + A R Sbjct: 241 HGIFAAGFFMLSYGIVQAFHTTRSFSTVY--SQMDMMAQLREQQAWTQEALLQVQEANRK 298 Query: 278 TKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + +A D LT + NR ++ V + P ++ +D+DHFK++ND +GH GD Sbjct: 299 LEQLASTDALTGVANRRQLVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGD 358 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 +V+K V I +S+RP DLLARVGGEEF VLL D D A+ +AERIR +E L D P Sbjct: 359 EVLKQVAEAIQQSLRPSDLLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGL--DIPV 416 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + VT+S+G + + + AD LY+AK GRN+VV+ Sbjct: 417 QGVVLHVTVSVGCAQLGPDGADMKSLTHTADERLYQAKALGRNRVVI 463 >UniRef50_C6HUY5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUY5_9BACT Length = 702 Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 109/169 (64%), Gaps = 7/169 (4%) Query: 276 RVTKNIAH---RDPLTNIFNRNYFFNELTVQSASAQK---TPYCVMIMDIDHFKKVNDTW 329 R TK++ + RDPLT +FN+ F+ L + +Q+ P+ VMI+D+D FKK+NDT+ Sbjct: 274 RYTKDLEYYAVRDPLTGLFNQRVFWELLAYEIGRSQRHGNQPFSVMIIDVDDFKKINDTF 333 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GH GD+ ++ + +I + R +D++AR GG+EF V+L + +E A A+A+RIR +R Sbjct: 334 GHTFGDEFLQKIAGVIQATARKEDIVARYGGDEFAVILPEAASEHAVAMAKRIRAGFQRF 393 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 + ++PE + K ++SIG E+AL P +++ +ADN +Y AK G+N Sbjct: 394 SLESPE-GVRAKSSVSIGIASWPEHALEPKDLFLVADNMMYRAKAHGKN 441 >UniRef50_C7R6L5 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=C7R6L5_KANKD Length = 393 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 102/166 (61%), Gaps = 4/166 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + A D LT + +R +F E +Q + +K P+C+ ++D+D+FK+VNDTWGH GDQ Sbjct: 230 RTAAESDALTGVDSRGHFMQRAEALLQRSRFEKAPFCLFMIDVDYFKRVNDTWGHTCGDQ 289 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 ++ + + S+RP+D++ R GGEEF V L + +T AKA+A+R+++NV LT D Sbjct: 290 ILSKIAEVCQHSLRPNDIIGRFGGEEFVVGLPNTNTSEAKAVADRLKDNVAALTLDGEMS 349 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + VTI I T+++ L+ + ADN LY K GRN+VV+ Sbjct: 350 ELRLSVTIGIAVADTEDDDLDV--LITRADNMLYVGKREGRNRVVI 393 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/175 (45%), Positives = 105/175 (60%), Gaps = 10/175 (5%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVND 327 H+ S L + +A+ DPLT +FNR F F E A+ P+ +MI+DID FKKVND Sbjct: 154 HLRSKL---ERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSLMIIDIDLFKKVND 210 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 T+GH VGD+VIK V NI + +R D+LAR+GGEEF +LL D D + A LAER+RE + Sbjct: 211 TYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDIDSAYVLAERLREAQQ 270 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + E P +TISIG + EI++ AD ALY +K GRN V V Sbjct: 271 QY----EEQKTP-SITISIGVATLRSQDKAFLEIFKRADKALYSSKNVGRNSVNV 320 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 248 TWYISRTIEVVSKLTVMVIFMCHIFSALRVT-------KNIAHRDPLTNIFNRNYFFN-- 298 T Y +++ V+ + ++V+ C++F + R I+ RDPLT ++NR F N Sbjct: 315 TQYKTQSSFVLVAMAIIVLLTCYLFVSRRKLYLAQQKLMRISERDPLTGLYNRRKFMNYY 374 Query: 299 ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLAR 357 E ++A KTP V+++DIDHFK ND +GH GD + V I I RP D AR Sbjct: 375 EKEWKAAQRSKTPLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTAR 434 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NAL 416 GGEEF LL + D A +AE+IR VE+L + A +T+SIG QE + + Sbjct: 435 YGGEEFIGLLPETDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDKI 494 Query: 417 NPNEIYRLADNALYEAKETGRNKVVV 442 N E+ LAD ALYEAKE GRN V + Sbjct: 495 NRMELINLADKALYEAKEAGRNCVKI 520 >UniRef50_Q479Y1 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Y1_DECAR Length = 413 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 5/171 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + IA RDPLT +FNR F L ++ + +P +M++D+DHFKK+NDTWGH GD+ Sbjct: 218 RAIAERDPLTGVFNRRSFLTLLDKSISHSDRMASPLSIMLIDLDHFKKINDTWGHKSGDE 277 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 ++ V + IR D++ RVGGEEF +LL D D +A +AER+R V N Sbjct: 278 ALRHFVAVAVPCIRNGDIIGRVGGEEFAILLPDTDISKAATVAERLRCEVAARPVKNEHG 337 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 +I +T+SIG +++ ++R ADNA+Y AK+ GRN+V V +N Sbjct: 338 SI--TLTVSIGVTHYRKDEAPEVTLHR-ADNAMYTAKDKGRNQVEVTPDLN 385 >UniRef50_A6LR61 Diguanylate cyclase n=3 Tax=Clostridium RepID=A6LR61_CLOB8 Length = 1784 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 10/162 (6%) Query: 285 DPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT ++NR YF L + SA A+++ + VM+ DID FK VND +GH GD+V+ V Sbjct: 1450 DKLTGVYNRKYFEEALLFLLDSAKARESEFAVMMFDIDDFKGVNDKYGHQTGDEVLVKVA 1509 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE--RLTGDNPEYAIPQ 400 + + K + D++ R GGEEF +LL +++ E A L ERIR+N+E R+ GD + Sbjct: 1510 DEVKKCMSKGDIIGRYGGEEFIILLPNVNCEAAINLGERIRKNIEEARILGD------KR 1563 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 KVT+SIG ++ +LN EI R AD ALY+AK G+N+ +V Sbjct: 1564 KVTVSIGIAMSSYESLNNEEIIRRADQALYKAKRDGKNRCIV 1605 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 80/188 (42%), Positives = 111/188 (59%), Gaps = 15/188 (7%) Query: 261 LTVMVIFMCHIF-SALRVTKNIAHRDPLTNIFNRNYFFNEL---TVQSASAQKTPYCVMI 316 L V++ F +IF L + ++ D LT ++N+ F NE+ +Q A K P ++I Sbjct: 283 LAVILGFSVYIFLKDLEKFRYLSETDRLTGLYNKGKF-NEVLQREIQRAKRYKRPLSLII 341 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 DIDHFKK+NDT+GH VGD+V+K + +I K+IR D AR GGEEF +L + + E AK Sbjct: 342 FDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPETNVEGAK 401 Query: 377 ALAERIRENVERLTGDNPEYAIPQ--KVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 LAE++R+ VE Y P KVTIS+G V E P + AD ALY+AKE Sbjct: 402 KLAEKLRQAVE-------TYKFPTVGKVTISLG-VAQLEPDEKPEDFIVRADMALYKAKE 453 Query: 435 TGRNKVVV 442 GRN+V + Sbjct: 454 GGRNRVEI 461 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 11/180 (6%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A D LT + NR +F L ++A AQ+ P V+++D DHFK +NDTWGH GD Sbjct: 508 EQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAGDM 567 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V++ + +++G S+R +DL+ R+GGEEFGVLL + ERA AERIR VE D P Sbjct: 568 VLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAVE----DAP-V 622 Query: 397 AIPQ---KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFC-ESP 452 A+ T+S+GA + + +++ R AD+ L AKE GRN+V + C ESP Sbjct: 623 AVRDVWVGCTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRVCAQQARPACAESP 682 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 118/198 (59%), Gaps = 23/198 (11%) Query: 257 VVSKLTVMVIFMCHIFSALRVT--------KNIAHRDPLTNIFNRNYFFNELTVQSASAQ 308 VV + T+ ++ M F AL +T +++A DPLTN+FNR F L ++AQ Sbjct: 242 VVLEATLSLVLMA--FGALMLTNEHITRELRHLAEVDPLTNVFNRRAFLTLLEKAISNAQ 299 Query: 309 KT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVL 366 +T V+++D+DHFKK+NDTWGH GD+V++ V + +R +D++ R+GGEEF + Sbjct: 300 RTQSGLPVLVIDLDHFKKINDTWGHQSGDEVLRHFVALANGCLRKEDVMGRLGGEEFAIF 359 Query: 367 LTDIDTERAKALAERIRENVER---LTGDNPEYAIPQKVTISIGAVVTQENALNPNE-IY 422 L + +E ++A+AER+R V +TG P +T+SIG VTQ ++ + Sbjct: 360 LPNASSEGSQAVAERLRALVAHHPAMTGRG-----PIALTVSIG--VTQYGGGETSDFVL 412 Query: 423 RLADNALYEAKETGRNKV 440 + AD A+Y AKE GRN+V Sbjct: 413 QRADEAMYRAKERGRNRV 430 >UniRef50_A1SVT3 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVT3_PSYIN Length = 298 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 109/169 (64%), Gaps = 17/169 (10%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQS------ASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 +A DPLT + NR EL VQ+ A+ + + ++ +DID FK+VNDT+GHP G Sbjct: 137 LATTDPLTGLLNRR----ELQVQAQKVTHQAARNLSTFALLFIDIDFFKRVNDTYGHPAG 192 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D+V+ + NI+ + R D++AR+GGEEF +LL +ID E A LAER+R+ +E+ T D+ Sbjct: 193 DKVLICLANILTQERRVTDIVARMGGEEFALLLPNIDEENAYKLAERLRKKIEKQTIDHI 252 Query: 395 EYAIPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVVV 442 K+T+SIG VVT++N N + + LAD ALYE+KE GRN+ V Sbjct: 253 ------KITVSIGLVVTRKNTQTNFDILLELADQALYESKEWGRNRTHV 295 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 7/161 (4%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 A DPLT + NR E T+Q A++ P+ +M+MD+D FK +NDT+GH GD+V++ Sbjct: 373 ARTDPLTGLTNRRTL--EETMQKWMAEQIPFSIMMMDLDRFKAINDTYGHQAGDEVLRHF 430 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 II S+RP+D+ R GGEEF VL++ E A +AERIR +E T NP I Q+ Sbjct: 431 AKIISSSLRPEDVSCRFGGEEFVVLVSHTGLEEAYQVAERIRRALETRT--NP---IGQR 485 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +T+S G +A++P + +AD A+Y+AK GRN+ ++ Sbjct: 486 LTVSQGIAHYPSHAVSPEGLLHVADEAMYKAKRAGRNQTMI 526 >UniRef50_A4TZG0 GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZG0_9PROT Length = 392 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 106/172 (61%), Gaps = 10/172 (5%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 R +++A DPLT + NR FF + QS + P+ V+++D+D FK +ND GHP Sbjct: 221 RTLEHLASVDPLTEVLNRRSFFAKAQGLWQSHQSDGRPFSVLMLDLDRFKAINDRHGHPT 280 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR---ENVERLT 390 GD+VI ++ ++R DDLL R+GGEEF ++L + T +A +AERIR E VE L+ Sbjct: 281 GDRVIVAFARLLRDAMRHDDLLGRMGGEEFAIILPGVATAQALEVAERIRAASEAVEVLS 340 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 D ++T+SIG + + A + +++ + AD ALY+AK+ GRN+VV+ Sbjct: 341 DDGFRV----RLTVSIG-LALGDGATSLDDLMKRADAALYQAKDQGRNRVVM 387 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 7/162 (4%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 AH DPLT + NR + + + + + +++DIDHFK+VNDT+GH +GD VI+ + Sbjct: 366 AHTDPLTGLLNRRGIYESIELILPKSNQV--AAIVIDIDHFKRVNDTYGHNIGDDVIRLL 423 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 I + R DL+ R GGEEF LL D D ++A +AER+R+ VE++ IP+ Sbjct: 424 AKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAVDIAERLRKKVEKMP-----LPIPEN 478 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 +TIS+G A + + ++AD+ALY+AK GRN+VV + Sbjct: 479 ITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNRVVTK 520 >UniRef50_D1B2B4 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B2B4_SULD5 Length = 381 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 7/164 (4%) Query: 279 KNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 +++A D LT++FNR +F + + A + C ++DID FK++NDT GHPVGD Sbjct: 218 QHLAQTDILTSLFNRRHFLTLAQQEIIKALRYEHSLCFAVLDIDFFKRINDTLGHPVGDI 277 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ T+ + SIR D++AR+GGEEF LL ++ E+A+A ER+R+ + EY Sbjct: 278 VVSTLARHLKHSIRQSDIVARIGGEEFAFLLLHVNEEQARAKMERLRQEISECI---IEY 334 Query: 397 AIPQ--KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 + + VT+SIG + Q +E+Y AD LYEAK+ GRN Sbjct: 335 GVDKTLSVTVSIGLAMLQPPIQTLDELYMKADQKLYEAKKAGRN 378 >UniRef50_B9LA95 Diguanylate cyclase n=1 Tax=Nautilia profundicola AmH RepID=B9LA95_NAUPA Length = 470 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 110/175 (62%), Gaps = 16/175 (9%) Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVND 327 M +++ ++ +N + D LT+I NR+ +++ Y V+++D+DHFK++ND Sbjct: 312 MLFLYNYSKMKRN-SQIDYLTDILNRSGCLSKIKALD------DYSVLVLDVDHFKQIND 364 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 T+GH VGD+++K V+++ +IR +D+ R GGEEF ++L D D E AK +AE+IR+ VE Sbjct: 365 TYGHNVGDEILKRFVDVVRNTIRKNDIFCRWGGEEFVIILPDTDKETAKLVAEKIRKTVE 424 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 DN K+T+SIG ++N NE +++AD LYEAKE GRN+VV Sbjct: 425 NTDFDN------LKITVSIGVAQKEKNF---NETFKIADMKLYEAKELGRNRVVA 470 >UniRef50_A0LU23 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LU23_ACIC1 Length = 440 Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%) Query: 279 KNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 ++ A DP T + N Y+ E + A + ++++D+DHFK VND +GH +GD Sbjct: 245 RHAARTDPKTGLANAAYWREVAEREIARARSGGESVAILLVDVDHFKAVNDRFGHLIGDD 304 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V++ V + +RP D + R GGEEF +LL D E+A AER+R+++ LT D P + Sbjct: 305 VLRAVAGGLTHGLRPRDFVGRFGGEEFVILLAGSDLEQAAVAAERVRQHIAHLTVDTPLH 364 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 P VT+S+G +EN + E+ AD ALYEAK GRN V V Sbjct: 365 GDPVSVTVSVGVAAFRENGHSVLELLDAADAALYEAKRAGRNCVRV 410 >UniRef50_D1U6K0 Diguanylate cyclase with PAS/PAC sensor and hemerythrin-like metal-binding domain n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6K0_9DELT Length = 457 Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 105/170 (61%), Gaps = 5/170 (2%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 ++ +DPLT + NR +F T + ++ P ++I+DIDHFK +ND GH VGD+V+ Sbjct: 146 VSQQDPLTKVANRRFFMEHATRELTRGKRFHEPQAILIIDIDHFKTINDKHGHDVGDEVL 205 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K + K++R D+ R+GGEEF +L + + A+ +AER+RE+VERL+ + I Sbjct: 206 KAMATACSKALREVDVFGRIGGEEFAAMLLNTNDSVARIVAERVRESVERLSVNVGGKEI 265 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV-VVRDVVN 447 P TISIG V + ++ ++AD ALY AKE+GRN+V V+ DVV Sbjct: 266 P--FTISIGLVSFLGGSNTLDDRMKMADKALYRAKESGRNRVEVLVDVVE 313 >UniRef50_A8IQ43 Putative diguanylate cyclase (DGC) n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IQ43_AZOC5 Length = 566 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/165 (44%), Positives = 98/165 (59%), Gaps = 3/165 (1%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIM-DIDHFKKVNDTWGHPVGDQV 337 K +A DPLT + NR F V SA T ++M DIDHFK+VNDT+GH GD V Sbjct: 396 KELADTDPLTGLLNRRSFLAMADVALDSAHATGQLGILMADIDHFKQVNDTYGHAAGDAV 455 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K V + +++R D LAR GGEEF LL D D +ALAER+RE V + A Sbjct: 456 LKHVADTFVRTLRAHDHLARFGGEEFVALLQDTDIAGMQALAERVREAVAATKVVFEDQA 515 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 I VTISIGA + + + +++ AD ALYEAK +GRN++V+ Sbjct: 516 I--AVTISIGAALAHDQDRDMHKVIERADLALYEAKNSGRNRIVI 558 >UniRef50_A9C2G6 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A9C2G6_DELAS Length = 393 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 7/172 (4%) Query: 271 IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 +F+ALR +N D LTN+ NR F ++ A P V+I DIDHFK++ND+WG Sbjct: 217 VFTALREERN---HDSLTNLLNRRAFQEAAELRLADPHMAPISVLIGDIDHFKRINDSWG 273 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+V++ V + + +R DDL+ R GGEEF +LL + A+ +A+RIR L+ Sbjct: 274 HDCGDRVLQAVAQTLQQHVRNDDLVCRFGGEEFVLLLMRTTPQEAERVAQRIRAQ---LS 330 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 D A Q+VTIS G N + + R AD LY AK+ GR++V V Sbjct: 331 ADGYVLAAGQRVTISFGIAPVAANTALTDALTR-ADGLLYAAKQAGRDRVHV 381 >UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneumophila RepID=A5IAA0_LEGPC Length = 714 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 6/190 (3%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--Y 312 I ++LT + + + +LR + RDPLT ++NR Y + L Q A++T + Sbjct: 523 ITAFAELTALALANVRLGESLRYQ---SIRDPLTGLYNRRYLEDFLFKQLHQAERTKASF 579 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 ++++D+DHFKK+NDT+GH GD V+K + I+ IR D+ R GGEEF +LL D+D Sbjct: 580 AILMLDLDHFKKINDTFGHEAGDFVLKEIGQILNNDIRLGDVATRYGGEEFVLLLFDVDA 639 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 AK A+ +R + +L + Q VT SIG + ++A +P+E+ AD ALY+A Sbjct: 640 NAAKTRADNLRSAISKLQVKYGAQYVGQ-VTASIGISIYPDDAKSPDELIEAADKALYQA 698 Query: 433 KETGRNKVVV 442 K GRN V++ Sbjct: 699 KNKGRNMVLL 708 >UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R8E3_AMMDK Length = 414 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 13/214 (6%) Query: 238 LLFMSRYSVSTWYISRTI--EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 L F+ R +++ R E + +L + +++ R K +A RD LT ++NR Sbjct: 208 LFFLRRSPAPAFFLRRAALRENLGRLGAAALVNSYLY---REVKELAERDGLTGLYNRRK 264 Query: 296 FFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 F+ ++ A + ++++D+D+FK NDT+GH GD+ ++ + +IGK IR D Sbjct: 265 FWEIFLKELERAKRYRRKLAILLLDVDNFKDYNDTFGHLAGDECLRRIGEVIGKEIRASD 324 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 AR GGEEF +LL + E A A+AER+R VE + P P TIS+G V E Sbjct: 325 TAARYGGEEFVILLVETGGEGAVAVAERLRHRVEDIGKREP---FP---TISLGVAVFPE 378 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 +A + + ADNALY AK +G+N+ V R + Sbjct: 379 DAQSAEALLTCADNALYTAKRSGKNRTVWRGKIR 412 >UniRef50_D0J0D0 Diguanylate cyclase n=2 Tax=Comamonas testosteroni RepID=D0J0D0_COMTE Length = 286 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 88/270 (32%), Positives = 139/270 (51%), Gaps = 18/270 (6%) Query: 184 NENGQVVWKASYVTIMIFMWLTLLSVN-LYFNGLRYDIWNGVTVIAFCAVLYNISLLFM- 241 N +V+W + + I+ F+ +++ + +GL ++ A VL I +LF+ Sbjct: 14 NIAARVLWLNTGLGIIHFIPFPAIALKKVRRDGLEKLLYRSYGAFAIYTVLRPIMVLFLG 73 Query: 242 ---------SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFN 292 S Y + T S +V ++++ M + LR +N D LT + N Sbjct: 74 FTELQDMLSSIYWLVTMLGSLLFSLVFSGLMLIVSMRDAMATLRDERN---HDMLTRVLN 130 Query: 293 RNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 R F+ + + P +++ D+DHFK+VND WGH GD V+K V +I S+R Sbjct: 131 RRGFWELADPLARDRKAQPLSIVVADLDHFKRVNDNWGHEYGDGVLKAVAEVIQASVRGT 190 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 DL+AR GGEEF +LLT D E A+ +A+RIR + P+ Q+VT+S+G VV+ Sbjct: 191 DLVARFGGEEFVLLLTHADIETAQRVAQRIRAGAVEIIAPLPD---GQRVTLSMGVVVSP 247 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVV 442 + + E AD LY+AKE GR++VVV Sbjct: 248 FGS-DLREALMRADQQLYKAKELGRDQVVV 276 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 15/196 (7%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQKT 310 R +E +S + ++ +++ LR+ K +A +D LT ++NR YF L + + K Sbjct: 353 RRLENISGQVALAVYNGYLY--LRL-KELAQKDELTGLYNRRYFLERLNEEHLRSRRHKL 409 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 Y ++++DID+FKK+NDT+GH GD V+ + ++R DL AR GGEEF VLL Sbjct: 410 NYTIVLLDIDYFKKINDTYGHDCGDLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQT 469 Query: 371 DTERAKALAERIRENVER----LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLAD 426 + A LAER+RE V+ G +Y T+S+G E+A E+ LAD Sbjct: 470 GKKEAYLLAERLREKVKERVLIFQGQKVKY------TVSMGLAAYPEDAEEYRELLSLAD 523 Query: 427 NALYEAKETGRNKVVV 442 ALY+AK GR+KVV+ Sbjct: 524 KALYQAKNRGRDKVVM 539 >UniRef50_Q30SN7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SN7_SULDN Length = 516 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/172 (40%), Positives = 103/172 (59%), Gaps = 6/172 (3%) Query: 285 DPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 D +T+++NR YF F+ + ++ P +IMDIDHFK+ NDT+GH GD IK V Sbjct: 346 DGMTSLYNRRYFDEIFDNYLRSNQRTKQVP-VFIIMDIDHFKEYNDTYGHQAGDVAIKIV 404 Query: 342 VNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 ++ + R D+ R+GGEEFG+L + I+ A LA IR+ +E ++ + + Sbjct: 405 SKVMKTFLKRATDMAFRLGGEEFGILCSGINAIEALHLAHDIRKGIENEKIEHKSSKVNE 464 Query: 401 KVTISIGAVVTQENALNP-NEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 +TISIG +V +E +N EIYR AD ALY+AKE GRN+ V+ D FC+ Sbjct: 465 YLTISIGIIVIEEGKINSTKEIYRCADKALYKAKENGRNQAVLYDAKMFCDD 516 >UniRef50_Q1GEL0 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Rhodobacterales RepID=Q1GEL0_SILST Length = 467 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 31/197 (15%) Query: 274 ALRVTKNIAH-------------------RDPLTNIFNRNYF--FNELTVQSASAQKTPY 312 ALR+T +AH RDP+T ++NR Y F E Q A + + + Sbjct: 267 ALRITAQLAHQQRAEMIRNTLRDGYRAAMRDPMTGLYNRRYARPFLEQVTQDAQSAGSNF 326 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 VM+ D+DHFK++ND +GHPVGD V+ + +R DLLAR+GGEEF ++L D+ Sbjct: 327 AVMVADLDHFKRINDAYGHPVGDAVLIEAARRLQAELRGCDLLARIGGEEFMLVLPDLHP 386 Query: 373 ERAKALAERIRENVERLTGDNP----EYAIPQKVTISIGAVVTQEN--ALNPNEIYRLAD 426 + A +A R+ R +P A P +VTIS+GAVV Q L+ ++++ AD Sbjct: 387 DEASTVANRL----CRAISGSPFVVKGCAQPLEVTISVGAVVAQHGTQPLSADDLFVAAD 442 Query: 427 NALYEAKETGRNKVVVR 443 LYEAK GRN+ ++ Sbjct: 443 RTLYEAKHAGRNQAAIK 459 >UniRef50_A7HJQ0 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A7HJQ0_FERNB Length = 1320 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 117/195 (60%), Gaps = 16/195 (8%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ---SASAQKTPY 312 +++SK+ ++ +F + +T+ ++ DPLT +F R Y+F EL Q +A QK Sbjct: 1123 KLISKIEIIEYGFVAVFKSF-LTRMRSYVDPLTKLFTR-YYFAELLSQYFENAVNQKDSL 1180 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 +++ DID+FKK+NDT+GH GD+V+KT+ I+ ++R D++ R GGEEF + D+ Sbjct: 1181 AIVMCDIDNFKKINDTYGHLTGDKVLKTIAKILRDNVRTTDIVGRFGGEEFIMAFPSTDS 1240 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-----PNEIYRLADN 427 E + ER+R RL D E+ P K+T+S G V ++ N P ++ RLAD Sbjct: 1241 EEVVLILERLR----RLIKDVQEF--PFKLTLSFGVVSYPQDTENIIIKAPEDLIRLADT 1294 Query: 428 ALYEAKETGRNKVVV 442 ALY AK TG++K+VV Sbjct: 1295 ALYHAKNTGKDKIVV 1309 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 6/189 (3%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPY 312 +EVV++ M + H+ LR T++I RDPLT ++NR Y L + + + P Sbjct: 394 VEVVAEQLAMALHNLHLRHRLR-TQSI--RDPLTGLYNRRYLEESLLRELSRCARRDLPL 450 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 +M++D+DHFK +ND +GH GD ++ ++G +RP+D+ R GGEEF V+L Sbjct: 451 ALMMLDLDHFKALNDRFGHAGGDALLAAFGQLLGGLVRPEDIACRYGGEEFTVILPGAAA 510 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 + A+ AE+IR VE++ + +P +T+SIG E+ E+ R AD ALY Sbjct: 511 DVAQRRAEQIRAAVEQMQVQHHGQMLP-SITVSIGVAAYPEHGSTGEELLRCADAALYCG 569 Query: 433 KETGRNKVV 441 K +GRN+V Sbjct: 570 KRSGRNRVA 578 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 111/195 (56%), Gaps = 11/195 (5%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNI------AHRDPLTNIFNRNYFFNELTVQSASA 307 ++ V K + + + + SALR + + A DPLT ++NR +FF + + Sbjct: 99 AVDYVIKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERV 158 Query: 308 QK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGV 365 Q+ T +I+DIDHFKKVND +GH VGD V++ + + ++ R DL R GGEEF + Sbjct: 159 QRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVI 218 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLA 425 L D DTE A +AER R+ VE L+ N E P VTIS+G EN + + R A Sbjct: 219 CLPDTDTEGALLVAERTRKKVEELSF-NTEKG-PLHVTISLGVSSANENTTLEDMLKR-A 275 Query: 426 DNALYEAKETGRNKV 440 D+ALY+AK+ GRN+ Sbjct: 276 DDALYQAKQNGRNRT 290 >UniRef50_Q2SP63 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SP63_HAHCH Length = 584 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 9/187 (4%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVM 315 + LT MV+ + S + + + D LT +FNR +F ++ + AQ K P ++ Sbjct: 381 IGSLTEMVLLSLALSSRVNELQRKTYTDALTGLFNRRHFDDKFATEFHRAQQSKQPLTLL 440 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++DID FK+ NDT+GH VGD +K V I+ K +R + R GGEEF V+L + D + A Sbjct: 441 VIDIDCFKQFNDTYGHNVGDHALKEVARILAKGVRKPNCPCRYGGEEFAVILPNTDHDAA 500 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKE 434 +LA R+R VE T K++IS+G + + PN+++ AD ALY AK+ Sbjct: 501 MSLANRLRVKVEEETESG------YKLSISVGVASMAHDEFDCPNKLFERADYALYTAKQ 554 Query: 435 TGRNKVV 441 GRN+V+ Sbjct: 555 QGRNRVI 561 >UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SX4_GEOMG Length = 353 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 103/164 (62%), Gaps = 5/164 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 KN++ RD LT ++NR F L V++ P+ ++++D+D FK+VNDT+GH GDQV+ Sbjct: 184 KNLSMRDHLTGLYNRRVFEAMLEVEARKRTTKPFSLLLIDLDDFKRVNDTYGHGAGDQVL 243 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD-NPEYA 397 V ++ S R D+++R GGEEFGVLL D + A+ +AER R+NV L+ N E Sbjct: 244 VAVAKMLRLSFRKSDVVSRYGGEEFGVLLPDTSQDSARVVAERFRQNVATLSLPVNKEKI 303 Query: 398 IPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +P T+S+G A VT + ++ AD ALY+AK TG+N+V Sbjct: 304 MP---TVSVGIASVTLRLGIEVADVIEEADRALYQAKVTGKNRV 344 >UniRef50_A4CF43 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF43_9GAMM Length = 603 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 69/163 (42%), Positives = 97/163 (59%), Gaps = 4/163 (2%) Query: 285 DPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT I NR+YF +LT++ + ++TP VM++DID FKK+NDT+GH GD I+ V Sbjct: 436 DSLTGIRNRSYFDKKLTMEFRRSHREQTPLAVMMLDIDFFKKINDTFGHLAGDDAIRFVA 495 Query: 343 NIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 + I S+ RP D + R GGEEF V+L + DTE A +AE IR + I Sbjct: 496 HTIQTSLKRPSDEVCRYGGEEFAVILPNTDTEGALLVAEAIRAQISEAQVHTTAGIINMT 555 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +++ + + + Q N PN+ LAD ALY+AK GRN+VV D Sbjct: 556 ISVGLFSDIAQRNH-EPNQYTALADKALYQAKHAGRNQVVFYD 597 >UniRef50_C9YC42 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC42_9BURK Length = 409 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 9/171 (5%) Query: 276 RVTKNIAHRDPLTNIFNRNYFF----NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGH 331 R + + +D LT +FNRN F NEL + A Q + ++++D+DHFK++NDTWGH Sbjct: 243 RELERLTRQDGLTGLFNRNTFVELSTNEL--KRAKRQGSATTILLLDLDHFKRINDTWGH 300 Query: 332 PVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTG 391 P GD V++ V + S+R DL+ R+GGEEF VLL E ++ +AE+IR+ +E Sbjct: 301 PAGDVVLRHVAQTMVNSVRSTDLVGRLGGEEFIVLLPHTTAEASRKIAEKIRQRLE--VS 358 Query: 392 DNPEYAIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 D VT SIG + T E + + +Y AD ALY AK+ GRN+V+ Sbjct: 359 DIRWEGKRIAVTASIGLSGTTAEESREFDSLYTEADKALYLAKQRGRNRVI 409 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 17/201 (8%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYC 313 E++S L V+ F A R + ++ DPLT + NR + + ++ + A +T P Sbjct: 279 EILSSLEVL-------FHASRSSNDV--EDPLTRVLNRRFLPSIISYELRVAHQTGRPMS 329 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 V+ +DIDHFK +NDT+GH GD V++ + ++ ++ R D++ R GGEEF VL+ D DTE Sbjct: 330 VLFLDIDHFKHINDTFGHAAGDSVLQAIARVLEEASRLSDVIFRYGGEEFLVLMGDTDTE 389 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPN--EIYRLADNALYE 431 + AER+R+ +E P+ + Q +T+SIGA + A +P+ E+ R AD ALY Sbjct: 390 QMLIGAERLRQKIENTPIRLPDGNLHQ-ITVSIGAA---QYAGHPDYEELLRAADAALYR 445 Query: 432 AKETGRNKVVVRDVVNFCESP 452 AK GRN++ V D + +P Sbjct: 446 AKRNGRNRIEVADAPHHTPAP 466 >UniRef50_C6C017 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C017_DESAD Length = 377 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 14/209 (6%) Query: 245 SVSTWYIS----RTIEVVSKLTVMVIFM-CHIFSALRVTKNIAH------RDPLTNIFNR 293 +VS Y S +T +++ L +++ M +F ++ + +N RD LT +NR Sbjct: 170 AVSRAYSSIHDLKTKTIIATLGAILLGMISGVFGSIWLARNRKQMIEFVTRDALTGAYNR 229 Query: 294 NYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 + L + K + +++D+D+FK VNDT+GH GD V+K V K +R +D Sbjct: 230 RALDDAL--HQLNGDKGSFAALLLDLDNFKSVNDTYGHDAGDLVLKYFVEETQKVLRSND 287 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 L R GGEEF +LL D E A ALAERIR++VE T P +T+SIG + + Sbjct: 288 LFGRYGGEEFLILLYDTKLEHAAALAERIRKSVESNTVYLPSSGAHHSLTVSIGCAAS-D 346 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVV 442 + E R+AD A+Y+AK++GRN+VVV Sbjct: 347 GSRPSEETVRMADKAMYKAKQSGRNQVVV 375 >UniRef50_Q30XX0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XX0_DESDG Length = 252 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 96/161 (59%), Gaps = 7/161 (4%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT++FN+ +F L + A Q+ +P CV+++D+DHFKKVNDT GH GD V+ V Sbjct: 83 DPLTSLFNKRHFDLRLGQEVARHQREDSPMCVIMLDLDHFKKVNDTLGHQAGDVVLMAVA 142 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL---TGDNPEYAIP 399 + + +R +D+LARVGGEEF V++ D ALAERIR VE G E I Sbjct: 143 STLRGCVRTEDVLARVGGEEFAVVVPRTDMHGGAALAERIRAAVEEQIIPVGGGRETTI- 201 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +V++ + + + P+++ AD ALY AK GRN+V Sbjct: 202 -RVSLGVACMEAGSVPVLPHDLMEQADEALYRAKANGRNRV 241 >UniRef50_C9RK09 Diguanylate cyclase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK09_FIBSS Length = 605 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 4/166 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPY--CVMIMDIDHFKKVNDTWGHPVGDQ 336 K++A RD LT + N L + A + Y V++MDIDHFK+VNDT+GHPVGD+ Sbjct: 428 KDLATRDGLTGLMNHRSLQEALRTEKVRADRKKYNIGVLMMDIDHFKRVNDTYGHPVGDE 487 Query: 337 VIKTVVNIIGKSIRPD-DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 VIK + I IR + D++AR GGEEF V L D E AERIR+ V +L N Sbjct: 488 VIKGIATAISGEIRKEIDVVARYGGEEFVVALVDTTPEGMIETAERIRKAVGKLEF-NVH 546 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 P +VT+SIGA + + + + AD ALY+AK+ GRN+VV Sbjct: 547 LTDPLRVTVSIGAFLVEPEFSDMKKAVNNADQALYKAKDGGRNQVV 592 >UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepID=Q8D4A5_VIBVU Length = 357 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 12/195 (6%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN------YFFNELTVQSASAQKT 310 V+ L V H + +AH DPLT NR YF N+ Sbjct: 166 VLETLANWVAAQVHKHQQINKMIELAHIDPLTGALNRRAFVEATYFIND----KPRHYDH 221 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 ++++D+D FK++ND +GHP GD+V+ + + K IR DDLLAR GGEEF +LL + Sbjct: 222 HTALLMIDLDKFKEINDQFGHPAGDKVLMQIAATLKKQIRSDDLLARFGGEEFAILLHHV 281 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 + E A LAE +R VE+LT ++ ++ I + T+SIG + E+ +LADNALY Sbjct: 282 NAEEAMTLAETLRVTVEQLTIEHHQHRI--QCTVSIGIALPSSPNQGFEELMQLADNALY 339 Query: 431 EAKETGRNKVVVRDV 445 AK +GRN++++ D+ Sbjct: 340 VAKRSGRNQIILSDM 354 >UniRef50_Q47WJ9 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WJ9_COLP3 Length = 431 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 109/182 (59%), Gaps = 7/182 (3%) Query: 265 VIFMCHIFSALRVTKNI---AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDI 319 ++F+ +F LR+ + D LT + NRN F E V S + Q ++++D+ Sbjct: 243 IVFVLILFRQLRIRNKLILLTRTDALTGLSNRNTLFKHGEKMVSSFTEQPEELSILLLDL 302 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFKK+ND++GH +GD+++ V +++ +++R DLLAR GG+EF LL D+ +AKA+A Sbjct: 303 DHFKKINDSFGHDIGDEILMAVSDLVKETMRSRDLLARFGGDEFVALLPFADSNKAKAIA 362 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 RI E + + D + +VT SIG +N ++ +++ AD A+Y+AK+ GRN Sbjct: 363 MRINEKISQY--DFSSLVLQSRVTFSIGVATMADNKMSFDDLLHDADLAMYQAKDQGRNT 420 Query: 440 VV 441 V+ Sbjct: 421 VI 422 >UniRef50_A6DA98 Diguanylate cyclase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DA98_9PROT Length = 350 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/162 (41%), Positives = 93/162 (57%), Gaps = 11/162 (6%) Query: 285 DPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT ++NR YF N++ K P+ M++DID+FKK+NDT+GH +GD+V+K V Sbjct: 195 DPLTKLYNRLYFNNQINYLKNQYERNKKPFSAMLIDIDNFKKINDTYGHHIGDEVLKNVA 254 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT--GDNPEYAIPQ 400 II +IR D+ R GGEEF +LL + + +AK +AERIR+ +E DNP Sbjct: 255 KIIKTTIRKTDIACRYGGEEFIILLPETEKSKAKEIAERIRKKIESSIQYDDNP------ 308 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VTIS G E + D LY AK TG+NK++ Sbjct: 309 -VTISAGVGEFNEKYKTIHHFIHDVDEGLYVAKRTGKNKIIT 349 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 18/196 (9%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAH---RDPLTNIFNRNYFFNEL--TVQSASAQK 309 I S+LT + F+ +R+ +N+ + RDPLT ++NR Y + L + + K Sbjct: 512 ITAFSELTALA------FANVRLRENLRYQSMRDPLTGLYNRRYLEDFLLKQIHQSERTK 565 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 +P ++++D+DHFKK+NDT+GH GD +K + I+ + IR D+ AR GGEEF V + Sbjct: 566 SPISLLMLDLDHFKKINDTYGHDAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYN 625 Query: 370 IDTERAKALAERIRENVERLT---GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLAD 426 D + K AE IRE V RL G P I T+SIG V + N NE+ AD Sbjct: 626 TDEKTIKTRAESIREAVSRLQVKYGAQPVGPI----TVSIGVAVYPTDGRNTNELIESAD 681 Query: 427 NALYEAKETGRNKVVV 442 ALY AK G+N++V+ Sbjct: 682 KALYFAKTNGKNRIVL 697 >UniRef50_C1ZLY6 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZLY6_PLALI Length = 650 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/182 (40%), Positives = 105/182 (57%), Gaps = 17/182 (9%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNEL---TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 R + A DPLT + NR FF+E+ V P V+ +D+DHFK VNDT+GH Sbjct: 336 RELQQQALHDPLTGVHNRK-FFDEVLLREVHRCVRAAQPLAVIFIDVDHFKNVNDTFGHQ 394 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT-- 390 GDQV+K V I +++R D LAR GGEEF VL++ + + LAERIRENVE+ Sbjct: 395 FGDQVLKRVAQIFSETVRVADTLARFGGEEFVVLVSQPSEKGVERLAERIRENVEKEAFR 454 Query: 391 -GDNPEYAIPQKVTISIGAVVT----QENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 G + P K+T+S+GA + E + + + +AD LYEAK GRN+ ++R V Sbjct: 455 FG-----STPVKITVSVGAAIAIPRRGETGIG-DRLIAVADECLYEAKRNGRNRTILRHV 508 Query: 446 VN 447 ++ Sbjct: 509 MD 510 >UniRef50_B6BHU7 Diguanylate cyclase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHU7_9PROT Length = 774 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 110/202 (54%), Gaps = 20/202 (9%) Query: 263 VMVIFMCHIFSALRVTKN-----------------IAHRDPLTNIFNRNYFFNELT--VQ 303 +M+IF +F LR+ K I+ D LT+++NR YF + + Sbjct: 573 IMLIFSSILFIILRINKKLKLEIRTRKETERKLQEISITDELTHLYNRRYFNKKFPQLIN 632 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEE 362 SA +K I+DID+FK NDT+GH GD+ ++ + + S+ R DD R+GGEE Sbjct: 633 SAKREKKHVSFAILDIDYFKLYNDTYGHISGDEALQKIAESMQSSLSRADDYCFRLGGEE 692 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIY 422 FG+L +D E++ L E++R+N+E L ++ Q VT S G VV N E+Y Sbjct: 693 FGILFKGLDKEQSLELIEQVRQNIENLKIEHANNTASQYVTSSFGLVVKDSAITNEEELY 752 Query: 423 RLADNALYEAKETGRNKVVVRD 444 R AD+ LY+AK+ GRN+V V D Sbjct: 753 READDLLYKAKDGGRNRVCVND 774 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 4/166 (2%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + + +A D LT + N F + L + A + P +++ D+DHFK VNDT+GHP+ Sbjct: 552 KTMETMATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAAILLCDVDHFKNVNDTYGHPI 611 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+V++ V ++ +S+R D+ AR GGEEF V+L D E A LAERIR++V L D+ Sbjct: 612 GDEVLRQVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLEGAMNLAERIRKDVAALVVDS 671 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 + P +VT+SIG ++A + + AD+ALY AKE+GRN+ Sbjct: 672 DKG--PFQVTMSIGIASFPDDATDRAVLIERADSALYLAKESGRNR 715 >UniRef50_D0SFS0 GGDEF family protein (Fragment) n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SFS0_ACIJO Length = 531 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/179 (43%), Positives = 109/179 (60%), Gaps = 14/179 (7%) Query: 279 KNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 KNIAH D LT + NR Y NE +++ Q + C+M++DIDHFK+VND +GH +GDQ Sbjct: 358 KNIAHLDSLTGVANR-YALNEYIKLLENQPTQFSETCLMVIDIDHFKQVNDVYGHLMGDQ 416 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV-ERLTGDN-- 393 VI+ V + ++IR DLL R GG+EF VL+ ++ ERA +AE+IR + E + DN Sbjct: 417 VIQFVAEKLKENIRTSDLLVRYGGDEFIVLIENVGMERALKIAEKIRSEIYEAKSVDNVR 476 Query: 394 -PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 P+ KV+ISIG + A + + AD AL++AKE G+NKVV V ES Sbjct: 477 CPDL----KVSISIGVAI---GATSWMALLEKADRALFQAKEQGKNKVVAYSVDEVNES 528 >UniRef50_C6D6R5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6R5_PAESJ Length = 538 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 244 YSVSTWYI-SRTIEVVSKLTVMVIFM--CHIFSALRVTKNIAHRDPLTNIFNRNYF--FN 298 Y + + +I R SKL VM+ + LRV +A+ D LT IFNR +F + Sbjct: 322 YQIRSSFIRKRRGPETSKLIVMIDITERVRLQEQLRV---LAYHDGLTGIFNRLHFIHLS 378 Query: 299 ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARV 358 E + ++ Q P +++ DIDHFK++ND +GH VGD+ + VV+I + +RP+D+ R Sbjct: 379 EALLHQSAEQDEPLALLLFDIDHFKQINDAYGHDVGDRALLHVVDICRQLLRPEDVFGRY 438 Query: 359 GGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT----QEN 414 GGEEF V + + E A+ A+RIR + T P VT S G + +E Sbjct: 439 GGEEFVVAMPGLSHEEAETAAQRIRSEIAAQTIAAATSEPPLSVTASFGVAMAGAGCKEA 498 Query: 415 ALNPNEIYRLADNALYEAKETGRNKV 440 N++ + ADNALYEAK +GRN V Sbjct: 499 GGGINQLLKAADNALYEAKNSGRNTV 524 >UniRef50_B6BJ09 Two-component response regulator n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BJ09_9PROT Length = 427 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 12/175 (6%) Query: 276 RVTKNIAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + TK++A++D LT +NR YFF ++ + + V +DID FK VNDT+GH V Sbjct: 260 KQTKDLANKDFLTGSYNRRYFFESSKAILNKNQRKDKEVAVATLDIDLFKNVNDTYGHDV 319 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD I+ + I+ K++R DL+AR GGEE+ +LL DI E K L E+IR N E N Sbjct: 320 GDVAIQEIAIILDKTLRTSDLVARFGGEEYCILLEDISLEDTKHLFEKIRSNFE-----N 374 Query: 394 PEYAIPQ---KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 E + K T+S+G + +++ N + +++D ALYEAK+TGRNKV++ ++ Sbjct: 375 NEIKVDDISLKYTVSLGIAYGK--SIDINALLKVSDEALYEAKDTGRNKVIIHNI 427 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/166 (43%), Positives = 110/166 (66%), Gaps = 12/166 (7%) Query: 280 NIAHRDPLTNIFNR---NYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 N+A +D LTNIFNR + F ++ T++S + +MI DIDHFK+VND +GH VGD+ Sbjct: 328 NLASKDSLTNIFNRRIIDEFISKETIKSKRYNNSLALIMI-DIDHFKEVNDKYGHQVGDE 386 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 VI ++V+II K+IR D+ R GGEEF +LL + + +A +A+ IR+ V+ D Sbjct: 387 VILSLVDIISKNIRESDIFGRWGGEEFIILLPETNLNQATIVAQNIRKKVQEYRFDK--- 443 Query: 397 AIPQKVTISIGAVVTQENALNPNEIY-RLADNALYEAKETGRNKVV 441 + QK TIS+G V++ N+ + + ++ + D+ALY+AK TGRN+VV Sbjct: 444 -VGQK-TISLG--VSEFNSNDDSTVFIKRVDDALYKAKATGRNRVV 485 >UniRef50_B8GMH9 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMH9_THISH Length = 370 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 15/179 (8%) Query: 275 LRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 LR + + DPLT + NR YF +L + Q A ++ P + +DID FK +ND GHP Sbjct: 183 LRRLRELGLTDPLTGLRNRRYFDEQLPMECQRARREQGPLACLFVDIDRFKSINDVHGHP 242 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT-- 390 GDQ I+ V I +RP DLLAR GGEEF +LL+ +D + +AER+R+ V + Sbjct: 243 AGDQAIREVAQRISAHVRPFDLLARYGGEEFVILLSRLDAAATREVAERVRQAVAQRPVS 302 Query: 391 -GDNPEYAIPQKVTISIGAVVTQ--ENALNPNEIYR----LADNALYEAKETGRNKVVV 442 D PE ++++S+G V ++ P + R AD AL EAK++GRN+VV+ Sbjct: 303 LADGPEL----ELSVSLGGAVCARWDSRDEPEQTGRRLMEAADLALLEAKQSGRNRVVM 357 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 2/171 (1%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPV 333 R + A DPLT I+NR +F + Q + + P ++++D+DHFK+ NDT GH Sbjct: 150 RKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQG 209 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+ + + + I +RP D+ AR GGEEF V+L D D + +AER+R VE L + Sbjct: 210 GDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIKD 269 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 E +TIS+G T + +E+ AD ALY+AK GRN+VVV D Sbjct: 270 DEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVVGD 320 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 4/156 (2%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKTPY--CVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT I+NR YF L + A+A+K Y + IMDIDHFK+ NDT+GH GD+V+K + Sbjct: 391 DSLTGIYNRLYFQERLREEFANAKKENYDLSLAIMDIDHFKRFNDTFGHLFGDKVLKHIA 450 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 +++ KS+R D++AR GGEEF +LL + A ER+R V + T + + V Sbjct: 451 HLMKKSLRSGDIIARYGGEEFVILLPRTSVKEAYDKVERLRNIVAKTTIKDE--LVEASV 508 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 T+S G E A +E+ + ADNALY+AKE+GRN Sbjct: 509 TVSFGVSSYPEFANTESELLKTADNALYDAKESGRN 544 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 9/162 (5%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT +FN F+N L + + Q+T P ++++DIDHFKKVNDT+GH GD V++ + Sbjct: 232 DPLTGLFNHGQFYNLLAEELSRHQRTGRPLSLLMLDIDHFKKVNDTYGHRAGDAVLQQLS 291 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL---TGDNPEYAIP 399 ++ K R D + R GGEE ++L + D E A+ AER+R +VE+ T E Sbjct: 292 GLLKKQARAIDRVCRYGGEELALILPETDREAARQTAERLRRHVEKCCFATCGQQEIG-- 349 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 VT+SIGA + A++ + AD ALY AK GRN+V Sbjct: 350 --VTVSIGAATCPDAAISAETLVNAADRALYAAKRAGRNRVC 389 >UniRef50_A1S9Y5 Diguanylate cyclase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9Y5_SHEAM Length = 577 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 4/167 (2%) Query: 279 KNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K A+ DP+T++FNR YF + L + A A + ++I+DID+FK +NDT+GH VGD Sbjct: 407 KRQANTDPMTHLFNRRYFDVTSPLLLTEAKATGAHWTLLIIDIDNFKSINDTYGHHVGDL 466 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 VI ++ ++ RP D+ R GG+EF VLL + + + A +AERIR N ERL E Sbjct: 467 VIIEFAAVLKQNQRPQDIACRFGGDEF-VLLLNCNLDNATRIAERIRANTERLPITTQE- 524 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 T+SIG +A N E + AD ALYE+K GRNKVV R Sbjct: 525 GEKLHFTVSIGVHPVSSSADNMQEALQGADAALYESKGLGRNKVVSR 571 >UniRef50_Q2C9S2 Two component diguanylate cyclase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2C9S2_9RHOB Length = 466 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 3/158 (1%) Query: 285 DPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT + NR Y L Q+A AQ + +M++D+DHFK +ND WGHP GD V+ + Sbjct: 300 DPLTGLHNRRYALPHLEHMAQTACAQGSGLALMVLDVDHFKTINDRWGHPSGDAVLCEIA 359 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + ++RP DLLAR+GGEEF V + D+ A+ AER+ +E P +V Sbjct: 360 RRLRDNVRPGDLLARIGGEEFVVAMADVSDGLARHTAERLCNVIEEAPFPLPGRTTALQV 419 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 T+SIG V E E++ AD ALY AK GRN V Sbjct: 420 TVSIG-VAMAEGMTTSEELFNSADAALYRAKTAGRNTV 456 >UniRef50_B6BGH7 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGH7_9PROT Length = 428 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 128/237 (54%), Gaps = 30/237 (12%) Query: 219 DIWNGVTV-IAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMC-------- 269 ++WN +T ++ + N++ SR W SR ++ V++ F Sbjct: 209 ELWNTITNNKSWTGEVENVTSSGESR-----WVQSRITPILDDDGVLMEFNAVYQDITNK 263 Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK---TPYCVMIMDIDHFKKVN 326 + L VT DPLT I+NR YF +EL A Q+ T + ++I DIDHFK +N Sbjct: 264 KLLEVLYVT------DPLTQIYNRTYF-DELMTSIALHQRKADTNFIILITDIDHFKSIN 316 Query: 327 DTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 DT+GH VGD+ +K V +I S+R +D++AR GGEEF ++L + + + A+ +AE++R N+ Sbjct: 317 DTYGHQVGDEALKDVARVIKDSLRENDVVARWGGEEFVIMLKNTELDEAQMIAEKLRANI 376 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 E+ N I +I + E+ N ++ ADNALY+AKE+GRN VV Sbjct: 377 EKTKIQN---VIDITTSIGLTKYYVGEDT---NLTFKRADNALYKAKESGRNMVVTE 427 >UniRef50_B9L7B8 Ggdef domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L7B8_NAUPA Length = 347 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 6/167 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFN---ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + +A D LT IFNR FF +L +Q+ +KT +M MDIDHFKK+NDT+GH GD Sbjct: 181 EKLALIDELTQIFNRRAFFKIAQKLLMQAKREEKTLTLIM-MDIDHFKKINDTYGHKAGD 239 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 V+K+ V+ I K IR +DL AR+GGEEF +LL D + A+ ++I + + E Sbjct: 240 IVLKSFVSEIQKIIRQNDLFARIGGEEFVLLLYDTSEKDVDAIVDKILNAIRNMHISINE 299 Query: 396 YAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAKETGRNKVV 441 + Q +T+S+G + Q N N + AD ALY AK+TGRNK V Sbjct: 300 NTMIQ-ITVSLGIYIIQSYNEDNIQQALINADKALYVAKKTGRNKAV 345 >UniRef50_D0SE10 Diguanylate cyclase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SE10_ACIJO Length = 389 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 94/161 (58%), Gaps = 14/161 (8%) Query: 284 RDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVN 343 RDPLT++FN+ F + K PY +++ DIDHFKK+NDT+GH VGDQ+++ VV Sbjct: 226 RDPLTHLFNQRGFNEAAKRKLHQLSKQPYFLLMCDIDHFKKINDTYGHLVGDQILQQVVE 285 Query: 344 IIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV--ERLTGDNPEYAIPQK 401 IIG+++R DL+ R GGEEF VLL D A +A RIR + RL+ N Sbjct: 286 IIGQNVRTHDLVGRFGGEEFIVLLQIDDPTLAYNIANRIRLGIADARLSSKNI------A 339 Query: 402 VTISIGAVVTQENALNPNEIYRL--ADNALYEAKETGRNKV 440 VT S G + PN Y + AD LY+AK +GRN++ Sbjct: 340 VTASFGLAAVHQ----PNLKYAIHDADQLLYQAKHSGRNQI 376 >UniRef50_Q31EI0 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EI0_THICR Length = 620 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 98/158 (62%), Gaps = 7/158 (4%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT ++NR+YF L + Q+ +P+ + MDIDHFK +NDT+GH VGD V+ ++ Sbjct: 460 DELTGVYNRHYFNRTLEQEIKRHQRYQSPFSMAFMDIDHFKMINDTYGHDVGDAVLVSLA 519 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 I +R D+ RVGGEEF +++ + E A ++ERIR VE ++ + +P+K+ Sbjct: 520 KNISSLLRSTDVFCRVGGEEFVIMMPETSLENALIISERIRSTVEGISSKD----VPEKI 575 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 TIS+G +V + N Y+ AD ALY+AKE GRN++ Sbjct: 576 TISMG-LVELNSWDNVQSFYKRADEALYKAKENGRNRI 612 >UniRef50_C1TN20 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN20_9BACT Length = 499 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 136/254 (53%), Gaps = 16/254 (6%) Query: 198 IMIFMWLTLLSVNLYFNGLRYDIWN-----GVTVIAFCAVLYNISLLFMSRYSVSTWYIS 252 ++ M +LS+NL + +D WN G+ FC+++ + +L S V+ W++ Sbjct: 240 LLGIMQKAVLSLNLKESSRIFDRWNPLASKGIDRGLFCSIVVLLIVLIASASGVAYWFVR 299 Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR---NYFFNELTVQSASAQK 309 + ++ + + + R + ++ D LT I NR F N V A + Sbjct: 300 KNDQLRALNRELAKAKAALEEGNRRLELLSKMDHLTGIANRFGIEAFLNR-AVHKAR-RG 357 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 TP+CV I D+DHFK+VND +GH +GD+V+ + I ++R DL+ R GGEEF ++ D Sbjct: 358 TPFCVAIGDVDHFKRVNDDYGHQIGDRVLVRLAEIFVDAVRAVDLVGRWGGEEFIIVFDD 417 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNA 428 + +A+RIR R+ +N ++ + + +T+S G V E L+ N++ R AD+A Sbjct: 418 MVERDLFPVADRIR----RIVSEN-DFGLGRPLTVSFGGVAFPAEGDLSLNDLLRTADDA 472 Query: 429 LYEAKETGRNKVVV 442 LY+AKE GRN V + Sbjct: 473 LYKAKEDGRNMVAI 486 >UniRef50_C0QSI7 Diguanylate cyclase with GAF sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QSI7_PERMH Length = 423 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/183 (39%), Positives = 110/183 (60%), Gaps = 7/183 (3%) Query: 265 VIFMCHIFSALRVTKNI--AHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDID 320 V+ M IF+ +NI + RDPLT++ NR T++ + +TP+ + ++D+D Sbjct: 243 VLSMISIFTVAIARENIEKSRRDPLTDLLNRTVMDMIIARTIEISKISETPFSIAMLDVD 302 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 +FK++NDT+GH VGD V+K + II KS+R D + R GGEEF VLL D++ A + E Sbjct: 303 NFKRINDTYGHIVGDCVLKEIAKIIKKSLRKSDFVFRYGGEEFLVLLPSTDSKHAYRIME 362 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNALYEAKETGRNK 439 R R+N+E+ + + I VTISIG + V + LN +I + AD LY AK+ G+N Sbjct: 363 RTRKNIEKASIKCDSHKI--NVTISIGLITVYPDETLNIKQIIQKADQNLYTAKKKGKNL 420 Query: 440 VVV 442 V+ Sbjct: 421 VIA 423 >UniRef50_A6Q2P1 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P1_NITSB Length = 486 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 20/191 (10%) Query: 262 TVMVIFMCHI---FSALRVT-KNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVM 315 +++++F+ I F+ R+ + +A D LT +FNR+ F E+ ++ + K P V+ Sbjct: 304 SILILFLFTILFYFAISRIKFEEMATVDKLTGLFNRHKFQEIAEIEIKRSHRHKRPLSVI 363 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 + DIDHFKK+NDT+GH +GD V++ + II ++IR D R GGEEF +L + D ++A Sbjct: 364 LFDIDHFKKINDTYGHDIGDVVLRELAKIIKQNIRKYDYAIRWGGEEFLILTPETDEKQA 423 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE----IYRLADNALYE 431 A+AE++R+ VE T PE KVTIS+G +++PNE + ADNALY Sbjct: 424 FAMAEKLRKAVESHTF--PEVG---KVTISLGVA-----SVDPNESIDQAIKKADNALYG 473 Query: 432 AKETGRNKVVV 442 +K GRNK V Sbjct: 474 SKLGGRNKTTV 484 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 103/174 (59%), Gaps = 9/174 (5%) Query: 275 LRVTKNI---AHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTW 329 LRV K + A++D LT ++NR YFF+ ++ + ++++D+DHFK +ND + Sbjct: 75 LRVQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLMLDVDHFKSINDRF 134 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GHPVGD+V++ V N+I +R +D+ AR GGEEF LL D + AKA+AERIR +E Sbjct: 135 GHPVGDRVLQRVSNVIKGFMRQEDMCARYGGEEFICLLPDTNAAGAKAVAERIRLGMEHQ 194 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 A +++SIGA N N + AD ALYEAK+ GRN+ V + Sbjct: 195 A---FLKARGLSLSVSIGATTMSAND-NLETLIERADQALYEAKDGGRNRAVFK 244 >UniRef50_B7RWX6 GGDEF domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWX6_9GAMM Length = 390 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 13/169 (7%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 ++A DPLT + NR + L + A A++ P +++DID+FK+VND++GH GD Sbjct: 213 SHLATEDPLTRLLNRRGLQDALRISIAHARRHGLPTSAIMIDIDYFKRVNDSFGHETGDH 272 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP-- 394 VI+ V ++I + R D++AR GGEEF ++L + D+ A+ LAER+R+ V G+ P Sbjct: 273 VIQLVASMIERLCRESDVVARTGGEEFLIILANTDSASARILAERVRQAV----GERPLV 328 Query: 395 --EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 ++ IP VTIS+G V + N +E+ + AD A+Y AK GRN+V Sbjct: 329 VDQHRIP--VTISLG-VASASGEFNLDELSQEADQAMYLAKRGGRNRVA 374 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 114/220 (51%), Gaps = 21/220 (9%) Query: 223 GVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIA 282 +T +AFCA F+ R +T +SR ++ + +L + I S N A Sbjct: 159 ALTSLAFCA--------FVVR---ATRELSRALQSLLRLRRELEIQHSIAS------NAA 201 Query: 283 HRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 D LT + NR F + A ++ P C ++ DIDHFK++NDT GH GD+V++ Sbjct: 202 RTDDLTGVNNRRAFNEKAETMFAYTRRYGVPLCALLFDIDHFKQINDTHGHAAGDKVLQA 261 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 VV I ++R DL R+GGEEFGVLL + + A +AERIR V+ + P Sbjct: 262 VVRQIKSALREADLCGRLGGEEFGVLLAGTNMQEAVQIAERIRLAVQAI--KEPVNDTTL 319 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +VTIS+G + + + + AD A+Y AK GRN+V Sbjct: 320 QVTISVGVAEADSACADVSTLLKQADAAMYRAKSNGRNQV 359 >UniRef50_C1YQA6 Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Streptosporangineae RepID=C1YQA6_NOCDA Length = 458 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/164 (45%), Positives = 95/164 (57%), Gaps = 10/164 (6%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A DP T + N + E +V+ A A+ + V+I+DIDHFK+VND GH GDQV+ Sbjct: 263 ARTDPKTGLLNAPTWEQEASVEIARARSSRGRAAVLIIDIDHFKRVNDNHGHLFGDQVLL 322 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA-- 397 V I + +R DLL R GGEEF VLL DT A AER+R V R+ E A Sbjct: 323 GVATTIAQQLRQSDLLGRFGGEEFVVLLPGSDTAEAWRAAERLRSQVGRM-----EIAVD 377 Query: 398 -IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +P +TISIGA V ++ + E+ AD ALY AKETGRN+V Sbjct: 378 DVPVSITISIGAAVIGDHGNDLVELLTAADLALYRAKETGRNRV 421 >UniRef50_A3DDM3 Diguanylate cyclase n=3 Tax=Clostridium thermocellum RepID=A3DDM3_CLOTH Length = 1826 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 10/163 (6%) Query: 281 IAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 I+ D LT + R +F N E ++ AS +K+ ++++DID FK +ND +GH GD+++ Sbjct: 1484 ISTTDKLTGTYTRKFFENAIETQLKKASREKSQMSIIMIDIDKFKSINDNYGHQKGDEIL 1543 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE--RLTGDNPEY 396 V NI+ K+IRP D+ R GGEEF ++L D A+ALAER+R VE RL G Sbjct: 1544 SKVGNILLKNIRPTDICCRYGGEEFVIILPDTGPSEAEALAERLRSTVEKARLMGQG--- 1600 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 +TIS+G ++ NE+ AD ALY AKE+GRN+ Sbjct: 1601 ---NSLTISLGISCYPKHGSIRNELIEKADQALYHAKESGRNR 1640 >UniRef50_Q7CYR0 GGDEF family protein n=4 Tax=Rhizobium/Agrobacterium group RepID=Q7CYR0_AGRT5 Length = 356 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 9/168 (5%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIM-DIDHFKKVNDTWGHPVGDQV 337 K IA+ D LT + NR F + L S+ Y +++ DIDHFK++NDT+GHPVGD++ Sbjct: 173 KRIANTDSLTRLSNRRAFDDRLASVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKI 232 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE----RLTGDN 393 + TV ++I ++R D +AR GGEEF ++L E + ERIR ++E R + Sbjct: 233 LATVASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVMCERIRLSLESTPFRNSRSG 292 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 +Y VTISIG + A NP+E+Y AD ALY AKETGRN+ V Sbjct: 293 ADYGT---VTISIG-FASAARASNPSELYGHADTALYHAKETGRNRSV 336 >UniRef50_Q2SHG3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHG3_HAHCH Length = 555 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 4/171 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + IA RD LT ++NR +F N L + A++ + ++++DIDHFK +NDT GHP GD+ Sbjct: 377 REIAARDSLTGLYNRRFFQNRLNYEFNRAKRYGSGLTLVLLDIDHFKIINDTKGHPAGDE 436 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ + + + +S+R DL+AR+GGEEF ++L + E K +R+R + L + Sbjct: 437 VLIRLSSFLSQSLRSSDLIARIGGEEFCIILPEHLDEGVKTFIDRLRIEISLLDFQHEGE 496 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 A +VT S G + + +P +I + AD ALY+AK TGRN++V VN Sbjct: 497 AF--QVTCSFGVAEYRNESSHPKDILKKADEALYQAKRTGRNRIVYESAVN 545 >UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ19_ACIBL Length = 369 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 101/165 (61%), Gaps = 6/165 (3%) Query: 282 AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A D LT + R YF EL ++ A ++TP ++++D+DHFK +NDT+GH VGDQV++ Sbjct: 195 AFTDFLTGLKTRGYFEQQLELEIKRAERKRTPIAMLMLDLDHFKTLNDTYGHHVGDQVLR 254 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT--GDNPEYA 397 V ++ K +R D AR GGEEF ++L + +T A +A RIR VE+ +P Sbjct: 255 DVSAVLMKDLREVDTAARYGGEEFVIVLPETNTTGAMQVANRIRRGVEQAKFFAGSPRQV 314 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +++TISIG + ++A + E+ AD ALY+AK GRN+VV Sbjct: 315 --ERLTISIGIAIYDQDAQSKRELIEAADAALYQAKGQGRNQVVT 357 >UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W619 RepID=B1J820_PSEPW Length = 532 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 14/207 (6%) Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA 305 + WY+ + L + F LR A D LT + NR +L + + Sbjct: 333 IDAWYVE-VAAIRRALLTGEQLLQEKFGKLR---QQAQSDALTGLANRRAM--QLALDAL 386 Query: 306 SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGV 365 + V+ +DIDHFK+VNDT+GH GD+V+K + ++ + R DDL RVGGEEF + Sbjct: 387 MQSSRAFAVLALDIDHFKRVNDTFGHDAGDEVLKHLAELLRHNSRQDDLPCRVGGEEFTM 446 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLA 425 LL D A+ +AERIR VE+ D+P K+T+SIG + + + + A Sbjct: 447 LLPDTGLADARRIAERIRSAVEQ--ADSPHVG---KLTVSIGVACRRPDTQQAGSVLKQA 501 Query: 426 DNALYEAKETGRNKVVVRDVVNFCESP 452 D LY+AK GRN+V +V++ SP Sbjct: 502 DEQLYKAKHNGRNRV---EVLDLSPSP 525 >UniRef50_A8MEQ5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEQ5_ALKOO Length = 541 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 99/164 (60%), Gaps = 8/164 (4%) Query: 280 NIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 NIA RD LT ++NR++ + L ++ A A+ P + I+D+D FK VNDTWGHPVGD+ Sbjct: 380 NIAVRDELTGLYNRHFLVSYLKNEIEKAEAEDQPMTMAILDLDQFKLVNDTWGHPVGDEQ 439 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K I + IR DLL R GGEE +++ + + AK + E+IR +E N +Y Sbjct: 440 LKHTAKTILRVIRSTDLLVRYGGEELVIIMEKTNIDDAKIVLEKIRMAIE-----NNQYP 494 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 I + T+SIGA ++ L + Y+ AD ALY AK GRN+V+ Sbjct: 495 ITGRQTVSIGAAERAKSELFVD-WYKRADQALYHAKNRGRNRVI 537 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 9/192 (4%) Query: 256 EVVSKLTVMVIFMCHIFSALRV---TKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--T 310 + V +L V+ + R+ T+ +A D LT + N F L AQ+ Sbjct: 563 DAVQQLLVISMHAAQSIDRARLFDQTERLATTDGLTGLTNHRTFQERLDAHLGQAQRYGK 622 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 +++ DIDHFK VNDT+GHPVGDQV++ V + ++ R D++AR GGEEF +++ + Sbjct: 623 RTSLLLCDIDHFKSVNDTYGHPVGDQVLRGVARTLARAARGTDVVARYGGEEFAIVMPET 682 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIG-AVVTQENALNPNEIYRLADNAL 429 DT A +AERIRE V +L + + P KVT+S+G A + A P I R AD L Sbjct: 683 DTGGAMVIAERIREKVGQLVFETEQG--PLKVTLSLGVATFPDDGAQKPALIER-ADACL 739 Query: 430 YEAKETGRNKVV 441 Y AK GRN+ V Sbjct: 740 YHAKRHGRNQSV 751 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 4/166 (2%) Query: 279 KNIAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A D LT + NR F +E + +S T C+M++D DHFK++ND +GH GD+ Sbjct: 297 EELAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQAGDK 356 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+K V + + +RP DLL R+GGEEF +LL + + A +AER+R+++E + Sbjct: 357 VLKDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVIGSK 416 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 I K+TISIG Q + AD LY+AK+ GRN+VVV Sbjct: 417 RI--KLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNRVVV 460 >UniRef50_B3E6Q3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Q3_GEOLS Length = 859 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 118/198 (59%), Gaps = 12/198 (6%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNI---AHRDPLTNIFNRNYFFNELTVQSASAQK 309 R++ + S LT ++ + I + + TK++ A RDPLTN+FN+ F+ L + A++ Sbjct: 408 RSLVINSILTTLLNVIGSIKAIYKYTKDLEYYATRDPLTNLFNQRVFWELLGYEIGRAER 467 Query: 310 --TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 + V+++D+D+FK +NDT+GH VGD+ + + + I S+R D+LAR GG+EF ++L Sbjct: 468 HHQQFGVLVIDLDNFKHINDTYGHLVGDKYLVQIADTIHASLRLGDILARYGGDEFAIVL 527 Query: 368 TDIDTERAKALAERIRENVERL---TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 D D E+ +A RIRE +E + T D + + T SIG V ++A +++ Sbjct: 528 PDADHEQVHMVANRIREAMEAMTLVTADGSKI----RGTASIGYAVCPDHATTAKDLFLF 583 Query: 425 ADNALYEAKETGRNKVVV 442 ADN Y+AK G+N +VV Sbjct: 584 ADNMTYKAKSLGKNCIVV 601 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 96/165 (58%), Gaps = 3/165 (1%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A DPLT + NR +T + A + + ++++D+DHFKKVNDT+GH VGD Sbjct: 325 EQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVGDD 384 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V++ V ++G +IR D+ AR GGEEF VLL + D A A AERIR +E Sbjct: 385 VLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARDSM 444 Query: 397 AIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 A P K+T SIG AV N +++ AD ALY AK GRN+V Sbjct: 445 AEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRV 489 >UniRef50_B2V6C7 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sulfurihydrogenibium RepID=B2V6C7_SULSY Length = 638 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 33/228 (14%) Query: 235 NISLLFMSRYSVST-WYISRTIEVVSKLTVMVIFM------CHIFSALRVT--KNIAHRD 285 NI L + YS+ YIS+ I V+ ++ IF IF AL+ + K + D Sbjct: 174 NIDYLLVIDYSIEKISYISQLISVLKTFILLFIFAGLVIINVIIFLALKASYYKQRSFTD 233 Query: 286 PLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNII 345 LT ++NRNY + + + Y + ++DID+FKK+NDT+GH +GD+V+K+V N + Sbjct: 234 NLTGLYNRNYLQHIMDFK--------YIIALIDIDYFKKINDTYGHAIGDKVLKSVANTM 285 Query: 346 GKSIRPDDLLARVGGEEFGVLLTDIDTERAKA----LAERIRENVERLT-----GDNPEY 396 K R +D+ R GGEEF +LL +D ++ L ERIR N+E+L GD Sbjct: 286 KKLTREEDIFIRYGGEEF-LLLAKVDRKQDIQVMLNLFERIRSNIEKLKIPITDGDYI-- 342 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 K TISIG + N NE + AD ALY+AK GRN++ + D Sbjct: 343 ----KTTISIGVYLNTNKDKNINEAIKKADVALYKAKSKGRNRIEIYD 386 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 7/161 (4%) Query: 284 RDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 RDPLT ++NR Y T + A Q+ P ++++D+DHFK+ NDT+GH +GD +++ + Sbjct: 385 RDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYGHALGDTLLRRL 444 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL--TGDNPEYAIP 399 + + R +D++ R GGEEF VLL + D +A+A AE +R +VE L T ++ E+ Sbjct: 445 ATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTSNDAEFVA- 503 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +TISIG ++A P ++ AD ALY AK GRN+V Sbjct: 504 --LTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRV 542 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 12/172 (6%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A RDPLT +NR YF L+ ++A+ + P + +D+DHFK VND +GH GD Sbjct: 335 QEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQPLSLGFLDLDHFKMVNDRYGHQAGDV 394 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN--- 393 V+ V I +R DD LAR GGEEF +LL + + E A+ + ERIR ++E T ++ Sbjct: 395 VLAGVAKAISSRLRGDDFLARYGGEEFVLLLPNTNLELAQRILERIRAHIE--TEEHTVA 452 Query: 394 PEYAIPQKVTISIGAVVTQENALNPN---EIYRLADNALYEAKETGRNKVVV 442 PE+ I ++T+S GA + + N ++ R AD ALY AK GRN+V V Sbjct: 453 PEHMI--RITLSAGAAAHMDGSRISNKLDDLIRAADRALYLAKRQGRNRVEV 502 >UniRef50_B3PE85 Putative membrane protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PE85_CELJU Length = 380 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/159 (44%), Positives = 91/159 (57%), Gaps = 7/159 (4%) Query: 283 HRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 +RD LT++ NR FF S + Y ++ DIDHFK VND WGH GD+V++ V Sbjct: 225 YRDSLTHLLNRRGFFEAAKDFMGSDATSRYFLLTCDIDHFKNVNDNWGHLAGDKVLQAVS 284 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY-AIPQK 401 I K++R DL+AR GGEEF + L ID A+ +AERIRE +E N Y AIP Sbjct: 285 KAIIKNVRKGDLVARFGGEEFVIFLRSIDINDARKIAERIREEIE-----NTTYSAIPIC 339 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +T S G V N + I R AD LY AK+ GRN+V Sbjct: 340 ITASFGLVDIVPNQDLVSAIDR-ADALLYNAKQNGRNQV 377 >UniRef50_A4C957 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C957_9GAMM Length = 639 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 109/188 (57%), Gaps = 13/188 (6%) Query: 262 TVMVIFMCHIFSALRVTKNI---AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMI 316 ++++ ++ ++V+K + A+ D LT + NR Y F+ ++ + A ++ P ++I Sbjct: 453 AILILLSVFVYRQVKVSKRLNRLANTDSLTQLANRRYTFHFAKIVFKEAQIEQKPLSIII 512 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 DIDHFK++ND +GHP GD+V+ V + +R DLL R+GGEEF V+L + +A Sbjct: 513 FDIDHFKRINDNYGHPFGDEVLMAVADKAQAGLREPDLLGRIGGEEFMVVLKNTPINQAV 572 Query: 377 ALAERIRENVERLTGDNPEYAIPQ---KVTISIGAVVTQENALNPNEIYRLADNALYEAK 433 +AER+RE + +L+ +A Q KVT S G + + +++ AD ALY AK Sbjct: 573 EIAERMRELIAQLS-----FAAAQQQVKVTASFGVAQFNVDVDDFGSLFQHADEALYRAK 627 Query: 434 ETGRNKVV 441 GRN+VV Sbjct: 628 NAGRNQVV 635 >UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FP0_SACD2 Length = 498 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 10/165 (6%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQ---KTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 +A RDPLT+ +NR L + A AQ K C+M +DIDHFK+VNDT+GH VGD V Sbjct: 329 LASRDPLTDCYNRRAMRERLDDEFAKAQNSGKDLVCIM-LDIDHFKRVNDTYGHGVGDVV 387 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 IK V ++ +++R D++AR GGEEF V+L + E+ K +A+R R +E + Sbjct: 388 IKMVAQVVKEAVRDSDIVARFGGEEFCVVLPNATVEQVKIIAKRCRMTIE------TQNC 441 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 KVT S G A +PN++ AD ALY +K+ GRN V V Sbjct: 442 GGVKVTSSFGIAALSLGAKSPNDLIHQADEALYNSKQNGRNMVSV 486 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 7/200 (3%) Query: 247 STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QS 304 ST+ +S T ++ L + A ++ A D LT + NR FF V + Sbjct: 194 STFVVSATRKLSDALEKAFRLTRQMERAHTISTRAAQTDELTGLMNRRAFFEHAQVLYEQ 253 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 + P C ++MD+DHFK++NDT+GH GDQV++ + +I S R D+ R+GGEEF Sbjct: 254 CRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIGGVISASFRQADVYGRLGGEEFA 313 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 VLL + + A+ +AE++ + + L + P + + + S+G T + + + Sbjct: 314 VLLPNTSLDTARTIAEQLVKAISGLASE-PVHGL----SASLGVASTHTQDQDLHGLMNT 368 Query: 425 ADNALYEAKETGRNKVVVRD 444 AD ALY AK GRN+V V + Sbjct: 369 ADKALYRAKAQGRNQVAVAE 388 >UniRef50_A4XZM4 Diguanylate cyclase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XZM4_PSEMY Length = 366 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 11/191 (5%) Query: 263 VMVIFMCHIFSALRVT-----KNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVM 315 V+++ HI+ LR+ + +A D LT + +R F + L ++Q A ++ Sbjct: 166 VLILVFVHIYDGLRMQAHEELERLAQTDSLTGVASRGSFQHALQRSIQEAERSSGHLVLV 225 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++D+DHFK+VND WGH GD ++ + ++ + +R D L R+GGEEFG+LL D+ A Sbjct: 226 LLDVDHFKEVNDRWGHEAGDMALQHICQMLQQRLRVTDFLGRLGGEEFGLLLRHTDSTGA 285 Query: 376 KALAERIRENVERLTGDNPEY-AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 L E +R +LT EY P ++ + G E+ + E+YR AD LY K+ Sbjct: 286 GPLVETLR---RQLTERPLEYHGQPIALSATFGLAAWPEDGRSAAELYRSADRRLYRGKQ 342 Query: 435 TGRNKVVVRDV 445 GRN++V D+ Sbjct: 343 RGRNQLVSSDL 353 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 104/176 (59%), Gaps = 9/176 (5%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + + RDPLT+++NR + LTV+ ++ P +M++DIDHFK++NDT+GH GD Sbjct: 330 REASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLLDIDHFKRINDTFGHDSGDL 389 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ V +I +R D+LAR GGEEF + + D + A LAE+IR ++ + + Sbjct: 390 VLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAVLAEKIRSSIAMFS-----F 444 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 VTIS+G + E+ + N + + AD ALY AKE GRN+ VVR + C +P Sbjct: 445 PTVGAVTISVG-ISLLESKDDINALIKRADTALYAAKEMGRNR-VVRSTEDGCPNP 498 >UniRef50_A0L7Q0 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7Q0_MAGSM Length = 555 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 104/172 (60%), Gaps = 9/172 (5%) Query: 275 LRVTKNIAHRDPLTNIFNRN--YFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 +R +++ RD LT ++N F + + SAS + + C ++D+D+FKKVNDT+GH Sbjct: 386 MRTLRSLMIRDSLTGLYNHTTTKHFLDSEIASASRRNSTTCFAMIDLDYFKKVNDTYGHA 445 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT-- 390 +GDQV+ + ++ + +R D++ R GGEEF V+LTDID ERAKA+ +++RE+ R+ Sbjct: 446 MGDQVLVALSRLLQQRVRQSDVVGRYGGEEFAVVLTDIDLERAKAILDQLREDFARVKFF 505 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + E+ + + A E AL EI AD ALY+AK GRN+VV Sbjct: 506 ANGIEFTC--SFSCGVAAFPRLETAL---EIGEAADKALYQAKREGRNQVVA 552 >UniRef50_Q2BQS0 GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQS0_9GAMM Length = 314 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 116/203 (57%), Gaps = 10/203 (4%) Query: 247 STWYISRTIEVVSK---LTVMVIFMCHIFSALRVT---KNIAHRDPLTNIFNRNYFFNEL 300 S WY R + V + + ++ +I R+ K++A +DP+T +NR +F + Sbjct: 112 SHWYEGRVVPVEGENGEIAAVIWLAINITEKKRLEQRLKDLAEKDPMTGAYNRRFFRESI 171 Query: 301 TVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARV 358 A+ ++ T Y + +DID+FKKVND +GH VGD VI +V I + +R DLL+R Sbjct: 172 DQHYATFKRYGTTYSLAFIDIDYFKKVNDQFGHDVGDGVICHLVTHIQEQLRTTDLLSRF 231 Query: 359 GGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNP 418 GGEEF VL I+ + A +AER+R +E + + +P V+I I V ++ ++ Sbjct: 232 GGEEFVVLFPHINLDEACLVAERLRATIEMTPYKSINHKVPFTVSIGISEVRAEDESV-- 289 Query: 419 NEIYRLADNALYEAKETGRNKVV 441 +I + AD+ALY++K +GRNKV Sbjct: 290 EDILKRADSALYQSKSSGRNKVT 312 >UniRef50_P54595 Uncharacterized protein yhcK n=2 Tax=Bacillus subtilis group RepID=YHCK_BACSU Length = 359 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/165 (42%), Positives = 91/165 (55%), Gaps = 10/165 (6%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTP---YCVMIMDIDHFKKVNDTWGHPVGDQVI 338 AH D LT ++NR F A TP + ++ MDIDHFK +ND +GH GDQV+ Sbjct: 192 AHFDFLTGVYNRRKFEETTKALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEGDQVL 251 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP---E 395 K + + ++IR D AR+GGEEF VLL + ++A +AERIR V D P Sbjct: 252 KELGLRLKQTIRNTDPAARIGGEEFAVLLPNCSLDKAARIAERIRSTVS----DAPIVLT 307 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 VTIS+GA N P + LAD LY+AKETGRN+V Sbjct: 308 NGDELSVTISLGAAHYPNNTEQPGSLPILADQMLYKAKETGRNRV 352 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 12/200 (6%) Query: 250 YISRTI--EVVSKLTVMVIFMCHIFSALRVTKN---IAHRDPLTNIFNRNYFFNELTVQS 304 YIS + + KL ++ F + ++ + +A+ DPLTN++NR +F + + Sbjct: 252 YISTKVPFDRPDKLPALIGFSTDVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEY 311 Query: 305 ASAQKTPYCVMIM--DIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEE 362 A++ + ++ DIDHFK +ND +GHP GDQV+ + + S+R D+LAR+GGEE Sbjct: 312 QRAKRYSLSMTLISIDIDHFKSINDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEE 371 Query: 363 FGVLLTDIDTERAKALAERIRENVERL--TGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 F +LL + A AERI+E RL TGD + I V+I + +++ + A + Sbjct: 372 FSILLPETSAMSAMTFAERIKEEQSRLIITGD-WQGEINLSVSIGVSSLIASDKAFDV-- 428 Query: 421 IYRLADNALYEAKETGRNKV 440 ++ AD ALY+AK TGRN V Sbjct: 429 LFSRADKALYQAKNTGRNTV 448 >UniRef50_C5SB80 Diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SB80_CHRVI Length = 317 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 102/172 (59%), Gaps = 7/172 (4%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 A R+ + +A D LT + NR YF L V+ A + P V++MD+DHFK+VNDT+G Sbjct: 149 QANRLNEQLARTDALTQLPNRRYFMERLNHGVRQAQTRSHPLSVLMMDLDHFKRVNDTFG 208 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+V+ ++ +R DL R+GGEEFG+ + D + E A ++AER+R +V + Sbjct: 209 HAAGDRVLVAFAELMRAQVRLSDLPGRLGGEEFGLYMFDAELEVAVSVAERLRAHVNLMR 268 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + +Y V+I + A+ E+ ++ + AD+ LY AKETGRN+V+ Sbjct: 269 PLDTDYR--PSVSIGVAALAPGEDT---EQLLKRADDGLYRAKETGRNRVIA 315 >UniRef50_Q56569 Vibrio anguillarum virC n=1 Tax=Listonella anguillarum RepID=Q56569_VIBAN Length = 206 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 97/163 (59%), Gaps = 6/163 (3%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNI 344 DPLT+++NR Y + Q + P+ + I+D+D+FKK+ND +GH GD+V++ + I Sbjct: 44 DPLTDLYNRRYLDTWFSYQEETTNNKPHLLAIIDVDYFKKINDQYGHEAGDEVLRALSTI 103 Query: 345 IGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTI 404 + + +RP+DLL R GGEEF V++ K + ERIR VE+ + +P VT+ Sbjct: 104 LKQQLRPEDLLMRWGGEEF-VMIISTPEAHIKEVLERIRAQVEQTSFYWAGQRVP--VTV 160 Query: 405 SIGAVVTQ---ENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 SIGA+ + + AL+ AD ALY+AK GRN+ +V D Sbjct: 161 SIGAIAEKSVSKLALSWQSAMESADQALYQAKSEGRNRFIVND 203 >UniRef50_B9R0D3 GGDEF domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0D3_9RHOB Length = 405 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 92/163 (56%), Gaps = 6/163 (3%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 A RDPLT FNR F L Q A + ++ D+DHFK+VND +GH GD+ + V Sbjct: 216 ARRDPLTGTFNRREFLRRLEGQLQPATGAHFGLIQFDLDHFKQVNDRFGHVAGDEALVKV 275 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ- 400 I +R D AR+GGEEFG+LL ++ E A +AERIR VE + E+A P Sbjct: 276 CQAIRHHLRRSDCFARLGGEEFGLLLPNVGQEDAVVIAERIRRLVEN---QSYEFA-PDG 331 Query: 401 -KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 ++TIS G +L P +++++ D LY +K GRN++ + Sbjct: 332 FQITISGGMYHGTGESLTPTDLFKIVDTGLYTSKNAGRNRITM 374 >UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI0_9BACT Length = 750 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 5/192 (2%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHR---DPLTNIFNRNYFFNELTVQSASAQKT-- 310 E+V ++ ++ + LR + HR D LT +FN YF +LT ++ A ++ Sbjct: 531 ELVVRVKALIAQKREFEAMLRAYHSARHRAITDGLTGLFNHAYFLEKLTREAELAGRSGR 590 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P V+++D+D FK NDT GH G++++K + ++ + R DLLAR GGEEF VLL + Sbjct: 591 PLSVIMLDVDRFKHFNDTNGHETGNELLKDLARLMERCFRRSDLLARYGGEEFVVLLPNT 650 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 +A LAER+R V E +T+S+G + +P ++ LAD ALY Sbjct: 651 PKSQAAVLAERLRRRVAEYPFVGRESQPGGCLTVSLGVAAMPTDTSDPKQLLELADRALY 710 Query: 431 EAKETGRNKVVV 442 AK+ GRN+V V Sbjct: 711 RAKQNGRNRVCV 722 >UniRef50_B6BJE3 GGDEF domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BJE3_9PROT Length = 648 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 105/165 (63%), Gaps = 6/165 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQ 336 + I+ D LT I+NR YFF L + + +Q+ ++++DID FK +NDTWGH +GD+ Sbjct: 484 RKISRTDALTGIWNRRYFFEMLDREISRSQRYDINMSLLMIDIDLFKNINDTWGHDIGDK 543 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE-RAKALAERIRENVERLTGDNPE 395 IK VVNII ++R +++ +R+GGEEFG++L + ++++ERIR+++E + E Sbjct: 544 AIKHVVNIINSNVRKENIFSRLGGEEFGIILIETKVPYTPQSISERIRKSIEAVPLIIDE 603 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 +I V+I I ++ + A N +Y +D ALY AKE GRN+V Sbjct: 604 KSIKITVSIGIANIMNNDTA---NTLYVRSDRALYLAKENGRNRV 645 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 98/165 (59%), Gaps = 4/165 (2%) Query: 280 NIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 +A D LT +FNR F E + +++MDIDHFK+VNDT GH VGD+V Sbjct: 888 ELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTHGHGVGDEV 947 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 ++ + I ++R D+L R+GGEEFGVLL + D A +A+R+R +E+ + Sbjct: 948 LRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAIEKASMATDAGT 1007 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + ++T+SIGA + +A + + AD ALYEAK++GRNKVV Sbjct: 1008 L--RITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVVA 1050 >UniRef50_A0Y2V2 GGDEF family protein n=3 Tax=Alteromonadales RepID=A0Y2V2_9GAMM Length = 524 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 103/167 (61%), Gaps = 13/167 (7%) Query: 279 KNIAHRDPLTNIFNR---NYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 K+ A DPLTN NR N ++L ++ +TP+ ++ +DID FK+VNDT+GH GD Sbjct: 367 KHDAQTDPLTNTHNRRSLNGLLSQLMLK-----QTPFAILEIDIDFFKRVNDTFGHDKGD 421 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 + +K + +II K R D+++R+GGEEF ++L D++ A +AER+R VE + Sbjct: 422 EALKVLADIIKKISRKGDIVSRIGGEEFLLVLPHEDSQSALKIAERLRTTVETTQMETIG 481 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + +T+SIG ++ N +++Y+ AD ALY AKE GRN+ VV Sbjct: 482 F-----ITVSIGIATWPTHSNNIDQVYKCADKALYYAKEHGRNRCVV 523 >UniRef50_A7INP4 Diguanylate cyclase n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7INP4_XANP2 Length = 401 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 112/211 (53%), Gaps = 14/211 (6%) Query: 238 LLFMSRYSVSTWYISRTIEVVSKLTVMVIFMC--------HIFSALRVTKNIAHRDPLTN 289 LL S + YI T +VS+++ ++F+ + + +R ++ A D L+ Sbjct: 175 LLVQMGTSRTAKYIDTTYALVSQVSSGILFLATGLILLLKSVQAVVRESQIAAETDVLSG 234 Query: 290 IFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 + NR F + A A+ P ++I+D+DHFK VND +GH GD I+ ++ +++ Sbjct: 235 LLNRRGFDSRAERLIAQAKGRPVALLILDLDHFKSVNDRFGHSTGDAAIRAFAVLLSRTV 294 Query: 350 RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV 409 P L+AR+GGEEF VLL E A+ AE IR T + E +P K+T+SIG Sbjct: 295 PPSALIARLGGEEFAVLLDRTGLEAARLQAEAIRLA----TFHHQEVGLP-KLTVSIGVA 349 Query: 410 VTQENALNPNEIYRLADNALYEAKETGRNKV 440 + L P + R AD ALYEAK GRN+V Sbjct: 350 APASSHLLPEAMER-ADAALYEAKRAGRNRV 379 >UniRef50_B4U5Q5 Diguanylate cyclase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5Q5_HYDS0 Length = 497 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 12/196 (6%) Query: 255 IEVVSKLT-VMVIFMCHIFSALRVTK----NIAHRDPLTNIFNRNYFFNEL--TVQSASA 307 I + K+T +M I + + S L+ K ++A++D LT I+NR +FF E+ +++ A Sbjct: 294 ISKLKKITYMMAIEIKKLVSELQKDKEKFQDMAYKDALTGIYNRRFFFEEINISIEQAKR 353 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 P C+++ DID+FKKVNDT+GH +GD V+K N+I SIR D+ AR+GGEEF L Sbjct: 354 ANVPICIVMYDIDNFKKVNDTYGHDMGDVVLKDFANVIVSSIRKSDIPARLGGEEFAAYL 413 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLAD 426 + D E +A IR+N E T I K T S G + QE+ ++ + D Sbjct: 414 YNTDIENGFRVANNIRQNFENSTHTLNGTTI--KCTCSGGIYQIQQEDGIDS--ALKKVD 469 Query: 427 NALYEAKETGRNKVVV 442 ALY AK T +N+VV+ Sbjct: 470 EALYVAKRTTKNRVVI 485 >UniRef50_Q2YBC6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBC6_NITMU Length = 569 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 4/167 (2%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPV 333 R+ + ++ D LT ++NRN L Q A ++T P+ ++++DIDHFK +NDT+GH Sbjct: 401 RMLEKLSITDSLTGLYNRNKLDAILADQLARFRRTQRPFALLMLDIDHFKTLNDTYGHIT 460 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+++ V I+ +SIR D AR GG+EF ++L + ++A AERIR +VE+LT Sbjct: 461 GDKILAKVAQILLQSIRSIDYAARYGGDEFIIILVETYIDQAVKTAERIRTHVEKLTYPA 520 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 + I +T+SIGAV + + ++ ADNALYEAK GRN+ Sbjct: 521 GKSTI--SITVSIGAVECRSDDSTTTAVFSRADNALYEAKRAGRNQA 565 >UniRef50_B0SEM7 GGDEF domain protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEM7_LEPBA Length = 288 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 10/166 (6%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQKT----PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 IA DPLT I NR FF+ L ++ A Q++ P ++ D+D FK +NDT+GH GDQ Sbjct: 119 IAMTDPLTGISNRRSFFSNLEIELARKQRSVGPYPIAFLLFDLDLFKSINDTYGHEFGDQ 178 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ ++ S+R D AR GGEEF VLL + D + A +AE+IR + L+ Y Sbjct: 179 VLIEFATVLKTSLRKQDFPARWGGEEFLVLLPNTDLDGAIVVAEKIRTSFHSLS----FY 234 Query: 397 AIPQKV--TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 A +++ + S+G V E +NP + AD LYEAK GRN++ Sbjct: 235 AKDKRIQCSTSVGISVCNEQGINPEVVINQADQYLYEAKRNGRNQI 280 >UniRef50_C6BSH8 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSH8_DESAD Length = 283 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 16/238 (6%) Query: 218 YDIWNGVTVIAFC-AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR 276 ++ G+ V+ C + + R+ ++ W V M + H+ S L+ Sbjct: 34 HECPEGLAVLRLCPGMTLKAWEILAERHGLNDWM------TVPLDRNMAPHLNHVQSVLQ 87 Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 DPLT + NR F L ++ KTP + I+D+D+FKK+NDTWGH G Sbjct: 88 ELSYKTEHDPLTGLSNRRVFERTLDQEIERTRRSKTPLTLAILDLDNFKKINDTWGHLKG 147 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT---- 390 D+V+ +++ ++ R DL+AR+GGEEF ++L+ + +AK L ER+ + V LT Sbjct: 148 DEVLIDFADLLSQNSRRYDLVARIGGEEFAIILSGVGLVKAKQLLERLLDKVRGLTFAKP 207 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 G N ++I IS + + + +E+ AD ALYEAKE+G+++V D+++F Sbjct: 208 GSNETFSITCSAGISCFKGMVE---VEMHELISKADKALYEAKESGKDQVCSADILDF 262 >UniRef50_UPI0001AEBF6C diguanylate cyclase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBF6C Length = 586 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 7/192 (3%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVT-KNIAHRDPLTNIFNRNYFFNELTVQS---ASAQKT 310 I +++ T++V+ I L + A D LT + NR+YF EL ++ S Q+ Sbjct: 379 ITLLASTTILVLMWAIINRKLHAALREKAQTDSLTKVANRHYF-TELASKALDRMSEQQD 437 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 +I D+DHFK VND++GHP GD V+K VVN + K R +D+ R+GGEEFG+LL Sbjct: 438 VLSFVIFDLDHFKSVNDSYGHPTGDWVLKAVVNAVRKHCRKEDVFGRLGGEEFGLLLPGC 497 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 + ++AK +AE +R ++ ++ D E ++ S G T + +Y AD ALY Sbjct: 498 NEKKAKEIAECMRNSIRQI--DTAESGFTFDISASFGISSTASSKYQFEALYANADEALY 555 Query: 431 EAKETGRNKVVV 442 +K+ GRN+V V Sbjct: 556 GSKKHGRNRVSV 567 >UniRef50_A6DBG2 Diguanylate cyclase (GGDEF domain) n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBG2_9PROT Length = 536 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/164 (42%), Positives = 104/164 (63%), Gaps = 11/164 (6%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKTPYCV--MIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT ++NR + N L A+A +T V +++D+D+FKKVNDT+GH VGD ++K + Sbjct: 375 DPLTKLYNRRFLENILNKIIANADRTNQKVAFVMIDMDYFKKVNDTYGHDVGDMILKQLA 434 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDI-DTERAKALAERIRENVERLTGDNPEYAIPQ- 400 NI+ SIR D++ R GGEEF ++L +I D E E+IR+ +E E+ IPQ Sbjct: 435 NILKSSIRESDIVVRFGGEEFLIILNNIKDKECLFKTLEKIRKKIEEY-----EFQIPQG 489 Query: 401 --KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 K TIS+GA + + +P + + AD ALY+AK +GRNK+V+ Sbjct: 490 KIKKTISMGASLYPDTCNSPWQCIKNADIALYKAKNSGRNKIVI 533 >UniRef50_A1K8W1 GGDEF family protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K8W1_AZOSB Length = 569 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/165 (43%), Positives = 98/165 (59%), Gaps = 7/165 (4%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQV 337 +A RD LT + NR +LT + +++ PY V++ DID FK++ND GH VGD V Sbjct: 396 QLARRDALTGLPNRLAANEQLTEEFLRMKRSLVPYAVLMADIDLFKRINDGHGHAVGDAV 455 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 ++ V +I S+R D +ARVGGEEF VLL + D E A +AE+IR VE PE Sbjct: 456 LRHVAGVIRSSLRITDFVARVGGEEFLVLLPNTDIEAAAVVAEKIRVAVEGAAA--PEVG 513 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +VT+SIG +P++ RLAD+ LYEAK GRN++ V Sbjct: 514 ---QVTLSIGVGRAVSAHPSPDDAVRLADDGLYEAKRLGRNRISV 555 >UniRef50_B5JAC0 GGDEF domain protein n=2 Tax=Octadecabacter antarcticus RepID=B5JAC0_9RHOB Length = 463 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 101/169 (59%), Gaps = 19/169 (11%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT +FNR Y L+ SA ++K+ + +M++D+DHFK +NDT+GH VGD++++ Sbjct: 296 DPLTGLFNRRYAMPHLSRLSAQSRKSGRKFAIMVLDLDHFKAINDTYGHKVGDEILRQTA 355 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ-- 400 + + ++R DLLAR+GGEEF V + + D A+ AER+RE L G P + P Sbjct: 356 SRLQDNLRAVDLLARIGGEEFLVAIPNSDVFHARTAAERLRE----LIGGAPFFVGPDQK 411 Query: 401 --KVTISIGAVVTQENALNP-------NEIYRLADNALYEAKETGRNKV 440 +VT+S+G V+ + +P E+ AD ALY AK GRNKV Sbjct: 412 EVRVTMSVG--VSLSDGQDPKDMVDDLGELVNAADVALYAAKNGGRNKV 458 >UniRef50_B8FL29 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Bacteria RepID=B8FL29_DESAA Length = 593 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 5/159 (3%) Query: 285 DPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT + NR YF ++ VQ A +P + +MD+DHFK VNDT+GH GD+V+ Sbjct: 434 DELTGLSNRRYFNEVVDIEVQKARNNGSPLTLCMMDLDHFKNVNDTYGHLTGDKVLAETG 493 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 ++ + R D++ R GGEEF V+L D D E AK ER RE+V+ D + K+ Sbjct: 494 ALLKQGFRSHDMIFRYGGEEFAVILPDTDLEHAKRACERFRESVQEHVMDAKVKQV--KI 551 Query: 403 TISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 TISIG A + E + E+ AD+ALY AKE GRN+V Sbjct: 552 TISIGIANMPGEQIMEAGELIDAADHALYRAKELGRNRV 590 >UniRef50_B4SMP5 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SMP5_STRM5 Length = 479 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 95/167 (56%), Gaps = 10/167 (5%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A RDPLT + NR F L + A Q V+++DIDHFK++NDT+GHP GD+ Sbjct: 301 EALARRDPLTGLGNRRNFDESLGSAHRRARRQGLGLAVLMIDIDHFKRLNDTYGHPEGDR 360 Query: 337 VIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 ++ V I+ + R DDLLAR GGEEF L D A +L ER+R VE T P Sbjct: 361 RLRAVAGILDGCLQRGDDLLARYGGEEFIAALPSPDITHALSLGERLRAAVE--TAGLP- 417 Query: 396 YAIPQKVTISIGAV--VTQENALNPNEIYRLADNALYEAKETGRNKV 440 A VTISIG +EN +P ++ AD ALY AK GRN+V Sbjct: 418 -AAEAVVTISIGVAWQAARENG-DPRDLVDRADQALYRAKHAGRNRV 462 >UniRef50_A6LYL1 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYL1_CLOB8 Length = 568 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 26/222 (11%) Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHR------- 284 +L + LL + ++ ST Y + +IE + +F I ++ K + + Sbjct: 352 ILGSYGLLEWNIFAFSTCYPAASIETL-------LFTIGIIKQIKHEKEVNTKLQLEVIT 404 Query: 285 DPLTNIFNRNYFFNELTVQSA----SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 D LTNI+NR YF E TV + +K+ ++++DIDHFKKVNDT+GH GD V+ Sbjct: 405 DKLTNIYNRRYF--EETVVNKILQLEKEKSLVSMLVLDIDHFKKVNDTYGHSTGDLVLSE 462 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 II + +R +D+L R GGEEF +L D++ + +AE IR ++E N ++ Sbjct: 463 TAMIIKQCLRKEDILVRWGGEEFVAVLPFTDSKESTIIAETIRLSIE-----NHKFKFVN 517 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 K+T+SIG + ++ + + +R ADNALY AKE GRN V + Sbjct: 518 KITVSIG-IAEKDVVEDFHSWFRRADNALYNAKENGRNTVCI 558 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 6/167 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 KN+AH D LT ++NR +F + E ++ + C+++ D+DHFK +ND++GH VGD+ Sbjct: 245 KNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASS-CLLMFDVDHFKNINDSYGHDVGDR 303 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER-LTGDNPE 395 V++ + + K +R D+LAR GGEEF LL D + + +AERIR +++ P Sbjct: 304 VLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQDSLVIAERIRCAIQKQYIYVEPN 363 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + I + TISIG + + ++ + AD ALY+AK++GRN++ V Sbjct: 364 HTI--RFTISIGVAELESHTQPLEDLIKQADIALYQAKKSGRNRIEV 408 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/168 (42%), Positives = 100/168 (59%), Gaps = 13/168 (7%) Query: 280 NIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 ++ D LT + NR +F F + Q A+ Q++ V+++DIDHFK+VND GHP GD+V Sbjct: 335 RLSQTDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIGHPGGDRV 394 Query: 338 IKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 ++ V +II S+ RP D R GGEEF ++L + D A +AERIR +E T E Sbjct: 395 LREVSDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEANTA---EG 451 Query: 397 AIPQKVTISIG---AVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 P VT+SIG + + L E+ AD+ALY AKETGRN+VV Sbjct: 452 VAP--VTVSIGLAAGLAAPKGTL--AEMMIAADHALYRAKETGRNRVV 495 >UniRef50_A6Q5K7 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5K7_NITSB Length = 344 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/178 (34%), Positives = 108/178 (60%), Gaps = 11/178 (6%) Query: 276 RVTKNI---AHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 ++T+N+ + DPLT ++NR +FF E T + A + P ++ +D+DHFK++ND +G Sbjct: 172 QITENLYKLSTTDPLTQLYNRRFFFEECTKKINLAKRKSLPIALLSIDLDHFKQINDQYG 231 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+++ + I+ KS+R D++AR+GGEEF V + D + + +A +I ENV ++ Sbjct: 232 HAQGDEILTSFAKILQKSLRGYDIVARMGGEEFAVCIIDENLNNVRFIANKILENVRKI- 290 Query: 391 GDNPEYAIPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 E A +++SIG ++ + +N ++ AD ALY AKE GR+++ V + N Sbjct: 291 ----EVAPSNNLSVSIGIAFSKPHENINLQQLLIQADKALYRAKERGRDRIEVYEEKN 344 >UniRef50_C0QTH1 Signal transduction response regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QTH1_PERMH Length = 683 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 108/167 (64%), Gaps = 11/167 (6%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPY--CVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A DPLT+++NR F + L + + A++ Y ++++D+D+FK +NDT+GH +GD V+K Sbjct: 267 AGHDPLTDLYNRRIFEDLLKYEVSRAKRKNYKFSLILIDLDNFKYINDTYGHHIGDIVLK 326 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 +V +I+ SIR DL+AR+GG+EF +LL++ + E+A +AERIR+N+E N + I Sbjct: 327 SVADILEASIRDGDLVARIGGDEFVILLSETELEKALIVAERIRKNLE-----NNKLCIF 381 Query: 400 Q----KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + V+ S+G V + E+ + DNALY AK+ G+NKV V Sbjct: 382 EGAVISVSASLGVVEFPTHGTTKEELMMVVDNALYRAKDLGKNKVYV 428 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 224/465 (48%), Gaps = 62/465 (13%) Query: 10 STVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVM-IALFFIDTVAFIFMQLYFIYD 68 + V+V+LL + ++++ + + P + ++ P +L V A+ ++++ + F + Sbjct: 16 AAVIVALLLLTSALVISPFISIP-LPDIAP---FLPVYGTAVVLLESITAYLLLSQFASN 71 Query: 69 RRQFSNCVLSLAFLSCLIYFVITVIIIQQII------EERLTSSVVQNDIAIYYLFRQMS 122 R+ F+ V S A+L F+I ++ +Q ++ + L ++ Q+ + I+ +F S Sbjct: 72 RQVFAGFVAS-AYL-----FLIPLVTVQLLVFPGVFAPKGLLNAGSQSAVWIW-VFWHAS 124 Query: 123 LCILIFLALVNKVSENTKQRNLFSKK------------MTLCISLFFVFGGPIVAHILSS 170 LI LAL+ + T+Q K +L ++LF +G + +++ Sbjct: 125 FPTLILLALMAQQKLTTQQVAPMQLKYWLWGFVLIPVLCSLALALFATWGSHWLPILIAK 184 Query: 171 HYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFC 230 + LH + +VW + + ++ M S N+ + L +A Sbjct: 185 NSYKQLLH-----SPYALLVWGLNALA-LVCMIRRARSNNVLYTWLS---------VALL 229 Query: 231 AVLYNISL-LFM-SRYSVSTWYISRTIEVVSKLTVMVIFMCHI----FSALRVTKNIAH- 283 A L +++L LF +R+S+ WY +R VS + ++ + + + R +++ Sbjct: 230 ASLIDVTLTLFAGARFSLG-WYAARISSSVSSMVLLCALLWEVNRLYVATQRANESLYQQ 288 Query: 284 --RDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 +D LT +FNR Y ++L + A K P C++++D+DHFK ND GH GD + Sbjct: 289 SVKDTLTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVLDVDHFKAFNDQHGHLAGDDCLV 348 Query: 340 TVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY-A 397 TV + +S+ RP D +AR GGEEF V+L D + +AER+R NV + + EY Sbjct: 349 TVAKQLEQSLYRPADFIARYGGEEFIVVLPHTDAKDGMQIAERLRLNV---SAEKIEYQG 405 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VTISIG V + + + AD+ALY+AK GRN V V Sbjct: 406 QLLSVTISIGCAVLRHSEETAQSLLIAADSALYQAKAAGRNCVKV 450 >UniRef50_A0L200 Diguanylate cyclase n=2 Tax=Shewanella RepID=A0L200_SHESA Length = 380 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 100/174 (57%), Gaps = 14/174 (8%) Query: 282 AHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + DPLT + NR +F + L V S + ++I+DID FK++NDT+GHP GD VI Sbjct: 208 SRTDPLTGVANRRHFDSLLKSEVNRNSRFGSACALIILDIDFFKRINDTYGHPTGDSVIC 267 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER--LTGDNPEYA 397 ++ N R DL+AR+GGEEF ++L D + AK L ERIR +VE L + E Sbjct: 268 SLANFCVTLSRETDLVARLGGEEFAIILPDTNISSAKNLGERIRLHVENQSLISETGEKV 327 Query: 398 IPQKVTISIGAVVTQENALNPN-------EIYRLADNALYEAKETGRNKVVVRD 444 I TIS+G QE+ + N ++ + AD ALYEAK+ GRN+ V+ D Sbjct: 328 I---WTISLGISALQEHKITKNNNEFIAEQLIQHADTALYEAKKGGRNRTVLYD 378 >UniRef50_A4B9Y3 Diguanylate cyclase (GGDEF domain) n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y3_9GAMM Length = 300 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 101/166 (60%), Gaps = 9/166 (5%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 K ++ D LT + NR +N+ Q S Q+ PY +M++D+DHFK++ND +GH GD + Sbjct: 140 KQLSITDALTGLMNRT-AYNQRIEQFVSDQQ-PYLLMLIDLDHFKQINDRYGHDAGDAAL 197 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE--RLTGDNPEY 396 K V ++G + R + RVGGEEF ++LT +A+++AER+R +E + + E Sbjct: 198 KQVGALLGSNSRNQEDCFRVGGEEFAIVLTQCSLSQAESIAERLRTAIETHAIRWQDAEL 257 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + T+SIG ++Q +P YR AD ALYEAK+ GRN+VVV Sbjct: 258 S----CTVSIGLCLSQTGE-SPQTTYRHADAALYEAKQNGRNRVVV 298 >UniRef50_A0NVH7 Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVH7_9RHOB Length = 387 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 6/168 (3%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 A RDPLT FNR F L K + ++ D+DHFK+VND +GH GD+ + V Sbjct: 219 ARRDPLTGAFNRREFQARLENLLKETPKDDFGLVHFDLDHFKQVNDRFGHVAGDEALVRV 278 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 + + +R +D AR+GGEEF VLL I E A +AER+R ER+ G E+A P++ Sbjct: 279 CSEVKAHLRQNDCFARLGGEEFAVLLPSISRENAYRVAERLR---ERIAGLRFEFA-PRE 334 Query: 402 VTISIGAVVTQENA--LNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 ++ A V N L NE+ + D +LY++K TGRN+V + D V+ Sbjct: 335 FNLTASAGVYHGNGSKLPSNELLKTVDQSLYQSKRTGRNRVSIVDTVS 382 >UniRef50_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL0_9RHOB Length = 341 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 3/168 (1%) Query: 282 AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A D LT + R ++ + + +Q A+ C+ + DID FK++ND +GH VGDQVI+ Sbjct: 168 AGSDQLTGVMARRHWVSMVKEEIQRAARNSNLLCIALFDIDRFKRINDAYGHAVGDQVIR 227 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V+ +R L R+GGEEF +L T+ ++A AER R +ERLT P+ Sbjct: 228 NVIATCKHELRAGSKLGRIGGEEFAILFTECALDQAVVAAERCRRAIERLTLTAPD-GED 286 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 ++T S G AL+P+E+ LAD ALY+AK GRN+V V VVN Sbjct: 287 IEITASFGVAPLFSYALSPDELIELADRALYQAKSGGRNRVEVGQVVN 334 >UniRef50_Q2W9E2 Predicted signal transduction protein n=2 Tax=Magnetospirillum RepID=Q2W9E2_MAGSA Length = 679 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 102/166 (61%), Gaps = 4/166 (2%) Query: 279 KNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 ++++ RDPLT ++NR F F + + A P+CV +D+D FK +NDT+GHP+GD Sbjct: 263 EDLSIRDPLTRLYNRRKFDEFLDHEIDRAQRHGHPFCVAQIDLDDFKNINDTFGHPIGDL 322 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+K + +++ + +R D++ARVG +EF VLL + E A AE++R+ V P Sbjct: 323 VLKELASVLYREVRRTDVVARVGADEFAVLLPETTMEEGVAAAEKLRQAVADCQLGLPVG 382 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + ++T SIG V +NA + ++ AD A+Y+AK +G+N+V V Sbjct: 383 GV--RITASIGLVGYPDNADDAQKLAIAADVAIYKAKRSGKNQVAV 426 >UniRef50_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii RepID=B2UI26_RALPJ Length = 348 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 2/173 (1%) Query: 271 IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDT 328 I + L++ ++ + DP+ I+NR LT + A + P ++++D+DHFK+VNDT Sbjct: 170 ILTELQIARHESLTDPMLGIWNRRAAMELLTRECGHAMRYGQPLSLLVVDVDHFKRVNDT 229 Query: 329 WGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 +GHPVGD V+ + + + RP D + R GGEEF V+L D T +A +AER+R VE Sbjct: 230 YGHPVGDAVLVEIARTLRVNSRPIDAVGRYGGEEFLVVLPDTTTLQASDIAERLRSAVES 289 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 L PE I +++ + + ++N P ++ AD AL AK GRN+V+ Sbjct: 290 LEIATPEANIRSSISVGLASCEPEKNLCTPTDLIMRADAALLAAKRLGRNRVI 342 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 97/171 (56%), Gaps = 14/171 (8%) Query: 279 KNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A D LT IFNR +F + V A P +++DIDHFK++NDT GHPVGD Sbjct: 414 RRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLDIDHFKRINDTHGHPVGDV 473 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 IK + ++ + IR +D+L R+GGEEF ++LT+ D + A +AER+R+ V + Sbjct: 474 AIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLVAERLRQAVAAIR------ 527 Query: 397 AIPQKV-----TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 IP ++ T SIG E + I AD ALY AK +GRNKV V Sbjct: 528 -IPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRNKVAV 577 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 9/198 (4%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF---FNELTVQSASAQK 309 R IEV++ + ++ + + +A D LT ++N F +E+ QS Q+ Sbjct: 507 RMIEVIAIQAAQAVLRAQLYEQM---ERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQR 563 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 + +++ D+DHFK VNDT+GHP GDQV+K V II R D++AR GGEEF +++ + Sbjct: 564 K-FSLILTDVDHFKSVNDTYGHPTGDQVLKGVARIIKTMARDTDIVARYGGEEFVIIMPE 622 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNAL 429 D + A ++ERIRE V+ E P ++T+S+G ++A+ ++ LAD L Sbjct: 623 TDAKGAFTISERIREAVKAEV-FQTEMG-PLRITMSLGIATFPDSAMEKQQLIDLADQCL 680 Query: 430 YEAKETGRNKVVVRDVVN 447 Y +K GRN+ V D++ Sbjct: 681 YHSKRNGRNQSVTVDIMQ 698 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 16/170 (9%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A RD LT ++NR YFF + SAQ K P +++ DIDHFK++NDT+GH +GD+ Sbjct: 600 RELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKRINDTYGHMIGDE 659 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE- 395 V++ + ++G ++R DLLARVGGEEF VLL E+A +A RI L G N Sbjct: 660 VLRQLTQLVGANLRNVDLLARVGGEEFAVLLPHTYLEQAHTVARRI------LRGVNEAV 713 Query: 396 ---YAIPQKVTISIG--AVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 A P ++TISIG + +N L + AD ALY AK GRN + Sbjct: 714 IRTEAGPLQLTISIGMSSSAHADNCL--ESLIHDADQALYAAKNKGRNSI 761 >UniRef50_C7HZC5 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZC5_THIIN Length = 400 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 8/172 (4%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPV 333 R ++A +DPLT + NR L + AS + P+CV+++DIDHFK++ND +GH V Sbjct: 222 RRLHDLALKDPLTGLLNRRAAQQLLEREWASYRHKDLPFCVLMIDIDHFKRINDEYGHAV 281 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+V+ + ++ + RP D +AR+GGEEF V L + A+A AER+R++ Sbjct: 282 GDRVLTGLATLLREGTRPTDHVARMGGEEFLVFLPQTELPSAQAAAERLRQHTAAWVLQP 341 Query: 394 PEYAIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 E +I TISIG A E++ + + R AD ALY AK GRN+V + D Sbjct: 342 EELSI----TISIGVAQAAAEDSAFDDLLIR-ADRALYAAKSAGRNRVHLAD 388 >UniRef50_Q1RHW0 Regulatory components of sensory transduction system n=15 Tax=Rickettsia RepID=Q1RHW0_RICBR Length = 457 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 105/177 (59%), Gaps = 3/177 (1%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKK 324 + ++ + L + N+A +D LT +FNR YF + V+ A+ + +++ DID+FK Sbjct: 280 YQDNLRNDLEQSVNLAAKDGLTGLFNRRYFDVHIKQIVEKANKEGMKLYLLMCDIDNFKH 339 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VNDT+GH GD+V+ T I+ + R DL+AR GGEEF +LL DI+ ++A AER+R Sbjct: 340 VNDTYGHQAGDKVLITTSRILKNTFRVTDLIARFGGEEFTILLNDINIDQAIYTAERVRV 399 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 +E + E P K T+SIG V + + E +D A+YEAK TG+NKVV Sbjct: 400 KIESMNFQIDEQEKPLKKTVSIG-VTEYKKCESIEEFIERSDKAMYEAKTTGKNKVV 455 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 9/165 (5%) Query: 285 DPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LTN+FNR +FF+ + + +S ++ VM++DIDHFK++ND GH GD V+ + Sbjct: 383 DELTNLFNRRHFFSLAKHELNRSSRYRSKLSVMMLDIDHFKRINDGHGHKTGDLVLANIG 442 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL---TGDNPEYAIP 399 IG S+R D+ R+GGEEF +LL + D E+A +AER+R+ V GD Sbjct: 443 KQIGDSLRDSDIAGRMGGEEFAILLPETDLEQASIMAERLRKQVAETWLDIGDGRTL--- 499 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 T+SIG + ++ + AD ALY AK +GRNKV D Sbjct: 500 -NCTLSIGLATKSDQQIDLENLLHQADTALYAAKNSGRNKVSCAD 543 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 93/166 (56%), Gaps = 7/166 (4%) Query: 279 KNIAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K A DPLT +FNR YF E ++ A P V+ +DIDHFK VNDT GH VGD Sbjct: 396 KRQASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDL 455 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ V ++ + R DL+AR GGEEF +LL D AERIR VE + D + Sbjct: 456 VLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGD- 514 Query: 397 AIPQKVTISIGAVVTQENAL--NPNEIYRLADNALYEAKETGRNKV 440 + +VT+S+G V + N L + + AD +LYEAK GRN+V Sbjct: 515 GLAVRVTVSVG--VAEVNPLLESVEGAVKRADRSLYEAKAGGRNRV 558 >UniRef50_A3QDK0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Shewanella loihica PV-4 RepID=A3QDK0_SHELP Length = 496 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 8/167 (4%) Query: 279 KNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K+ A+ DPLT + NR +L + ++ Q+TP V I DIDHFK VND GH VGD Sbjct: 334 KSQANTDPLTKVANRRAINRQLAAAISRSNRQQTPLAVCIFDIDHFKAVNDKHGHLVGDD 393 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V++ V I +IR D + R GGEEF ++L D D E AK A+++R+ V+R + Sbjct: 394 VLQRVAKIFSDAIRKTDFVGRWGGEEFVIILEDTDKEGAKHFADKLRQEVKRRSQG---I 450 Query: 397 AIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 P +T+S G +V Q++ + ++ AD ALY AKE+GR+ VVV Sbjct: 451 DFPVAITLSAGVSVYCQDDKQDC--LFNHADQALYRAKESGRDCVVV 495 >UniRef50_C7RBD9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBD9_KANKD Length = 426 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 6/163 (3%) Query: 282 AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A +D LT + NR +F+ E+ SA TP ++DIDHFK+VNDT+GH VGD V+ Sbjct: 258 ATKDYLTGLNNRRHFYELVEVMHNSAVRHSTPIACALVDIDHFKQVNDTYGHQVGDAVLT 317 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + I+ S+R D++AR GGEEF + + I+ E ++ +++ + VE D + Sbjct: 318 EIAKILESSVRKSDVVARFGGEEFCMYMVGINRENSEIFFDKLLKRVENTAIDID--GLE 375 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 KVTISIG + + L+ + +AD LYEAKETGRNKVV+ Sbjct: 376 VKVTISIGVNINHHHVLDS--MIEIADQCLYEAKETGRNKVVI 416 >UniRef50_B4U7Y9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7Y9_HYDS0 Length = 846 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 104/163 (63%), Gaps = 7/163 (4%) Query: 282 AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A RDPLTN++N+ F+ E V+ A + ++++D D+FK +ND +GH VGD ++ Sbjct: 430 ATRDPLTNLYNQRVFWELLEYEVERAKRHNYKFSLLVIDFDNFKLINDAYGHTVGDNFLR 489 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD--NPEYA 397 V II + R +D++AR GG+EF V++ D E+A + ++R+ +++++ + + + +YA Sbjct: 490 RVAKIIEANFRNEDIIARYGGDEFVVIMPYTDAEQAFSASKRLLDDIDKFSMEVNSGKYA 549 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 K TISIGA V ++A E++ LADN LY+ KE G+N + Sbjct: 550 ---KATISIGAAVYPDHARAAKELFVLADNLLYKMKEEGKNGI 589 >UniRef50_A6W0K6 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0K6_MARMS Length = 556 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 7/169 (4%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPV 333 R + IA +DPLT+I+NR L + AQ K P+ V+++D DHFK+VND++GH V Sbjct: 391 RSLEAIARKDPLTHIYNRLALDEALHKEYRQAQESKCPFAVIMIDADHFKRVNDSFGHTV 450 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD V++ + ++ + ++AR GGEEF VLL +++ + AK +AE IRE +E+ + Sbjct: 451 GDLVLQKIAKLLTVQVGDKGIVARFGGEEFTVLLPNMNADEAKNIAEMIREALEKEEMSD 510 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 Y VT S G + + + + ++ AD ALY+AKE GRN+VV+ Sbjct: 511 GLY-----VTASFGVAMYEIDDSHYEQVLNRADAALYKAKEQGRNRVVI 554 >UniRef50_B8GM76 Response regulator receiver protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM76_THISH Length = 568 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 7/166 (4%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYC--VMIMDIDHFKKVNDTWGHPVGDQV 337 ++A DPLT + NR FF + +++ Y V ++D+DHFK VNDT GH GD++ Sbjct: 402 HLATTDPLTGLANRRSFFEAAERELGRSRRAGYATVVAMLDLDHFKDVNDTHGHAAGDRI 461 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 ++ V ++ K +R DL+ R+GGEEFG+LL D+ A+ + ERIR V + + Sbjct: 462 LELVSRVLVKELRDADLVGRLGGEEFGLLLVDVSVAHAREIVERIRTRVM-----HCDTG 516 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + VT+S G L + LAD ALYEAK GRN+V+ R Sbjct: 517 LDLSVTLSAGIADCDPAMLGLDVAMALADRALYEAKRQGRNRVITR 562 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Query: 252 SRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK-- 309 +R + +L + + +L T+ A D LT + NR F EL +A A + Sbjct: 148 ARNARLHGRLERSAEEIARLRKSLVATRREASTDGLTGLANRMQFERELRSAAAKAMEDG 207 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 T C+++ DIDHFK NDT+GH VGDQV++ V ++ ++IRP DL AR GGEEF V+L + Sbjct: 208 TTLCLLMADIDHFKTFNDTYGHMVGDQVLRLVGRVLIEAIRPGDLAARFGGEEFVVVLPE 267 Query: 370 IDTERAKALAERIREN------VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 + A +AERIRE V R +GD+ VT+S+G Q + I R Sbjct: 268 CRLDEAARIAERIRERIGEKHVVRRSSGDD-----LGTVTLSLGVTAYQPGEVVGQLIER 322 Query: 424 LADNALYEAKETGRNKVVVRD 444 AD LY+AK+ GRN+V V D Sbjct: 323 -ADTGLYDAKQAGRNRVAVVD 342 >UniRef50_Q47WC7 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47WC7_COLP3 Length = 477 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 7/197 (3%) Query: 248 TWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASA 307 T+Y++ + V L + I + ++ +A D LTN+ NR F +EL Q Sbjct: 283 TFYLNVLLSTVITLLISFIIVLYVRKIHLKLDKLASNDDLTNLPNRRSFHDELAKQLLLK 342 Query: 308 QK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGV 365 ++ + ++ +DID+FKKVNDT GH VGD+V+K++ N++ ++R D +AR GGEEF + Sbjct: 343 ERYNSELSLLFIDIDNFKKVNDTKGHDVGDKVLKSLANVLNGNVRKSDFVARWGGEEFII 402 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRL 424 LL D +A+ +AE++R + + +YA Q+VTIS+GA VT E+ N + I + Sbjct: 403 LLIGSDINQAQVIAEQLRSQIAN-SKHLSQYA-QQQVTISLGATSVTNED--NIDTILKR 458 Query: 425 ADNALYEAKETGRNKVV 441 AD ALY+AK G+N VV Sbjct: 459 ADLALYKAKSKGKNCVV 475 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 115/217 (52%), Gaps = 36/217 (16%) Query: 239 LFMSRYSVS---------TWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTN 289 LF + +S+S T Y+S + +V ++L + IAH DPLT Sbjct: 254 LFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLL-----------EIAHSDPLTG 302 Query: 290 IFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 + NR + L + +A P+ ++I DIDHFK VND +GHP GD+V+ +V I+ + Sbjct: 303 LNNRRAAEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVILKQ 362 Query: 348 SIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIG 407 IR D+ AR GGEEF +L+ D + A LA+RIR+ VE L IP +++I Sbjct: 363 RIRLQDVAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLL-------IPNTGSVTIS 415 Query: 408 AVVTQENALNPNE----IYRLADNALYEAKETGRNKV 440 V Q L+P E + + AD ALY+AK GRN+V Sbjct: 416 LGVAQ---LSPGETAASLIQRADKALYQAKRRGRNRV 449 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 12/220 (5%) Query: 233 LYNISLLFMSRYSVS---TWYISRTIEVVSKLTVMVIFMCHIFSALRVT-------KNIA 282 L NI L+ M Y ++ T + R ++ + ++V + T + A Sbjct: 272 LENIPLILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATLGLRSYLTTVRQREELRRQA 331 Query: 283 HRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 DPLT + NR + + + A + + ++DIDHFK +NDTWGHP GD+VI+ Sbjct: 332 DTDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQV 391 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 + + S R D R+GGEEF +L + D E A +AER+RE VE +T + P Sbjct: 392 LAAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPV 451 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 + T+SIG Q + +I AD ALY AK GRN+V Sbjct: 452 RFTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRV 491 >UniRef50_A6VRQ0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRQ0_MARMS Length = 469 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 103/174 (59%), Gaps = 9/174 (5%) Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNEL-TVQSASAQKT-PYCVMIMDIDHFKKVNDTW 329 F A + A+ D LT + NR YFF + T+ + S +K P +++MD+DHFKKVND + Sbjct: 289 FRAQEALQKRAYFDHLTELANRGYFFQQCETLLNLSREKNFPLAILMMDVDHFKKVNDEF 348 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER- 388 GH GD V++ + + +R DDL+AR+GGEEF +LL + + A +AE++RE++E Sbjct: 349 GHKTGDLVLQMLAQMSLSILRRDDLIARIGGEEFAILLPFTEKDEALRIAEQLRESIESS 408 Query: 389 --LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 L+ D+ E T+S+G Q+ ++I AD ALY+AK GRN V Sbjct: 409 MVLSLDHQEVVF----TVSLGVACRQDGDCTVDDILNKADKALYQAKAAGRNCV 458 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 99/162 (61%), Gaps = 3/162 (1%) Query: 281 IAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A D LT + NR+ F + EL +++A + P +++DIDHFK +ND+ GH GD+ + Sbjct: 360 LASTDTLTGLHNRHSFLHQAELMLKAAERFRHPCVALMLDIDHFKNINDSHGHLTGDRAL 419 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 + V + + +R DLL R+GGEEF LL ++ ++A +AER+R VE L NP+ Sbjct: 420 QRVAETLRQGLREVDLLGRLGGEEFAALLPEVSLDQALDVAERLRAGVEALRVSNPD-GE 478 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 P ++T+SIG + ++ + + AD+ALY+AK GRN+ Sbjct: 479 PLRMTVSIGVALRRDAGDDLESLLVRADSALYQAKSGGRNRT 520 >UniRef50_Q2BLU7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLU7_9GAMM Length = 477 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/166 (37%), Positives = 101/166 (60%), Gaps = 9/166 (5%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + IA RDPLT++ NR F + Q+ P ++++DIDHFK++ND +GH GD Sbjct: 314 EGIAWRDPLTSLLNRRAFIDRYAAIRNQHQRNGQPLSLLLVDIDHFKEINDRYGHNAGDL 373 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+K + I+ +++RP DL+ R GG+EF +LL+ D++ A+ +AERIR + P+ Sbjct: 374 VLKGISEILTEAVRPSDLVTRWGGDEFLLLLSGTDSDNARDIAERIRTRISL----EPDL 429 Query: 397 AI--PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 A Q++T+SIG V Q + + + + AD+ LY AK+ GR++ Sbjct: 430 AAISEQRLTVSIG-VAEQRDDFDLDRHVQEADSGLYRAKKAGRDRA 474 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 4/166 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A RD LT ++NR Y E V A + P ++++DIDHFK+VNDT+GH VGD+ Sbjct: 472 QELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLSLVMLDIDHFKQVNDTYGHQVGDE 531 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V++ + + + IR +D+ R GGEEF +LL ++ E A+ R VE L+ + + Sbjct: 532 VLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLETTMLRAQGWRSAVEALSVKHGNF 591 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 I TIS+G E+ P+++ R AD ALY AK GRN+V V Sbjct: 592 QI--TFTISLGVAAYPEHGKTPDDLTRCADQALYRAKNEGRNQVSV 635 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 3/189 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVM 315 + L + + C + + +A RD LT NR +F L + A + ++ Sbjct: 168 IEDLALSLGAFCDTSRHMAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALL 227 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 +DIDHFK++NDTWGH GD+ +K N S+R D+L R+GGEEF V L + + A Sbjct: 228 ALDIDHFKRINDTWGHAAGDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGA 287 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 + +AER+R VE L P +T+SIG +E L + AD ALY AK + Sbjct: 288 RVIAERLRAAVEELV-VRPAKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNS 346 Query: 436 GRNKVVVRD 444 GRN+V+ + Sbjct: 347 GRNRVMAEE 355 >UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD73_MAGSM Length = 513 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN-ELTVQSASAQ 308 YI ++V + + VI + LR + A +DPLT + NR + E T+ ++S + Sbjct: 303 YIIPFLQVFLRESSSVIESKRLMEKLRES---ALKDPLTGLNNRRFLEEYERTIVASSQR 359 Query: 309 KTPY-CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 K + V++MD+DHFK VNDT GH VGD V+K++ ++ + R DL+ R GGEEF V+L Sbjct: 360 KEMFLSVLMMDLDHFKMVNDTHGHQVGDAVLKSLAGVLMQQTRASDLVVRYGGEEFMVVL 419 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 + +AE+IRE VERL + P + + TISIG + + +++ AD Sbjct: 420 QNERPHMGNQIAEKIRETVERLKINVPGGCLQK--TISIGVAEFPTDGTDFDDVVEKADM 477 Query: 428 ALYEAKETGRNKVV 441 ALY AKE GRN+V+ Sbjct: 478 ALYRAKEQGRNRVI 491 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 8/161 (4%) Query: 284 RDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 DPLT I+NR Y N+L V+ A P +++ DID FK +ND++GH VGD+V+K + Sbjct: 617 EDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVGDKVLKAI 676 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 ++ ++IR D+ AR GGEEF ++ + E AK LAE++R + L + Sbjct: 677 AKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNL-----HFEEGIN 731 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VT S G V + E + + AD ALYEAK+TGRNKVVV Sbjct: 732 VTCSFG-VASLEKHDTKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_C5S6C0 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6C0_CHRVI Length = 440 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 101/175 (57%), Gaps = 6/175 (3%) Query: 275 LRVTKNIAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 +R ++ A RD LT ++NR +FF E A ++ +++DIDHFK+VNDT+GH Sbjct: 270 VRTIRDSAVRDYLTGLYNRRHFFETGETLYAGAKRRQITLAAVMLDIDHFKRVNDTYGHL 329 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD 392 GD+VIK V +++ +R DLL R GGEEF +LLT ID ER+R V + Sbjct: 330 AGDRVIKQVASLLACGVRQADLLGRYGGEEFCILLTGIDQSSLAMTLERLRSTVASTPIE 389 Query: 393 NPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 + + ++ VTIS+GA + ++L + AD LY AK+ GRN+ V+ D V Sbjct: 390 HEDQSL--SVTISLGATLALGDSLQA--MINRADACLYHAKQGGRNRFVIDDSVE 440 >UniRef50_Q1D565 FHA domain/GGDEF domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D565_MYXXD Length = 291 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 97/159 (61%), Gaps = 4/159 (2%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKTPY--CVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT I+NR YF +L + + +++ ++++DIDHFK VND +GH GD V+K + Sbjct: 134 DGLTQIYNRRYFDEQLDREISRSRRYERMLSLVLLDIDHFKAVNDKYGHLAGDSVLKQLA 193 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + + IR +D+ AR GGEEF +LL ++ + LAE++R VE+ + IP V Sbjct: 194 STVRTKIRREDVFARYGGEEFAILLPEVSLSGTRQLAEKVRRLVEKQRFEFDRQVIP--V 251 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 T+S+G V + + P E+ R AD L++AK +GRN+VV Sbjct: 252 TVSVGLAVLEPHHREPGELVRDADEKLFDAKTSGRNRVV 290 >UniRef50_A6CP72 Adenylate/guanylate cyclase n=1 Tax=Bacillus sp. SG-1 RepID=A6CP72_9BACI Length = 642 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 6/179 (3%) Query: 279 KNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 KN+++RD LT I NR YF ++E +A K+P VM +DID+FK NDT+GH GD Sbjct: 463 KNLSYRDQLTQIPNRRYFDEKYHE-AWDAALMNKSPIAVMYLDIDYFKLYNDTYGHEAGD 521 Query: 336 QVIKTVVNIIGKSIRP-DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 + +K V I + I+ D +AR+GGEEF +L + E LAE+ R +E L + Sbjct: 522 ECLKLVAQSIEEIIQSCDGFVARMGGEEFIAVLLNQSPESIYQLAEKCRTMIEGLNIPHE 581 Query: 395 EYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 + +VT+SIGA ++ NA ++ AD LYEAKE GRN + +++ +P Sbjct: 582 NSKVSNRVTLSIGAAMSVANAKGKAADLISEADECLYEAKENGRNSIYIKNAAGTVSTP 640 >UniRef50_B6BKZ4 Sensory box/ggdef family protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKZ4_9PROT Length = 505 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 109/174 (62%), Gaps = 4/174 (2%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 S ++ + I+ D LTNI+NR +F N ++++ C +IMD+DHFK+ NDT+G Sbjct: 324 SDKKMIEKISITDGLTNIYNRRHFDNLFPQIIKTSRRNNELVCFLIMDVDHFKQYNDTYG 383 Query: 331 HPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 H +GD V+ + ++ ++ R DD R+GGEEFGVL ++A+ +A ++RE++E L Sbjct: 384 HQMGDGVLIDLATVLTNNLKRDDDYCFRLGGEEFGVLFKSDSKQKAEIIANKLRESIEDL 443 Query: 390 TGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 ++ + VT S+G V + ++ ++ ++Y++AD+ LY+AKE GRNKV + Sbjct: 444 KIEHKGNSASSFVTASVGLVCLKAQDIVDEAQVYKMADDLLYQAKENGRNKVCI 497 >UniRef50_Q47IV4 GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IV4_DECAR Length = 412 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 15/177 (8%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 A +V + +A++D LT + NR +F E +Q A + P V + D+D FKK+NDT+G Sbjct: 242 QARQVLEKLANKDGLTGLMNRRFFMQSAEAELQRAQRYRRPVTVAMADLDFFKKLNDTYG 301 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD V+ +++ S R DL+ R GGEEF L +I A+ALAER+R + Sbjct: 302 HAAGDAVLCAFADLVRDSSRQSDLVCRYGGEEFAFLFPEISPTEAEALAERLRASCA--- 358 Query: 391 GDNPEYAIPQ----KVTISIGAVVTQENALNPNEIY-RLADNALYEAKETGRNKVVV 442 N E +P KVT+S+G E P EI + AD+ALYEAK GRN+VV+ Sbjct: 359 --NAEIGLPDGRTVKVTVSMGLADASE---CPIEIALKHADDALYEAKRLGRNRVVL 410 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 94/164 (57%), Gaps = 6/164 (3%) Query: 284 RDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 RDPLT ++NR + L + A AQ P +M++DIDHFK++NDT GH GD +++ + Sbjct: 214 RDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRINDTHGHAAGDAMLQAL 273 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT-GDNPEYAIPQ 400 ++ + +R DL R+GGEEF +LL + A+ AE +RE E L +PE Sbjct: 274 AQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREAFEALQVRHDPEVL--- 330 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 T+S G ++A P + AD ALY AK GRN+VVV+D Sbjct: 331 SATLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVVQD 374 >UniRef50_A4SJ18 GGDEF domain protein n=3 Tax=Aeromonas RepID=A4SJ18_AERS4 Length = 626 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 98/180 (54%), Gaps = 4/180 (2%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDH 321 M + ++ + R + +A D LT I NR E+ + A P CV+I+DIDH Sbjct: 446 MGMLALYLLNRSRKLRQLAMTDELTGIHNRRQIQAKGEVLFRQARDNGKPLCVLILDIDH 505 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK+VNDT GH +GD+V+ V + IG +R D + R GGEEF VLL D E A +AER Sbjct: 506 FKQVNDTLGHHMGDRVLTAVASCIGAQMRHLDRVGRHGGEEFLVLLPDTRMEEALEVAER 565 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IR V RL + P V+I + +L ++ + AD A+Y AK+ GRN+V+ Sbjct: 566 IRHEVSRLHIEEMPEGHPVHVSIGCAECSLLDESL--GDLIKRADEAMYRAKQAGRNQVM 623 >UniRef50_C8SJ15 Diguanylate cyclase n=2 Tax=Mesorhizobium RepID=C8SJ15_9RHIZ Length = 253 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 91/159 (57%), Gaps = 8/159 (5%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 A RD +T + NR FF L + + ++I+D DHFKK+ND++GH GD + + Sbjct: 89 ASRDDMTGMLNRESFFAALDGSRRKSDRG--ALLIIDADHFKKINDSFGHLTGDDALLLI 146 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP--EYAIP 399 + I + +R D+L R+GGEEFG L + AK +AERIR VE L P E IP Sbjct: 147 ASAIERGVRHGDVLGRIGGEEFGAFLVGATEQEAKRVAERIRREVE-LIRFRPVDERTIP 205 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 +T+SIG V E A N +E+ R AD LY+AK GRN Sbjct: 206 --LTVSIGGTVCGEEA-NVSELMRAADRRLYQAKHAGRN 241 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 11/199 (5%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT 310 +S ++ S L M + H+ + + I+ D LT + NR F + L + + T Sbjct: 163 VSENADIHSSLKSMDQELNHLRAEITELSVISLTDKLTGLNNRRAFESRLAQEFLPS--T 220 Query: 311 PYC-VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 P C ++++DIDHFK+ NDTWGH GD+V+ V + ++++ +DL+AR GGEEF ++L D Sbjct: 221 PKCSLLVIDIDHFKQFNDTWGHNAGDKVLVYVAQNLKQAVKGEDLVARYGGEEFVIVLKD 280 Query: 370 IDTERAKALAERIRENVER----LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLA 425 E A +AE++R+ + L DN + KV++SIG N P + + A Sbjct: 281 TSAEDAANIAEKLRDRIANKKLTLKKDNLDLG---KVSVSIGVAKAYANE-TPEQFFERA 336 Query: 426 DNALYEAKETGRNKVVVRD 444 D ALY AK TGRN+V + D Sbjct: 337 DGALYRAKGTGRNRVCLAD 355 >UniRef50_Q0AG42 Diguanylate cyclase n=2 Tax=Nitrosomonas RepID=Q0AG42_NITEC Length = 551 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 100/163 (61%), Gaps = 4/163 (2%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT ++NR L+ Q A ++ P+C++++DID+FK +ND GH VGD+++ TV Sbjct: 391 DGLTGLYNRTKLDTILSEQLARFKRHDRPFCLLMIDIDYFKTINDKLGHIVGDRILVTVA 450 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 +++ KSIR D AR GG+EF V+LT+ ++ A AERIR V E+ P + Sbjct: 451 SVLLKSIRTIDYAARYGGDEFVVILTETNSSAAIKTAERIRAEVNSACLAFKEH--PAHI 508 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 T+SIG + + + PN++ AD ALYEAKE+GR++V D Sbjct: 509 TLSIGITQSYYDDITPNDLIARADAALYEAKESGRDRVHCADA 551 >UniRef50_D1B1W8 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B1W8_SULD5 Length = 458 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 96/164 (58%), Gaps = 8/164 (4%) Query: 281 IAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 ++ D LT I+NR L Q A ++T CV+++DIDHFKKVNDT+GHP+GDQV+ Sbjct: 299 LSETDLLTKIYNRMKIEKLLLTLTQEAHQKRTFLCVLLLDIDHFKKVNDTFGHPIGDQVL 358 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 + +I S+R D L R GGEEF ++ + E + ER++E V++ E+ Sbjct: 359 IQMATLIKISLREGDFLGRWGGEEFLMICPNTSLEEGFKIGERLQECVKK-----AEFPT 413 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 Q T+SIG + E + I R ADNALY AK++GRN V V Sbjct: 414 QQHHTVSIGVAMLHEEESAYDVIVR-ADNALYHAKKSGRNNVCV 456 >UniRef50_Q2BPL4 Signal transduction histidine kinase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPL4_9GAMM Length = 427 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 5/162 (3%) Query: 285 DPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT +FNR F ++ ++ A + + +C++I+DIDHFK+ NDT+GH GD+V+K + Sbjct: 264 DSLTGLFNRRNFEYLSDSLIERAKRENSFFCLIILDIDHFKQYNDTYGHLEGDEVLKKIS 323 Query: 343 NIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 + K++ R +D RVGGEEF V+ T+ A ALAERI+ VE L + Q Sbjct: 324 QTLRKNVRRGNDYCFRVGGEEFAVIFTERTKGAATALAERIKNEVESLAIPHKHNGASQY 383 Query: 402 VTISIGAVVTQE-NALNP-NEIYRLADNALYEAKETGRNKVV 441 VTIS+G ++T++ +P + IY+ D LY+AKE+GRNK++ Sbjct: 384 VTISLGLMMTKDFTDEDPISAIYQHTDELLYKAKESGRNKLI 425 >UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales RepID=B4RZE8_ALTMD Length = 325 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 106/191 (55%), Gaps = 9/191 (4%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCV 314 V++ + + M H+ L+ + D LT +FNR Y+ F+E+ K P Sbjct: 138 VTEQALGKLGMEHLNQELKTASRV---DGLTGLFNRRYWQERFDEMYKLCVRRDK-PSTA 193 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++DIDHFK++NDT+GH GD+VIK + +I + +R DL R GGEEF ++L D E Sbjct: 194 VMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSTVED 253 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A+ +AERIR+ +RL ++ +I T+S+G P AD ALY+AKE Sbjct: 254 ARIVAERIRQLAQRLVVEHEGESI--NFTVSLGLAQFCSAFKGPLAWLECADKALYDAKE 311 Query: 435 TGRNKVVVRDV 445 +GRN+ V D Sbjct: 312 SGRNQYRVYDT 322 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 105/177 (59%), Gaps = 6/177 (3%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVN 326 H+ LR TKN A D LT +FNR F F++L + + P+ ++I+DID FK++N Sbjct: 177 HLRRELRDTKNKAEFDYLTELFNRRKFEEYFHKLLKEFNEGEGKPFSLIILDIDDFKQIN 236 Query: 327 DTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 DT+GH +GD+V+K + ++I + + AR+GGEEF +LL + + AK +AER+R+ V Sbjct: 237 DTYGHLLGDEVLKNLSSLIKTFLHSAHIPARIGGEEFAILLPETPLDEAKTIAERLRKTV 296 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 E T E + T+SIG Q+ + + + AD ALYEAK G+N V+ + Sbjct: 297 ENRTIPIAEGDL--NFTVSIGVAQVQKGD-TMDSLLKRADEALYEAKRNGKNMVIAK 350 >UniRef50_B2V5Y5 Diguanylate cyclase n=3 Tax=Sulfurihydrogenibium RepID=B2V5Y5_SULSY Length = 411 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/165 (43%), Positives = 101/165 (61%), Gaps = 15/165 (9%) Query: 285 DPLTNIFNRNYFFNELTVQS----ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 DPLT FNR F E+ +Q + P + + D+D+FKK+NDT+GH GD+ +K Sbjct: 255 DPLTGAFNRRGF--EIIIQKLLEISQITDAPITLAMADLDYFKKINDTFGHLAGDEALKH 312 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER--LTGDNPEYAI 398 VNII +++R D + R+GGEEF +LL + + + A + ERIR+++E L D E Sbjct: 313 FVNIIKRNLRKSDYVFRIGGEEFLILLPNTELKDAVEIVERIRKDLEENSLHYDGKEI-- 370 Query: 399 PQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 K+T S G A V +E + NEI + AD LY+AKE+GRNKVVV Sbjct: 371 --KITASFGLAEVDKEKYI--NEIIKKADEKLYKAKESGRNKVVV 411 >UniRef50_A8VWB4 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWB4_9BACI Length = 454 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 4/158 (2%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT FNR Y +L A ++T P V I+DIDHFKKVND +GH GDQV+KT Sbjct: 151 DELTGTFNRTYMKTKLHEMIAWYKRTEDPGSVAILDIDHFKKVNDRYGHATGDQVLKTFA 210 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 +I+ + R D++ R GGEEF VLL + E A+ + ER+R++VE D+ E V Sbjct: 211 DIMREETRESDIVCRYGGEEFVVLLPNTCPEDAETVIERVRKHVESTPHDSGEGIF--HV 268 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 T S G +P ++ AD ALY+AK GRN++ Sbjct: 269 TFSTGITFISSGDADPEQLVHQADQALYQAKNDGRNRI 306 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 15/217 (6%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI---AHRDPLTNIF 291 NI+L + YS S Y + +SK+ + + S+ R + A D LT ++ Sbjct: 198 NITLGILQLYSKSKNYFDEAL--ISKVKSYIEVAKPVISSKRTLHQLRKNATTDKLTKLY 255 Query: 292 NR----NYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 NR Y N+L + S QK V++MDID+FK++NDT+GH GD V+ T +I + Sbjct: 256 NRRFLEQYLDNQLEITGFSNQK--LSVIMMDIDNFKRINDTYGHNAGDAVLVTFARVILR 313 Query: 348 SIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV--ERLTGDNPEYAIPQKVTIS 405 +R DL+AR GGEEF +L DT+ A +AERIRE++ E + N + +P ++ S Sbjct: 314 CLRQTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKIN-DVQLPN-ISCS 371 Query: 406 IGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 G +A N N++ + AD ALY+AK+ G+N+V+ Sbjct: 372 FGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNRVIT 408 >UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG9_DESAH Length = 339 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 108/185 (58%), Gaps = 13/185 (7%) Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVND 327 + + L V+K A D LT + NR F + L Q + +C++++DIDHFK+VND Sbjct: 162 LASLRKKLDVSKKDAETDALTGLLNRRGFESRLHPLLKDPQ-SCFCLIMIDIDHFKRVND 220 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 T+GH VGD ++K + N++ + + D LAR GGEEF +LL + E+A A+AE IR+ + Sbjct: 221 TYGHLVGDSILKALANLLKQQTKGKDCLARFGGEEFIILLPETRLEQAGAVAEDIRKKLA 280 Query: 388 RLTGDNPEYAIP-QKVTISIGAVVTQENALNPNE-----IYRLADNALYEAKETGRNKVV 441 + P K+TIS+G VTQ PNE I+R+ D ALY AK GRN+VV Sbjct: 281 AQEWKQRKTGKPMGKITISLG--VTQ---YRPNESEVTLIHRV-DTALYTAKRNGRNRVV 334 Query: 442 VRDVV 446 ++V Sbjct: 335 TEEMV 339 >UniRef50_Q1N653 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N653_9GAMM Length = 378 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 95/164 (57%), Gaps = 4/164 (2%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQV 337 +A DPLT +FNR FF++ + S VM++DIDHFK VND +GH GD Sbjct: 201 GLASYDPLTGVFNRRGFFDQWQILSKRTHDKSCHLSVMMIDIDHFKHVNDKYGHEAGDAA 260 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K + +++ +R +D+LAR+GGEEF V+L ++ +A+ +AER+R + + Sbjct: 261 LKWLADLLAHELRENDVLARMGGEEFAVMLPGCESSQAEIVAERLRNCIFKTRFVYLNQV 320 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IP +TIS+G + + + + AD LY+AK+ GRN+ + Sbjct: 321 IP--ITISLGFITEDQPITDIKGLLVQADKGLYKAKDLGRNRAM 362 >UniRef50_C6HZU4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZU4_9BACT Length = 811 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 105/172 (61%), Gaps = 2/172 (1%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A RDPLT ++N+ F++ + ++ A + +P ++I+D D+FK +NDT+GH GD+V+ Sbjct: 389 ASRDPLTGLYNQRIFWDLMNYETGRADRHGSPSSLLIIDCDNFKVINDTYGHAAGDRVLV 448 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + II ++ R D++ R GG+EF V++++ D A AL +RI E V R + P+ P Sbjct: 449 GLARIIEEACRTGDIICRYGGDEFAVIVSEADVNSAHALGDRIHEAVRRARFEIPDAPYP 508 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 +++SIG +A + +++ +AD+ +Y AK+ G++ VV + + E+ Sbjct: 509 ATLSVSIGIASYPRHAKHARDLFVVADHMMYRAKKMGKDLVVEANEDDVAEA 560 >UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D1_HERA2 Length = 1774 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 6/167 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQS---ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + +A D LT + NR +FF EL + + P M++D+DHFK+VND++GH VGD Sbjct: 1610 QRLAITDSLTQVSNRRHFF-ELAERQWILTCSSDHPLSAMMLDVDHFKRVNDSYGHSVGD 1668 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 V++TV ++ ++RP DLL R GGEEF +LL D D A +AER+R + ++ + Sbjct: 1669 LVLRTVADLCRANLRPSDLLGRYGGEEFAILLPDTDVSAALTIAERLRVAIANHVINHEQ 1728 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +I V+I + + +N++ + AD LY AKETGR++V + Sbjct: 1729 ASINLTVSIGVTGLSKDDNSV--ASLLDRADRGLYIAKETGRDRVTM 1773 >UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNW0_RHORT Length = 360 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 4/169 (2%) Query: 274 ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPY--CVMIMDIDHFKKVNDTWGH 331 A R + +A DPLT + NR + + + P+ ++++D+DHFK +ND +GH Sbjct: 190 AARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLDLDHFKSINDRYGH 249 Query: 332 PVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTG 391 GD V+ V ++I IR +DL+AR+GGEEF +LL D D A+ +AE+IR+ +E Sbjct: 250 EAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVAEKIRKAIESTAL 309 Query: 392 DNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 P ++ VT+SIG + ++ AD+ LY+AK+ GRN+V Sbjct: 310 IGPGGSL--SVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRV 356 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 97/172 (56%), Gaps = 13/172 (7%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT + N F L A +++T + +++ DIDHFK VNDT+GHPVGD V+K V Sbjct: 590 DGLTGLTNHRAFQERLEQLHALSERTGQKFSIILTDIDHFKSVNDTYGHPVGDAVLKRVA 649 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV--ERLTGDNPEYAIPQ 400 I + R D++AR GGEEF ++L D D E A A R+RE + + +T DN ++ Sbjct: 650 AIFTRRARKVDIVARYGGEEFVLVLPDTDAEGAAVFANRLREEIAAQTITSDNGSFS--- 706 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 VT+S+G ++ +E+ LAD ALY KE GRN+ V C+ P Sbjct: 707 -VTLSLGVAEFPRDSTKRHELIELADQALYYCKEHGRNR-----VTKVCDLP 752 >UniRef50_Q0F2V6 GGDEF domain protein n=2 Tax=Proteobacteria RepID=Q0F2V6_9PROT Length = 450 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/183 (40%), Positives = 105/183 (57%), Gaps = 6/183 (3%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDH 321 M + M + + R+ K +A DPLT I+NR + L + + A +T VM+ DIDH Sbjct: 271 MALAMNNALTHDRLQK-LAALDPLTAIYNRRFGLARLNEEFSRAVRTTGHLGVMMFDIDH 329 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FKKVNDT+GH VGD+V+ V ++R D+L R GGEEF V+L E ++ + ER Sbjct: 330 FKKVNDTYGHLVGDRVLIQVTKTARAALREGDILMRYGGEEFLVILPVASKENSRDIGER 389 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAKETGRNKV 440 +R VE + + + I VTISIG E ++ + AD ALY AKE+GRNKV Sbjct: 390 MRHMVEETSVTDGDQVI--HVTISIGVTSYPELEVAGEQDLVKCADEALYLAKESGRNKV 447 Query: 441 VVR 443 +V+ Sbjct: 448 IVK 450 >UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TNG7_RICCO Length = 204 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 100/173 (57%), Gaps = 10/173 (5%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPV 333 R + +A DPLT IFNR F + + A+A+++ P +++DIDHFK++ND +GH Sbjct: 21 REIRTLAMTDPLTKIFNRRAFMIQAEKELAAAERSGLPLAFLMLDIDHFKQINDKYGHAA 80 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+V+ +V ++ +R D L R GGEEF LL D + A ALAE++R V + Sbjct: 81 GDEVLVRIVEVLSSHLRKQDTLGRYGGEEFCALLPGTDAQGAMALAEKLRLEVAMTRIEV 140 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYR----LADNALYEAKETGRNKVVV 442 E ++ +T+SIG + L P + YR AD ALY+AK GRN+ ++ Sbjct: 141 EENSL--GLTLSIGGSTWEH--LGPTKDYRELMEEADRALYQAKTGGRNRSLL 189 >UniRef50_Q1ZN19 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=Q1ZN19_PHOAS Length = 433 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/179 (36%), Positives = 107/179 (59%), Gaps = 14/179 (7%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFK 323 + F+ + ++ K RD +T+ + R+Y+ +L Q +C++I+DIDHFK Sbjct: 268 LTFFIYWLTEKIKTRKFSLQRDLMTHFYRRDYYEKKLHAQKG------FCLLIIDIDHFK 321 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 +NDT+GH VGD+VI+ + +G+ IR D+ R GGEEF + T + E+ K AE+IR Sbjct: 322 SINDTYGHEVGDEVIRKLAERLGRCIRQSDIAIRWGGEEFILSFTPMTKEQLKLKAEKIR 381 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 V+ +P + I VTISIG V+ + L+ +E Y+++D+ALY++K GRN+ + Sbjct: 382 HVVQV----SPIHNIA--VTISIGGTVS--DTLSFSEAYKVSDDALYQSKHNGRNQSTI 432 >UniRef50_Q07X09 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07X09_SHEFN Length = 388 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 8/171 (4%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPY--CVMIMDIDHFKKVNDTWGHPVGDQ 336 K +A DPLT+ FNR F++ + QK P C++ DID FK +ND +GH GDQ Sbjct: 219 KLLAMTDPLTDCFNRRGFYSHAKQKLLELQKQPQHACLIYWDIDKFKAINDQFGHAGGDQ 278 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ ++ +I + I+ DDL+ R+GGEEF +L+ + + A +AER+R + + P Sbjct: 279 VLISITQLIKQHIKKDDLIGRMGGEEFVILIERSNYQEAINVAERLRAMINQ----TPIV 334 Query: 397 AIPQK--VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 Q+ VT S G V + + LAD+ALY+AK +GRNKVV ++ Sbjct: 335 YCGQQISVTASFGVVELSNQDIPIEQAIDLADSALYQAKSSGRNKVVFSEL 385 >UniRef50_B6A0D1 Diguanylate cyclase n=2 Tax=Rhizobiaceae RepID=B6A0D1_RHILW Length = 435 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 9/171 (5%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +A DPLT I NR + L + ++T +++ DIDHFK +ND GH GD+ Sbjct: 248 ERLARTDPLTGIANRRWMMETLEGLWRNDRETGVVAAMLMCDIDHFKALNDKLGHGEGDR 307 Query: 337 VIKTVVNIIGKSIRPD-DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 + V II +R D DL++R GGEEF ++L D+D + A A+A+RIRE+VE NP Sbjct: 308 CLVKVAGIIQSCVRADRDLVSRHGGEEFLIVLPDVDEDEAIAVAKRIRESVEAAALPNPS 367 Query: 396 YAIPQKVTISIGAVVTQENALNPN----EIYRLADNALYEAKETGRNKVVV 442 + VT+S+G V ++AL+ + + AD ALY AKE GRN+V V Sbjct: 368 SGVGPSVTLSVG--VALKSALDADISLANLQHEADMALYRAKEAGRNQVCV 416 >UniRef50_C9NS82 Sensor histidine kinase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NS82_9VIBR Length = 385 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 96/167 (57%), Gaps = 16/167 (9%) Query: 284 RDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 +D LT ++NR L + +S K P V+++DIDHFKKVNDT+GH GD+V++T Sbjct: 227 KDELTQLYNRRALEELLPKEIARSSRHKQPLSVLLLDIDHFKKVNDTYGHQAGDRVLRTT 286 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 ++ R DDL R GGEEF VLL + D E+A +AE++RE ++R +P Sbjct: 287 GKLLILQTRKDDLSFRYGGEEFLVLLPNTDVEKAVIVAEKLREAIKR------ARMLPTN 340 Query: 402 V---TISIGAVVTQENALN--PNEIYRLADNALYEAKETGRNKVVVR 443 V T S G VTQ N + I R AD ALY AKE GRN+V R Sbjct: 341 VDSCTASFG--VTQFNGEDDWQTAIER-ADQALYSAKENGRNQVTAR 384 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 3/163 (1%) Query: 284 RDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 RDPLT +FNR Y LT + + P ++++DIDHFK+ NDT+GH GD V+K + Sbjct: 515 RDPLTTLFNRRYMEESLTREINRVTRNTYPIGILMIDIDHFKQFNDTYGHDTGDSVLKAI 574 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 + + +R D+ R GGEE ++L +++ + + AE+IRE V++L + + Sbjct: 575 GHFLQSQVRGSDIACRYGGEELILILPEVNLKETQNRAEQIREGVKKLQLKRGSQKL-NE 633 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +T+SIG + L + + AD ALY+AKE GR++VVV D Sbjct: 634 ITVSIGVACFPDQGLTGEIVIQAADAALYKAKEQGRDQVVVAD 676 >UniRef50_A4A8T9 GGDEF domain protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A8T9_9GAMM Length = 365 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 13/163 (7%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT NR F + L + A A +T P V+++D+DHFK ND +GHP GD ++ Sbjct: 197 DPLTGALNRRGFNDRLKAELAGAARTGTPLSVLMLDVDHFKHYNDAFGHPAGDVALRKTS 256 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + R +D ++R GGEEF ++L D E A +AER+R+ V +L G + Q++ Sbjct: 257 EALRACCRDNDSVSRYGGEEFALILPATDAEGAGIMAERVRQAVAKLEG------LKQEI 310 Query: 403 TISIG-----AVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 T+S+G A V + A+ + AD+ALY AKE GR++ Sbjct: 311 TVSVGAASAPAAVLTDLAMVATTLVAFADSALYRAKEGGRDRA 353 >UniRef50_B9JME5 Sensory box/GGDEF family protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9JME5_AGRRK Length = 578 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 5/173 (2%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASA--QKTPYCVMIMDIDHFKKVNDTWG 330 A R + +A +D LT + NR +F N L ++ A KT ++++D+D FK ND +G Sbjct: 398 DANRRLQALAEQDGLTGLANRRFFDNALLREAGRACQDKTSLGLLMIDVDWFKAFNDCYG 457 Query: 331 HPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 HP GD+ +K + I K + RP D+ AR GGEEF LL D D A A+AE+IR+ V L Sbjct: 458 HPAGDECLKRIGGTIQKIVSRPGDVAARYGGEEFAALLPDTDEPAAAAIAEQIRQAVLEL 517 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENAL-NPNEIYRLADNALYEAKETGRNKVV 441 ++ + Q TIS+GA E A+ P + AD ALY AKE GRN+V Sbjct: 518 AIEH-RVSPNQVATISVGAAALTEGAVTEPATLLHNADRALYRAKENGRNRVA 569 >UniRef50_B1I0Y3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Bacteria RepID=B1I0Y3_DESAP Length = 1338 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 5/155 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 ++++ DPLT ++NRNYF E+ ++ ++ P +++ D+D K VNDT GH GD ++ Sbjct: 990 RHLSLHDPLTGLYNRNYFEREMR-RAEGMRQVPVGIIVCDVDGLKLVNDTLGHDAGDALL 1048 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 ++ +S RP D++ARVGG+EF VLL + + RIRE VE NP A+ Sbjct: 1049 VATAGVLKRSFRPGDMVARVGGDEFAVLLPGSGRDVVEEAGNRIREAVETYNAANPGMAL 1108 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAK 433 ++S+G V E+ +N NE++R ADN +Y AK Sbjct: 1109 ----SVSVGFAVADESPVNVNELFREADNNMYRAK 1139 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 9/175 (5%) Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKK 324 M H+ L+ + D LT ++NR Y+ F+E+ +K P +++DIDHFK+ Sbjct: 151 MEHLNEELKTASRV---DGLTGLYNRRYWQERFDEMHKLCVRREK-PSTALMLDIDHFKR 206 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 +NDT+GH GD+VIK + +I + +R DL R GGEEF ++L D E AK +AERIR+ Sbjct: 207 INDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILNDSSVEDAKIVAERIRQ 266 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 +RL ++ +I T+S+G + AD ALYEAKE GRN+ Sbjct: 267 LAQRLVVEHEGESI--SFTVSLGLAQFSPDFKGAMAWLECADQALYEAKENGRNQ 319 >UniRef50_A3VUD9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VUD9_9PROT Length = 377 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 8/167 (4%) Query: 280 NIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 ++A DPL+ NR F + V+ + +++DIDHFK+VNDT+GH VGD+V Sbjct: 183 DLAMTDPLSGALNRRAFTILAQREVRRSLRHHNALSAVMVDIDHFKRVNDTYGHAVGDEV 242 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL--TGDNPE 395 I +V +I + R +DLL R+GGEEFG++L D D E+A + +R+ E + L TG + Sbjct: 243 IASVAALINRIKRQEDLLGRLGGEEFGLILPDTDIEQALRMTDRLIEAIRGLSFTGGSGT 302 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + ++T S+G + + +E R AD ALY+AKE GRN+V V Sbjct: 303 F----RITASLGVASLRGHDDPLSEFLRRADEALYKAKENGRNRVEV 345 >UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellular organisms RepID=Q1LHF7_RALME Length = 587 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 103/195 (52%), Gaps = 10/195 (5%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMD 318 L V+ + H +A R + +A DPLT + NR F + ++A Q+ TP ++++D Sbjct: 377 LRVVTLLFDHYLAAGRKLQQMAETDPLTQLANRRRFSEQFKKETARRQRDGTPLAMLMLD 436 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 ID+FK+VND WGH GD V+ + +++ K +R D AR+GGEEF VLL ++ A A Sbjct: 437 IDYFKRVNDKWGHASGDCVLMAMADLMRKHLREIDFPARLGGEEFAVLLPGASSDEAVAA 496 Query: 379 AERIR-ENVERLTGDNPEYAIPQ------KVTISIG-AVVTQENALNPNEIYRLADNALY 430 AER+R P+ P + T+SIG A + + + +AD LY Sbjct: 497 AERLRLAVEAAFVEAAPDAPQPDTGDGRIRFTVSIGVAEAGTDGCQTLDAMLAVADRRLY 556 Query: 431 EAKETGRNKVVVRDV 445 AKE GRN+V D Sbjct: 557 VAKEAGRNRVCATDA 571 >UniRef50_D2YPC6 GGDEF family protein n=1 Tax=Vibrio mimicus VM573 RepID=D2YPC6_VIBMI Length = 408 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 7/183 (3%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDID 320 +T+ + M +F + + + RD LT FNR YF E + + TPY V ++DID Sbjct: 225 ITLGTMLMLFLFEEIEWHRLRSIRDELTGAFNRRYF-KEQVQRQLNQSDTPYVVALVDID 283 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 HFK++ND++GH +GD VI VV + D L+AR GGEEF V + D ER K + Sbjct: 284 HFKQINDSYGHDMGDAVITFVVRKLESLNLTDCLVARYGGEEFAVFAREADAERVKEVLN 343 Query: 381 RIRENVER-LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 + + + + +N + KV++SIGAV+ + + E R AD+A+Y+AKE GRN+ Sbjct: 344 DVCDAISQGFCIENQQL----KVSVSIGAVLF-DTPFDYGEALRKADSAMYQAKEQGRNR 398 Query: 440 VVV 442 V+V Sbjct: 399 VMV 401 >UniRef50_C4V482 Possible diguanylate cyclase n=2 Tax=Selenomonas RepID=C4V482_9FIRM Length = 620 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 103/189 (54%), Gaps = 19/189 (10%) Query: 264 MVIFMCH--------IFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYC 313 M+ FM H + +A + +A RD LTN+ NR L V + AQKTP Sbjct: 427 MLAFMSHFIRVSEEELHTANQQLTQLAIRDTLTNLLNRREMERLLKEAVALSQAQKTPLS 486 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 V++MDIDHFK VND +GH +GD+V+ TV + I ++IR D R GG+EF ++L Sbjct: 487 VILMDIDHFKAVNDNYGHDMGDKVLLTVSDAISRTIRGSDAGCRWGGDEFFIILQGAPLA 546 Query: 374 RAKALAERIRENVERLTGDNPEYAIP--QKVTISIGAVVTQENALNPNEIYRLADNALYE 431 A + ERIR VE E +P VTIS+GA N ++++ AD ALY+ Sbjct: 547 VAGRVGERIRRRVE-------EAKMPFHHNVTISVGAAAFDPEQDNELQLFKNADEALYQ 599 Query: 432 AKETGRNKV 440 AK+ GRN V Sbjct: 600 AKKAGRNVV 608 >UniRef50_A6LZP4 Diguanylate cyclase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZP4_CLOB8 Length = 365 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 106/182 (58%), Gaps = 14/182 (7%) Query: 270 HIFSALRV---TKNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFK 323 +IF +R+ +N A +D LT + N F FN ++ Q A ++ ++ +DID FK Sbjct: 181 YIFETVRIYQKLRNEATKDYLTGLNNVREFDNSFNNIS-QRAVRKEEELSMLFIDIDFFK 239 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 K+NDT+GH GD ++K++ I+ + R D+++R+GGEEF ++L D +A +AER+R Sbjct: 240 KINDTYGHNAGDTILKSLALILLDTCRAYDVVSRMGGEEFSIILLDCSDSKAVKIAERLR 299 Query: 384 ENVERLTGDNPEYAIPQ---KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 E VE DN Y K+TISIG + + +AD ALY+AK TGRNKV Sbjct: 300 EKVE----DNDFYISDNKFIKITISIGIASYPNMTTQVDNLLEMADTALYQAKNTGRNKV 355 Query: 441 VV 442 V+ Sbjct: 356 VL 357 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 281 IAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A DPLTN+ NR FF + ++ + K+ +M++D+DHFK +ND +GH GD + Sbjct: 448 LARTDPLTNMLNRRAFFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNAL 507 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER--LTGDNPEY 396 +V N + IR D++ R+GGEEF V++ D E A LA+R+R +E+ + DN Sbjct: 508 LSVANTLKAMIRNVDIIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEIIIDNQ-- 565 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 P K+T G + + +E + AD ALY AKE GRN+V Sbjct: 566 --PVKITACFGVTSIDIKSESLDEALKRADKALYLAKENGRNRV 607 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 4/165 (2%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT I NR FF + + A + P V+++D+D FK+VND +GH GD V+ V Sbjct: 818 DPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMGCV 877 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 +++R D+L R+GGEEF +L + D + A A AER+R VE + D P + Sbjct: 878 QACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEM--DVPFSGQRLRC 935 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 T+SIG + ++I R AD+ALY AKE GRN+V++ VN Sbjct: 936 TVSIGLALRGPGDGALDDILRRADSALYAAKEAGRNRVMLARAVN 980 >UniRef50_A9D366 GGDEF family protein n=1 Tax=Shewanella benthica KT99 RepID=A9D366_9GAMM Length = 594 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 12/192 (6%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCV 314 + L V+ IF + R K +A D LT IFNR N E + ++++ + V Sbjct: 389 IFGGLVVLAIFALVMTVQKRKYKQLAQYDALTGIFNRGTAQNIAEYSFIKTASKREMFSV 448 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++ D+DHFK++ND +GH GD ++K V +I K+ R DD+ AR G EEF + L + D + Sbjct: 449 IMFDLDHFKRINDNYGHGTGDWILKKVAEVINKASRSDDVFARFGSEEFALFLPNTDEAK 508 Query: 375 AKALAERIR---ENVE-RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 AK +AE R +++E R +G N +AI T S G + E+ L+ + + AD A+Y Sbjct: 509 AKIMAEEYRGLIQSIETRFSGHN--FAI----TASFGVSTSSEDDLSLDPLLHRADIAMY 562 Query: 431 EAKETGRNKVVV 442 +KE GRN V + Sbjct: 563 HSKEQGRNCVTL 574 >UniRef50_C1DVZ5 Ggdef domain protein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DVZ5_SULAA Length = 826 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 109/194 (56%), Gaps = 3/194 (1%) Query: 247 STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS 306 ++ +E + L + + + K ++ +D LTN++NR Y T + Sbjct: 630 ENFFTKEKVEFIESLINAFSPFASTLNLIEINKELSLKDSLTNLYNRRYIIEFFTKEIGK 689 Query: 307 AQKTPY--CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 A++ Y V+++D+D+FKK+NDT+GH VGD +K V N+ S+R D++ R GGEEF Sbjct: 690 AKRLDYNIGVLVIDVDNFKKLNDTYGHLVGDLCLKKVSNVFLNSVREMDIVGRWGGEEFI 749 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 V+L D E +AERIR+ V P+ I +T+SIG V ++ N +++ ++ Sbjct: 750 VILPGSDEESTYQIAERIRKKVSSEVIFTPDNKILN-ITVSIGMAVYPKDGDNLDDLIKV 808 Query: 425 ADNALYEAKETGRN 438 AD LY+AK++G+N Sbjct: 809 ADEKLYQAKKSGKN 822 >UniRef50_B8DNJ7 Diguanylate cyclase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNJ7_DESVM Length = 569 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 103/203 (50%), Gaps = 19/203 (9%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVT--------------KNIAHRDPLTNIFNRNYFFNEL 300 + V+ L VI+ H S LR+ + IA RD LT FNR + Sbjct: 341 LAVLGTLLSAVIYTLHNHSQLRIIEGNNQALTRLNEELRRIAERDHLTGCFNRRRLDEAM 400 Query: 301 TVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARV 358 + A + ++ P + ++D+DHFK VND GH VGD ++ V II +R DLLARV Sbjct: 401 NAELARSARSGHPLALAMLDLDHFKAVNDQHGHGVGDAMLAHVTEIIRNQLREPDLLARV 460 Query: 359 GGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNP 418 GGEEF +LL D A L ER+R V+ + + IP +T+S G ++ + + P Sbjct: 461 GGEEFALLLPDTGEREAVTLLERVRRKVQETPLPHADGPIP--MTVSAGVAESRPD-IEP 517 Query: 419 NEIYRLADNALYEAKETGRNKVV 441 +AD ALY AK GRN+ V Sbjct: 518 GRWMHVADAALYMAKRCGRNRTV 540 >UniRef50_A8HRM0 Putative diguanylate cyclase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRM0_AZOC5 Length = 514 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 95/167 (56%), Gaps = 19/167 (11%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT I NR FF+ + AQ+ +P V+++DID FK +ND GH GD V++ + Sbjct: 333 DDLTGIANRRRFFDVAIREWQRAQRLGSPVAVLMIDIDRFKLLNDRLGHAAGDAVLQAIA 392 Query: 343 NIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER--LTGDNPEYAIP 399 +I S+ RP DL AR GGEEF +L D D A AERIR VER + GD+P Sbjct: 393 QLIRHSLRRPADLAARYGGEEFTAILPDTDMAGAFQTAERIRTQVERDVIRGDHP----- 447 Query: 400 QKVTISIGAVVTQENALNPNEIYR----LADNALYEAKETGRNKVVV 442 VT+SIG +PNE + AD ALY AKE+GRN+V+V Sbjct: 448 --VTVSIGIAAA---IASPNETFENVVAAADRALYRAKESGRNRVMV 489 >UniRef50_D2BVZ5 Diguanylate cyclase n=1 Tax=Dickeya dadantii Ech586 RepID=D2BVZ5_DICD5 Length = 514 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 20/204 (9%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS 304 +V WY + IE + ++ +M + H + + AH DPL+ + NR +++ Sbjct: 313 AVKAWY--QEIEQLKRVLLMGTVLLH--KRIGRLSSEAHTDPLSGMLNRRGMLE--SMEE 366 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 + V+ +DIDHFK +ND++GH VGD VI+ + I K+ R DL+ R+GGEEF Sbjct: 367 IRGEYKKVSVIAIDIDHFKSINDSFGHDVGDMVIRKLSQQIRKNFRKTDLVCRIGGEEFL 426 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIP----QKVTISIGAVV--TQENALNP 418 +LL D A +AER+R NV N Y +P +VTISIG Q++AL+ Sbjct: 427 ILLPGADIHVATVIAERLRNNVA-----NTVY-VPGSQHHQVTISIGVTTFNPQKSALDI 480 Query: 419 NEIYRLADNALYEAKETGRNKVVV 442 + ADNALY+AK GRN+VVV Sbjct: 481 --AIKTADNALYKAKNGGRNQVVV 502 >UniRef50_A6Q9K1 Signal transduction response regulator n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9K1_SULNB Length = 409 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 4/166 (2%) Query: 279 KNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K +A DPLT +FNR +F E ++ A T ++++DID+FKK+NDT+GH VGD Sbjct: 242 KKLASTDPLTELFNRRHFESLTEPFLELAKRNDTEIAIIVIDIDNFKKINDTYGHKVGDD 301 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 VI + I+ + R D++ R GGEEF +LL + + + +AE+IR+ VE L E Sbjct: 302 VIVDLATILKRGSRQSDIVCRWGGEEFIILLANTNGKSVLTIAEKIRKKVENLVR-TLED 360 Query: 397 AIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 K TIS G A+V +E+ + + + AD ALY+AK +G+NKVV Sbjct: 361 GNELKFTISCGVALVNKESNTSIHNVIDRADRALYKAKNSGKNKVV 406 >UniRef50_Q0ATH2 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Maricaulis maris MCS10 RepID=Q0ATH2_MARMM Length = 324 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/166 (42%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K +A D LT NR F L +QS A + P V+++D+DHFK VNDT GH GD Sbjct: 142 KRLAETDALTGAANRRAFMQYLEIQSQRATRDDIPLSVVMIDLDHFKSVNDTHGHATGDT 201 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ V I +R +D+L R+GGEEF V+L A ERIR VE +T E Sbjct: 202 VLIEAVKSIQACLRDNDMLGRLGGEEFCVILPGAGLFSAGIAGERIRAAVEAMTISTDE- 260 Query: 397 AIPQKVTISIGAVVTQENAL--NPNEIYRLADNALYEAKETGRNKV 440 +P VT S+G + L P+ + + AD ALY AKETGRNKV Sbjct: 261 GVPVPVTASLGVASLTDGDLISAPDTLLQTADVALYRAKETGRNKV 306 >UniRef50_A0KY43 Diguanylate cyclase n=3 Tax=Shewanella RepID=A0KY43_SHESA Length = 467 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 5/157 (3%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNI 344 DPL+ + NR F +LT + + Q Y V ++D+D+FK +NDT+G VGD+VI+ + + Sbjct: 312 DPLSGLLNRRGFMPQLT--NLNGQTVRYSVAMLDLDNFKMINDTYGDSVGDRVIQLLAQL 369 Query: 345 IGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTI 404 I R D+ AR+GGEEF ++L DID E+ + ERIR++ ++ E+ I T+ Sbjct: 370 IHNHSRSQDIAARLGGEEFALVLRDIDAEQVYPVLERIRKSFAEMSIAAEEHTI--YCTV 427 Query: 405 SIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 SIG V Q+ + + LAD ALY+AK G+N +V Sbjct: 428 SIGWVEYQQG-IAGESLLHLADKALYQAKAKGKNTIV 463 >UniRef50_Q0VMN2 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VMN2_ALCBS Length = 409 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 9/180 (5%) Query: 271 IFSALRVTKNIAHRDPLTNIFNR-------NYFFNELTVQSASAQKTPYCVMIMDIDHFK 323 + SA V +N A D +T NR N+ +++L ++ A + +++ DID FK Sbjct: 220 LHSANLVLENQATVDGMTGCINRRGMESRLNHLYHQLKQKTPDAPER-ITLILFDIDFFK 278 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPD-DLLARVGGEEFGVLLTDIDTERAKALAERI 382 + NDT+GHP GD+ +K V ++ ++ D D +AR GGEEF + L D A AER+ Sbjct: 279 QYNDTYGHPAGDECLKKVASVPLGMVQSDTDFVARYGGEEFVITLADSSFNDALVFAERM 338 Query: 383 RENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 R VE+L + I Q VTIS+G + NA N ++ ++AD ALY+AK +GRN+V + Sbjct: 339 RNRVEQLGIPHSGSRISQVVTISVGVACSDSNAENGGQLLKMADEALYQAKGSGRNRVAL 398 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/170 (40%), Positives = 100/170 (58%), Gaps = 5/170 (2%) Query: 275 LRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 L+ T+ + +D LT ++NR YFF E V + +M++DIDHFK+ ND++GH Sbjct: 197 LQQTRELIRKDELTGLYNRRYFFERFEREVYRSRRYGRTISLMMIDIDHFKEYNDSYGHL 256 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL--T 390 GD+V+KT+ I S+R D++AR GGEEF VLL + E A +AE++R+ VE++ Sbjct: 257 RGDRVLKTISRIFESSLRKIDVVARYGGEEFLVLLPETSRENAIRVAEKLRQAVEKVDFN 316 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 D P P +TI+IG ++A P LAD ALY K GRN+V Sbjct: 317 EDAPNLG-PCALTITIGVSAIPDDANEPILALDLADKALYMGKAQGRNQV 365 >UniRef50_B9L5N3 Ggdef domain protein n=1 Tax=Nautilia profundicola AmH RepID=B9L5N3_NAUPA Length = 549 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/174 (41%), Positives = 111/174 (63%), Gaps = 9/174 (5%) Query: 274 ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGH 331 L + N + +DPLTN+FNR + N L + A+AQ+ +++D+D+FK VNDT+GH Sbjct: 368 TLELLHNQSIKDPLTNLFNRRHLENILPMLIAAAQRRNEKLAFLMIDMDYFKTVNDTYGH 427 Query: 332 PVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT-ERAKALAERIRENVE--R 388 GD V+KT+ NI+ ++R D++ R GGEEF ++L +I + E A +AE+IR ++E + Sbjct: 428 KAGDTVLKTLANILINNVRKSDIVIRYGGEEFLIILQNIKSYEDAINIAEKIRTSIENTK 487 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + DN + QK TISIG + E+ E + AD ALY+AKE GRN+VV+ Sbjct: 488 IQLDN---TVIQK-TISIGISLFPEHCKQGWECIKYADIALYKAKENGRNQVVL 537 >UniRef50_Q21I36 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21I36_SACD2 Length = 434 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 7/202 (3%) Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF--FNELTVQ 303 VS IS I + ++T M + + L+V ++ RD LT+++NR F E + Sbjct: 105 VSQMIISAKIRAMERITDMRNQLATLNRELKV---LSQRDGLTHLYNRRTFEELAEKQWK 161 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEE 362 A+ K P V+++DIDHFK+ ND +GH GD+ I+T+ +++ K + RPDDL+ R GGEE Sbjct: 162 IATRNKAPLAVLLLDIDHFKQYNDYYGHQQGDRCIQTISSVLAKCVTRPDDLIGRYGGEE 221 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI-GAVVTQENALNPNEI 421 F +LL + A +AE+IR++VERL + VT+SI GA + Sbjct: 222 FIILLPNTPENGAHYIAEQIRKSVERLQIKHRASPSNTYVTVSIGGAALNYTTGTTWAHQ 281 Query: 422 YRLADNALYEAKETGRNKVVVR 443 LAD ALY AK +GRN ++ Sbjct: 282 VGLADKALYTAKASGRNTSTIQ 303 >UniRef50_C0QJ78 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ78_DESAH Length = 470 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 101/162 (62%), Gaps = 4/162 (2%) Query: 283 HRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 ++DPLT +NR + + + + T + ++ +D DHFK +NDT+GH +GD+ ++ Sbjct: 310 NQDPLTGAYNRRAYNQRIEDEMDRFLRYGTLFSLLFIDADHFKNINDTYGHAIGDKCLQE 369 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 ++ K IR D+LAR GGEEF +++ + D AK +AE+IR+ +ER+ + A+ Sbjct: 370 IIKRASKLIRKSDMLARYGGEEFVLVMPETDAANAKNVAEKIRKTIERIAFLYKKDAV-- 427 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 KVT+SIG +EN P ++ AD A+Y+AK+ GRN+VV+ Sbjct: 428 KVTVSIGVTQVRENDAVPQDVLGRADAAVYQAKQDGRNRVVL 469 >UniRef50_A1S9W6 Putative diguanylate cyclase (GGDEF domain protein) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9W6_SHEAM Length = 557 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 93/165 (56%), Gaps = 4/165 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELT-VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + + +A DPLT I NR F +L + +Q+ ++++DID FK +NDT GH VGD Sbjct: 393 LAQQLAATDPLTGIANRRAFSEQLQRLWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGD 452 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 +V+ + +I SIR D R GGEEF VLL E A +AERIR N+E L+ P Sbjct: 453 KVLTDIARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHNIESLSFPAPA 512 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 + KVT S+G V E +I R AD A+Y AK+ G N+V Sbjct: 513 NKL--KVTASVG-VCLDEGHSRHEDILRRADEAMYHAKDAGGNRV 554 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 98/178 (55%), Gaps = 16/178 (8%) Query: 274 ALRVT-KNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTW 329 ALR + ++ D LT + NR YF F SA + + P C++I DIDHFK ND Sbjct: 350 ALRAELQRFSYEDSLTGLKNRRYFDELFRHEREVSARSDR-PLCLLIFDIDHFKLFNDCH 408 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR-----E 384 GH GDQ ++ V +++ R D + R GGEEF VL+ + A+ AE++R E Sbjct: 409 GHEAGDQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMPGASLDEARQRAEQLRAAISAE 468 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VE G+N +TIS G +EN +E++R AD ALY+AKETGRN+VV Sbjct: 469 PVEH-RGEN-----LGSLTISAGIACWRENCPEFDELFRAADQALYQAKETGRNRVVA 520 >UniRef50_C7DA12 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DA12_9RHOB Length = 459 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 94/166 (56%), Gaps = 5/166 (3%) Query: 280 NIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 N A DPLT +FNR Y L + A + VM++DIDHFK VND +GH GD V Sbjct: 287 NAAVTDPLTGLFNRRYAMPHLERIAERAKESGREFAVMMLDIDHFKSVNDKYGHRAGDAV 346 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 + V + ++R DL+ARVGGEEF V L + E A+ A+R+R V+ P+ Sbjct: 347 LIEVARRLRNNLRLIDLIARVGGEEFLVTLPETTQEEAEIAAQRLRSVVDDTPFHIPQLG 406 Query: 398 IPQKVTISIGAVVTQENA-LNP--NEIYRLADNALYEAKETGRNKV 440 +P VT+SIG ++ + A L P + ++ AD ALY AK GRN V Sbjct: 407 MPVPVTLSIGVAMSGDEALLTPPFDHLFGRADAALYSAKNAGRNTV 452 >UniRef50_A9FJ67 FHA and GGDEF domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJ67_SORC5 Length = 310 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 5/167 (2%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 + A RD LT FN+ YF + L + + A++ +++ D+DHFK++NDT+GH GD V Sbjct: 141 DAALRDALTKAFNKKYFLDRLETEVSYARRHGAHLSLLMFDVDHFKRINDTFGHLAGDYV 200 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 + + I ++R +D+ AR GGEEFG+L + E A L ER+R +E ++ Sbjct: 201 LARIAKIASHTVRTEDVFARYGGEEFGILCRGVGLENAGILGERLRLLIEGSVFEHEGVR 260 Query: 398 IPQKVTISIGAVVTQENALNPN-EIYRLADNALYEAKETGRNKVVVR 443 +P TIS+G E A+ E+ AD ALYEAK TGRN+V+++ Sbjct: 261 MP--TTISVGVAAHPELAVQTGMELIAAADEALYEAKRTGRNRVLLK 305 >UniRef50_A8G0E2 Diguanylate cyclase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G0E2_SHESH Length = 340 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 53/288 (18%) Query: 157 FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGL 216 FVF PI++++L L NGQ V TL V+L L Sbjct: 101 FVF--PILSYLL-------------LGRRNGQAV--------------TLCYVSLGLGIL 131 Query: 217 RYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR 276 + +W I A + N SL + + V+ Y S+ EVV +L Sbjct: 132 GWRLWLNDPNIHLVA-MANYSLCVAAIWGVAHVYESKREEVVERL--------------- 175 Query: 277 VTKNIAHRDPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 +N+A RDPLT ++NR + F ++T QS S+ + ++++D+DHFK VND +GH V Sbjct: 176 --QNMAARDPLTGLYNRLHLESVFEQIT-QSESSPDSSLFMLLIDLDHFKSVNDNYGHEV 232 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+V+ V +I ++I +D RVGGEEF +LL + + +A+R++ +E Sbjct: 233 GDKVLVRVAELIKQTIGENDWGFRVGGEEFCLLLPGTNHASVQEVAQRLQLAIEGSAVSV 292 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 E+ + T SIG E+ +YR AD LY AKE GRN VV Sbjct: 293 GEHKV--STTASIGIAQWPESGELMQALYRTADRRLYRAKEQGRNCVV 338 >UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium extorquens group RepID=B7KW39_METC4 Length = 574 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 7/166 (4%) Query: 279 KNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 +N A RDPLT ++NR Y + L V+ A + V+++D+DHFK++ND GH GD Sbjct: 388 RNQALRDPLTGLYNRRYMEDSLERYVRLAEREGRKVSVIMIDLDHFKRLNDEHGHATGDA 447 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ I ++R D+ R GGEE V L D D E A A AE+IR +E L+G + Sbjct: 448 VLCEAAAAIVGALRETDVACRYGGEEMIVFLPDCDLEDAAAKAEQIRGRIESLSGTH--- 504 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 KV+ S+G + E+ R AD ALY AK GRN+V V Sbjct: 505 --GAKVSASLGVASVPSTSGTSAELIRAADTALYRAKHNGRNQVAV 548 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 9/167 (5%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQV 337 IA DPLT ++NR F ++ + AQ++ P+ +++ D+DHFK+VND +GH VGD+V Sbjct: 224 EIARIDPLTGLYNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEV 283 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR---ENVERLTGDNP 394 ++ N + + IR D++AR GGEEF +LL DTE+ +AE++R + + GD+ Sbjct: 284 LRRFANTLKEHIRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGDD- 342 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 + ++ S G + + + ADNALY AK+ GRN+VV Sbjct: 343 ---VCLTLSASFGVAHYDSSDREWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_A9D3L2 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D3L2_9RHIZ Length = 257 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 97/158 (61%), Gaps = 5/158 (3%) Query: 285 DPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D +T ++NR YF L + + + P ++I D+DHFK+VNDT GH VGD+V++ V Sbjct: 100 DSMTGLYNRRYFDEALGEYLNAFRSINKPIGMVIFDLDHFKQVNDTHGHDVGDEVLRQVA 159 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + R D++AR+GGEEF +L +I + ++LA+RIR V +LT ++ A+ +V Sbjct: 160 ECLHMFTRYHDVVARLGGEEFAILSPNISDRQLRSLADRIRLAVSQLTVESGNVAL--RV 217 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 TIS G + + +E+YR AD LYEAK GRN+V Sbjct: 218 TISAG-IAIWDGTERGDELYRRADRQLYEAKRQGRNRV 254 >UniRef50_C6DKF8 Diguanylate cyclase n=5 Tax=Pectobacterium RepID=C6DKF8_PECCP Length = 489 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 11/178 (6%) Query: 275 LRVTKNIAHRDPLTNIFNRNYFFNELTVQSA---SAQKTPYCVMIMDIDHFKKVNDTWGH 331 +++ ++ + +D LTN FNR F + L + + +K ++ +DID+FK+VNDT+GH Sbjct: 313 IKIIESNSLKDALTNTFNRRAFLSMLNGRQGLLMNKRKRQLTLLFLDIDYFKQVNDTYGH 372 Query: 332 PVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR---ENVER 388 GD++I + ++ +IRP D+L R GGEEF + D+ E++ A+AE +R E+ Sbjct: 373 ASGDELIASFARMLSANIRPSDILCRWGGEEFVIAAYDLTAEQSAAMAETLRHLTESTPL 432 Query: 389 LTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 + D E + TISIG V Q N ++ LAD LY+AK GRN+V +R V Sbjct: 433 VLSDGREI----RFTISIGVVTFPQYEGGNTYDLIGLADEQLYKAKAQGRNRVCLRLV 486 >UniRef50_A5PEH1 Putative diguanylate cyclase (GGDEF) n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEH1_9SPHN Length = 408 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 9/205 (4%) Query: 242 SRYSVSTWY--ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 Y S +Y ++ ++ + + + MV+ ++ ++ K A D LT + R F + Sbjct: 177 GEYRESIYYSVLNLSLSIAALMCAMVLVGACVYDQIKSVKERAEMDLLTGLRTRRAFEQD 236 Query: 300 L--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 + V+ A + P +++ DIDHFK VND WGH VGD+ I ++ +IR D+ R Sbjct: 237 VIAQVEKAKLEGVPVSLVVADIDHFKAVNDVWGHQVGDKAIAAFGQVVTDTIRDTDIAGR 296 Query: 358 VGGEEFGVLLTDIDTERAKALAERIREN-VERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 +GGEEF VL + D E A ++AERIR+ E PE ++T S G V + Sbjct: 297 IGGEEFCVLAWNCDGEAAISMAERIRKCFAETQVEGMPE---DHRLTASFG-VAGRNEGE 352 Query: 417 NPNEIYRLADNALYEAKETGRNKVV 441 +++ AD ALY AKE GRN+ V Sbjct: 353 GYGKVFARADAALYTAKEEGRNRTV 377 >UniRef50_B8CXG9 Diguanylate cyclase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXG9_HALOH Length = 499 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 12/172 (6%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + + +A+RD LT ++N YF N L + K P ++IMDID+FK+VND +GH VGD Sbjct: 334 KKQEEMANRDGLTGLYNHAYFQNRLHLLLKQENKHPLTLIIMDIDNFKQVNDRFGHLVGD 393 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 +V+K + +++ ++R DL+AR GGEEF ++L + + ++ + +A+R+R +L DN E Sbjct: 394 KVLKELAHLLKHNLREGDLIARYGGEEFAIILPETELKQGEFIAKRLR----KLISDN-E 448 Query: 396 YAIPQK----VTISIGAVVTQENAL-NPNEIYRLADNALYEAKETGRNKVVV 442 + +T+SIG V Q N + E AD ALY+AKE G+N+V + Sbjct: 449 IVLDNNRSLYITVSIG--VAQYNKKWSQEEFIDKADQALYKAKEAGKNRVTL 498 >UniRef50_C6HZZ1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZZ1_9BACT Length = 825 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 101/159 (63%), Gaps = 5/159 (3%) Query: 284 RDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 RDPLT +FN+ F+ L + A++ T + V ++D+D FK+VNDT+GH VGD+ +K + Sbjct: 403 RDPLTRLFNQRVFWELLDYEVGRAKRHDTSFAVCVVDLDDFKRVNDTFGHTVGDRYLKEM 462 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE--RLTGDNPEYAIP 399 ++ R D++AR GG+EF +L ++D A ++ +RIRE + R+ D P + P Sbjct: 463 AALLLSGTRQGDIVARYGGDEFAFVLPEVDLAGATSIVDRIREKIAMFRMDPDVPG-SPP 521 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 + ++SIG + ++A N +++ LAD +Y+AK++G+N Sbjct: 522 IEASVSIGIALYPDHASNAQDLFSLADRMMYKAKQSGKN 560 >UniRef50_B5SJ67 Signal transduction protein ggdef domain n=4 Tax=Ralstonia solanacearum RepID=B5SJ67_RALSO Length = 532 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 13/199 (6%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI-AHRDPLTNIFNRNYFFNELTVQ 303 +VS+WYI +L ++ + S+ N A DPLT ++NR + L + Sbjct: 323 TVSSWYIE-----AHRLKRALLRGTRLSSSRMARLNHEALTDPLTGLYNRRGVADALRLL 377 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 + Q P+ + +D+DHFK++ND GH VGDQV+K + +I + R DD+ R+GGEEF Sbjct: 378 AGRHQ--PFSAVTLDVDHFKRINDRDGHDVGDQVLKHIAALIREQARHDDITGRIGGEEF 435 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 +LL D E A AER+R VE NP Q VT+S+G + + + + Sbjct: 436 ILLLPDATPEGAFKTAERLRRAVE--ARPNP---TGQVVTVSLGVADYPGASEEVDAVLK 490 Query: 424 LADNALYEAKETGRNKVVV 442 L+D ALY+AK +GRN+ V+ Sbjct: 491 LSDLALYQAKRSGRNRTVL 509 >UniRef50_D2MBX0 Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MBX0_RHOPA Length = 411 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 78/194 (40%), Positives = 101/194 (52%), Gaps = 8/194 (4%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDI 319 TV VIFM A+ + K A DPLT I NR F ++ + P +I DI Sbjct: 198 TVFVIFMLVSERAVSMHKAAASLDPLTGILNRRGFSEACARMIEREAEAGRPVSALIFDI 257 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFK VND +GHP GD+V+K I+ S+R DL R+GGEEF LL + A A Sbjct: 258 DHFKSVNDRFGHPAGDEVLKLFAAIVSNSLRISDLCGRIGGEEFAALLP-CPIDEAVTAA 316 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 ER+RE + G + A P T+SIG V + + + AD ALY+AK GRN+ Sbjct: 317 ERVREAFQN-CGIEVDDA-PVATTVSIG-VAGGPAGVVLDVLLAAADTALYQAKRGGRNR 373 Query: 440 VV--VRDVVNFCES 451 VV V V+ ES Sbjct: 374 VVATVEQPVSLEES 387 >UniRef50_A6W207 Diguanylate cyclase n=2 Tax=Marinomonas sp. MWYL1 RepID=A6W207_MARMS Length = 452 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 7/163 (4%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQKTP-YCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 +A RD LT FNR + ++ + A A + + ++++D+DHFKK+ND +GH VGD V+K Sbjct: 295 LATRDKLTGTFNRYKWDEQIKDELALANRGHHFSLILLDVDHFKKINDGFGHDVGDNVLK 354 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 +VN + K +R D+L R+GGEEF +LL D + + A LAE++R+ + L E +P Sbjct: 355 LLVNTLRKRLRETDVLFRIGGEEFAILLRDTNLKDAGVLAEQLRKKINLLN----ENGMP 410 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 TIS+G V ++ + I + AD LYEAK GRN+VVV Sbjct: 411 -PFTISLG-VTDYQDFDDQTRIVKRADILLYEAKGAGRNRVVV 451 >UniRef50_A6Q2U9 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2U9_NITSB Length = 483 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/164 (40%), Positives = 97/164 (59%), Gaps = 11/164 (6%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 K+ A +D LT++FNR + L +++ + ++ DIDHFK ND +GH GD+V+ Sbjct: 330 KDAALKDSLTHLFNRRALKSFLKTLKPNSR---FGIIFCDIDHFKNFNDRYGHDKGDEVL 386 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 + V + K +R DD LAR GGEEF ++L +I E K AE++R+ +E ++ D P Sbjct: 387 QEVAKTLSKFVRKDDFLARWGGEEFLIVLPNISLEDLKNRAEKMRQAIENISKDIP---- 442 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VT S G V E+A + +E + AD ALY AKE GRN+V V Sbjct: 443 ---VTCSFGVTVC-EDASHIDECIKRADEALYRAKEKGRNRVEV 482 >UniRef50_C9NTP3 GGDEF domain protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NTP3_9VIBR Length = 603 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 4/164 (2%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 + DPLT I NR N + C+ +MD+DHFK++ND +GH +GD V+KT Sbjct: 439 LVREDPLTGILNRRALVNH--AEDIRRLNASSCICMMDLDHFKQINDNYGHAIGDSVLKT 496 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 ++ IR D+ R+GGEEF ++L + E A +LAERIR VE + + Sbjct: 497 FCTLVMSEIRDTDIFGRLGGEEFALILPETQLEDAASLAERIRSRVELQLVASLRSVVCS 556 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 KVT+SIG V ++ + AD LY AKE+GRN++ V++ Sbjct: 557 KVTVSIGVVEWLDDDF--AKALSSADKQLYMAKESGRNQIKVQE 598 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 24/232 (10%) Query: 227 IAFCAVLYNISLLFMSRYSVST-WYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI---- 281 IA + L ++S L + S WY++ + + S T++ + + + R + Sbjct: 221 IAALSHLCHVSHLLIDNTPFSANWYMAHLLSLFSFTTLLAVLILQLSQFTRDLADSHAYL 280 Query: 282 ---AHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 AH+D LT I+NR YF EL + A TP ++++DIDHFK ND +GH GD+ Sbjct: 281 MEKAHKDSLTGIYNRGYFDETAELEWRRAQRNGTPISLLMLDIDHFKGYNDQFGHVKGDK 340 Query: 337 VIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL---TGD 392 +K + + ++ RP D +AR GGEEF VLL E A+A+++ V++L GD Sbjct: 341 CLKKIAQALHANMQRPGDFVARFGGEEFVVLLPATTAEGCHAMAQKLHLAVQKLKISAGD 400 Query: 393 NPEYAIPQKVTISIGAVV---TQENALNPNEIYRLADNALYEAKETGRNKVV 441 + ++V++SIG EN + NE+ AD ALY AK GRN++V Sbjct: 401 H------RRVSVSIGHATWNGPYENG-SINELLSQADLALYTAKRLGRNRIV 445 >UniRef50_D2R258 Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R258_9PLAN Length = 779 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 8/163 (4%) Query: 282 AHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A RDPLT + NR F + VQS ++ P+ ++I DID+FK++ND +GH GD+V++ Sbjct: 420 ATRDPLTQVANRAEFDEIHATYVQSHRDRRLPFSLIICDIDYFKRINDNFGHQAGDEVLQ 479 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + ++ + RP DL+AR GGEEF +L D D A AE +R + P A+ Sbjct: 480 SFAALLRRHTRPGDLVARYGGEEFVLLCIDCDNTAATRRAEELRRELAEF----PMAALG 535 Query: 400 QK-VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 K +T S G V +N P + R AD ALY+AKE+GRN V+ Sbjct: 536 NKSITASFG-VTELQNGDTPETMLRRADRALYQAKESGRNTVI 577 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 11/165 (6%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT ++NR YF L ++ ++ P +++D DHFK++NDTWGH GD V+K + Sbjct: 183 DPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGHQAGDVVLKVLA 242 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ-- 400 + + +R D+ AR+GGEEF VLL + +AERIR + P + P Sbjct: 243 RRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRLAI----AGEPVHVSPDCV 298 Query: 401 -KVTISIGAVVTQENA--LNPNEIYRLADNALYEAKETGRNKVVV 442 +V++S+GA + A ++P + AD ALY+AK GRN+ ++ Sbjct: 299 LQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTML 343 >UniRef50_B0TH60 Ggdef domain protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH60_HELMI Length = 414 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 10/161 (6%) Query: 285 DPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 D LT ++N YF EL ++ P +++ DIDHFK NDT+GHP GD++++ + Sbjct: 250 DGLTGLYNHRYFQQCLQELM------KERPVTLLLFDIDHFKGFNDTYGHPCGDEILRQI 303 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 +I+ + P ++ AR GGEEF V+L D D R AE+IR+ V NP+ + Sbjct: 304 AHILRSQLGPQEVAARYGGEEFAVILPDADLRRGIERAEQIRQAVANFCFRNPDRTLCLN 363 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +T+SIG V + + + + AD ALY AKE GRN+V Sbjct: 364 ITVSIG-VSEKLAGWDKSRLIEAADRALYRAKEQGRNRVCA 403 >UniRef50_A7GXF8 3-deoxy-d-manno-octulosonic-acid transferase n=8 Tax=Campylobacterales RepID=A7GXF8_CAMC5 Length = 422 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 112/187 (59%), Gaps = 17/187 (9%) Query: 267 FMCHIFSALRVTKNI------AHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMD 318 +C + + + +NI A+RD LT+++NR YF++++T A A++T PY + ++D Sbjct: 240 LICRVNNTIEAMENINQIANFANRDFLTSVYNRRYFYDDMTQYLAKAEETAEPYAIAMID 299 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 IDHFK +NDT+GH GD+V++ + + + +D++AR GGEEF V+L +I E A Sbjct: 300 IDHFKNINDTYGHDSGDKVLQFLAKKLVDDTKGNDIVARFGGEEFCVVLKNISQEEAVKF 359 Query: 379 AERIRENVERLTGDNPEYAIPQKV---TISIGAVVTQENALNPNEIYRLADNALYEAKET 435 +R + N + ++ + V T+SIG V + + +E+ LAD ALY AKE+ Sbjct: 360 FVNLRAKIA-----NSKISLKKNVINFTVSIGVVFNRSD-YRLDELLELADEALYIAKES 413 Query: 436 GRNKVVV 442 GRN+V V Sbjct: 414 GRNRVEV 420 >UniRef50_A6Q428 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q428_NITSB Length = 609 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 4/160 (2%) Query: 285 DPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D +T +NR Y F + V A PY +M++DIDHFK VNDT+GH GD+VIK +V Sbjct: 440 DRMTGAYNRRYLDIFMKKNVPQALRANVPYTIMMLDIDHFKMVNDTYGHDAGDKVIKILV 499 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + I ++IR D++ R GGEEF VLL + E + +AE IR++ + D + I + Sbjct: 500 DTIKENIRKSDVVVRFGGEEFLVLLYNCHKEDSLQIAENIRKSFSKKRIDVGDEKIHK-- 557 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 T+SIG ++ +LAD ALY+AKE GRNK+V Sbjct: 558 TVSIGLCEFPKDTKQFWHAIKLADMALYQAKENGRNKIVA 597 >UniRef50_B6BII0 GGDEF domain/pas/pac sensor domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BII0_9PROT Length = 662 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 8/161 (4%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT I+NR+ E+ +Q A A++ + +++ DIDHFK VNDT+GH GD ++K Sbjct: 508 DSLTGIYNRHKTNEEIEIQLAKAKRYDEEFALVMFDIDHFKDVNDTYGHDAGDDILKEFS 567 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 +++ K IR D R GGEEF +LL +D + A +A++IRE V R + ++ Sbjct: 568 DVVLKHIRESDRFGRWGGEEFMLLLPKVDKDEAIRVADKIREFVSRYP-----FNKLSRI 622 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 T+S+GA + +EN + + R D ALY+AK +GRN+V+ + Sbjct: 623 TVSVGASIYRENDTKESLLKR-TDEALYQAKSSGRNRVIFK 662 >UniRef50_Q5LPU6 Diguanylate cyclase, putative/response regulator n=1 Tax=Ruegeria pomeroyi RepID=Q5LPU6_SILPO Length = 462 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 12/171 (7%) Query: 285 DPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DP+T + NR + EL + A+ P+ VM+ D+DHFK +ND +GHP GD V+ Sbjct: 293 DPMTGLSNRRHALPELDRILHEATETGQPFAVMLADLDHFKGINDRFGHPAGDAVLIETA 352 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN---PEYAIP 399 + +RP DLLAR+GGEEF ++L + +A A R+ R+ G+ P P Sbjct: 353 RRLRSQMRPGDLLARIGGEEFLIVLPGLSQTQALGAASRL---CSRINGEPFVVPGQLRP 409 Query: 400 QKVTISIGAVVTQENA----LNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 VT SIG V A L+ E+ AD ALY AK+TGRN+V + D Sbjct: 410 VPVTTSIGLVTVAPAAGAAQLSAGELIAHADRALYRAKDTGRNRVSLADAA 460 >UniRef50_Q8D5H8 FOG: GGDEF domain n=2 Tax=Vibrio vulnificus RepID=Q8D5H8_VIBVU Length = 607 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 4/160 (2%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 +A +D LT + NR +Q K C +MD+DHFK +ND +GH GD+V+K Sbjct: 438 LAQQDSLTGVLNRRALIEAANIQRRVNDKIGVC--MMDLDHFKTINDEYGHAAGDKVLKA 495 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 ++ + IR DL RVGGEEF ++L D + + +AERIR + E + G E Sbjct: 496 FCQLVSQEIRQQDLFGRVGGEEFCLVLPDANLAQTLLIAERIRLSAEMVLGSVLELGDDM 555 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 KVT+SIGA + Q N +AD ALY AK GRN+V Sbjct: 556 KVTVSIGATLWQ--CSNFERALFIADKALYRAKHEGRNQV 593 >UniRef50_B8CTE8 GGDEF domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTE8_SHEPW Length = 662 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 14/165 (8%) Query: 285 DPLTNIFNRNYFFNELTVQ----SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 DPLT FNR Y NE+ V S+ A + VMI DIDHFK+ NDT+GH GD V+K Sbjct: 468 DPLTQCFNRRYL-NEVIVSKLISSSKAGNSGVLVMI-DIDHFKQFNDTYGHAAGDNVLKE 525 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE--YAI 398 VV + +RP+D + R+GGEEF ++L D +A+ ERI + + R NP Sbjct: 526 VVKTLQADLRPNDNIVRLGGEEFLMVLPPSDNLNVEAVIERILQVINR----NPVIIEDK 581 Query: 399 PQKVTISIGAVVTQE--NALNPNEIYRLADNALYEAKETGRNKVV 441 P++VTISIG + ++ +A+ E+ LAD ALY AKE GRN+ V Sbjct: 582 PRRVTISIGYIPVEKVNSAVKVEELLILADKALYHAKECGRNRAV 626 >UniRef50_A8LJ58 Response regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LJ58_DINSH Length = 462 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/167 (38%), Positives = 100/167 (59%), Gaps = 14/167 (8%) Query: 285 DPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT ++NR + +L+ + A KT + V+++D DHFKK+ND +GH GD+V+ Sbjct: 294 DPLTGLYNRRFALGQLSNIAQEALKTHRTFAVLLLDFDHFKKINDAYGHAAGDKVLAETA 353 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ-- 400 ++ +R D++AR+GGEEF ++L D D + A+ +AER+R +++ D+P A+P Sbjct: 354 TLLRTRLRSLDVIARIGGEEFLMVLPDTDLDEARRVAERLRASID----DHP-IALPHGK 408 Query: 401 ---KVTISIGAVVTQENALNP--NEIYRLADNALYEAKETGRNKVVV 442 VTISIG + A +E+ AD ALY AK GRN+V V Sbjct: 409 GSIPVTISIGLAIGGAAAPEASVSELLETADRALYAAKSEGRNQVSV 455 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 8/170 (4%) Query: 278 TKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYC--VMIMDIDHFKKVNDTWGHPVGD 335 ++ A D LT + NR YF T++ A Q+ V+++DID FK+VND +GH GD Sbjct: 442 AEHFARIDMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDIDLFKQVNDRYGHAAGD 501 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 VI+ V + +S+R D +AR+GGEEF VLL I A A AER+RE + ++ Sbjct: 502 AVIRAVARLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAERLRERIAACVVEHDG 561 Query: 396 YAIPQKVTISIGAVVTQENALNP--NEIYRLADNALYEAKETGRNKVVVR 443 +++ T S G V+++ A +P + + R AD ALY AK+ GRN+VVV+ Sbjct: 562 HSL--GFTASFG--VSEQVADDPGFSSLLRRADQALYAAKQAGRNQVVVQ 607 >UniRef50_Q47MR9 GGDEF n=2 Tax=Streptosporangineae RepID=Q47MR9_THEFY Length = 448 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 4/164 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + A DP T + N + + A +T P V+I+DIDHFKKVNDT GH VGDQ Sbjct: 262 QTAARTDPKTGLLNAVAWERVAKTELTRALRTGCPLAVLIIDIDHFKKVNDTHGHLVGDQ 321 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ V ++ + +RP D++ R GGEEF VLL D A AER+R V R+ P Sbjct: 322 VLLNVATMLSQQLRPYDVIGRFGGEEFVVLLPGADMAEACRTAERLRTQVGRMA--QPIN 379 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 I VT+SIG + + + + E+ AD ALY AK++GR++V Sbjct: 380 DITITVTVSIGVALLRVHGRDLLELMAAADLALYRAKDSGRDRV 423 >UniRef50_A3WVM8 Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVM8_9BRAD Length = 264 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 27/246 (10%) Query: 215 GLRYDIWNGVTVIAFCAVLYNISLLF-MSRYSV--STWYI--SRTIEVVSKLTVMVIFMC 269 GL W V ++ L I+L F + YS W + S +V+ L + F Sbjct: 11 GLSTQSWTRVILLTIAGTLCCIALAFVIDSYSFVEGRWRLGPSPKDDVIIPLLIAPPFFL 70 Query: 270 HIFSALRVTKNIAHR--------DPLTNIFNRNYF-------FNELTVQSASAQKTPYCV 314 ++ S LR IAH D LT+ FNR F + + Q + + Sbjct: 71 YLLSKLRQLA-IAHEQLMVIASTDGLTSCFNRAAFTTLVDAYLDRVDRQEKGGEGA---L 126 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++MD+DHFK VND +GH +GD+ +K + I ++R DL+ R+GGEEF V L I +R Sbjct: 127 LVMDVDHFKNVNDNFGHDMGDEALKLIAQSIKSTLREVDLVGRMGGEEFSVFLPGIAPDR 186 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 +AERIRE V+ + + IP ++ISIG A + +E+Y+LAD LY+AK Sbjct: 187 VVMVAERIRETVKAV--NFCPQGIPCNLSISIGGATYVRTA-SFSELYKLADKLLYDAKR 243 Query: 435 TGRNKV 440 GR++V Sbjct: 244 QGRDRV 249 >UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X90_COLP3 Length = 364 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 105/175 (60%), Gaps = 12/175 (6%) Query: 274 ALRVTKNIAHR----DPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVND 327 +L + N HR D LTNI+NR YFF ++ + +A ++ P ++++DID FK+VND Sbjct: 192 SLEKSVNELHRLSIMDNLTNIYNRRYFFEMSKKLIATAFREQKPVSLIMLDIDLFKRVND 251 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 +GH GD ++ +V + K +R D+ AR+GGEEF +LL + E AK +AE++R +E Sbjct: 252 NYGHQAGDCILIDLVKELEKVMRKSDVFARIGGEEFTILLNNTSLEGAKVIAEKMRLTIE 311 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPN--EIYRLADNALYEAKETGRNKV 440 +I +TISIG V++ N N + ++Y+ AD LY AK GRN+V Sbjct: 312 NKVFIYNTTSI--DITISIG--VSELNTENTSIEDLYKQADKQLYRAKHKGRNRV 362 >UniRef50_Q1JXC4 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC4_DESAC Length = 637 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 8/162 (4%) Query: 284 RDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 RDP+T +FNR + ++ + +K +++ DID FK+VND +GH GDQV+K Sbjct: 468 RDPMTGLFNRRFLQDQAGHLIAGTLRRKKNIGLLMCDIDFFKQVNDQYGHDAGDQVLKET 527 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 II KS+R D++ R GGEEF V+LTDI+ A ++AE+IR N+E D P+K Sbjct: 528 SAIIQKSVRESDVVVRFGGEEFLVILTDIEAGDAMSVAEKIRSNIE----DKVFMVGPEK 583 Query: 402 V--TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 + TIS+G ++ + + AD ALY AKETGRN+ + Sbjct: 584 IRKTISLGVSEYPGDSEGFWQSIKYADVALYRAKETGRNRAL 625 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 10/163 (6%) Query: 281 IAHRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 IA D LT ++NR YF +T + A S + P ++++D+DHFKK+NDT+GH GDQ + Sbjct: 142 IALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLLMVDLDHFKKINDTYGHLAGDQAL 201 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 V ++ + R D + R GGEEF V+L + A +AERIR+ + +L + A Sbjct: 202 AAVALVLKEQSRISDTVCRFGGEEFAVILPETTNANAATVAERIRKKISQL-----DLAF 256 Query: 399 PQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 P +I +G A VT N L P+ + AD ALYEAK GRN+V Sbjct: 257 PVTASIGVGSAKVT--NQLLPDHLIAEADGALYEAKSQGRNRV 297 >UniRef50_C6V500 Response regulator/GGDEF domain protein PleD n=2 Tax=Neorickettsia RepID=C6V500_NEORI Length = 457 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%) Query: 285 DPLTNIFNRNYF---FNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 DPLT+++NR YF +EL +Q + +M++DID+FKK+ND GH GD V+K + Sbjct: 292 DPLTSLYNRYYFEKYMDELLATLTKSQNKTFSLMMIDIDYFKKINDACGHLSGDLVLKQL 351 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER--LTGDNPEYAIP 399 + +R +DL+A+ GGEE V+L DI E A A AERIR+ VE+ + N E +P Sbjct: 352 ATCLKGCLRLNDLVAKFGGEEIVVVLVDIGLEDAFATAERIRKTVEKTEFSTINDEVKVP 411 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +T+SIG Q I R AD LY AKE GRN+VV+ D Sbjct: 412 --LTVSIGVSEYQPQDTTKTLIGR-ADANLYIAKEKGRNRVVMSD 453 >UniRef50_C7I2H1 Diguanylate cyclase n=1 Tax=Thiomonas intermedia K12 RepID=C7I2H1_THIIN Length = 523 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 96/163 (58%), Gaps = 4/163 (2%) Query: 279 KNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 + +AH DPLT + NR FF E +++ A + C+M++D+DHFK++ND +GHPVGD+ Sbjct: 357 RALAHTDPLTGLQNRRGFFAMVEHALRTRPAGQPGPCIMLIDLDHFKQINDRYGHPVGDE 416 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 ++ ++ +R D+ AR+GGEEF +LL + +A +AER+RE V Sbjct: 417 ILVEFAQVVLSLLREGDVFARMGGEEFCILLAHMRASQALEVAERVREFVAAHPFQTSAG 476 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 + ++++S+G + + + +AD A+Y AK+ GRN+ Sbjct: 477 VV--RLSLSLGIAGCDAPVQSIDRVLSMADQAMYRAKQGGRNR 517 >UniRef50_Q1D1X1 FHA/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D1X1_MYXXD Length = 307 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 5/165 (3%) Query: 282 AHRDPLTNIFNRNYFFNELTVQSASA--QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A RD LT ++N+ YF + + + + P +++ D+DHFKK+ND +GHP GD V+ Sbjct: 140 ATRDGLTRVYNKKYFLETVRKEFSYCLRHRVPLSLVLFDVDHFKKINDAYGHPAGDYVLT 199 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + + ++R +DLLAR GGEEF ++L + ++A A AER R V++ D P Sbjct: 200 RIAQRVSDTVRTEDLLARYGGEEFALMLRESAEDQALACAERCRYAVDK--ADFVFSGTP 257 Query: 400 QKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 KVTIS+G A + + P ++ AD LY AK GRN+V + Sbjct: 258 IKVTISLGVATLLDSDFSQPEDLIAAADKYLYRAKRAGRNRVDAK 302 >UniRef50_A8EST0 GGDEF/PAS domain protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EST0_ARCB4 Length = 463 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 109/181 (60%), Gaps = 9/181 (4%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYF--FNELTVQSASAQKTPYCVMIMDIDHFKKVND 327 ++S + + A D LT IFNR F F +L VQ A QK P ++++DID FK++ND Sbjct: 284 ELYSMAQTLEQQASIDILTGIFNRMKFEEFFDLEVQKAKIQKNPLSIILLDIDDFKRIND 343 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 T+GH GD+VIK++ N++ K++R D L+R GGEEF +LL + E+AK +A +R Sbjct: 344 TFGHDEGDEVIKSISNLLTKNVRGTDTLSRWGGEEFVILLPNTSLEQAKIVANNLR---- 399 Query: 388 RLTGDNPEYAIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 R+ ++ +K+T S G A+ E+ ++++ D LY+AK +G+N V+ D + Sbjct: 400 RIIFEHDFNVSQKKITCSFGVAIYNYEDT--KEKLFKRVDKILYKAKNSGKNIVLGEDEL 457 Query: 447 N 447 N Sbjct: 458 N 458 >UniRef50_Q30RR7 Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RR7_SULDN Length = 427 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 18/218 (8%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAH---RDPLTNI 290 +N L + + + W SR + ++ L V + ++ + K +A D LT + Sbjct: 220 WNGELKYKTSKNQEKWLQSRVVPILD-LHGEVHELNAVYHDITNEKLLAELYITDSLTKL 278 Query: 291 FNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 +NR YF + V+ + + ++++DIDHFK +NDT+GH VGD+V+ + + S Sbjct: 279 YNRAYFDETINMIVKHQRKADSDFILVLVDIDHFKLINDTYGHQVGDEVLVAIAKTLKGS 338 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER-LTGDNPEYAIPQKVTISIG 407 +R +DL+AR GGEEF ++L +I AK + E++R N++ + DN KVT S G Sbjct: 339 LRDNDLIARWGGEEFVIMLKNITLNEAKTIIEKVRVNIQNSIIRDNI------KVTASFG 392 Query: 408 --AVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + E++ EI++ AD+ALYEAK+ GRN+VVVR Sbjct: 393 LTKYIINEDS---KEIFKRADDALYEAKKDGRNRVVVR 427 >UniRef50_C6RRW8 Diguanylate cyclase n=6 Tax=Acinetobacter radioresistens RepID=C6RRW8_ACIRA Length = 524 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 23/200 (11%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAH--RDPLTNIFNRNYFFNELTV 302 ++S WY V K + ++ FS ++++ H DPLT ++NR ++ + Sbjct: 337 AISPWYYE-----VQKFKLSLLLSAQNFSK-KISEMNHHVNSDPLTGLYNRRGI--DIFI 388 Query: 303 QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEE 362 + TP+ ++++D+D+FKK+NDT+GH GD V+K + + + R DD+ R GGEE Sbjct: 389 KEMVDNHTPFSILLIDVDYFKKINDTYGHIQGDIVLKQIAGHLRTNFRKDDICCRCGGEE 448 Query: 363 FGVLLTDIDTERAKALAERIRENVE----RLTGDNPEYAIPQKVTISIGAVVTQENALNP 418 F VL+ ID + AER+R+ +E L+G VTISIG E++ + Sbjct: 449 FAVLMPTIDKKAVYNSAERLRKKIESNITNLSG---------PVTISIGIAYWPESSKST 499 Query: 419 NEIYRLADNALYEAKETGRN 438 E++++AD+ LY+AK GRN Sbjct: 500 EEVFKIADHYLYQAKREGRN 519 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 12/173 (6%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 R + + DPLT I NR +F +L ++ + ++TP V+++DID FK +NDT+GH Sbjct: 442 RELEQLNMEDPLTGIKNRRFFDKKLVMELRRSRREQTPLSVIMLDIDKFKVINDTYGHLT 501 Query: 334 GDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE----R 388 GDQVI+T + I K + RP D +AR GGEEF VLL + + A A+AE+IR + Sbjct: 502 GDQVIRTAADTIKKQLQRPLDEVARYGGEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVH 561 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 + G + I V S+ E+ NP AD ALY AK+ GRN+V+ Sbjct: 562 VAGTTISFTISAGVYTSVA-----EDINNPEIFTERADKALYFAKQHGRNQVI 609 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75908 Inner membrane protein ycdT n=43 Tax=Enterobacte... 604 e-171 UniRef50_P76236 Inner membrane protein yeaI n=57 Tax=Enterobacte... 430 e-119 UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter ... 426 e-117 UniRef50_D0YJ51 Diguanylate cyclase n=1 Tax=Klebsiella variicola... 425 e-117 UniRef50_UPI0001C3436F predicted diguanylate cyclase n=1 Tax=Cit... 425 e-117 UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 T... 397 e-109 UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 384 e-105 UniRef50_UPI0001C34201 diguanylate cyclase n=1 Tax=Enterobacter ... 380 e-104 UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 T... 374 e-102 UniRef50_C1M4A3 Diguanylate cyclase n=1 Tax=Citrobacter sp. 30_2... 361 2e-98 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 318 2e-85 UniRef50_D0ZCJ5 Diguanylate cyclase n=1 Tax=Edwardsiella tarda E... 309 1e-82 UniRef50_B1LBA3 Diguanylate cyclase and serine/threonine protein... 290 9e-77 UniRef50_B5JWA7 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 261 4e-68 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 260 1e-67 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 255 2e-66 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 252 3e-65 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 252 3e-65 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 251 5e-65 UniRef50_C0QSJ8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 250 9e-65 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 250 1e-64 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 248 3e-64 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 248 3e-64 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 248 4e-64 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 6e-64 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 6e-64 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 1e-63 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 246 1e-63 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 246 1e-63 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 246 1e-63 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 246 1e-63 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 245 2e-63 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 245 3e-63 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 244 4e-63 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 244 4e-63 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 244 4e-63 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 244 6e-63 UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W... 244 6e-63 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 244 8e-63 UniRef50_Q3JE99 Response regulator receiver modulated diguanylat... 243 1e-62 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 243 1e-62 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 243 1e-62 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 243 1e-62 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 242 1e-62 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 242 2e-62 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 242 2e-62 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 242 2e-62 UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobact... 242 2e-62 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 242 2e-62 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 242 2e-62 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 242 2e-62 UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desu... 242 3e-62 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 241 4e-62 UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 ... 241 4e-62 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 241 4e-62 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 241 4e-62 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 241 5e-62 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 241 5e-62 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 241 5e-62 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 240 7e-62 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 240 7e-62 UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geoba... 240 8e-62 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 240 9e-62 UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii K... 240 1e-61 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 240 1e-61 UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromob... 240 1e-61 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 239 1e-61 UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL19... 239 1e-61 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 239 1e-61 UniRef50_C6XL77 Response regulator receiver modulated diguanylat... 239 1e-61 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 239 2e-61 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 239 2e-61 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 239 2e-61 UniRef50_B8FL29 Response regulator receiver modulated diguanylat... 239 2e-61 UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 239 2e-61 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 239 2e-61 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 239 2e-61 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 239 2e-61 UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum... 239 2e-61 UniRef50_Q2BQS0 GGDEF family protein n=1 Tax=Neptuniibacter caes... 238 3e-61 UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID... 238 3e-61 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 237 5e-61 UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium ext... 237 5e-61 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 237 6e-61 UniRef50_C4KD29 Response regulator receiver modulated diguanylat... 237 6e-61 UniRef50_A9FTP6 Glutamyl-tRNA synthetase n=3 Tax=Rhodobacteracea... 237 6e-61 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 237 7e-61 UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus... 237 8e-61 UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepI... 237 9e-61 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 237 9e-61 UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobact... 237 9e-61 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 236 1e-60 UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 ... 236 1e-60 UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, puta... 236 2e-60 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 236 2e-60 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 235 2e-60 UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales Rep... 235 2e-60 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 235 2e-60 UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 235 2e-60 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 235 2e-60 UniRef50_B1X1R3 Putative adenylate cyclase n=1 Tax=Cyanothece sp... 235 2e-60 UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneum... 235 2e-60 UniRef50_Q726K1 GGDEF domain protein n=3 Tax=Desulfovibrio vulga... 235 2e-60 UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 235 2e-60 UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax... 235 2e-60 UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 235 3e-60 UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nit... 235 3e-60 UniRef50_A3Y9Q2 Probable sensory transduction system regulatory ... 235 3e-60 UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D... 235 3e-60 UniRef50_A4SJ18 GGDEF domain protein n=3 Tax=Aeromonas RepID=A4S... 235 3e-60 UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=De... 235 3e-60 UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelo... 235 3e-60 UniRef50_Q0ATH2 Response regulator receiver modulated diguanylat... 235 3e-60 UniRef50_Q02P32 Putative two-component response regulator n=6 Ta... 235 3e-60 UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammapr... 235 4e-60 UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 234 4e-60 UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain... 234 5e-60 UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testostero... 234 5e-60 UniRef50_Q3A5K1 Two component signal transduction response regul... 234 5e-60 UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caes... 234 6e-60 UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma prote... 233 7e-60 UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 233 7e-60 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 233 9e-60 UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=N... 233 1e-59 UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfoc... 233 1e-59 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 233 1e-59 UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hy... 233 1e-59 UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S... 233 1e-59 UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum ... 232 2e-59 UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter di... 232 2e-59 UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwell... 232 2e-59 UniRef50_Q2SP63 Response regulator containing a CheY-like receiv... 232 2e-59 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 232 2e-59 UniRef50_A1HSJ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 232 2e-59 UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8F... 232 2e-59 UniRef50_C1D269 Putative metal dependent phosphohydrolase n=2 Ta... 232 2e-59 UniRef50_C7DA12 Response regulator receiver modulated diguanylat... 232 2e-59 UniRef50_B9JME5 Sensory box/GGDEF family protein n=3 Tax=Rhizobi... 232 2e-59 UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 232 2e-59 UniRef50_A8IQ43 Putative diguanylate cyclase (DGC) n=1 Tax=Azorh... 232 3e-59 UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax... 232 3e-59 UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocy... 232 3e-59 UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulo... 232 3e-59 UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellu... 232 3e-59 UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfo... 232 3e-59 UniRef50_Q21I36 Response regulator receiver modulated diguanylat... 231 4e-59 UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidima... 231 5e-59 UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus... 231 5e-59 UniRef50_Q2BLE7 Putative uncharacterized protein n=1 Tax=Neptuni... 231 5e-59 UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clos... 231 5e-59 UniRef50_C8Q4F0 Diguanylate cyclase n=5 Tax=Enterobacteriaceae R... 231 5e-59 UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 231 5e-59 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 230 6e-59 UniRef50_C6BSH8 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 230 7e-59 Sequences not found previously or not previously below threshold: UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 249 1e-64 UniRef50_B9Z462 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 244 4e-63 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 244 4e-63 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 244 6e-63 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 244 8e-63 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 243 1e-62 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 242 3e-62 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 241 3e-62 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 241 4e-62 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 241 4e-62 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 241 5e-62 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 240 8e-62 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 240 9e-62 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 240 1e-61 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 240 1e-61 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 240 1e-61 UniRef50_D1UJZ5 Diguanylate cyclase n=6 Tax=Burkholderiaceae Rep... 240 1e-61 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 239 2e-61 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 239 2e-61 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 238 3e-61 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 238 3e-61 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 238 3e-61 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 238 4e-61 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 237 6e-61 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 237 6e-61 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 237 7e-61 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 237 8e-61 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 237 9e-61 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 236 1e-60 UniRef50_C6MLA7 Response regulator receiver modulated diguanylat... 236 1e-60 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 236 1e-60 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 236 1e-60 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 236 1e-60 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 236 1e-60 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 236 1e-60 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 236 1e-60 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 236 2e-60 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 235 2e-60 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 235 3e-60 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 235 3e-60 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 235 3e-60 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 235 3e-60 UniRef50_A1WTZ7 Response regulator receiver modulated diguanylat... 235 3e-60 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 235 4e-60 UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 234 4e-60 UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 234 4e-60 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 234 5e-60 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 234 5e-60 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 234 6e-60 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 234 6e-60 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 234 6e-60 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 234 6e-60 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 233 7e-60 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 233 7e-60 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 233 7e-60 UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein... 233 8e-60 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 233 8e-60 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 233 9e-60 UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta ... 233 9e-60 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 233 1e-59 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 233 1e-59 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 233 1e-59 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 233 1e-59 UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors... 233 1e-59 UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzer... 233 1e-59 UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae R... 233 1e-59 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 232 2e-59 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 232 2e-59 UniRef50_D0IUU3 Diguanylate cyclase n=4 Tax=Comamonas testostero... 232 2e-59 UniRef50_C6MLU9 Response regulator receiver modulated diguanylat... 232 2e-59 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 232 2e-59 UniRef50_Q2BMK3 Serine/threonine kinase with two-component senso... 232 2e-59 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 232 2e-59 UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=... 232 2e-59 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 232 3e-59 UniRef50_Q0A9X2 Diguanylate cyclase n=3 Tax=Proteobacteria RepID... 232 3e-59 UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella Re... 232 3e-59 UniRef50_B5W1M1 Diguanylate cyclase with PAS/PAC and GAF sensors... 232 3e-59 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 232 3e-59 UniRef50_C7LVZ4 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 232 3e-59 UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 232 3e-59 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 232 3e-59 UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4... 231 3e-59 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 231 4e-59 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 231 4e-59 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 231 4e-59 UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geob... 231 5e-59 UniRef50_B5JSK2 Response regulator receiver protein n=1 Tax=gamm... 231 5e-59 UniRef50_Q3A8D4 Putative sensory transduction system, regulatory... 231 5e-59 UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 231 5e-59 UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with... 231 5e-59 UniRef50_C8QXT9 Response regulator receiver modulated diguanylat... 231 5e-59 UniRef50_Q7P127 Putative uncharacterized protein n=1 Tax=Chromob... 230 6e-59 UniRef50_C1DGF8 GGDEF protein n=1 Tax=Azotobacter vinelandii DJ ... 230 6e-59 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 230 6e-59 UniRef50_C4XGF2 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 230 7e-59 >UniRef50_P75908 Inner membrane protein ycdT n=43 Tax=Enterobacteriaceae RepID=YCDT_ECOLI Length = 452 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 452/452 (100%), Positives = 452/452 (100%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF Sbjct: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ Sbjct: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA Sbjct: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF Sbjct: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL Sbjct: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG Sbjct: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE Sbjct: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 Query: 421 IYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 IYRLADNALYEAKETGRNKVVVRDVVNFCESP Sbjct: 421 IYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 >UniRef50_P76236 Inner membrane protein yeaI n=57 Tax=Enterobacteriaceae RepID=YEAI_ECOLI Length = 491 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 168/446 (37%), Positives = 269/446 (60%), Gaps = 3/446 (0%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 M L+ S + SLL L L + + +N+ +++P+ YLMV++ALFF++ V F+F Sbjct: 48 MGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLF 107 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 M + + +++ +LSLAFLS LIY V T++II + I ND++I+Y+FRQ Sbjct: 108 MLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQ 167 Query: 121 MSLCILIFLALVNKVSENTKQRNLFS-KKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 +S L LAL +N N + L + F VF P++AH LSS+ Y+L++ Sbjct: 168 LSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVF--PLLAHNLSSYNADYSLYV 225 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 + +N W +Y I++ +W LL + L ++W + ++ ++ N+ LL Sbjct: 226 VDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLL 285 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + Y+ + WYISR IEV SKL V+ + +IF L+++ +A D LTNI+NR YFFN Sbjct: 286 TLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNS 345 Query: 300 LTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVG 359 + + +CVM++DI+ FK++N WGH VGD+V+ ++V+II +SIRPDD+LAR+ Sbjct: 346 VESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLE 405 Query: 360 GEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPN 419 GE FG+L T++++ +AK +AER+R+NVE LTG + Y +P+++TISIG V + + N + Sbjct: 406 GEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNIS 465 Query: 420 EIYRLADNALYEAKETGRNKVVVRDV 445 + AD AL EAK G NKV++ + Sbjct: 466 LVMTEADKALREAKSEGGNKVIIHHI 491 >UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter sp. 30_2 RepID=C1M322_9ENTR Length = 473 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 150/438 (34%), Positives = 244/438 (55%), Gaps = 7/438 (1%) Query: 7 RISSTVLVSLL-FGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYF 65 R+ + ++ L + L V + + + VP++ YL++++ LFF+ + F+FM + Sbjct: 40 RLMAFYIICLASYVLGGVCLTQF---KLTIQSVPQTVYLIIIVGLFFLYGIIFLFMLFQY 96 Query: 66 IYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCI 125 + + +L +AFL I+F+ T+ I+Q +I + + NDIAI+Y FRQ+S Sbjct: 97 LCRKDLTCLMILGMAFLGNNIFFIETIYIVQDLINDYASIEKRTNDIAIFYYFRQISFIA 156 Query: 126 LIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNE 185 L+F++L + +T + + +S + +VAH L+S+ ++ L I L + Sbjct: 157 LLFVSLKSYKVSSTVIETKEREPCYIVLSFLIMLVIAVVAHALASYNPNFTLEITSLKPD 216 Query: 186 NGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYS 245 N V W Y+ +I W +L + +W + ++ A+L N+ LL + YS Sbjct: 217 NVTVHWHIGYIYSLIVSWGLVLLYLIIKTRTHNILWKSIGLLCCSAILTNVLLLSLDEYS 276 Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA 305 + WY+SR IEV+S L ++ I M + F L+ + A +D +T I+NR F+ L A Sbjct: 277 MYIWYVSRGIEVISALCIISILMYNTFIILKKETDSAIKDAMTKIYNRKLFYKSLKSSLA 336 Query: 306 SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGV 365 K CVM++DID FK++NDT+GH GD+VI ++V+I+ KSIR D+ ARVGGEEF + Sbjct: 337 ---KGTVCVMVLDIDKFKRINDTYGHQEGDRVIISIVDIVNKSIRDTDIFARVGGEEFAI 393 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLA 425 LL D + A +AERIR NVE T Y + +K+TISIG ++ + + +++ A Sbjct: 394 LLKCNDKDEAIVVAERIRRNVENGTTIPNSYNLKEKMTISIGVYCSKIDDESADKVVSYA 453 Query: 426 DNALYEAKETGRNKVVVR 443 D ALYEAK +GRNKV Sbjct: 454 DAALYEAKNSGRNKVCYY 471 >UniRef50_D0YJ51 Diguanylate cyclase n=1 Tax=Klebsiella variicola At-22 RepID=D0YJ51_KLEVA Length = 452 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 167/445 (37%), Positives = 263/445 (59%), Gaps = 2/445 (0%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 ME Y +++ V + ++ L L+ N+ E +P S+YL+++IALFFI+ AF+F Sbjct: 9 MEMKY-KLNPVVSLVIVISLFLIASNTIIYMEVNEMNIPLSSYLIIVIALFFINITAFMF 67 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 +Q+ ++ +R +FS VLSL F CL+YF T+IIIQ+ + + L + ND AI+YLFRQ Sbjct: 68 LQMDYMSNRIEFSKFVLSLTFFGCLVYFAETIIIIQKPVNDALELQIKANDTAIFYLFRQ 127 Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 MS IL+ LA+ + E ++ N K + LF F PIVAH LSSH +Y + Sbjct: 128 MSFIILLILAIYSYKLEQSQTLNGCKKIKIMVYCLFPTFIMPIVAHNLSSHNATYTFMLT 187 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 + + + +W Y+ +I +W + L DIWNG+ VI A++YN LL Sbjct: 188 NYLSGDKKAIWNIQYINALIILWSLTSYFIVKVTKLSSDIWNGMLVICLSAIMYNTFLLL 247 Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 + +Y++S WY+SR IEV+SKL V+ M +F L++ ++A RDP+TNI NR +FF L Sbjct: 248 LDKYNLSIWYLSRAIEVLSKLFVIGTLMNCVFVKLKIANHLAIRDPMTNIHNRRFFFTRL 307 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 + + CVM++D+D FK +NDTWGHP GD + VV+IIG+ I P+D+ AR+GG Sbjct: 308 E-EMLKSTCQNICVMVIDLDDFKSINDTWGHPTGDSTLLAVVDIIGQYIGPNDIFARIGG 366 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEFG+++ + A + +R NV+ T +Y IP+ +T+S+G + + + Sbjct: 367 EEFGIIVKKSSLKDAIEFSNMLRNNVKIGTARGNKYNIPRTITLSVGGTLLTSGTYSVGD 426 Query: 421 IYRLADNALYEAKETGRNKVVVRDV 445 + + ADNALY K G++ ++ ++ Sbjct: 427 VIKSADNALYSVKNNGKDGIMFAEM 451 >UniRef50_UPI0001C3436F predicted diguanylate cyclase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C3436F Length = 443 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 148/443 (33%), Positives = 242/443 (54%), Gaps = 7/443 (1%) Query: 3 KDYLRISSTVLVSLL-FGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFM 61 + ++ + + L+ + L + + + + VP++ YL++++ LFF+ + F+FM Sbjct: 6 TNNRKLMAFYITCLVSYILGGLCLTQF---KLTIQSVPQTIYLIIIVGLFFLYGIIFLFM 62 Query: 62 QLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQM 121 ++ + +L +AFLS I+FV T+ I+Q +I + + NDIAI+Y FRQ+ Sbjct: 63 LFQYLCRKDLTCLMILGMAFLSNNIFFVETIYIVQDLINDHTSIEKRTNDIAIFYYFRQL 122 Query: 122 SLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAE 181 S L+F+ L + + +T + + ++ F + ++AH L+S+ L I Sbjct: 123 SFIALLFVCLKSYKTSSTIIETKEREPCYIAVAFFIMLAIAVLAHSLASYNPGMTLEITS 182 Query: 182 LTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFM 241 L +N V W Y+ +I W +L + +W + ++ +L N+ LL + Sbjct: 183 LKPDNVTVHWHIGYIYSLIVAWGLVLLYLVIKTKTHNILWKSIGLLCCSGILTNVLLLSL 242 Query: 242 SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT 301 YS+ WYISR IEV+S L ++ I M + F L+ + A +D +T I+NR F+ L Sbjct: 243 DEYSMYIWYISRGIEVISTLCIISILMYNTFIILKKETDSAIKDAMTKIYNRKLFYRTL- 301 Query: 302 VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGE 361 AS K CVM++DID FK++NDT+GH GD+VI ++V+II SIR D+ AR+GGE Sbjct: 302 --KASLTKGAVCVMVLDIDKFKRINDTYGHQEGDRVIISIVDIINNSIRDTDIFARIGGE 359 Query: 362 EFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEI 421 EF +LL D + A +AERIR NVE T Y + +K+TISIG + + +++ Sbjct: 360 EFAILLKCKDKDEAIVVAERIRRNVENGTTLPNAYDLKEKMTISIGVYCSNATDESADKV 419 Query: 422 YRLADNALYEAKETGRNKVVVRD 444 AD ALY+AK +GRNKV Sbjct: 420 VSYADAALYDAKNSGRNKVCYYS 442 >UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 Tax=Klebsiella RepID=B5XWN5_KLEP3 Length = 453 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 115/441 (26%), Positives = 213/441 (48%), Gaps = 17/441 (3%) Query: 11 TVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRR 70 V + LL G + V ++F+ L + +F I FM + + ++R Sbjct: 15 YVFICLLAGFGIAGVTAFFHTSFSTTSSILFPLLTSFLMVFHI--TIACFMGMKYWSNKR 72 Query: 71 QFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLA 130 + ++ F + + T+ + T + QND IYY FR + + +L + Sbjct: 73 RLYLTPVAFGFACSALLMLGTLSSYPDWLTCSTTPVINQNDAVIYYFFRNIMMAVLFMSS 132 Query: 131 LVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVV 190 +V +L + +T + F ++ + SSH +++ + + + Sbjct: 133 IVLYYFRQRIMHSLKAHIITFAACIVFTLTIIFLSWVYSSHSPWLSVNFIDDLSHTFTPL 192 Query: 191 WKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVS-TW 249 W++ +++ +W L + + + LR W A LY + L + + TW Sbjct: 193 WQSIIGWLLMAIWFITLILLISLSKLRNIFWFSGAFFC-SAYLYTLFQLVSTAGDLDQTW 251 Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNI-------AHRDPLTNIFNRNYFFNELTV 302 Y +R E + L ++++ + +F R + + + RDPLT ++NR++F++ L Sbjct: 252 YQARFFETLCTLFLILVLLIDVFMLYRESNHKYVHSYQNSIRDPLTRLYNRSFFYDTLNQ 311 Query: 303 QSASAQ-KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGE 361 Q A + P V+I D+DHFK++ND +GH GD+VI+ +++ R DD AR+GGE Sbjct: 312 QLAKVNPQHPLSVIISDLDHFKRINDNYGHVAGDKVIQFAASVLENHSRVDDAAARIGGE 371 Query: 362 EFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEI 421 EF +LL + + A A+AERIR V + ++ +P+++TIS+G T++ +++ Sbjct: 372 EFALLLVNTAEKDALAIAERIRLAV-----NAEQHPLPERMTISMGLYTTRDRSVSAETC 426 Query: 422 YRLADNALYEAKETGRNKVVV 442 AD A+YEAK +GRN+VVV Sbjct: 427 VERADAAMYEAKNSGRNRVVV 447 >UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9V5_ENT38 Length = 473 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 119/424 (28%), Positives = 197/424 (46%), Gaps = 12/424 (2%) Query: 31 QPGVEEVVPR-STYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFV 89 P L +A+F + FM + + D+++ + ++ AF + + Sbjct: 34 LNFAPAFSPLLFPLLTSFLAVFHL--FIACFMVMKYWCDKKRIYHLAIAFAFTGSTVLLL 91 Query: 90 ITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKM 149 T+ + + V + I+++ R + + +L LA V + ++ L + Sbjct: 92 ATLTCFPVWLMQPGMPHVNYSGAMIFFMMRNVMMAVLFTLAGVLFIFRHSPLTRLMRH-L 150 Query: 150 TLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSV 209 L F VA S H E + L + T +WK +I +WL L+ Sbjct: 151 IFAGLLVFTLTMVTVAWFYSGHSELFPLDLINNTTRQFTALWKQIINGALIILWLIALTT 210 Query: 210 NLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMC 269 L LR W T + C V+ I+LL S WY +R E + L +++ + Sbjct: 211 LLIITRLRNLFWASGTFLCTCYVIILITLLPADFIGGSVWYSARLFETTASLLIILTLLH 270 Query: 270 HIFSALRVTK-------NIAHRDPLTNIFNRNYFFNELTVQSAS-AQKTPYCVMIMDIDH 321 +FS R + + RD LT ++NR+YF+ L P V++ D+D+ Sbjct: 271 DVFSLYRNSHIKYQQSYQNSIRDALTRLYNRSYFYESLNQALGKITDSHPVSVIVCDLDY 330 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK++ND +GH GD+V++ V N++ S+RP D+ AR+GGEEF +LL++ +E A+ +AER Sbjct: 331 FKRINDNYGHLQGDKVLQFVANLLMDSVRPQDITARIGGEEFVLLLSNTHSEAARLVAER 390 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IR ++ E +P+ VTIS+G + E AD A+YEAKETGRN+VV Sbjct: 391 IRLSLSSFDRITTEGMLPESVTISMGIYTATTLPVTAEECVERADKAMYEAKETGRNRVV 450 Query: 442 VRDV 445 V Sbjct: 451 VYQE 454 >UniRef50_UPI0001C34201 diguanylate cyclase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C34201 Length = 402 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 113/404 (27%), Positives = 201/404 (49%), Gaps = 10/404 (2%) Query: 49 ALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVV 108 L F +V FM + + D+R+ ++LAF + + T+ + S++ Sbjct: 1 MLVF-HSVIACFMVMKYWCDKRRLYLVAIALAFTGSALLMIGTLTSFPAWLNLYQFSTIN 59 Query: 109 QNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHIL 168 ND IYY+FR + + +L ++ + V + + + + LF V +A Sbjct: 60 YNDAMIYYMFRHILMAVLFIVSALLYVVRDVPLSRMTHTSLFFGMLLFTVVIIA-LAWFY 118 Query: 169 SSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIA 228 SSH ++L + + + +W I+I +W+ + +R W ++ Sbjct: 119 SSHSSLFSLDLIDNETRHFMAIWNRVINIILIVLWVATFVTLMIITRIRNMFWVSGNFLS 178 Query: 229 FCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTK-------NI 281 C + + +L + +WY +R E ++ L ++ + + +F+ R + Sbjct: 179 LCYIGTLLMMLIAGQAEDISWYRARLFETIATLLIIFVLLYDVFNLYRESHLKYQQSYQN 238 Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKT-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 + RDPLT ++NR+YF++ L SA +T P V++ D+D FK++ND +GH GD+V+K Sbjct: 239 SIRDPLTRLYNRSYFYDALNHSLRSASRTQPVSVVVSDLDRFKRINDCYGHLQGDKVLKF 298 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 V ++ S+RPDD+ AR+GGEEF ++L + + A+ +AERIRE + ++ E +P+ Sbjct: 299 VARLLMDSVRPDDIAARIGGEEFVLMLANTPPDTARQVAERIREKLSSFDKNSSEEQLPE 358 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +TIS+G AD A+YEAKETGRN+VVV Sbjct: 359 PITISMGVFTATSAETTAETCVECADKAMYEAKETGRNRVVVYS 402 >UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Escherichia coli RepID=A7ZJI1_ECO24 Length = 443 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 150/441 (34%), Positives = 239/441 (54%), Gaps = 8/441 (1%) Query: 5 YLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLY 64 ++I + + L+ N+ ++ +Y + +I LFFI+ + FIF+ LY Sbjct: 9 KIKIFIFLFSCISIIFLLLHENNGIYITQTTQI----SYSVFIIGLFFINLMIFIFLLLY 64 Query: 65 FIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERL-TSSVVQNDIAIYYLFRQMSL 123 ++ ++RQ +LS AFLS Y + II + L T NDIAIYYLFRQ S Sbjct: 65 YVSNQRQSYLLILSFAFLSNTYYLLEVAIISLSPLGNDLSTIYQKSNDIAIYYLFRQFSF 124 Query: 124 CILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELT 183 +IFLA+ + +N + + +S+ +F P VA LSS Y+L+I + + Sbjct: 125 ISIIFLAVYSTNVKNKSVLEDKRNIIIVVLSILILFITPYVAKNLSSDNIKYSLNIIQYS 184 Query: 184 NENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSR 243 W Y I+ WL LL + IW + +I+ +V N+ LL+ Sbjct: 185 LNRHLPTWNIVYTKIISVFWLVLLISSCISIRNYSKIWLCIILISIVSVCNNLILLYFID 244 Query: 244 YSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ 303 S WY+++ +E++S + ++ M ++F L ++A DPLTN +NR YF + L Sbjct: 245 KSHPAWYMTKFLELISMIYIISTLMYYVFRKLNHANHMAIHDPLTNTYNRRYFIDSL--- 301 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 ++ + V+++DID FK +ND WGH +GDQVI V II KSIR +D+L R+GGEEF Sbjct: 302 KNISKHHDFSVIMLDIDSFKSINDKWGHHMGDQVIVMVTRIIKKSIRKEDILGRLGGEEF 361 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 G+++ + ++AERIR+N+E + P+K+T+SIG ++EN L+P+E+ Sbjct: 362 GIIIKGNTQKLLLSIAERIRKNIEEQCSEKLLSHGPEKITVSIGCFTSKENNLSPSEMLV 421 Query: 424 LADNALYEAKETGRNKVVVRD 444 AD ALY+AK TG+NKV++ Sbjct: 422 NADKALYQAKRTGKNKVIIHS 442 >UniRef50_C1M4A3 Diguanylate cyclase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4A3_9ENTR Length = 449 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 18/427 (4%) Query: 28 WFNQPGVEEVVPRSTYLMV--MIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCL 85 + P + S Y ++ + I T F+ M ++ RR+ L+ AF Sbjct: 27 LWYIPFSNQRYSLSFYPVIATFAGVLHIQTGCFMTMN--YMSYRRKKYLLPLACAFYFSG 84 Query: 86 IYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLF 145 ++ + + I + V+ NDIA+ Y R M + L F +N K+++ Sbjct: 85 VFLFLALYI---YFYKNGLPGVIYNDIAVLYFMRNMLITGLFFATYYLYTFKNKKEKH-- 139 Query: 146 SKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLT 205 K + + + ++A + S + + + W+ S++ ++I +W Sbjct: 140 -GKTVIYATYLWCMLHLVMAILYSIRITPISFQLVDTETFEWLRPWRGSFIYVLIILWTC 198 Query: 206 LLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 ++ + L+ W ++++A +L I +L + + WY++R +E +S + VM+ Sbjct: 199 IVLLGAKLTRLKTQFWVSMSLVALSNLLSVIIMLKYTHIDSAGWYLARGLECLSAMAVMI 258 Query: 266 IFMCHIFSALRVTKNI-------AHRDPLTNIFNRNYFFNELTVQSA-SAQKTPYCVMIM 317 + M IF + ++ + RDP+T +FNR YF+N L+ + +A P ++ Sbjct: 259 VLMSDIFKRYKASRQAYELSYENSVRDPMTRLFNRGYFYNALSNEIKMTAPHKPLSIVFC 318 Query: 318 DIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKA 377 DID FK VNDTWGH GD+VI + I+ + R +D++AR+GGEEF +LL + + + A Sbjct: 319 DIDFFKSVNDTWGHLQGDRVIIKLSEIMQRLSRRNDIVARIGGEEFAILLPETNADAAFD 378 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGR 437 +AERIR++VE+ T + P+ +TIS+G V + +N P ++ AD ALY AK GR Sbjct: 379 IAERIRKHVEQQTQATTKGDFPRIITISLGIVTSVDNRSAPEQLADCADRALYMAKNRGR 438 Query: 438 NKVVVRD 444 N VV Sbjct: 439 NCVVAYS 445 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 118/472 (25%), Positives = 216/472 (45%), Gaps = 57/472 (12%) Query: 9 SSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVM-IALFFIDTVAFIFMQLYFIY 67 + V+V+LL + ++++ + + P + ++ P +L V A+ ++++ + F Sbjct: 15 HAAVIVALLLLTSALVISPFISIP-LPDIAP---FLPVYGTAVVLLESITAYLLLSQFAS 70 Query: 68 DRRQFSNCVLSLAFLSCLIYFVITVIIIQQII------EERLTSSVVQNDIAIYYLFRQM 121 +R+ F+ V S F+I ++ +Q ++ + L ++ Q+ + I+ +F Sbjct: 71 NRQVFAGFVAS------AYLFLIPLVTVQLLVFPGVFAPKGLLNAGSQSAVWIW-VFWHA 123 Query: 122 SLCILIFLALVNKVSENTKQRNLFSKK------------MTLCISLFFVFGGPIVAHILS 169 S LI LAL+ + T+Q K +L ++LF +G + +++ Sbjct: 124 SFPTLILLALMAQQKLTTQQVAPMQLKYWLWGFVLIPVLCSLALALFATWGSHWLPILIA 183 Query: 170 SHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAF 229 + LH + +VW + + ++ M S N+ + W V ++A Sbjct: 184 KNSYKQLLH-----SPYALLVWGLNAL-ALVCMIRRARSNNVLYT------WLSVALLA- 230 Query: 230 CAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHI-------FSALRVTKNIA 282 + ++L +R+S+ WY +R VS + ++ + + A + Sbjct: 231 SLIDVTLTLFAGARFSLG-WYAARISSSVSSMVLLCALLWEVNRLYVATQRANESLYQQS 289 Query: 283 HRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 +D LT +FNR Y ++L + A K P C++++D+DHFK ND GH GD + T Sbjct: 290 VKDTLTGLFNRRYLESQLAIHIDHAKRHKEPLCLLVLDVDHFKAFNDQHGHLAGDDCLVT 349 Query: 341 VVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V + +S+ RP D +AR GGEEF V+L D + +AER+R NV + + Sbjct: 350 VAKQLEQSLYRPADFIARYGGEEFIVVLPHTDAKDGMQIAERLRLNVSAEKIEYQGQLL- 408 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV-VVRDVVNFCE 450 VTISIG V + + + AD+ALY+AK GRN V V D + Sbjct: 409 -SVTISIGCAVLRHSEETAQSLLIAADSALYQAKAAGRNCVKVAVDEPDITH 459 >UniRef50_D0ZCJ5 Diguanylate cyclase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZCJ5_EDWTE Length = 456 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 22/434 (5%) Query: 23 VLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFL 82 V F V+ R + L + +F+ + F +R+Q L +++L Sbjct: 25 VCYCLIFLTAAQPMVLLRGFIAVCNAILLIMHIFIALFIFMQFNCERQQIYKIPLIVSYL 84 Query: 83 SCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQR 142 + +++ Q I +++ ND ++YL R + +L AL +++ Sbjct: 85 LSASLLLCSLLFCQDIFFPEYKNALTLNDFVLFYLIRYSGMAMLFLYALYLY---RRQEK 141 Query: 143 NLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNE------NGQVVWKASYV 196 + + +SL + A +LS+H +LH L N Q ++ + Sbjct: 142 GAIALGPVVALSLTMSVAVALGALLLSNH----SLHSLWLEPRLLQVSQNYQAGYRQVVL 197 Query: 197 TIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIE 256 M +W L + ++ L W VT+ + + + + S WY S Sbjct: 198 PFMCTLWGALALLLIWQTRLATRFWLAVTLASLIILGGFVLQWRSPQVSSVGWYGSLLFG 257 Query: 257 VVSKLTVMVIFMCHIFSALRVTK-------NIAHRDPLTNIFNRNYFFNELTVQSASAQK 309 +V+ VM IF+ IF R + N A RD LT FNR Y++ L Sbjct: 258 LVANFYVMEIFLYDIFQRYRRIQIEYAISYNNAIRDGLTQTFNRAYYYGCLQRALPQCGA 317 Query: 310 T-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 T P V++MDID FK +ND +GH GD+V+ V IG+ RP+D++ARVGG+EF +LL Sbjct: 318 TYPLGVLMMDIDRFKLINDRYGHLSGDRVLCEVARAIGRGARPEDVVARVGGDEFCILLY 377 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D + +A+AERI +V L + P VT+SIG VV +E+ + AD A Sbjct: 378 HADAAQTRAIAERICRDVAALPLTALD-GTPLSVTLSIGGVVCEESRQSAQACVAQADMA 436 Query: 429 LYEAKETGRNKVVV 442 LY+AK GRN+VV+ Sbjct: 437 LYQAKLAGRNRVVM 450 >UniRef50_B1LBA3 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=9 Tax=Thermotogaceae RepID=B1LBA3_THESQ Length = 1203 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 105/415 (25%), Positives = 188/415 (45%), Gaps = 49/415 (11%) Query: 51 FFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQN 110 FF + +A++F + D F + +L L + +T+ ++ + + S++ +N Sbjct: 816 FFNEEIAYVFTERLAKLDPEGFEDFLLELERENVENSSNLTLALVYETFYK-FYSALGEN 874 Query: 111 DIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFG-------GPI 163 A YL + + + LI L V+ E ++ + KK + L F+ Sbjct: 875 FKAKRYLRKAIFVYNLIGLREVSVKLEVEEKTQIEEKKAPFYLLLGFIETEKEFSDMMEF 934 Query: 164 VAHILSS--HYESYNLHIAELTNENGQVVWKASYVT-------IMIFMWLTLLSVNLYFN 214 VA LS YE +++ I E T + + S +T + I + T++S +L Sbjct: 935 VAARLSEVIPYEVFSIRIIERTTKKVMEEYSTSPITPPMEKDFLEISPFRTVMSFHL--- 991 Query: 215 GLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSA 274 +++D+ GV C + W + T+E + ++ Sbjct: 992 DMKHDMIVGVETNLECD-------------EKTAWELVETLEQFGNILTTIL-------R 1031 Query: 275 LRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 R+ ++ + +DPLT + +R YF L + +S K+P +++ D D FKK+ND +GH Sbjct: 1032 ERLYRDRSMKDPLTGVLSRWYFMERLEEEAYKSSRYKSPLSIIMCDADDFKKINDQFGHV 1091 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD 392 GD+ + + + +R DL+ R GGEEF + L E AK +AE++R+ V + Sbjct: 1092 AGDKTLGWLGRKMKSVLRKSDLVGRYGGEEFIIALPGTSLEEAKIVAEKLRKAV----ME 1147 Query: 393 NPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 +PE +T+S G +N +P E + AD ALY AK G+N VV V++ Sbjct: 1148 DPENT--YHITLSFGVAEY-KNGEDPFETIKRADEALYLAKTLGKNSVVTEKVLS 1199 >UniRef50_B5JWA7 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWA7_9GAMM Length = 394 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 96/390 (24%), Positives = 169/390 (43%), Gaps = 51/390 (13%) Query: 75 CVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNK 134 +L L + F I+++++ + L S V A+ L+ L +L F+A+ K Sbjct: 31 ILLGSLVLLAPLLFAISILVVLWVAPSFLNSQVAY---ALTTLYAAHVLVMLGFIAVALK 87 Query: 135 VSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKAS 194 + +F F V G A ++ S Y + + S Sbjct: 88 KRHKQEDWPMFEN--------FIV--GSFTAVVMLSGYATGS---------------HFS 122 Query: 195 YVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAV------LYNISLLFMSRYSVST 248 +++F+ + + S + +R+ W VT + + L + LL S Y Sbjct: 123 EGLLLLFLGVNITSALAHVKKIRFLFWCVVTALVCLGINDLFGWLEHAPLLERSLYQPDG 182 Query: 249 -----WYISRTIEVV---SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 W++ + + + + + + ++ + + + ++ D LT + NR+ F Sbjct: 183 TPHILWWVVQAVMALILSALIYLCLLAVGRWVERENLYREMSTIDGLTRLTNRSSFIKRG 242 Query: 301 TVQSASAQKTP------YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDL 354 + A Q+ P +++D+DHFK +NDTWGH GD+V+ I+ + R D Sbjct: 243 DEELARLQRLPSDPSPTLACIMLDLDHFKSINDTWGHHAGDEVLVVASKIMMDNARQYDE 302 Query: 355 LARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN 414 + R GGEEF +LL +D A+ +AER+R+ + AI + T S+G Sbjct: 303 VGRYGGEEFAILLPSVDLALAEKIAERLRKKISEAVVKVDGKAI--QFTASLGVASFPSE 360 Query: 415 AL-NPNEIYRLADNALYEAKETGRNKVVVR 443 L N N++ + AD ALYEAKE GRN+VV Sbjct: 361 GLENMNDLLKAADAALYEAKEGGRNQVVTA 390 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 8/233 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 V +IA L ++L F + ++ + ++ + + + + LR Sbjct: 328 LCVPLIAQGDTLGVVTLHFETGEALE--LARPLAQRFAERVALSLVNLRLRATLR---QQ 382 Query: 282 AHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RDPLT ++NR Y T + A ++ P ++++D+DHFK+ NDT+GH +GD +++ Sbjct: 383 SIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYGHALGDTLLR 442 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + + + R +D++ R GGEEF VLL + D +A+A AE +R +VE L + + Sbjct: 443 RLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTSNDAEFV 502 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 +TISIG ++A P ++ AD ALY AK GRN+V + P Sbjct: 503 A-LTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVEFEPIPGAAGLP 554 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 6/212 (2%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 + L + T R + V++ + I + +LR + RDPLT ++NR Sbjct: 422 GLLHLEAGSAAPLTRRQERLAQTVAETAALAIVNLRLRESLR---QQSIRDPLTGLYNRR 478 Query: 295 YFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 Y + AQ++ P V+++DIDHFK ND+ GH GD++++ + ++ IR + Sbjct: 479 YLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHGHEAGDELLRALGQLLSGCIRAE 538 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 D+ R GGEEF ++ + ++A A+++R VE + A+ ++V++S+G Sbjct: 539 DVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQFASRGEAL-EQVSVSLGVAAFP 597 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 ++ + ++ R AD ALY AK GRN+V+ D Sbjct: 598 QHGRHLADLIRAADAALYRAKREGRNRVITAD 629 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 95/390 (24%), Positives = 165/390 (42%), Gaps = 35/390 (8%) Query: 77 LSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF---RQMSLCILIFLALVN 133 L+L FL + + + +V +A++ +F ++ + F+AL+ Sbjct: 87 LALGFLGFTV----------IYLPHGFLTRIVDEGLALFLIFGPASRLVMAACFFIALLR 136 Query: 134 KVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHI------------LSSHYESYNLHIAE 181 + + L F+ I A++ + + L +A Sbjct: 137 YRALPDVLPVRCRYQFWLAGLGVFMLIMGIAAYLGQLPWAQARPVLVGLETGAMLLSLAG 196 Query: 182 LTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD-IW---NGVTVIAFCAVLYNIS 237 + M+ + + + + ++ +W +G+ F + Y I Sbjct: 197 ILVMAVLRTRSPLMTVYMVSLAVFAQASLAFLLATPWNHLWWLGHGIFAAGFFMLSYGIV 256 Query: 238 LLFMSRYSVSTWY--ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 F + S ST Y + ++ + + + A R + +A D LT + NR Sbjct: 257 QAFHTTRSFSTVYSQMDMMAQLREQQAWTQEALLQVQEANRKLEQLASTDALTGVANRRQ 316 Query: 296 FFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 ++ + P ++ +D+DHFK++ND +GH GD+V+K V I +S+RP D Sbjct: 317 LVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPSD 376 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 LLARVGGEEF VLL D D A+ +AERIR +E L D P + VT+S+G Sbjct: 377 LLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGL--DIPVQGVVLHVTVSVGCAQLGP 434 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVR 443 + + + AD LY+AK GRN+VV+ Sbjct: 435 DGADMKSLTHTADERLYQAKALGRNRVVIA 464 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 96/174 (55%), Gaps = 2/174 (1%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWG 330 R + A DPLT I+NR +F + Q + P ++++D+DHFK+ NDT G Sbjct: 147 ERQRKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHG 206 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+ + + + I +RP D+ AR GGEEF V+L D D + +AER+R VE L Sbjct: 207 HQGGDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALE 266 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 + E +TIS+G T + +E+ AD ALY+AK GRN+VVV D Sbjct: 267 IKDDEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVVGD 320 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 6/190 (3%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--P 311 T + VS + I ++ +R ++ DPLT +FN F+N L + + Q+T P Sbjct: 204 TFQTVSYQLGLAIDNARLYETVR---RLSIYDPLTGLFNHGQFYNLLAEELSRHQRTGRP 260 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++++DIDHFKKVNDT+GH GD V++ + ++ K R D + R GGEE ++L + D Sbjct: 261 LSLLMLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALILPETD 320 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 E A+ AER+R +VE+ VT+SIGA + A++ + AD ALY Sbjct: 321 REAARQTAERLRRHVEKCCFATCGQQ-EIGVTVSIGAATCPDAAISAETLVNAADRALYA 379 Query: 432 AKETGRNKVV 441 AK GRN+V Sbjct: 380 AKRAGRNRVC 389 >UniRef50_C0QSJ8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Persephonella marina EX-H1 RepID=C0QSJ8_PERMH Length = 621 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 173/381 (45%), Gaps = 35/381 (9%) Query: 75 CVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNK 134 ++SLA S + + T+ I+Q+ IE R+ V+N + Y R++ + Sbjct: 16 LLISLAVYSYIYF---TLPILQRKIENRIIKYSVEN---VIYSVRRLIKENTDHDGFIES 69 Query: 135 VSENTKQRNLFSKKMTLCIS-----LFFVFGGPIVAHIL----SSHYESYNLHIAELTNE 185 + ++ R +K+ L I+ +F V+ + S+ + +N L E Sbjct: 70 MLKDASFRKKIREKLQLFITDKLKHIFIVYKDDNGKYRYIVDVSTEEDVFNFLFIPLKEE 129 Query: 186 NG--QVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSR 243 V+K +I + + + + ++ G +I F +L + Sbjct: 130 KNILDFVYKNKKPQYVIHKDINTIGITYFEPVIKEGKVTGTVIIDFS----LKALKEIED 185 Query: 244 YSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ 303 S + + +T+ IF I S + K A+ D LT +FNRNY V Sbjct: 186 LVGSIKAGVLGLATFTVITLFFIFYYFIKSFI--LKQRAYTDSLTGVFNRNYLEEITDVI 243 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 Y VM++DIDHFK++NDT+GH +GD+V+ +I +++R DD++ R GGEEF Sbjct: 244 DLK----DYIVMLVDIDHFKRINDTYGHEIGDRVLSKFAELIKQNLRRDDIIIRYGGEEF 299 Query: 364 GVLLTDIDTE--RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEI 421 VLL + + + +AER+ + +E ++T+SIG + + + N + Sbjct: 300 LVLLKNYRKQKKDSLKVAERLMDTIENTEFS------GIRITVSIGINMDTDKSRNLTDA 353 Query: 422 YRLADNALYEAKETGRNKVVV 442 + AD ALY+AK GRN++ + Sbjct: 354 IKKADTALYKAKREGRNRIEI 374 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQSASAQKTPYCVM 315 + L + + C + + +A RD LT NR +F + L + A + ++ Sbjct: 168 IEDLALSLGAFCDTSRHMAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALL 227 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 +DIDHFK++NDTWGH GD+ +K N S+R D+L R+GGEEF V L + + A Sbjct: 228 ALDIDHFKRINDTWGHAAGDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGA 287 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 + +AER+R VE L P +T+SIG +E L + AD ALY AK + Sbjct: 288 RVIAERLRAAVEELVVR-PAKGELFDLTVSIGIAQLREGDLTVETMLERADQALYRAKNS 346 Query: 436 GRNKVVVRD 444 GRN+V+ + Sbjct: 347 GRNRVMAEE 355 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMI 316 V+ LT + I + A + ++++ D LT ++NR ++ L + + + +++ Sbjct: 130 VIYDLTDVAINSLALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS-RHGSSIALLM 188 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 +DIDHFK +ND GH GD VIK V +I + +R D+ R GGEEF +LL D A+ Sbjct: 189 LDIDHFKSINDRHGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHTDLAGAR 248 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 LAER+R++VE + AI TIS+G A + + AD ALY +K G Sbjct: 249 TLAERLRQSVEEQEVIHNGQAIA--FTISLGIACLDRPARDHRCLIEWADQALYASKRAG 306 Query: 437 RNKVVVR 443 RN+V Sbjct: 307 RNRVSTY 313 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 6/207 (2%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + ++ +S +++ +EVV++ M + H+ LR + RDPLT ++NR Y Sbjct: 375 LGMIHLSSPNLAVLERLNLVEVVAEQLAMALHNLHLRHRLRT---QSIRDPLTGLYNRRY 431 Query: 296 FFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 L + + + P +M++D+DHFK +ND +GH GD ++ ++G +RP+D Sbjct: 432 LEESLLRELSRCARRDLPLALMMLDLDHFKALNDRFGHAGGDALLAAFGQLLGGLVRPED 491 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 + R GGEEF V+L + A+ AE+IR VE++ + +P +T+SIG E Sbjct: 492 IACRYGGEEFTVILPGAAADVAQRRAEQIRAAVEQMQVQHHGQMLP-SITVSIGVAAYPE 550 Query: 414 NALNPNEIYRLADNALYEAKETGRNKV 440 + E+ R AD ALY K +GRN+V Sbjct: 551 HGSTGEELLRCADAALYCGKRSGRNRV 577 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 4/168 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVG 334 +A D LT +FNR F + ++ +++MDIDHFK+VNDT GH VG Sbjct: 885 RLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDIDHFKRVNDTHGHGVG 944 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D+V++ + I ++R D+L R+GGEEFGVLL + D A +A+R+R +E+ + Sbjct: 945 DEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVAQRLRRAIEKASMATD 1004 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + ++T+SIGA + +A + + AD ALYEAK++GRNKVV Sbjct: 1005 AGTL--RITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNKVVA 1050 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 7/193 (3%) Query: 252 SRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQK 309 S E +L + + + AL + +A RD LT ++NR Y L + A + Sbjct: 448 SALRETNRQLHARIEEIGRLQVAL---QELAVRDSLTGLYNRRYLDETLEREVSRARREG 504 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 P ++++DIDHFK+VNDT+GH VGD+V++ + + + IR +D+ R GGEEF +LL + Sbjct: 505 IPLSLVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPN 564 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNAL 429 + E A+ R VE L+ + + I TIS+G E+ P+++ R AD AL Sbjct: 565 MPLETTMLRAQGWRSAVEALSVKHGNFQI--TFTISLGVAAYPEHGKTPDDLTRCADQAL 622 Query: 430 YEAKETGRNKVVV 442 Y AK GRN+V V Sbjct: 623 YRAKNEGRNQVSV 635 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 6/183 (3%) Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTW 329 A + +A D LT + NR F L VQ TP ++ +D+D FK+VNDTW Sbjct: 540 REAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTW 599 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GH VGD+V++ + I +R D + R+GGEEF VLL D E A A+AER+R VE Sbjct: 600 GHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAA 659 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV-VRDVVNF 448 A P VT+S+G + + + R AD ALY AK GRN+V D+ Sbjct: 660 PLLT--TAGPLTVTLSLGVSASPP-CDGADTLLREADRALYRAKAGGRNRVERAFDLAGA 716 Query: 449 CES 451 C + Sbjct: 717 CAT 719 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 6/186 (3%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVND 327 + LR + +A D LT + NR +F L ++A AQ+ P V+++D DHFK +ND Sbjct: 500 QVEDTLR-LEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSIND 558 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 TWGH GD V++ + +++G S+R +DL+ R+GGEEFGVLL + ERA AERIR VE Sbjct: 559 TWGHEAGDMVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAVE 618 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 + + T+S+GA + + +++ R AD+ L AKE GRN+V + Sbjct: 619 DAPVAVRDVWVG--CTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRVCAQQARP 676 Query: 448 FC-ESP 452 C ESP Sbjct: 677 ACAESP 682 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 4/195 (2%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTP 311 ++ +++ +T + R + +A D LT + NR +L + ++ P Sbjct: 155 SVGILTDITRRKKMEAKLRELNRKLERLATLDGLTRVANRRSLDRFLDLEWRRTRRERAP 214 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDI 370 +++ DIDHFK NDT+GH GD ++ V I + RP DL+AR GGEEF V+L + Sbjct: 215 MALILSDIDHFKLYNDTYGHLAGDDCLRAVATAIKECAKRPMDLVARYGGEEFAVVLPNT 274 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNAL 429 + + A +AE I VE L +PE + + +T+S G P + AD AL Sbjct: 275 NADGAVHIAETICREVENLRVRHPESSTGEFLTLSCGVAAMVPREESTPEALVAAADEAL 334 Query: 430 YEAKETGRNKVVVRD 444 YEAK+ GRN+VV++D Sbjct: 335 YEAKKQGRNRVVLKD 349 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 7/184 (3%) Query: 264 MVIFMCHIFSALR---VTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMD 318 ++ M I R + +A D LT IFNR +F + V A P +++D Sbjct: 396 VIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALMLD 455 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 IDHFK++NDT GHPVGD IK + ++ + IR +D+L R+GGEEF ++LT+ D + A + Sbjct: 456 IDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGALLV 515 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 AER+R+ V + + T SIG E + I AD ALY AK +GRN Sbjct: 516 AERLRQAVAAIRIPAELGTVA--FTTSIGVAERLEGDATIDTILSRADMALYSAKRSGRN 573 Query: 439 KVVV 442 KV V Sbjct: 574 KVAV 577 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 11/199 (5%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNI------AHRDPLTNIFNRNYFFNELTVQSASA 307 ++ V K + + + + SALR + + A DPLT ++NR +FF + + Sbjct: 99 AVDYVIKPYSLSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERV 158 Query: 308 QK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGV 365 Q+ T +I+DIDHFKKVND +GH VGD V++ + + ++ R DL R GGEEF + Sbjct: 159 QRNETDASFIILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVI 218 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLA 425 L D DTE A +AER R+ VE L+ + + P VTIS+G EN ++ + A Sbjct: 219 CLPDTDTEGALLVAERTRKKVEELSFNTEKG--PLHVTISLGVSSANENT-TLEDMLKRA 275 Query: 426 DNALYEAKETGRNKVVVRD 444 D+ALY+AK+ GRN+ D Sbjct: 276 DDALYQAKQNGRNRTESLD 294 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 20/237 (8%) Query: 224 VTVIAFCAVLYNISLLFMSRYSVSTWYISRTI---EVVSKLTVMVIFMCHIFSALRV--- 277 +T FC L++ W ++R + ++ + + I + R+ Sbjct: 206 LTAEGFCNALHD---------GHGAWILARVAPLRDAAGQVVGAMEIIRDITDSKRLEED 256 Query: 278 TKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + + DPLT +FNR YFF + P + ++DIDHFK VND +GH VGD Sbjct: 257 LRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDIDHFKSVNDRYGHLVGD 316 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 V+ V + ++R D+LAR GGEEF +LL + D + A A ER+R V + P Sbjct: 317 TVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACASTERLRVAVAERRIETPS 376 Query: 396 YAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 P VT+S+G V + A+ + AD LY AK+ GRN+V + D+ ES Sbjct: 377 G--PVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRNRVEIWDLGRSMES 431 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 6/193 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPY 312 + + V++ + I + L + + RDPLT +FNR Y L+ + A A++ Y Sbjct: 574 QLAKTVAEQLALAIANLKLREQL---EEQSLRDPLTKLFNRRYLEQRLSQELARAKRHHY 630 Query: 313 CV--MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 V +++D+DHFK+ ND+ GH GD+++ ++ ++ +IR D+ R GGEE ++L D Sbjct: 631 SVGVLMIDVDHFKRFNDSLGHDAGDRILASIGTLLKNNIRTSDVACRYGGEEITIILPDA 690 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 E A AE +R+ + + + I VT S G ++ EI ++AD ALY Sbjct: 691 TLEEASQKAEFLRQAIAEMKIEYSG-KIVNSVTASFGVACYPDHGETGQEIIQIADKALY 749 Query: 431 EAKETGRNKVVVR 443 +AK+ GRN+V+V Sbjct: 750 DAKQAGRNRVIVA 762 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 3/207 (1%) Query: 239 LFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN 298 LF + ST +++ + V + + + RDPLT ++NR Y Sbjct: 1407 LFYLSTNNSTALPDAKLQIARTVAEQVALAIANLNLRETLQYQSIRDPLTGLYNRRYLEE 1466 Query: 299 ELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356 LT + A ++ P V+++D+D+FK+ NDT+GH VGD V++T+ ++ +++R D+ Sbjct: 1467 VLTQEIARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQTIGAMLKETVRGSDIAC 1526 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R GGEE ++L + E AE IRE + +LT + K+TIS+G ++ Sbjct: 1527 RYGGEEMTLILPESSLEETTIKAEEIREAIAQLTLAYNGQHLG-KLTISLGIAGFPKHGT 1585 Query: 417 NPNEIYRLADNALYEAKETGRNKVVVR 443 + + AD ALY AK GRN+VVV Sbjct: 1586 TGIALIQAADAALYRAKAAGRNQVVVA 1612 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 5/179 (2%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + K A RD LT I+NR+ F L ++ ++++D+DHFK+VNDT+GH Sbjct: 319 KEVKLRADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKA 378 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD V++ V I+ ++ R DL AR GGEEF VLL E A LAERIRE+++ Sbjct: 379 GDMVLRKVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRF 438 Query: 394 PEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 + VT SIG + AL +++ AD ALY+AK GRN VV+ ++ Sbjct: 439 DGHEF--SVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNGRNMVVISRPEGAAQA 495 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 106/439 (24%), Positives = 173/439 (39%), Gaps = 44/439 (10%) Query: 40 RSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQ-- 97 ++ +L +++AL + F+F+ + R Q + S + ++ Q Sbjct: 142 QTMFLGIVVALALYNL--FLFLIV-----RHQTYLWYVLTVVCSGAVQLNFNGLLFQWFW 194 Query: 98 ----IIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCI 153 I T VV L + + L + + + L + Sbjct: 195 PDVPWINRYFTVPVVSAA-----LIAAIVFTMKFLL-VKSYSRWGYRILQALLAVNLLGL 248 Query: 154 SLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWK--ASYVTIMIFMWLTLLSVNL 211 F+ + +SS ++ +A L N VW+ + W LL +L Sbjct: 249 IYGFLGSYQVGIIWISS-LAAFATPVAWLIGIN---VWRRGQILGGFYVLAWTPLLLGHL 304 Query: 212 Y-------------FNGLRYDIWNGVTVIAFCAVL-YNISLLFMSRYSVSTWYISRTIEV 257 F L V VI L Y I++ R + + Sbjct: 305 VLAVSKLGWIPRSPFTELAPQAGVAVEVILLSFALAYRINMERRRRQQAQEHALDIQRQA 364 Query: 258 VSKLTVMVIFMCH-IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCV 314 L V + A + I+ D LT++ NR F +L + A + + Sbjct: 365 NLTLESRVRERTEELEQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSL 424 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTE 373 +++DIDHFK+VND +GH VGD + + +I+ + R DL+AR GGEEF +LL D Sbjct: 425 ILLDIDHFKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVA 484 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEA 432 A+ +AER+R +V R ++ E+ P +TIS+G N + E+ R AD ALY A Sbjct: 485 GAQQVAERMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAA 544 Query: 433 KETGRNKVVVRDVVNFCES 451 K GRN+VVV + Sbjct: 545 KSDGRNRVVVWHPKAVAPT 563 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 3/167 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + +A DPLT + NR + ++ A + ++++D+DHFKKVNDT+GH VG Sbjct: 323 RLEQLAQTDPLTQLLNRRALTERITAEMERALRYDSTLALLMIDLDHFKKVNDTYGHLVG 382 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ V ++G +IR D+ AR GGEEF VLL + D A A AERIR +E Sbjct: 383 DDVLRDVGQLLGHTIRGSDITARYGGEEFLVLLPETDDAGAVAFAERIRVAMEEHPFARD 442 Query: 395 EYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKV 440 A P K+T SIG V N +++ AD ALY AK GRN+V Sbjct: 443 SMAEPLKLTASIGVAVFPAARIENVEDLFARADAALYRAKAEGRNRV 489 >UniRef50_B9Z462 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z462_9NEIS Length = 461 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 20/441 (4%) Query: 16 LLFGLALVLVNSWFNQPGVEEVVPRS---TYLMV-MIALFFIDTVAFIFMQLYFIYDRRQ 71 LL GL + + + VP + V + AL +++ + L F D + Sbjct: 15 LLAGLIATAMTAAVLMILPDIDVPTALGGNLRPVQITALTVTNSIIAYLVLLQFYADHK- 73 Query: 72 FSNCVLSLAFLSCLIYFVITVIIIQQII-EERLTSSVVQNDIAIYYLFRQMSLCILIFLA 130 SN +LS+AF + +I + + + I ++ L R LI LA Sbjct: 74 LSNGLLSVAFGYSALMSGYLLINLPGVFSTSGGFPPGSRMAIWLW-LARLGGTAFLILLA 132 Query: 131 LVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAH-ILSSHYESYNLHIAELTNENGQV 189 ++ + + + + L + + G A +LS +L I + + + Sbjct: 133 MLVLQRQQDRPLSKRVRCQALSLCVLAPLGLAWFAVAVLSRLVPDLDLLIKDNS--DYSA 190 Query: 190 VWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTW 249 + + ++ W L L LR + + + +LY I++ S W Sbjct: 191 LTHSGIGAYLLASWFVALLSVLLVTRLRSAFHCWLALSCYSYLLYLITVCSSSIRYTVGW 250 Query: 250 YISRTIEVVSK-------LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL-- 300 + SR E+ + L ++ + + R + D LT + +R +F L Sbjct: 251 HASRFFELAAAGIMLGALLFEVLKLQTRLQHSYRQAYEASIHDSLTGLSSRRHFDAVLKM 310 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 +Q + + P +++ DID FK+ ND +GH GD+ I+ + + + +R D +AR GG Sbjct: 311 ALQQQARHQAPLTLLMADIDFFKQYNDHFGHVEGDRCIQRIAACMAEQLRGGDTVARYGG 370 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPN 419 EEF +L D +A+ AER R VE L P ++ VT+S+G N Sbjct: 371 EEFVAILQYCDLVQARQAAERFRAAVESLALPTPPGSLRPVVTVSVGLYCHPANRPATAG 430 Query: 420 EIYRLADNALYEAKETGRNKV 440 + AD +LY AK GRN++ Sbjct: 431 WLVEQADRSLYAAKRAGRNRI 451 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 7/191 (3%) Query: 256 EVVSKLTVMVIFMCHIFSALR---VTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQKT 310 + V +L V+ + R T+ +A D LT + N F L A Sbjct: 563 DAVQQLLVISMHAAQSIDRARLFDQTERLATTDGLTGLTNHRTFQERLDAHLGQAQRYGK 622 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 +++ DIDHFK VNDT+GHPVGDQV++ V + ++ R D++AR GGEEF +++ + Sbjct: 623 RTSLLLCDIDHFKSVNDTYGHPVGDQVLRGVARTLARAARGTDVVARYGGEEFAIVMPET 682 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 DT A +AERIRE V +L + + P KVT+S+G ++ + AD LY Sbjct: 683 DTGGAMVIAERIREKVGQLVFETEQG--PLKVTLSLGVATFPDDGAQKPALIERADACLY 740 Query: 431 EAKETGRNKVV 441 AK GRN+ V Sbjct: 741 HAKRHGRNQSV 751 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 2/172 (1%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 R ++ A D LT + NR YFF EL + A + ++++D+DHFK ND++GH + Sbjct: 443 RELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSLLMLDVDHFKLFNDSYGHHI 502 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+V++ + + ++R DL R+GGEEF ++L + +RA +AER+R + Sbjct: 503 GDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDRAMEVAERLRLAIAGAPVLL 562 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 + + T+SIG +++ + AD+ALY AK GRN+V +D Sbjct: 563 EQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKNAGRNQVCKKDE 614 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVND 327 H+ ++ + +A D LT + NR Y + L + A ++ P +MI+DID FK +ND Sbjct: 280 HLRDNVQHSIEMAITDGLTGLHNRRYMESHLATLAEQAGSRGKPLALMILDIDFFKAIND 339 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 T+GH GD V++ I KSIR DL R GGEEF +++ + D + A+ +AER+R + Sbjct: 340 TYGHDAGDDVLREFAVRIKKSIRGIDLACRYGGEEFVIVMPETDLQVAQMVAERLRRAIA 399 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + VTISIG + ++ + AD ALY AK GRN+VV Sbjct: 400 GEPFAIEKGTKRIAVTISIGLSTLERKGEAVRDLLKRADTALYRAKHDGRNRVVAA 455 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 5/212 (2%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + LL + + + + + + + + +V K + DPLT ++NR Y Sbjct: 134 LGLLAIGCHDAAHYEPGQGTDFLERFAAIVTLCLENVLNRERLKWLGLTDPLTGLYNRRY 193 Query: 296 FFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 F L Q P +++D DHFK++NDTWGH GD V+K + + + +R D Sbjct: 194 FEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGHQAGDVVLKVLARRVRQQLRGCD 253 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 + AR+GGEEF VLL + +AERIR + + +V++S+GA + Sbjct: 254 VAARIGGEEFAVLLPSTPVRHVQLVAERIRLAIAGEPVHVSPDCV-LQVSVSLGAAMLAP 312 Query: 414 NALN--PNEIYRLADNALYEAKETGRNKVVVR 443 A + P + AD ALY+AK GRN+ ++ Sbjct: 313 GAADISPERLMARADAALYQAKRNGRNRTMLA 344 >UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W619 RepID=B1J820_PSEPW Length = 532 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 15/294 (5%) Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY 218 G P++A + + + + + +++++ + L + Y Sbjct: 247 IGVPMLAGFAPVPEAHWAV-VVQTPRDLALAPLGEMTRKVLLYILPVSIIGLLLMLWMTY 305 Query: 219 DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVT 278 + + +A A + + + WY+ EV + ++ + Sbjct: 306 RLTLPLRQLAHSASHLSATQTGEQLRRIDAWYV----EVAAIRRALLTGEQLLQEKFGKL 361 Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 + A D LT + NR +L + + + V+ +DIDHFK+VNDT+GH GD+V+ Sbjct: 362 RQQAQSDALTGLANRRAM--QLALDALMQSSRAFAVLALDIDHFKRVNDTFGHDAGDEVL 419 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K + ++ + R DDL RVGGEEF +LL D A+ +AERIR VE+ + Sbjct: 420 KHLAELLRHNSRQDDLPCRVGGEEFTMLLPDTGLADARRIAERIRSAVEQADSPH----- 474 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 K+T+SIG + + + + AD LY+AK GRN+V +V++ SP Sbjct: 475 VGKLTVSIGVACRRPDTQQAGSVLKQADEQLYKAKHNGRNRV---EVLDLSPSP 525 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 102/465 (21%), Positives = 195/465 (41%), Gaps = 26/465 (5%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIAL-FFIDTVAFI 59 ME++ ++ + L ++ + +++ ++ + + ++ +A F + +AF Sbjct: 1 MEREQIKNEAVRLFAVWYSRLIIVFLAFLPLSLILYIDYETSSKDAFVAHNFHVVAIAFA 60 Query: 60 FMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF- 118 + F+ L L+Y + II LT +N + ++ LF Sbjct: 61 TLFSAFLSYITWRCYVATGEVLLRWLVYGFLGFTIIYAP-HGFLTHHGAEN-LWVFVLFG 118 Query: 119 --RQMSLCILIFLALVNKVSENTK----QRNLFSKKMTLCISLFFVFGGPIVA------H 166 ++ L +A++ + + I V+ + Sbjct: 119 PASRLVLAFCFLIAMLKYGEMTEPGAIRNKGFIIAIIIFLIIALLVYQAAHLTQFDLNWW 178 Query: 167 ILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD--IWNG- 223 L + Y S +L + + Q + + I M LS + G +D W Sbjct: 179 RLLTEYLSISLFLGAVLWMLVQNIRGYMPLQYGIAMIWFALSCLSFSIGTVWDHQWWLAH 238 Query: 224 -VTVIAFCAVLYNISLLFMSRYSVSTWYISRTI--EVVSKLTVMVIFMCHIFSALRVTKN 280 + F + + + F++ S T Y + +++ + + + + + + Sbjct: 239 IIFASGFLLLSFGVVQAFLTTGSFKTIYSQTELFQQIIREKKKSERALIELKAVNQKLEE 298 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A D LT + NR F + + + + T C+M++D DHFK++ND +GH GD+V+ Sbjct: 299 LAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQAGDKVL 358 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K V + + +RP DLL R+GGEEF +LL + + A +AER+R+++E + I Sbjct: 359 KDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVIGSKRI 418 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 K+TISIG Q + AD LY+AK+ GRN+VVV Sbjct: 419 --KLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNRVVVE 461 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 101/201 (50%), Gaps = 7/201 (3%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYC 313 E ++L + + + L+ K + DPLT + NR F LT ++A P Sbjct: 262 ESQAQLDLTRKQLQQVQDDLKKAKEESLTDPLTQVANRRALFQSLTRETARTRRYGEPLS 321 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 ++I+D+DHFKK+NDT+GHPVGD+V+K V +R D LAR GGEEF LL + Sbjct: 322 LIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALLRDSDTLARYGGEEFVALLPETTLP 381 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL---NPNEIYRLADNALY 430 +A AE+IR +V + ++ ++ S+G + A N AD ALY Sbjct: 382 QAMEKAEQIRLSVAAMRFKLKGESL--SISASLGVAQLDDGASQDANNEAFVHRADQALY 439 Query: 431 EAKETGRNKVVVRDVVNFCES 451 AK GRN V+ D +S Sbjct: 440 RAKSGGRNCVIQADPTPASDS 460 >UniRef50_Q3JE99 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Nitrosococcus oceani RepID=Q3JE99_NITOC Length = 661 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKK 324 ++ + A R +A D LT + NR Y + A +TP+ ++MD+D FK+ Sbjct: 458 YLADLAVANRRLGQMAMTDSLTGLPNRRYAMERMEQAWAEYERNQTPFSCLVMDLDFFKR 517 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VND +GH +GD V+ + N+ S R D++ R+GGEEF V+ A +AER+R Sbjct: 518 VNDQYGHEIGDSVLLEIANVFRGSARSSDIICRLGGEEFLVVCPHTVATEAFQVAERLRR 577 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 VE + + +++SIG + E + N++YRLAD ALY+AK GRN+V + Sbjct: 578 AVEEHSWTMLDSTSV--LSVSIGLAASSEGMQHWNDLYRLADQALYQAKRNGRNRVCMAP 635 Query: 445 VVN 447 N Sbjct: 636 SPN 638 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 7/196 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKT 310 R IEV++ + ++ + + +A D LT ++N F + + + + Sbjct: 507 RMIEVIAIQAAQAVLRAQLYEQM---ERMATTDGLTGLYNHRTFQAKADEVLAQSRRYQR 563 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 + +++ D+DHFK VNDT+GHP GDQV+K V II R D++AR GGEEF +++ + Sbjct: 564 KFSLILTDVDHFKSVNDTYGHPTGDQVLKGVARIIKTMARDTDIVARYGGEEFVIIMPET 623 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 D + A ++ERIRE V+ P ++T+S+G ++A+ ++ LAD LY Sbjct: 624 DAKGAFTISERIREAVKAEVFQTEMG--PLRITMSLGIATFPDSAMEKQQLIDLADQCLY 681 Query: 431 EAKETGRNKVVVRDVV 446 +K GRN+ V D++ Sbjct: 682 HSKRNGRNQSVTVDIM 697 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 7/177 (3%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKK 324 + + LR +A D LT + NR F L + ++ P ++I DIDHFK+ Sbjct: 336 LLEVVERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLLIFDIDHFKR 395 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VNDT+GH GD V+K + ++ ++R D AR GGEEF VLL E A ALAE++R+ Sbjct: 396 VNDTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAAMALAEKLRQ 455 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 +E ++ +VT S G + + + R D ALY+AK GRN+VV Sbjct: 456 AIEEH-----DFPRVGRVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQGRNRVV 507 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 171/369 (46%), Gaps = 15/369 (4%) Query: 83 SCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFL--ALVNKVSENTK 140 + L Y T+ + + + ++ ND + Y+ + +L V K N K Sbjct: 171 NYLGYIGGTIYLKNKSVLNEFMNTHFYNDYSSVYVIDKSG-IVLYHQDKQWVGKPVSNQK 229 Query: 141 QRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMI 200 ++ F K + ++ + G P +A + + + + I ++ + + +++ Sbjct: 230 IKDAFRDKKSGTAAMPDMQGTPSLAGFDTVNSSGW-IIITLHPSQTVIDLLSSVMRSVLY 288 Query: 201 FMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSK 260 + + L + I N + ++A A + V +WY +E + + Sbjct: 289 EGAPVMALTLIALTLLAFSIANPLRLLAVSASKMEEPGVIEKIKKVPSWYFE--VEQLKR 346 Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDID 320 + + + H + AH DPLT + NR + + + + + +++DID Sbjct: 347 VILFGTLLLH--KRIGKLSLQAHTDPLTGLLNRRGIYESIELILPKSNQ--VAAIVIDID 402 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 HFK+VNDT+GH +GD VI+ + I + R DL+ R GGEEF LL D D ++A +AE Sbjct: 403 HFKRVNDTYGHNIGDDVIRLLAKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAVDIAE 462 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 R+R+ VE++ IP+ +TIS+G A + + ++AD+ALY+AK GRN+V Sbjct: 463 RLRKKVEKMPLP-----IPENITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNRV 517 Query: 441 VVRDVVNFC 449 V + V + Sbjct: 518 VTKVVPDSS 526 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 102/204 (50%), Gaps = 5/204 (2%) Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 S Y + + V+ + + R + +A+RD LT ++N YF + + Sbjct: 98 ASDYVTKPFEEGELVARVNTHLRIKELYESLQETNRQLQELANRDGLTGLYNHRYFQDAM 157 Query: 301 T--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARV 358 T Q A ++ DID FKK NDT+GH GD V+ T+ I+ S+R DL AR Sbjct: 158 TKDFQRAMRYHESLSCVLCDIDFFKKFNDTYGHQTGDIVLSTLARIVEDSLRDTDLAARY 217 Query: 359 GGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ-ENALN 417 GGEEF ++L A +AER+RE+VE+ + + VTIS+G + + Sbjct: 218 GGEEFALVLYHTPAAAAFMVAERLRESVEQHEFIAND--LSLSVTISVGVATYPHPDIPD 275 Query: 418 PNEIYRLADNALYEAKETGRNKVV 441 + AD ALY+AKE GRN+V+ Sbjct: 276 HKTLIECADKALYKAKENGRNQVI 299 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 4/211 (1%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 + LL+++ + ++ + + + I + ++ K + RD LT +FNR Sbjct: 1040 TLGLLYIATLTPGQLTPAKRQLARTVVEHLAIALANVKLQ-EKFKAQSMRDALTGLFNRR 1098 Query: 295 YFFNELTVQSASAQKTPYCV--MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 Y L + A++ Y V +++DIDHFK+ ND +GH GD+V+KTV ++ SIR Sbjct: 1099 YLEESLEQEIHRARRNHYSVGIVMIDIDHFKRFNDQFGHDAGDEVLKTVARLLQGSIRSS 1158 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 D+ R GGEE ++L + +A +E+IR +E L ++ +T S G Sbjct: 1159 DIACRYGGEELTLILPEASLSDTQARSEQIRYMIEHLQLHYENQSLG-SITASFGVACFP 1217 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVVR 443 E+ + R+AD ALY+AK GRN+VV Sbjct: 1218 EHGETLEAVLRIADTALYQAKALGRNRVVCA 1248 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 7/190 (3%) Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKV 325 + I + +A D +T IFNR +F + A A++ P +++DIDHFK + Sbjct: 151 VTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDIDHFKSI 210 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 ND +GH VGD +I + + R D+LAR+GGEEF +LL + D +A A+AER+R Sbjct: 211 NDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVAERLRGE 270 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR-- 443 V + ++ + T+SIGA + +++ R AD ALYEAK GRN+VV Sbjct: 271 VAASSLLMASGSV--RATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNRVVCHVS 328 Query: 444 -DVVNFCESP 452 D V +P Sbjct: 329 PDAVPSVAAP 338 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 15/227 (6%) Query: 230 CAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTK------NIAH 283 V+ + + ++ + W VV L ++ + LR + ++ Sbjct: 279 LIVVVGVGMDAVTAPWQAQWLAGAATSVVLCLLILGAAVALRREMLRRFEIEQEFLRLSQ 338 Query: 284 RDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 D LT + NR +F + Q A+ Q++ V+++DIDHFK+VND GHP GD+V++ V Sbjct: 339 TDSLTGLPNRRHFDEFGQREWQRAARQRSSIAVLMVDIDHFKQVNDRIGHPGGDRVLREV 398 Query: 342 VNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 +II S+ RP D R GGEEF ++L + D A +AERIR +E T + Sbjct: 399 SDIIRASLHRPGDFAGRYGGEEFAIILPETDAPAAAHVAERIRAAIEANTAEG-----VA 453 Query: 401 KVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 VT+SIG E+ AD+ALY AKETGRN+VV V Sbjct: 454 PVTVSIGLAAGLAAPKGTLAEMMIAADHALYRAKETGRNRVVSSHVA 500 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 118/233 (50%), Gaps = 11/233 (4%) Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 L DI +++ A+ LF++ ++ +++ R +E + I + Sbjct: 153 LHPDIDTATSLLCILALT-----LFLTVFAHTSY--RRAMEQQKSNDRLREQFEEIRALQ 205 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + A RDPLT ++NR + L + A AQ P +M++DIDHFK++NDT GH Sbjct: 206 DQLQEQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRINDTHGHAA 265 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD +++ + ++ + +R DL R+GGEEF +LL + A+ AE +RE E L + Sbjct: 266 GDAMLQALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREAFEALQVRH 325 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 + T+S G ++A P + AD ALY AK GRN+VVV+D Sbjct: 326 DPEVLSA--TLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVVQDEP 376 >UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI0_9BACT Length = 750 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVM 315 V L + A ++ A D LT +FN YF +L + A P V+ Sbjct: 536 VKALIAQKREFEAMLRAYHSARHRAITDGLTGLFNHAYFLEKLTREAELAGRSGRPLSVI 595 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++D+D FK NDT GH G++++K + ++ + R DLLAR GGEEF VLL + +A Sbjct: 596 MLDVDRFKHFNDTNGHETGNELLKDLARLMERCFRRSDLLARYGGEEFVVLLPNTPKSQA 655 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 LAER+R V E +T+S+G + +P ++ LAD ALY AK+ Sbjct: 656 AVLAERLRRRVAEYPFVGRESQPGGCLTVSLGVAAMPTDTSDPKQLLELADRALYRAKQN 715 Query: 436 GRNKVVVRD 444 GRN+V V + Sbjct: 716 GRNRVCVVE 724 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 12/195 (6%) Query: 263 VMVIFMCHIFSALRVTKNI---AHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIM 317 + + I R+ + + + RDPLT+++NR + LTV+ P +M++ Sbjct: 311 TISVEFADITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLMLL 370 Query: 318 DIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKA 377 DIDHFK++NDT+GH GD V+ V +I +R D+LAR GGEEF + + D + A Sbjct: 371 DIDHFKRINDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAAV 430 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGR 437 LAE+IR ++ + VTIS+G + E+ + N + + AD ALY AKE GR Sbjct: 431 LAEKIRSSIAMFSFPT-----VGAVTISVGISLL-ESKDDINALIKRADTALYAAKEMGR 484 Query: 438 NKVVVRDVVNFCESP 452 N+VV R + C +P Sbjct: 485 NRVV-RSTEDGCPNP 498 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 11/212 (5%) Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIF 291 VL I SV+ +I R E ++ + LR K A+ DPLT + Sbjct: 142 VLNRIMHEVRGLKSVNRKFIQRLEEQRGEIE-------RLREELRRVKEEANIDPLTGLR 194 Query: 292 NRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR F L+ +K P+ V+++D+D+FK++NDT+GH GD+V+K + NI+ + Sbjct: 195 NRRSFERALSEFFRDFKKFGYPFSVIMIDLDNFKQINDTYGHLAGDKVLKEIGNILRNYL 254 Query: 350 RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV 409 R D+ AR GGEEF ++L I E A +AER+R+ + T ++ + I T S G Sbjct: 255 RAKDVPARTGGEEFTIILPGITREEALMVAERLRKVIANYTVEHEDKKINP--TASFGVA 312 Query: 410 VTQENALNPNEIYRLADNALYEAKETGRNKVV 441 E P ++ RLAD LY+AK G+N VV Sbjct: 313 EVNEQVETPEDLLRLADENLYKAKRRGKNTVV 344 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 6/196 (3%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTP 311 I S+LT + + LR + RDPLT ++NR Y + L + + K+P Sbjct: 511 LITAFSELTALAFANVRLRENLRY---QSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSP 567 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++++D+DHFKK+NDT+GH GD +K + I+ + IR D+ AR GGEEF V + D Sbjct: 568 ISLLMLDLDHFKKINDTYGHDAGDVALKELGKILQEDIRVGDIAARYGGEEFIVAFYNTD 627 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 + K AE IRE V RL + +T+SIG V + N NE+ AD ALY Sbjct: 628 EKTIKTRAESIREAVSRLQVKYGAQPVG-PITVSIGVAVYPTDGRNTNELIESADKALYF 686 Query: 432 AKETGRNKVVVRDVVN 447 AK G+N++V+ ++ Sbjct: 687 AKTNGKNRIVLYSEID 702 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 4/181 (2%) Query: 271 IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDT 328 + + + +A D LT + NR F L ++ P +++ D+D+FK NDT Sbjct: 188 LKKTNQELQRLALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVDYFKPYNDT 247 Query: 329 WGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 +GH GD + + I +I R DL+AR GGEEF ++L + A +AERIR+ VE Sbjct: 248 FGHQAGDDCLHKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVAERIRKQVE 307 Query: 388 RLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 L +P VT+S+G + L+ + + AD ALY+AK GRN V+ + Sbjct: 308 NLRVPHPGSQSSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRNCTVIAESP 367 Query: 447 N 447 + Sbjct: 368 S 368 >UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R031_9DELT Length = 493 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 5/182 (2%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDI 319 + + +F +R A D LT I+NR +F + Q+ ++ +DI Sbjct: 181 LAVALERARLFENVRK---EAMHDGLTGIYNRRFFLECAERELHKCQRGSNSLSLLFIDI 237 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFK VND +GH GDQV++ + I+ IR D+ AR GGEEF VLL D + E A LA Sbjct: 238 DHFKDVNDNFGHVFGDQVLRQLAKILQCGIRQSDIPARYGGEEFVVLLPDTNGEAACCLA 297 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 E++R V P + P+ + +++G E+ ++ R+AD LY+ KE GRN+ Sbjct: 298 EKLRSKVAEDLVATPPHEQPKTINLTVGVASYPEDGKTVIDLLRVADRRLYKGKEEGRNR 357 Query: 440 VV 441 VV Sbjct: 358 VV 359 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 6/195 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKT 310 + V++ + I + L +N + RDPLT +FNR Y L + A Sbjct: 815 QLARTVAEQMALAIANLQLREEL---QNRSIRDPLTGLFNRRYLEESLEREINRACRNDH 871 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 V+++DIDHFK+ NDT+GH GD V+K V ++ S+R D+ R GGEE ++L + Sbjct: 872 NVGVIMIDIDHFKRFNDTFGHDGGDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEA 931 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 E AE++R+ ++++ ++ ++ +T S+G E+ + + + + AD ALY Sbjct: 932 SIENTYKRAEQVRKLIKQINIEHKRQSLG-TITASLGVACFPEHGMTGDAVVQRADTALY 990 Query: 431 EAKETGRNKVVVRDV 445 +AK+ GR++VV +V Sbjct: 991 QAKKEGRDRVVGAEV 1005 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 9/193 (4%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPY 312 R E++S+ + + +I + A DPLT + NR T+Q A++ P+ Sbjct: 346 REAELLSR--AIRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEE--TMQKWMAEQIPF 401 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 +M+MD+D FK +NDT+GH GD+V++ II S+RP+D+ R GGEEF VL++ Sbjct: 402 SIMMMDLDRFKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVSCRFGGEEFVVLVSHTGL 461 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 E A +AERIR +E T I Q++T+S G +A++P + +AD A+Y+A Sbjct: 462 EEAYQVAERIRRALETRT-----NPIGQRLTVSQGIAHYPSHAVSPEGLLHVADEAMYKA 516 Query: 433 KETGRNKVVVRDV 445 K GRN+ ++ + Sbjct: 517 KRAGRNQTMIAEE 529 >UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFL9_THIDA Length = 843 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 3/186 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVM 315 V + V+ + + A + + DPLT + NR + + + Q+ P + Sbjct: 644 VESVLVVERDIDDLKRAQEALEELTLLDPLTGVANRRFLERFVGREWMREARQRLPIAAV 703 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTER 374 ++DIDHFK ND +GH GD ++TV + ++ RP D+L R GGEEF VLL + D Sbjct: 704 MVDIDHFKDYNDHYGHAQGDACLRTVSQTLRGALHRPADILVRYGGEEFIVLLPESDLAA 763 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A+ +AER+R+ VE L +P I +VTIS+G Q + +++ AD ALY AK+ Sbjct: 764 AREIAERLRQAVEALALPHPTSPIGDRVTISLGVAAVQAHEGEFDQLLIAADAALYRAKK 823 Query: 435 TGRNKV 440 GRN+V Sbjct: 824 KGRNRV 829 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 8/192 (4%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--P 311 +E++ + I H+F+ R A D LT ++NR FF + + +Q+T P Sbjct: 484 ALELLGATAAIAINNAHLFAEARRH---ATIDELTGVWNRRTFFENVRREFQRSQRTLHP 540 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++++D+DHFK VNDT+GH GDQV++ V +R D++ R GGEEF V L + D Sbjct: 541 LAILMIDVDHFKSVNDTYGHAAGDQVLRGVAERCRNQLRVIDIIGRYGGEEFAVALPETD 600 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALY 430 A +AER+R VER +I +TIS+GA V ++ + + + AD ALY Sbjct: 601 IHAAGQIAERLRIAVERAPFVTDYGSI--SLTISVGAAVYHPDDHVTLDAVIDRADRALY 658 Query: 431 EAKETGRNKVVV 442 AK +GRN V V Sbjct: 659 IAKRSGRNSVRV 670 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 6/196 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKT 310 + + V++ + I + L +N + RDPLT +FNR Y + A Sbjct: 775 QLAKAVAEQVSLAIANIKLRERL---ENQSIRDPLTGLFNRRYLEQFFLQEIGRAKRYNH 831 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 V++ DIDHFK+ ND GH GD V+KT+ I+ +IR D+ R GGEE ++L Sbjct: 832 SIGVIMGDIDHFKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQT 891 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 E AE +R+ + + + + +T+S+G + I + AD ALY Sbjct: 892 SLEDTLVKAESLRQAIASMEVEYKGKELG-TLTVSLGVACYPNHGETMVNIIQAADRALY 950 Query: 431 EAKETGRNKVVVRDVV 446 +AK GRN+VV+ D V Sbjct: 951 QAKAAGRNRVVMADEV 966 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 113/207 (54%), Gaps = 11/207 (5%) Query: 248 TWYISRTIEVVSKLTVMVIFMCHIFSALRVT-------KNIAHRDPLTNIFNRNYFFN-- 298 T Y +++ V+ + ++V+ C++F + R I+ RDPLT ++NR F N Sbjct: 315 TQYKTQSSFVLVAMAIIVLLTCYLFVSRRKLYLAQQKLMRISERDPLTGLYNRRKFMNYY 374 Query: 299 ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLAR 357 E ++A KTP V+++DIDHFK ND +GH GD + V I I RP D AR Sbjct: 375 EKEWKAAQRSKTPLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITRPRDCTAR 434 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA-L 416 GGEEF LL + D A +AE+IR VE+L + A +T+SIG QE + Sbjct: 435 YGGEEFIGLLPETDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITSLQEGDKI 494 Query: 417 NPNEIYRLADNALYEAKETGRNKVVVR 443 N E+ LAD ALYEAKE GRN V + Sbjct: 495 NRMELINLADKALYEAKEAGRNCVKIA 521 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 4/186 (2%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMD 318 L + + + + A D LT + NR F + ++ AQ++ ++++D Sbjct: 315 LQSRIQILMQLKQSQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIMLD 374 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKA 377 IDHFK ND +GH GD ++TV I SI R D++ R GGEEF V+L + D + A+ Sbjct: 375 IDHFKPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGAQM 434 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETG 436 +AERIR+ + +L ++ + +TIS G + +P+E+ LAD LY+AK G Sbjct: 435 IAERIRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKAQG 494 Query: 437 RNKVVV 442 RN+V + Sbjct: 495 RNQVAI 500 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 172/404 (42%), Gaps = 24/404 (5%) Query: 43 YLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEER 102 +L + + + + + F LYF +++ N SL +S L++ ++ ++ + Sbjct: 181 HLDIALMVGMMLALVFYNGLLYFATSKKE--NIYYSLYLISGLVWIALSYGLVAKAFNAY 238 Query: 103 LTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGP 162 + V N I +L +A+ + + + L + + FV+G Sbjct: 239 GDAVFVLNLSLIT----MPIFLLLFMMAIFETHEYFRTEHRVLQGMLAL-LVVTFVYGLF 293 Query: 163 IVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWN 222 +A L L + + + + K ++ +L + + FNG + Sbjct: 294 DIATALKPASSLAALMMVVTFSVSISLFRKGHP---LVKFFLVGHTFFVVFNGFAVLYYK 350 Query: 223 GVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIA 282 G+ + +++ + V + + + ++ + + I S K A Sbjct: 351 GL-----------VQPNYINSHGVGIGIVLEALTLAFIISYRIKVLEDIRSKQDELKRQA 399 Query: 283 HRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 DPLT +FNR YF E ++ A P V+ +DIDHFK VNDT GH VGD V+ Sbjct: 400 STDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDHFKAVNDTHGHNVGDLVLVE 459 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 V ++ + R DL+AR GGEEF +LL D AERIR VE + D + + Sbjct: 460 VASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAERIRNAVEAMVIDGGD-GLAV 518 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +VT+S+G + + AD +LYEAK GRN+V D Sbjct: 519 RVTVSVGVAEVNPLLESVEGAVKRADRSLYEAKAGGRNRVCGFD 562 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 4/191 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQ 308 + R +V +T + + K + D LT ++NR Y+ + + Sbjct: 131 VERFCMLVYDVTEQALGKRGMEHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRR 190 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 + P +++DIDHFK++NDT+GH GD+VIK + +I + +R DL R GGEEF ++L Sbjct: 191 EKPSTALMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILN 250 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D E AK +AERIR+ +RL ++ +I T+S+G + AD A Sbjct: 251 DSSVEDAKIVAERIRQLAQRLVVEHEGESI--SFTVSLGLAQFSPDFKGAMAWLECADQA 308 Query: 429 LYEAKETGRNK 439 LYEAKE GRN+ Sbjct: 309 LYEAKENGRNQ 319 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 9/194 (4%) Query: 253 RTIEVVSKLTVMVIFMCHIF-SALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQK 309 I + L V++ F +IF L + ++ D LT ++N+ F L +Q A K Sbjct: 275 TNITLSFLLAVILGFSVYIFLKDLEKFRYLSETDRLTGLYNKGKFNEVLQREIQRAKRYK 334 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 P ++I DIDHFKK+NDT+GH VGD+V+K + +I K+IR D AR GGEEF +L + Sbjct: 335 RPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEFVILAPE 394 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNAL 429 + E AK LAE++R+ VE KVTIS+G + + P + AD AL Sbjct: 395 TNVEGAKKLAEKLRQAVETYKFPT-----VGKVTISLGVAQLEPDEK-PEDFIVRADMAL 448 Query: 430 YEAKETGRNKVVVR 443 Y+AKE GRN+V + Sbjct: 449 YKAKEGGRNRVEIA 462 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 2/166 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 +++A D LT NR FF E ++ AS V+++DIDHFK+VND GH VG Sbjct: 310 QLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDHFKQVNDRHGHAVG 369 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D+ +K I ++R D R+GGEEF +L + A +AER+R+ VE + Sbjct: 370 DKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAERLRQAVEAIALPLG 429 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 + P ++T S+G Q + +++ AD ALY AK GRN+V Sbjct: 430 DDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNRV 475 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 6/193 (3%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--P 311 E +++ + I + LR +N+ RDPLT +FNR Y + A A+++ Sbjct: 884 LAETIAEQLALAIANLQLRETLRQ-ENL--RDPLTGLFNRRYLQEFFEQELARAKRSGDS 940 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++++DID+FK+ ND +GH GD V+K V + +R D++ R GGEE +L+ Sbjct: 941 IGILMLDIDYFKRFNDEFGHDAGDMVLKQVARALLNQVRASDVVCRFGGEEIAILMPGAS 1000 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 E + A++IR+ + +L E +P +TISIG E+ L + + + AD +LY+ Sbjct: 1001 LEVSARKADQIRQAIAQLIISYHEQTLP-SLTISIGVAAFPESGLASDTLIKSADTSLYQ 1059 Query: 432 AKETGRNKVVVRD 444 AK GRN VVV Sbjct: 1060 AKAAGRNCVVVHQ 1072 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 7/226 (3%) Query: 225 TVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI--- 281 + I NI+L + YS S Y + +SK+ + + S+ R + Sbjct: 188 SYICLPITEGNITLGILQLYSKSKNYFDEAL--ISKVKSYIEVAKPVISSKRTLHQLRKN 245 Query: 282 AHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A D LT ++NR + L ++ V++MDID+FK++NDT+GH GD V+ Sbjct: 246 ATTDKLTKLYNRRFLEQYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHNAGDAVLV 305 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 T +I + +R DL+AR GGEEF +L DT+ A +AERIRE++ Sbjct: 306 TFARVILRCLRQTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKINDVQL 365 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 ++ S G +A N N++ + AD ALY+AK+ G+N+V+ Sbjct: 366 PNISCSFGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNRVITYSE 411 >UniRef50_Q39SX4 Diguanylate cyclase (GGDEF domain) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SX4_GEOMG Length = 353 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 66/166 (39%), Positives = 100/166 (60%), Gaps = 3/166 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 KN++ RD LT ++NR F L V++ P+ ++++D+D FK+VNDT+GH GDQ Sbjct: 182 RLKNLSMRDHLTGLYNRRVFEAMLEVEARKRTTKPFSLLLIDLDDFKRVNDTYGHGAGDQ 241 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V+ V ++ S R D+++R GGEEFGVLL D + A+ +AER R+NV L+ + Sbjct: 242 VLVAVAKMLRLSFRKSDVVSRYGGEEFGVLLPDTSQDSARVVAERFRQNVATLSLPVNKE 301 Query: 397 AIPQKVTISIGAV-VTQENALNPNEIYRLADNALYEAKETGRNKVV 441 I T+S+G VT + ++ AD ALY+AK TG+N+V Sbjct: 302 KIMP--TVSVGIASVTLRLGIEVADVIEEADRALYQAKVTGKNRVC 345 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 10/218 (4%) Query: 236 ISLLFMSRYSVSTWYISRTIEV---VSKLTVMVIFMCHIFSALRV---TKNIAHRDPLTN 289 + L R + W T + V+V I + R+ K++A D LT Sbjct: 189 VELTVRCRDGTTRWAEVNTAALPPGAGDGAVLVCVFRDISARKRLESDLKHLATTDGLTG 248 Query: 290 IFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 +NR F +Q A + P +++MDIDHFK++ND +GH GD+V++ +V + Sbjct: 249 AYNRRSFVEVCGQELQRADRRARPTSLLLMDIDHFKRLNDRFGHAAGDEVLRQIVETGRR 308 Query: 348 SIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIG 407 +R +D++ R+GG+EF VLL E+A +AE++R ERL P T+S G Sbjct: 309 VLRSEDVVGRIGGDEFAVLLPATTLEQAGRVAEQLRTTYERLAV--PARGGTATFTVSFG 366 Query: 408 AVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 + + E+ + AD ALY AK GRN V + Sbjct: 367 VAEWKPHLRTVEELLQRADRALYAAKNAGRNCVRTEEA 404 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 3/189 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVM 315 ++ + + + I + + ++ D LTN+FNR +FF+ + + +S ++ VM Sbjct: 356 ITGICGISTDITPIKHYQKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVM 415 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++DIDHFK++ND GH GD V+ + IG S+R D+ R+GGEEF +LL + D E+A Sbjct: 416 MLDIDHFKRINDGHGHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQA 475 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 +AER+R+ V D + T+SIG + ++ + AD ALY AK + Sbjct: 476 SIMAERLRKQVAETWLDIGDGRT-LNCTLSIGLATKSDQQIDLENLLHQADTALYAAKNS 534 Query: 436 GRNKVVVRD 444 GRNKV D Sbjct: 535 GRNKVSCAD 543 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 6/192 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKT 310 + V++ M I ++ + L ++ + RDPLT +FNR Y L+ + A QK Sbjct: 1191 QLAHTVAEQIGMAIANLNLRATL---EHQSIRDPLTGLFNRRYLEEYLSQEIARAQRQKH 1247 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P V++MDID+FK NDT+GH GD V++ V ++ + +R D+ R GGEE ++L Sbjct: 1248 PIGVIMMDIDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREYDVACRYGGEEMTLILPGS 1307 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 E AE+IRE + L + + +T S G ++ ++ + AD ALY Sbjct: 1308 SLENTSMRAEQIREAIASLVVASGGQHLG-SITASFGVAAFPKHGSIGIDLIQAADAALY 1366 Query: 431 EAKETGRNKVVV 442 AK GRN+VV+ Sbjct: 1367 RAKADGRNRVVI 1378 >UniRef50_C9R8E3 Diguanylate cyclase n=1 Tax=Ammonifex degensii KC4 RepID=C9R8E3_AMMDK Length = 414 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 13/210 (6%) Query: 238 LLFMSRYSVSTWYISRTI--EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 L F+ R +++ R E + +L + +++ R K +A RD LT ++NR Sbjct: 208 LFFLRRSPAPAFFLRRAALRENLGRLGAAALVNSYLY---REVKELAERDGLTGLYNRRK 264 Query: 296 FFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 F+ ++ A + ++++D+D+FK NDT+GH GD+ ++ + +IGK IR D Sbjct: 265 FWEIFLKELERAKRYRRKLAILLLDVDNFKDYNDTFGHLAGDECLRRIGEVIGKEIRASD 324 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 AR GGEEF +LL + E A A+AER+R VE + P TIS+G V E Sbjct: 325 TAARYGGEEFVILLVETGGEGAVAVAERLRHRVEDIGKREPFP------TISLGVAVFPE 378 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVR 443 +A + + ADNALY AK +G+N+ V R Sbjct: 379 DAQSAEALLTCADNALYTAKRSGKNRTVWR 408 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 17/215 (7%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 L +S YI V +T VI+ + +A D LT +FNR Sbjct: 103 CTFGPLRNDNKEISAIYI-----TVQDVTDFVIYEHKLI-------QMAKVDGLTGVFNR 150 Query: 294 NYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 Y L ++ + P +M++DIDHFK++NDT GH GD ++ + ++ + +R Sbjct: 151 RYLDTRLQEELERSRRHGNPLSIMMLDIDHFKEINDTHGHICGDYTLRKISELLLELVRT 210 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D+L R GGEEF +L + E+A LAER R V ++ +VT+SIG Sbjct: 211 SDILGRYGGEEFCCILPETSFEQALVLAERCRTQVAASQFSCTDHQ--SRVTVSIGVTDL 268 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 + + I + AD+ALY+AK TGRN+V V Sbjct: 269 HRDD-TLDSIIKRADDALYQAKRTGRNRVCSSPVP 302 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 66/184 (35%), Positives = 95/184 (51%), Gaps = 7/184 (3%) Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTW 329 + + +A D LT + NR F L + ++++D+DHFK+VNDTW Sbjct: 971 RRHEQTLERLATTDALTGLANRRAFMARLEEERMRPSMGGRGGMLIMLDLDHFKRVNDTW 1030 Query: 330 GHPVGDQVIKTVVNIIG-KSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 GH GD+V+ + ++ +R DL R+GGEEF VLL D E A +AER+R +E+ Sbjct: 1031 GHAAGDEVLVHLARLLRGDLLRATDLAGRLGGEEFAVLLPDTTAEEALGVAERLRRALEQ 1090 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + A +VT+S+G +AL + AD ALYEAK TGRNKVV+ Sbjct: 1091 SKIHVGDGAT-LQVTMSLGVAPITGDAL---AVLAHADIALYEAKNTGRNKVVLARSDEP 1146 Query: 449 CESP 452 P Sbjct: 1147 VPLP 1150 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 +V +T + + I +A I+ D LT + NR + + + + P + Sbjct: 131 IVYDVTEVAVNRLQIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRHEHPCSL 190 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++ DIDHFK +ND++GHP GD+VI+ + IR D+ R GGEEF ++L+D DTE Sbjct: 191 VMFDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLSDTDTEG 250 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A +AERIR ++ LT ++AI + T+S+G + N AD ALY+AK+ Sbjct: 251 ALVVAERIRNQIQELTVHYEDFAI--QFTVSLGVAQLTQQMTNRTAWIDCADKALYQAKK 308 Query: 435 TGRNKVVVR 443 GRN VV Sbjct: 309 NGRNNSVVY 317 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 2/176 (1%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKK 324 ++ + + ++ D LT + NR Y +L Q A+ P +M+ DIDHFK Sbjct: 275 YIDILRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGNQPLSLMMTDIDHFKA 334 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VNDT GH GD V++ + + ++RP D++ R GGEEF VL+ + + A A AERIR+ Sbjct: 335 VNDTHGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPNTPGDLACAAAERIRK 394 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 V + ++T+S G Q +++ AD ALY+AK GRN+V Sbjct: 395 AVAAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTALYQAKTGGRNRV 450 >UniRef50_Q7NQK2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NQK2_CHRVO Length = 585 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 7/175 (4%) Query: 271 IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDT 328 + +A D LT + NR +L + ++ PY V+++D+DHFK+VNDT Sbjct: 412 LVQKAAQLAQLARNDALTGLHNRMAANEQLQEEHLRHGRSGAPYAVLLLDVDHFKRVNDT 471 Query: 329 WGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 GH GD+V++ + +I+ ++ R D +AR GGEEF +LL + D + A LAE+IR +VE+ Sbjct: 472 HGHDAGDRVLRHIADILRRAARATDFVARFGGEEFLLLLPETDADGAAVLAEKIRASVEQ 531 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + +VT+SIG P + AD ALY AK GRN+V Sbjct: 532 SQAPD-----VGRVTLSIGLATVVPADSQPEMAVKRADQALYRAKAAGRNRVEAA 581 >UniRef50_D1UJZ5 Diguanylate cyclase n=6 Tax=Burkholderiaceae RepID=D1UJZ5_9BURK Length = 477 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 103/439 (23%), Positives = 185/439 (42%), Gaps = 20/439 (4%) Query: 14 VSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVM-IALFFIDTVAFIFMQLYFIYDRRQF 72 V+L+ + + + P + ++ V AL D + + + + R + Sbjct: 35 VALMSVVVFLAAVPFAKIP----LAQVPAFIPVYESALVLNDLITAVLLFGQSVIARSRA 90 Query: 73 SNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALV 132 + S + + + + L ++ Q+ I Y+F I + + Sbjct: 91 LAALASGYLYTSAMALLHMLSFPGLFSPTGLLNAGPQSTAWI-YMFWHAGFPIFVVAYAL 149 Query: 133 NKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWK 192 K S+ + TL +++ V G L++ ES HI + + + W Sbjct: 150 LKDSKEARMTGKSVAASTLALTVGAVLGLAAAMVALATAGESLLPHIMQNHHYAPAMQWV 209 Query: 193 ASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYIS 252 A + + L +L + D+W V + A+ + ++ RY + +Y+ Sbjct: 210 AGSTWGLCLLALVVLY--RQKSRSTIDLWLMVVLCAWICDVALSAVFNEGRYDLG-FYVG 266 Query: 253 RTIEVVSKLTVMVIFM-------CHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQ 303 R + + V+++ + + +AL K +A DPLT + NR F LT Q Sbjct: 267 RIYGMCATSFVLLLLLVENTFLHSRLAAALDELKRLATTDPLTGVANRRAFEAALTAHWQ 326 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP-DDLLARVGGEE 362 AS + ++++DID FK ND +GH GD+ + V + +++R D +AR GGEE Sbjct: 327 RASHDGSTLSLLMIDIDFFKLFNDRYGHVEGDRCLVLVAECLARAVRRGSDQVARYGGEE 386 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIY 422 F VLL D + A +A R+ + V L N +K+TIS+G +A + + Sbjct: 387 FVVLLPDTNAASAAHVARRMCDAVAALCVPNEGSPSFRKITISVGVASRVIDAGSETTVL 446 Query: 423 -RLADNALYEAKETGRNKV 440 R AD+ALY AK GR +V Sbjct: 447 TRAADHALYLAKAAGRGRV 465 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 86/376 (22%), Positives = 159/376 (42%), Gaps = 38/376 (10%) Query: 79 LAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSEN 138 LA ++ L+YF ++II + L R + + +F Sbjct: 75 LAQIAFLLYFFADILIIPDMFFISG-------------LMRVVLVLGTMFCCYYLFKKHK 121 Query: 139 TKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTI 198 Q + + + + ++ ++A +S H +Y Y + Sbjct: 122 NIQ--ILDRILPIGTTVAAAAWIGLLALSISPHVATY------------------IYASA 161 Query: 199 MIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVST-WYISRTIEV 257 + + L + + I + ++ + + S F+ S W+ S I Sbjct: 162 IFILIANLCVQTQFKVAVYCSILIALFIMLGVSQFMSASQAFIFSVVFSPLWFFSIYINW 221 Query: 258 VSKLTVMVIFMCHIFSA--LRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS-AQKTPYCV 314 + L V F+ + + KN+AH D LT ++NR +F + + C+ Sbjct: 222 NNILNVRRSFLRSLLDEWNYQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASSCL 281 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++ D+DHFK +ND++GH VGD+V++ + + K +R D+LAR GGEEF LL D + Sbjct: 282 LMFDVDHFKNINDSYGHDVGDRVLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQD 341 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 + +AERIR +++ + TISIG + + ++ + AD ALY+AK+ Sbjct: 342 SLVIAERIRCAIQKQYIYVEPNHT-IRFTISIGVAELESHTQPLEDLIKQADIALYQAKK 400 Query: 435 TGRNKVVVRDVVNFCE 450 +GRN++ V + Sbjct: 401 SGRNRIEVYHPDMLNK 416 >UniRef50_A8TQW5 GGDEF domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQW5_9PROT Length = 360 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 4/196 (2%) Query: 252 SRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASA--QK 309 +R + +L + + +L T+ A D LT + NR F EL +A A Sbjct: 148 ARNARLHGRLERSAEEIARLRKSLVATRREASTDGLTGLANRMQFERELRSAAAKAMEDG 207 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 T C+++ DIDHFK NDT+GH VGDQV++ V ++ ++IRP DL AR GGEEF V+L + Sbjct: 208 TTLCLLMADIDHFKTFNDTYGHMVGDQVLRLVGRVLIEAIRPGDLAARFGGEEFVVVLPE 267 Query: 370 IDTERAKALAERIRENV-ERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + A +AERIRE + E+ VT+S+G Q + ++ AD Sbjct: 268 CRLDEAARIAERIRERIGEKHVVRRSSGDDLGTVTLSLGVTAYQPGEV-VGQLIERADTG 326 Query: 429 LYEAKETGRNKVVVRD 444 LY+AK+ GRN+V V D Sbjct: 327 LYDAKQAGRNRVAVVD 342 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 68/161 (42%), Positives = 88/161 (54%), Gaps = 5/161 (3%) Query: 282 AHRDPLTNIFNRNYFFNE--LTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A DPLT I NR Y + L ++ TP V++MDIDHFKKVNDT+GH VGDQV+ Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLM 371 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V R DL++R GGEEF +LL + A+ AE+IR+ +E L+ E + Sbjct: 372 EVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNV- 430 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 VT S G Q + + AD ALY+AK GRN V Sbjct: 431 -SVTASFGVSQWQ-GETKIDRVVSRADAALYQAKHDGRNCV 469 >UniRef50_C6XL77 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alphaproteobacteria RepID=C6XL77_HIRBI Length = 459 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 2/177 (1%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKK 324 ++ + + L + +A D LT + NR Y N+L + A+ P +++ D+DHFKK Sbjct: 277 YIDSLRARLDQSMELAVTDQLTGLHNRRYMENQLEQFMKRANMGGGPVSILLCDLDHFKK 336 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VND GH VGD+V++ + + +IRP D+ R GGEEF V++ D + A+ AERIRE Sbjct: 337 VNDGHGHDVGDEVLRQFSDRLMHNIRPSDIACRYGGEEFMVIMPDTTIQMAQLTAERIRE 396 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 V+ VT+S GA VT + ++ + AD ALY AKE GRN++V Sbjct: 397 KVDGAPFSINNGLGRLDVTMSGGASVTFPPDDSVAQLIKRADEALYNAKENGRNRIV 453 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 69/187 (36%), Positives = 94/187 (50%), Gaps = 9/187 (4%) Query: 265 VIFMCHIFSALRVTK----NIAHRDPLTNIFNRNYFFNELTVQS--ASAQKTPYCVMIMD 318 V+ M SA + + +A DPLT + NR FF A TP ++++D Sbjct: 175 VVGMTQDISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCGTPLSMIMLD 234 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 IDHFK VND +GH GD V++ V + +S+R DL RVGGEEF VL D L Sbjct: 235 IDHFKAVNDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPGTDLAGGVEL 294 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGR 437 AER+R +E + A+ KVT S G +++ P+ AD ALY AK GR Sbjct: 295 AERLRLALEDMVVTADCRAV--KVTASFGVAQCRDDRDAAPSACLTRADRALYAAKRGGR 352 Query: 438 NKVVVRD 444 N+V + Sbjct: 353 NRVCLES 359 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 8/165 (4%) Query: 280 NIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 + DPLT I+NR Y N+L V+ A P +++ DID FK +ND++GH VGD+V Sbjct: 613 KQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFFKHINDSFGHDVGDKV 672 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K + ++ ++IR D+ AR GGEEF ++ + E AK LAE++R + L + Sbjct: 673 LKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKLRSLIRNLHFE----- 727 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VT S G +++ + + AD ALYEAK+TGRNKVVV Sbjct: 728 EGINVTCSFGVASLEKHD-TKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 4/191 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT 310 + +V +T + + +A ++ D LT ++NR Y+ L+ + ++ Sbjct: 125 VQNLAVIVYDVTDIATSKLELKAANDRLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRH 184 Query: 311 --PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 +++ DIDHFKKVNDT+GH VGD VI+ V + + R D+ R GGEEF +LL Sbjct: 185 AHDLSLIMFDIDHFKKVNDTYGHQVGDDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLI 244 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D D E A AER+R+ +E PE + +VT+S+G +E+ + N AD A Sbjct: 245 DSDAENALLFAERLRKAIENRRVSTPEGEL--QVTVSLGVAPWKESFHHYNAWIEAADKA 302 Query: 429 LYEAKETGRNK 439 LY +K+ GRN+ Sbjct: 303 LYTSKDEGRNR 313 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 6/204 (2%) Query: 244 YSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELT 301 Y +Y + V + + + A DPLT IFNR + + E+ Sbjct: 107 YITKPFYAPELLARVRVHLELKYTKDELNKKSAAFEKQAITDPLTGIFNRRHLMSISEIE 166 Query: 302 VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGE 361 Q A + ++++DIDHFKKVNDT+GH VGDQV+K + + +R D+ R GGE Sbjct: 167 YQKAVNYNRLFSIIMLDIDHFKKVNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGGE 226 Query: 362 EFGVLLTDIDTERAKALAERIRENVERLTGD----NPEYAIPQKVTISIGAVVTQENALN 417 EF ++L D + A +AER+R+ + N + K+TIS+G + Sbjct: 227 EFAIILPGADLKIALKIAERLRQAIADFYIPIYDSNSSSNLKIKITISLGVTTYHIDDDK 286 Query: 418 PNEIYRLADNALYEAKETGRNKVV 441 ++++R AD+ALY+AK GRN+V Sbjct: 287 LDKMWRRADDALYQAKAKGRNQVC 310 >UniRef50_B8FL29 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Bacteria RepID=B8FL29_DESAA Length = 593 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 12/201 (5%) Query: 250 YISRT---IEVVSKLTVMVIFMCHIFSALRVTKN----IAHRDPLTNIFNRNYFFN--EL 300 YIS++ +S+ + + R+ + ++ D LT + NR YF ++ Sbjct: 392 YISKSRADAATLSRTIATALEKARLRKETRLAQEKIVDMSITDELTGLSNRRYFNEVVDI 451 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 VQ A +P + +MD+DHFK VNDT+GH GD+V+ ++ + R D++ R GG Sbjct: 452 EVQKARNNGSPLTLCMMDLDHFKNVNDTYGHLTGDKVLAETGALLKQGFRSHDMIFRYGG 511 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ-ENALNPN 419 EEF V+L D D E AK ER RE+V+ D + K+TISIG E + Sbjct: 512 EEFAVILPDTDLEHAKRACERFRESVQEHVMDAKVKQV--KITISIGIANMPGEQIMEAG 569 Query: 420 EIYRLADNALYEAKETGRNKV 440 E+ AD+ALY AKE GRN+V Sbjct: 570 ELIDAADHALYRAKELGRNRV 590 >UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD73_MAGSM Length = 513 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 7/230 (3%) Query: 223 GVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIA 282 + V+ V + L+ +V YI ++V + + VI + LR + A Sbjct: 276 CMPVLHSGTVGNVVQLVVEPDMAVMFPYIIPFLQVFLRESSSVIESKRLMEKLRES---A 332 Query: 283 HRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 +DPLT + NR + AS+Q+ V++MD+DHFK VNDT GH VGD V+K+ Sbjct: 333 LKDPLTGLNNRRFLEEYERTIVASSQRKEMFLSVLMMDLDHFKMVNDTHGHQVGDAVLKS 392 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 + ++ + R DL+ R GGEEF V+L + +AE+IRE VERL + P + + Sbjct: 393 LAGVLMQQTRASDLVVRYGGEEFMVVLQNERPHMGNQIAEKIRETVERLKINVPGGCLQK 452 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCE 450 TISIG + + +++ AD ALY AKE GRN+V+ + Sbjct: 453 --TISIGVAEFPTDGTDFDDVVEKADMALYRAKEQGRNRVISHSASETED 500 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 3/182 (1%) Query: 265 VIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHF 322 ++ + + RD LT ++NR + L + A A++ P CV+++DIDHF Sbjct: 427 MVLSLSNVRLREQLEEASIRDALTGLYNRRFLDETLARELARAERQAVPLCVLMLDIDHF 486 Query: 323 KKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERI 382 K +ND +GH +GD+ + V ++ +R DD++ R GGEEF +++ + A+ + + Sbjct: 487 KPINDDYGHALGDRALVAVAELLNAHVRRDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHL 546 Query: 383 RENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 R V L + P ++T+S+G ++ N + AD ALYEAK+ GRN++ + Sbjct: 547 RRCVSALDVEAN-VPAPIRLTVSLGLACYPQHGDNAEHLLHSADMALYEAKQGGRNRLTI 605 Query: 443 RD 444 Sbjct: 606 AS 607 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 3/195 (1%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASA 307 + + + + + V L+ T+ + +D LT ++NR YFF + + Sbjct: 172 FSKNDLRLFAAVAENVAIAVSNAMTLQQTRELIRKDELTGLYNRRYFFERFEREVYRSRR 231 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 +M++DIDHFK+ ND++GH GD+V+KT+ I S+R D++AR GGEEF VLL Sbjct: 232 YGRTISLMMIDIDHFKEYNDSYGHLRGDRVLKTISRIFESSLRKIDVVARYGGEEFLVLL 291 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAI-PQKVTISIGAVVTQENALNPNEIYRLAD 426 + E A +AE++R+ VE++ + + P +TI+IG ++A P LAD Sbjct: 292 PETSRENAIRVAEKLRQAVEKVDFNEDAPNLGPCALTITIGVSAIPDDANEPILALDLAD 351 Query: 427 NALYEAKETGRNKVV 441 ALY K GRN+V Sbjct: 352 KALYMGKAQGRNQVC 366 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 108/223 (48%), Gaps = 12/223 (5%) Query: 233 LYNISLLFMSRYSVS---TWYISRTIEVVSKLTVMVIFM-------CHIFSALRVTKNIA 282 L NI L+ M Y ++ T + R ++ + ++V + A Sbjct: 272 LENIPLILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATLGLRSYLTTVRQREELRRQA 331 Query: 283 HRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 DPLT + NR + + + A + ++DIDHFK +NDTWGHP GD+VI+ Sbjct: 332 DTDPLTGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQV 391 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 + + S R D R+GGEEF +L + D E A +AER+RE VE +T + P Sbjct: 392 LAAAMAASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPV 451 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + T+SIG Q + +I AD ALY AK GRN+V + Sbjct: 452 RFTVSIGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRVEMA 494 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 106/194 (54%), Gaps = 4/194 (2%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVM 315 + + + A + IA+ D LT + NR F L + ++ P ++ Sbjct: 227 LYAQQALEATNKKLDEANKQLSLIANHDALTGLANRRRFDEYLQQIWKQTQREQQPLSLL 286 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTER 374 I DID FK+ NDT+GH GD ++TV I ++I RP DL+AR GGEEF ++L + D E Sbjct: 287 ICDIDFFKQYNDTYGHLEGDICLRTVAQKIHQTIVRPLDLVARFGGEEFAIVLPNTDLEG 346 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAK 433 + +AER+R +++ + ++ + VT+SIGA + + + + + AD ALY+AK Sbjct: 347 GQVVAERLRMIIQKSQLPHRGSSVSEFVTVSIGAATVRSHPHTSVSSLISRADQALYQAK 406 Query: 434 ETGRNKVVVRDVVN 447 ++GR++VV + Sbjct: 407 QSGRDQVVALSITE 420 >UniRef50_D0LIT1 Diguanylate cyclase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIT1_HALO1 Length = 732 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYC 313 E++ + V + + +A D LT + N F + L + A + P Sbjct: 532 EMLGIIANQVAVSLQNGMMYKTMETMATTDGLTGLTNHRTFQDRLVQLLDRAERTRQPAA 591 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 +++ D+DHFK VNDT+GHP+GD+V++ V ++ +S+R D+ AR GGEEF V+L D E Sbjct: 592 ILLCDVDHFKNVNDTYGHPIGDEVLRQVAGVLLRSVRKIDIPARYGGEEFAVVLEATDLE 651 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAK 433 A LAERIR++V L D+ + P +VT+SIG ++A + + AD+ALY AK Sbjct: 652 GAMNLAERIRKDVAALVVDSDKG--PFQVTMSIGIASFPDDATDRAVLIERADSALYLAK 709 Query: 434 ETGRNKVVVRDVV 446 E+GRN+ + + Sbjct: 710 ESGRNRCMSYQTL 722 >UniRef50_Q2BQS0 GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQS0_9GAMM Length = 314 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 10/223 (4%) Query: 227 IAFCAVLYNISLLFMSRYSVSTWYISRTIEV------VSKLTVMVIFMCHIFSALRVTKN 280 + C LL S WY R + V ++ + + I + + K+ Sbjct: 92 LLICEYEIKPELLRTKCELSSHWYEGRVVPVEGENGEIAAVIWLAINITEKKRLEQRLKD 151 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A +DP+T +NR +F + A T Y + +DID+FKKVND +GH VGD VI Sbjct: 152 LAEKDPMTGAYNRRFFRESIDQHYATFKRYGTTYSLAFIDIDYFKKVNDQFGHDVGDGVI 211 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 +V I + +R DLL+R GGEEF VL I+ + A +AER+R +E + + + Sbjct: 212 CHLVTHIQEQLRTTDLLSRFGGEEFVVLFPHINLDEACLVAERLRATIEMTPYKSINHKV 271 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 P T+SIG + + +I + AD+ALY++K +GRNKV Sbjct: 272 P--FTVSIGISEVRAEDESVEDILKRADSALYQSKSSGRNKVT 312 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 8/184 (4%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDI 319 + + +F +R+ A D LT + NR +F L + + P +M++DI Sbjct: 334 LALAVKNALLFREMRL---QADHDGLTQLHNRRHFDTRLREELDRHGRYSMPLTLMMLDI 390 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 D+FK++ND +GH GD V++ + +++ ++IR D AR GGEEF +L D ++A+ LA Sbjct: 391 DYFKQINDRFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDEQQARVLA 450 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNP-NEIYRLADNALYEAKETGRN 438 ER+R+N+E + I + T+SIG + AL P +E+ R AD ALY AK GRN Sbjct: 451 ERLRKNIESRVFRHHGKTI--QATVSIGLTGFKPGALTPRDELVREADAALYLAKANGRN 508 Query: 439 KVVV 442 V Sbjct: 509 VVCT 512 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 104/182 (57%), Gaps = 5/182 (2%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDH 321 M + + + + ++ DPLT++ NR + + Q +S + P ++I+DID+ Sbjct: 124 MKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVDKEFQRSSRKGAPLSLVILDIDY 183 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FKK+NDT+GH GD+V+ + +I+ + +R DL AR GGEEF +LL + + A ++AER Sbjct: 184 FKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYGGEEFVLLLPETPVQEALSIAER 243 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKV 440 +R V+ + + +TIS+G + + + ++R AD ALY AK+ GRN+V Sbjct: 244 LRLEVQEHVFEGSLGGLV--ITISLGVATYPSSRVESIDSLFRQADEALYRAKQGGRNRV 301 Query: 441 VV 442 + Sbjct: 302 EL 303 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 6/219 (2%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + LF+S + E ++ + + + +LR + RD LT ++NR Y Sbjct: 356 LGFLFLSAPGPAPMPRLEIAEAAAEQLSLALSNLRLRESLR---RQSIRDALTGLYNRRY 412 Query: 296 FFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 L+ + A + P V+++D+DHFK+ ND GH GD ++ V ++ +R +D Sbjct: 413 LEEALSHELARCARRDLPLSVLMLDVDHFKQFNDGQGHAGGDLLLAAVGELLLTRLRAED 472 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 + R GGEEF V+L + D E A +AE+IR ++ L + + A+P +VT SIG Sbjct: 473 VACRYGGEEFTVILPETDGEEAMRVAEQIRGHIAALAVSDGQRALP-RVTASIGVASFPA 531 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 + + + + AD ALY AK GRN+V V P Sbjct: 532 DGELGSALIQKADAALYVAKRQGRNRVERHGAVAVNAEP 570 >UniRef50_Q1NY46 GGDEF n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NY46_9DELT Length = 525 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 15/220 (6%) Query: 240 FMSRYSVSTWYISRTIEVVSKLTVM-------VIFMCHIFSALRVTKNIAHRDPLTNIFN 292 ++ Y+ + ++ E + L V + + + +A DPLT + N Sbjct: 306 YLISYAPDNFLVALRKEFIVSLLVAWLLAAGLGLLFVLLARSRDEMVRLATTDPLTGLAN 365 Query: 293 RNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR 350 R F + L ++ ++ P ++++DID FKKVNDT GH VGD+V+ ++ +++R Sbjct: 366 RRSFMDRLGLEQERFKRFGNPVGLLMLDIDFFKKVNDTHGHHVGDEVLGQFATLMRQNLR 425 Query: 351 PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV-ERLTGDNPEYAIP-----QKVTI 404 DL+ R+GGEEF V+L D E A R+R V ERL G+ + +T+ Sbjct: 426 HVDLVGRLGGEEFAVVLPGADLEGTLHFANRLRCGVGERLQGEVCGHRFSTSAGILNITV 485 Query: 405 SIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 SIG V Q + R AD ALY AKE GRN++ V + Sbjct: 486 SIGVAVLQPGDDGVEPVLRRADTALYRAKENGRNRIEVEE 525 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 4/192 (2%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTP 311 E+ K+ + + + + + D LT I NR F L + ++ P Sbjct: 134 MAELHRKIEQERVLKAKLEEMNQELQRLVDLDGLTQIANRRAFDQALQQEWKRLAREQAP 193 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDI 370 +++ DID FK NDT+GH GD+ +K V +I+ K+ RP D++AR GGEEF V+L + Sbjct: 194 LSLILCDIDFFKAYNDTYGHQAGDECLKQVADILRKAAKRPADVVARYGGEEFVVILPNT 253 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNAL 429 A +AE IR ++ + + + VT+S G V P+ + AD AL Sbjct: 254 SLRGAMQVAESIRSKLKSRAIVHEGSGVSKFVTLSCGVAGVIPPPKTTPDRLIAEADQAL 313 Query: 430 YEAKETGRNKVV 441 Y+AK GR++VV Sbjct: 314 YKAKVEGRDRVV 325 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 9/225 (4%) Query: 225 TVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM-----CHIFSALRVTK 279 +V+ +V + L + ++ TI + L + F+ ++ A + K Sbjct: 199 SVMGALSVTIPVVTLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNLDMAQKHLK 258 Query: 280 NIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 +A D LT + NR L Q A P C++++D+DHFKK+NDT+GHP GD V Sbjct: 259 RLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTYGHPFGDLV 318 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K V + K++R D+L R+GGEEF ++ E A LA+R+R VE + Sbjct: 319 LKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEMEKIAYEDKK 378 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + +T+S G + N + + AD+ALY AK+ GRN+VV Sbjct: 379 V--TITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVVA 421 >UniRef50_B7KW39 Diguanylate cyclase n=3 Tax=Methylobacterium extorquens group RepID=B7KW39_METC4 Length = 574 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 7/197 (3%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQ 308 ++ + + S L + + +N A RDPLT ++NR Y + L V+ A + Sbjct: 360 LAAMLPLSSALGDAMSLALSNIALREKLRNQALRDPLTGLYNRRYMEDSLERYVRLAERE 419 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 V+++D+DHFK++ND GH GD V+ I ++R D+ R GGEE V L Sbjct: 420 GRKVSVIMIDLDHFKRLNDEHGHATGDAVLCEAAAAIVGALRETDVACRYGGEEMIVFLP 479 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D D E A A AE+IR +E L+G + KV+ S+G + E+ R AD A Sbjct: 480 DCDLEDAAAKAEQIRGRIESLSGTH-----GAKVSASLGVASVPSTSGTSAELIRAADTA 534 Query: 429 LYEAKETGRNKVVVRDV 445 LY AK GRN+V V + Sbjct: 535 LYRAKHNGRNQVAVAPL 551 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 90/400 (22%), Positives = 176/400 (44%), Gaps = 32/400 (8%) Query: 69 RRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIF 128 ++QF L+ A+ + + +++ + + + + ++ + + Q C I Sbjct: 71 QKQFFLLPLAGAYAIYALAAITSLLSMHG--SPDHANPMTSDTMSNWGAYWQFGFCGFII 128 Query: 129 LALVNKVSENT--KQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNEN 186 +A+ + + + + + K T+ L + G + L++ ++ ++ Sbjct: 129 IAMAFRKATESFPQLNRIILGKNTVPFMLTPLLGIIVYMLALNAGN-LFSAIMSSSPIVT 187 Query: 187 GQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD--IWNGVTVIAFCAVLYNISLLFMSRY 244 + W + W+ + + D + IA + L ++S L + Sbjct: 188 APLGWGS---------WIMAAATFVLVRAFCSDDKLVTIFLSIAALSHLCHVSHLLIDNT 238 Query: 245 SVST-WYISRTIEVVSKLTVMVIFMCHIFSALR-------VTKNIAHRDPLTNIFNRNYF 296 S WY++ + + S T++ + + + R AH+D LT I+NR YF Sbjct: 239 PFSANWYMAHLLSLFSFTTLLAVLILQLSQFTRDLADSHAYLMEKAHKDSLTGIYNRGYF 298 Query: 297 FN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDD 353 EL + A TP ++++DIDHFK ND +GH GD+ +K + + ++ RP D Sbjct: 299 DETAELEWRRAQRNGTPISLLMLDIDHFKGYNDQFGHVKGDKCLKKIAQALHANMQRPGD 358 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-- 411 +AR GGEEF VLL E A+A+++ V++L ++ ++V++SIG Sbjct: 359 FVARFGGEEFVVLLPATTAEGCHAMAQKLHLAVQKLKISAGDH---RRVSVSIGHATWNG 415 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 + NE+ AD ALY AK GRN++V + + + Sbjct: 416 PYENGSINELLSQADLALYTAKRLGRNRIVRYEDLAHSLA 455 >UniRef50_C4KD29 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Betaproteobacteria RepID=C4KD29_THASP Length = 634 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 4/178 (2%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKK 324 F + + R + A D LTN+ NR N L A++ + P VM++DIDHFK+ Sbjct: 449 FAAELAISNRRLAHAAMTDLLTNLPNRRSGMNALAKAWAASSRFEQPLSVMMLDIDHFKR 508 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 +ND+ GH VGD V++ V I +S R DD + R+GGEEF V+ + D + A AER+R Sbjct: 509 INDSHGHAVGDTVLRDVAQAIQQSARKDDSMCRMGGEEFLVICPNTDLKAAVQAAERLRR 568 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VERL E I + ++SIG + + + AD ALY AK+ GRN+ V Sbjct: 569 MVERLRIQAGETEI--QTSVSIGVATREVGMTETDALVNAADRALYRAKQAGRNRSCV 624 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 3/184 (1%) Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFK 323 + + + + +A D LT ++NR F L V+ +Q+ P ++++DIDHFK Sbjct: 250 LMANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFK 309 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 ++NDT+GH GD + V ++ + +RP D++ R GGEEFGV+L + + +AERIR Sbjct: 310 RLNDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIR 369 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + + P +T S+G ++A + + AD ALY AK GRN+V Sbjct: 370 LAIAEKSVVLPSQQ-HIDMTASLGVATYPDHADCKERLVKQADQALYTAKYQGRNRVHSA 428 Query: 444 DVVN 447 +V Sbjct: 429 EVNE 432 >UniRef50_A9FTP6 Glutamyl-tRNA synthetase n=3 Tax=Rhodobacteraceae RepID=A9FTP6_9RHOB Length = 511 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 3/178 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + + RDPLT ++NR YF EL V A + + V+ D D FK NDT GH G Sbjct: 329 ELHDQSTRDPLTGVYNRRYFLGELRNAVALADRRASQLGVLSFDADRFKTFNDTHGHDAG 388 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ + + + + R ++ R+GGEEF V L D D E+ + E +R +E +T Sbjct: 389 DMVLRAIGDTLKELFRNGEVCCRMGGEEFAVFLPDTDKEQTMEVGEALRAAIEDITLRYG 448 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 +P +VTISIG E+ L P ++ AD ALY AK+ GRN VV + + P Sbjct: 449 SGTLP-RVTISIGVASYPEDGLLPQDLMHAADRALYAAKDAGRNCVVDCQKADPAKGP 505 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 3/243 (1%) Query: 213 FNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIF 272 + + + ++ I+L + T R + + L + I + Sbjct: 473 RTRFKSKSLICLPLKLKYKIIGVINLSDKKNLTPFTEADLRVLTSFANLASLTIERTEVL 532 Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWG 330 + ++ D LT ++NR + + L + Q V+ +D+D FK ND G Sbjct: 533 EESERFEQLSVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFNDLCG 592 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+ +K +II S+R D++AR GGEEF +L A +AERIR +E+ Sbjct: 593 HLAGDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEIEKEK 652 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD-VVNFC 449 + ++T S+G E+ + +D ALYEAK +GRN++V V + Sbjct: 653 FPGEKDIPQMRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNRIVAARTVPSAV 712 Query: 450 ESP 452 E P Sbjct: 713 EQP 715 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 6/215 (2%) Query: 231 AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNI 290 +++ + L S Y + S L ++ + A + + +A RDPLT I Sbjct: 89 SIIRALDLGAHDFVSKPIEYPVLAARMRSALR-LIQAKRDLEKANKELERLATRDPLTGI 147 Query: 291 FNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 NR FF + ++++D DHFK +NDT+GH GD+ + T+ I + Sbjct: 148 NNRRSFFKLAEAELTKTIRHGRDIALLMLDADHFKMINDTYGHAAGDEALLTITEICQNA 207 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 R D+LAR+GGEEF + D + E A A+AERIR+ E ++ + +T+SIG Sbjct: 208 CRESDILARLGGEEFAICCPDTNLEGAYAVAERIRQQCENTVIEHNSASFG--ITLSIGI 265 Query: 409 VVT-QENALNPNEIYRLADNALYEAKETGRNKVVV 442 + E+ + ADN LY+AKE GRN+ + Sbjct: 266 TTFVPSQDKSITEMLQRADNLLYQAKEMGRNRSIA 300 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKT 310 R V++ + + + L + RD LT +FNR Y L + A + Sbjct: 1151 RLALTVAEHLALSLANLKLRETL---SQQSIRDALTGLFNRRYMEESLEREIHRAQRHQR 1207 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P ++++DIDHFK NDT+GH GD V++ + + +SIR D+ R GGEE ++L D Sbjct: 1208 PMGIIMLDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRASDIACRYGGEELMLILPDA 1267 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 K AE+IR +V+ L + + + + IS+G E+ E+ AD ALY Sbjct: 1268 SLADTKQRAEQIRHDVKGLQIEY-HHKLLDAIAISVGVAAFAEHGSTAQELIAAADRALY 1326 Query: 431 EAKETGRNKVVVRD 444 +AK GR++VV Sbjct: 1327 QAKAQGRDRVVTAS 1340 >UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7E0_AZOSB Length = 471 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 13/232 (5%) Query: 219 DIW---NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTV----MVIFMCHI 271 IW + V F + + + F + + ST + E++ +L V + + Sbjct: 239 HIWWLAHAVFASGFLLLSFGVVRAFHTTRAFSTVFSQE--EMMRQLYVEKERAESALALL 296 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTW 329 A + +A DPLT NR F L + A ++ P ++ +DIDHFK +ND Sbjct: 297 RQANADLRRLAATDPLTGASNRRQFMATLASEWARARRERAPLALLALDIDHFKHINDRH 356 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GHP GD +KT V+ +RP D++ R+GGEEF ++L A +AERIR VE L Sbjct: 357 GHPAGDHALKTFVSAAAGLLRPGDVIGRIGGEEFAIVLPGTQAADAHGIAERIRHGVEAL 416 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 D +P +T+S+G V+ + P ++ + AD LYEAK GRN+V Sbjct: 417 ALDID--GVPVALTVSVGVAVSGPSCTEPGDLLKEADRRLYEAKNAGRNRVC 466 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 5/170 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVG 334 K A D LT I NR F L + Q+ P ++++DIDHFK +NDT+GH VG Sbjct: 314 QVKVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLVG 373 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ V ++ +++R D AR GGEEF ++L E+++ LAER+R + + Sbjct: 374 DHVLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARFVHD 433 Query: 395 EYAIPQKVTISIGAVVTQENALNP-NEIYRLADNALYEAKETGRNKVVVR 443 + P +T+SIGA AL+ ++ AD ALY+AK GRN+V Sbjct: 434 GH--PFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVCTA 481 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 3/169 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVG 334 AH D LT + NR +F + + + +Q+ + +MDID FKK+ND+ GH +G Sbjct: 380 ELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAMFMMDIDFFKKINDSHGHKIG 439 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V+K + ++ +++R D++ R+GGEEF +LL + + A +AER+R V Sbjct: 440 DIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAEALEVAERLRLAVADSKVPMK 499 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + +P + T+SIG N + + AD ALY+AK++GRN+V Sbjct: 500 D-GLPVQYTVSIGVSSVASADDNIDMLLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_Q8D4A5 FOG: GGDEF domain n=3 Tax=Vibrio vulnificus RepID=Q8D4A5_VIBVU Length = 357 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 4/198 (2%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQSASA 307 Y V+ L V H + +AH DPLT NR F Sbjct: 159 YSELDARVLETLANWVAAQVHKHQQINKMIELAHIDPLTGALNRRAFVEATYFINDKPRH 218 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 ++++D+D FK++ND +GHP GD+V+ + + K IR DDLLAR GGEEF +LL Sbjct: 219 YDHHTALLMIDLDKFKEINDQFGHPAGDKVLMQIAATLKKQIRSDDLLARFGGEEFAILL 278 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 ++ E A LAE +R VE+LT ++ ++ I + T+SIG + E+ +LADN Sbjct: 279 HHVNAEEAMTLAETLRVTVEQLTIEHHQHRI--QCTVSIGIALPSSPNQGFEELMQLADN 336 Query: 428 ALYEAKETGRNKVVVRDV 445 ALY AK +GRN++++ D+ Sbjct: 337 ALYVAKRSGRNQIILSDM 354 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 8/186 (4%) Query: 260 KLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIM 317 +TV + + + + A D LT IFNR F L ++ A + +++ Sbjct: 250 DITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSLILF 309 Query: 318 DIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKA 377 DIDHFK+VND++GH GD V+K + ++ ++R D+ AR GGEEF + + E A Sbjct: 310 DIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLESAIK 369 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGR 437 LAE++R +E P+K+T+S G + + + + AD ALY AKE GR Sbjct: 370 LAEKLRSKIENYVFPA-----PKKITVSFGVATFRSSDNDI-TLVNRADEALYRAKEGGR 423 Query: 438 NKVVVR 443 N+VV Sbjct: 424 NQVVSH 429 >UniRef50_B5JSY0 Response regulator PleD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSY0_9GAMM Length = 261 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 75/250 (30%), Positives = 123/250 (49%), Gaps = 10/250 (4%) Query: 207 LSVNLYFNGLRYDIWNGVTVIAFCAVL---YNISLLFMSRYSVSTWYISRTIEVVSKLTV 263 N+ L + +G TV ++ + I + ++V I + Sbjct: 8 YGANVATTLLMTAVVSGSTVCCALGLILLGFPIGGKVWN-FAVPAALIIPFFVGTPLVHN 66 Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDH 321 ++ + + + +A++D LT ++NR YFF+ + + ++++D+DH Sbjct: 67 LIKSNIKLLRVQKQLEELANKDALTGLYNRQYFFDHANEWDKRCRENSGHFSLLMLDVDH 126 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK +ND +GHPVGD+V++ V N+I +R +D+ AR GGEEF LL D + AKA+AER Sbjct: 127 FKSINDRFGHPVGDRVLQRVSNVIKGFMRQEDMCARYGGEEFICLLPDTNAAGAKAVAER 186 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IR +E A +++SIGA N N + AD ALYEAK+ GRN+ V Sbjct: 187 IRLGMEHQAFL---KARGLSLSVSIGATTMSAND-NLETLIERADQALYEAKDGGRNRAV 242 Query: 442 VRDVVNFCES 451 + + S Sbjct: 243 FKAADDTEPS 252 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 7/190 (3%) Query: 263 VMVIFMCHIFSALRVTKNI---AHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIM 317 V++ I R+ + + A DPLT I NR FF + + A P V+++ Sbjct: 793 VVLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLML 852 Query: 318 DIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKA 377 D+D FK+VND +GH GD V+ V +++R D+L R+GGEEF +L + D + A A Sbjct: 853 DLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALA 912 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGR 437 AER+R VE + D P + T+SIG + ++I R AD+ALY AKE GR Sbjct: 913 AAERLRRAVEEM--DVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGR 970 Query: 438 NKVVVRDVVN 447 N+V++ VN Sbjct: 971 NRVMLARAVN 980 >UniRef50_Q2RNW0 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNW0_RHORT Length = 360 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 6/248 (2%) Query: 200 IFMWLTLL-SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVV 258 +F W L + + G R + + V I + S + Sbjct: 114 VFSWAVLFPVLPFFVLGQRLGLLVSIVFATTATVGVTILAVLDGAQGFSWIAPFNLAGAL 173 Query: 259 SKLTVMVIFMCHIFS-ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVM 315 + TV+ F + A R + +A DPLT + NR + + + P ++ Sbjct: 174 AGCTVLAYFYEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLL 233 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++D+DHFK +ND +GH GD V+ V ++I IR +DL+AR+GGEEF +LL D D A Sbjct: 234 VLDLDHFKSINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGA 293 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 + +AE+IR+ +E P ++ VT+SIG + ++ AD+ LY+AK+ Sbjct: 294 REVAEKIRKAIESTALIGPGGSL--SVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKA 351 Query: 436 GRNKVVVR 443 GRN+V Sbjct: 352 GRNRVSAA 359 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 2/193 (1%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKT 310 + + + L ++I + + ++ D LT ++NR + N L + Q Sbjct: 484 QVLTSFANLASLMIERTEVLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRSIRQGL 543 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 V+ +D+D FK ND GH GD ++ II S+R D++AR GGEEF +L Sbjct: 544 NLTVIFIDLDFFKNYNDLCGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCAVLPGT 603 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 A +AERIR +ER ++T S+G E+ + +D ALY Sbjct: 604 SKVEAMIVAERIRSEIEREKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHASDVALY 663 Query: 431 EAKETGRNKVVVR 443 EAK GRN++V Sbjct: 664 EAKAGGRNRIVAA 676 >UniRef50_C6MLA7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLA7_9DELT Length = 319 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 5/208 (2%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 ++ R + +++ E++ +LT + A R K +A RD LT+++N Sbjct: 107 DLISAVAGRAAEKARLVAQNRELLEQLTKA---NEELQEANRALKEMAIRDGLTSLYNHR 163 Query: 295 YFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 YF L + + C++ D+D+FK+ NDT GHP GD+++K + II R Sbjct: 164 YFQEALAREVVRSKRYDKRCCLVFFDVDNFKQYNDTHGHPEGDRLLKGLARIIMLRSRGC 223 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 DL AR GGEEF +LL + E A +AE +R V E VT+SIG Sbjct: 224 DLAARYGGEEFVLLLPETGKEAALTVAEDMRVRVAEHPFAGRETQPLGTVTVSIGVACFP 283 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKV 440 E+ + + AD LY+AK +G+N+V Sbjct: 284 EDGSDAATLLCCADQLLYQAKNSGKNRV 311 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 6/187 (3%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFF--NELTVQSASAQKTPYCVMIMD 318 +T +++ + + + +A DPLT + NR F V+ A P V+++D Sbjct: 276 VTGVMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVVMID 335 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD-DLLARVGGEEFGVLLTDIDTERAKA 377 +DHFK VND +GH +GD V++ V + ++R D+ AR GGEEF +LL + A+ Sbjct: 336 VDHFKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSGAQQ 395 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETG 436 LAERIR ER + + A+ + T S G V + + + + + AD+ALY AKE G Sbjct: 396 LAERIRVAFERTAVETEQGAV--RFTASFGVDVFRSDMDTGIDTVLKRADDALYRAKEAG 453 Query: 437 RNKVVVR 443 RN+V + Sbjct: 454 RNRVQLA 460 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 4/173 (2%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 A + +A D LT + NR +F ++ +++MDID+FK VND +G Sbjct: 600 EAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMDIDYFKTVNDMYG 659 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD V+K + K +R D+ R+GGEEF +LL D + A +AER+R +E Sbjct: 660 HDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLVAERLRAEIETTK 719 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + ++ +T+SIG E+ ++ + AD LY AKE GRN+V V+ Sbjct: 720 MNTRSGSL--NITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRNQVKVQ 770 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 8/224 (3%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 W GV +I+ V + L +S + R + + Sbjct: 1547 WLGVPLISESRVAGVVVLTS----QISGAFGEREAGIAFTFAGQAGVAIENARLFAEVQR 1602 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A D LT +NR + + + AQ+ P +I+DID FK+VND GH VGD+V+ Sbjct: 1603 LAVTDDLTGTYNRRHLLTTAERELSRAQRFNRPLAAIILDIDEFKRVNDAHGHAVGDEVL 1662 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 + V + + +R D+L R GGEEF ++L + D A +AER+R ++ Sbjct: 1663 RAVADRLRSGLREVDVLGRYGGEEFVIILPETDLISAYQIAERLRNSIAAEPIAT--STG 1720 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 P VTIS+G + + D+ LY AK GRN+VVV Sbjct: 1721 PVSVTISLGVAAADPTTPDFASLLSRIDDLLYTAKRRGRNRVVV 1764 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 6/196 (3%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCV 314 + + +T + K RD LT ++NR Y L ++ A ++ + Sbjct: 300 LATNVTRHISLALANIKLCETLKQQNIRDALTGLYNRRYLEESLKKELERAKRKERSLGI 359 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++D+DHFK VNDT+GH GDQV+K + + + IR D+ R GGEE ++L + E Sbjct: 360 IMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRGSDIACRYGGEELTLILPEASLEN 419 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 + AE++R+ V+ L D ++ +TIS+G E+ + + + AD ALY+AK+ Sbjct: 420 TRQRAEQLRQAVKNLDLDLCDHT----LTISVGIACFPEHGYSGKALLKTADQALYQAKQ 475 Query: 435 TGRNKVVVRDVVNFCE 450 GR++V+ +++ + Sbjct: 476 QGRDRVICPPILDIED 491 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 5/170 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 K A D LT I NR F L ++ + ++++DIDHFK +ND +GH VG Sbjct: 314 QVKIRADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLVG 373 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ V +I+ +++R D AR GGEEF V+L E+A+ LAER+R + + Sbjct: 374 DHVLREVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARFVHD 433 Query: 395 EYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETGRNKVVVR 443 +T+SIG Q AL ++ AD ALY+AK GRN+V Sbjct: 434 GEDF--SITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVCTS 481 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 10/210 (4%) Query: 238 LLFMSRYSVSTW--YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 L + RY V +SR +T + + A K A+ D LT + NR+Y Sbjct: 64 WLHVHRYQVPDEDGRVSRVAGTAVDITDLKQVELELQRANAELKRQAYYDRLTGVANRHY 123 Query: 296 FFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 F L + A A + P+ +++ D+DHFK+VNDT+GH GD V++ V +I + +R D Sbjct: 124 FETLLNRELARADRYGAPFALVMFDLDHFKRVNDTFGHAAGDVVLQEVTRVIAERLRDAD 183 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 +L R GGEEF VLL A +AE +R VE ++ +VTIS+G Sbjct: 184 VLGRWGGEEFMVLLPGTQEADAARVAETMRARVEGH-----DFPEAGRVTISLGVAAFCA 238 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVR 443 + R D ALY AK GRN+V V Sbjct: 239 GEPRTG-LLRRVDEALYRAKGEGRNRVAVA 267 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 24/330 (7%) Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISL-FFVFGGPIVAH-----ILSSHYES 174 + + +L + + ++ K+ I + FFV ++A+ + S Sbjct: 68 IVILVLAACCGIGFILGFKADATAWTSKLYAHICIQFFVAVNMVLAYYAGVFSVVSGVAL 127 Query: 175 YNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLY 234 + N +VV+ + + + L +LS NG L+ Sbjct: 128 VGGSLTGFILFNERVVYGGLFTGALATLALIILSALEVIPYASVIETNGTP-------LH 180 Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 + + + +ST YI + + S + + ++ DPLT + NR Sbjct: 181 HNATWLILLLGLSTPYIGLLVAMNSS------AIRRWRQRESEVRQLSTTDPLTQVANRR 234 Query: 295 YFFNELTVQSASAQKT---PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 + L ++ + +++ +++MD+DHFK +ND GH GD+ ++ ++ + R Sbjct: 235 HLLERLNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRN 294 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 DL+ R GGEEF +LL D + A +AER R+ +E+ D + + +T SIG Sbjct: 295 TDLVGRYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEV-LHITTSIGLATY 353 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVV 441 Q N + AD ALY+AKE GRN++V Sbjct: 354 QMGDTN-ESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_Q48M78 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Proteobacteria RepID=Q48M78_PSE14 Length = 459 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 106/214 (49%), Gaps = 15/214 (7%) Query: 243 RYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL-------RVTKNIAHRDPLTNIFNRNY 295 R S +Y +I + L + I + + IAH DPLT + NR Sbjct: 249 RKDGSLFYAEHSISPLCNLEGTITHYVSISQDVTTRLGREQKLLEIAHSDPLTGLNNRRA 308 Query: 296 FFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 + L + +A P+ ++I DIDHFK VND +GHP GD+V+ +V I+ + IR D Sbjct: 309 AEHTLERLIDTARISGKPFSLIIGDIDHFKSVNDRYGHPAGDRVLTSVAVILKQRIRLQD 368 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 + AR GGEEF +L+ D + A LA+RIR+ VE L N VTIS+G Sbjct: 369 VAARWGGEEFLILVPDSSLDHAAELADRIRKGVEDLLIPN-----TGSVTISLGVAQLSP 423 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 + + AD ALY+AK GRN+V + + Sbjct: 424 -GETAASLIQRADKALYQAKRRGRNRVDIAQADD 456 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 116/210 (55%), Gaps = 6/210 (2%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 + L S + + VS+ + + + +L K + +D LT+++NR Sbjct: 867 GLFYLSASEPDKLSEVKQQLARAVSEHISLALVNLQLRESL---KAQSIKDSLTDLYNRR 923 Query: 295 YFFNELTVQSASAQKTPYCV--MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 Y L + + AQ+ + V +++D+DHFK+ NDT+GH GD V++ V N + ++R Sbjct: 924 YMEESLKREISLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRSG 983 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 D+ R GGEEF ++L + ++ AE+IR+ +++L + + + VT+S+G Sbjct: 984 DIACRYGGEEFLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSF-RSVTVSVGVASFP 1042 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVV 442 ++ N +++ + AD ALY+AK+ GR++VVV Sbjct: 1043 DHGTNNDQLIQAADTALYQAKKQGRDRVVV 1072 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 3/170 (1%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPV 333 K A D LT + NR YF + + TP ++DID FK+VNDT+GH Sbjct: 421 EELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFMLDIDLFKQVNDTYGHKS 480 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD V+K + ++ +++R D++ RVGGEEF +LL + D +A +AER+R + Sbjct: 481 GDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAEVAERLRSVLADEKVPT 540 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 E P + T+SIG + N + + LAD ALY+AK+ GRN+V + Sbjct: 541 -EAGAPIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGRNRVYIA 589 >UniRef50_B4RZE8 GGDEF domain protein n=2 Tax=Alteromonadales RepID=B4RZE8_ALTMD Length = 325 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 4/196 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQ 308 + R +V +T + + + K + D LT +FNR Y+ + + Sbjct: 128 VERFCMLVYDVTEQALGKLGMEHLNQELKTASRVDGLTGLFNRRYWQERFDEMYKLCVRR 187 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P +++DIDHFK++NDT+GH GD+VIK + +I + +R DL R GGEEF ++L Sbjct: 188 DKPSTAVMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILN 247 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D E A+ +AERIR+ +RL ++ +I T+S+G P AD A Sbjct: 248 DSTVEDARIVAERIRQLAQRLVVEHEGESI--NFTVSLGLAQFCSAFKGPLAWLECADKA 305 Query: 429 LYEAKETGRNKVVVRD 444 LY+AKE+GRN+ V D Sbjct: 306 LYDAKESGRNQYRVYD 321 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 9/205 (4%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK 309 Y E++ ++ V + + A D LT + N F L A +++ Sbjct: 555 YPPAAREMLRVISHQVGVSMQNARMYQSMEERATTDGLTGLTNHRAFQERLEQLHALSER 614 Query: 310 T--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 T + +++ DIDHFK VNDT+GHPVGD V+K V I + R D++AR GGEEF ++L Sbjct: 615 TGQKFSIILTDIDHFKSVNDTYGHPVGDAVLKRVAAIFTRRARKVDIVARYGGEEFVLVL 674 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 D D E A A R+RE + T + + VT+S+G ++ +E+ LAD Sbjct: 675 PDTDAEGAAVFANRLREEIAAQTITSDNGSF--SVTLSLGVAEFPRDSTKRHELIELADQ 732 Query: 428 ALYEAKETGRNKVVVRDVVNFCESP 452 ALY KE GRN+V C+ P Sbjct: 733 ALYYCKEHGRNRVT-----KVCDLP 752 >UniRef50_C6BU46 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU46_DESAD Length = 490 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 67/172 (38%), Positives = 98/172 (56%), Gaps = 5/172 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVG 334 K A+RD LT ++NR F L + Q+ T ++++D+D+FK VNDT+GH G Sbjct: 314 KIKTRANRDGLTRVYNRRSFDERLVEEFKRHQRLNTELSLLMVDLDYFKAVNDTYGHMAG 373 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ V + K+ R D +AR GGEEF +LL ++A+ LAERIR +E Sbjct: 374 DMVLEKVARMFEKTFRSTDFIARYGGEEFVILLPHTREDQAEMLAERIRAKIESCAMTYQ 433 Query: 395 EYAIPQKVTISIGAVVTQENALNPN-EIYRLADNALYEAKETGRNKVVVRDV 445 + + +T SIG + +L + EI R AD ALY+AK GRN+VVV + Sbjct: 434 DKSF--NITASIGVSSVRPGSLEKDTEIVRKADEALYDAKMQGRNRVVVSPM 483 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTK----NIAHRDPLTNIFNRNYFFNELTVQSA 305 ++S V + V++ C I+ A + IA DPLT ++NR F ++ + Sbjct: 190 WLSALAIVAGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGLYNRRAFDECCDIEFS 249 Query: 306 SAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 AQ++ P+ +++ D+DHFK+VND +GH VGD+V++ N + + IR D++AR GGEEF Sbjct: 250 RAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEHIRKHDVVARFGGEEF 309 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 +LL DTE+ +AE++R + + ++ S G + + + Sbjct: 310 VLLLPGKDTEQGLEVAEKLRAKTADTQITIGD-DVCLTLSASFGVAHYDSSDREWSAVLH 368 Query: 424 LADNALYEAKETGRNKVV 441 ADNALY AK+ GRN+VV Sbjct: 369 RADNALYAAKKQGRNRVV 386 >UniRef50_B1X1R3 Putative adenylate cyclase n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X1R3_CYAA5 Length = 592 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 81/273 (29%), Positives = 121/273 (44%), Gaps = 36/273 (13%) Query: 190 VWKASYVTIMIFMWLTL----------------LSVNLYFNGLRYDIWNGVTVIAFCAVL 233 VW + IF W T+ SV + + D W G+ + + VL Sbjct: 328 VWSNPLEWLWIFAWTTIGMLVTYVVLNKHSFQYNSVIKWILFILNDCWLGLLLFSCSYVL 387 Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 + + W++ + L VI M K +A D LT + NR Sbjct: 388 F-----------LQGWWVPTITPFMVVLGASVIIMVD------KWKYLATFDTLTKVPNR 430 Query: 294 NYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 YF L + +++ D+DHFK+ NDT+GHP GD+ ++ V I +IR Sbjct: 431 LYFDKILEQTRLLHHLSRKQTSLILCDVDHFKQYNDTYGHPAGDRCLQKVAKEIRTAIRR 490 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV- 410 D +AR GGEEF ++L D + AK +A+RI E V L + VTIS G Sbjct: 491 TDFVARYGGEEFAIILPRTDRQEAKKIAQRILEKVISLNISHNTSLTSDYVTISCGISSL 550 Query: 411 TQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 ++ L+ + AD ALY+AK+ GRN+V+V Sbjct: 551 FLQDQLSTKRLINQADKALYQAKQEGRNRVIVY 583 >UniRef50_A5IAA0 Sensor histidine kinase n=5 Tax=Legionella pneumophila RepID=A5IAA0_LEGPC Length = 714 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 129/244 (52%), Gaps = 10/244 (4%) Query: 207 LSVNLYFNGLRYDIWNGVTVIAFCAVLY-NISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 +S +L L + +LY ++L + + + + I ++LT + Sbjct: 477 VSFSLEQQDLSLLCVPLMAQNDIYGLLYLEVNLKQLPLFDENQRLL---ITAFAELTALA 533 Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFK 323 + + +LR + RDPLT ++NR Y + L Q A++T + ++++D+DHFK Sbjct: 534 LANVRLGESLRY---QSIRDPLTGLYNRRYLEDFLFKQLHQAERTKASFAILMLDLDHFK 590 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 K+NDT+GH GD V+K + I+ IR D+ R GGEEF +LL D+D AK A+ +R Sbjct: 591 KINDTFGHEAGDFVLKEIGQILNNDIRLGDVATRYGGEEFVLLLFDVDANAAKTRADNLR 650 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + +L + +VT SIG + ++A +P+E+ AD ALY+AK GRN V++ Sbjct: 651 SAISKLQVKYGAQYVG-QVTASIGISIYPDDAKSPDELIEAADKALYQAKNKGRNMVLLF 709 Query: 444 DVVN 447 ++ Sbjct: 710 SEIS 713 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 9/219 (4%) Query: 230 CAVLYNISLLFMSRYSVSTWYISR--TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPL 287 A + LL+++ +V + S+ E VSK + + L + + RDPL Sbjct: 449 IAHGETLGLLYLNLSNVELFNPSQQHLAEAVSKQIAIAFANLKLRETL---EEQSLRDPL 505 Query: 288 TNIFNRNYFFNELTVQSA---SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNI 344 T +FNR Y + + Q ++++DIDHFK+ ND +GH GD V++TV N Sbjct: 506 TGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFGHEAGDLVLQTVANC 565 Query: 345 IGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTI 404 + IR D+ R GGEEF ++L + AE+IRE++++L + + +T Sbjct: 566 LQNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQLKIEYKSQPLD-SITA 624 Query: 405 SIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 S G +N +E++ AD ALY+AK+ GR++VV Sbjct: 625 SFGVAAFPQNGTTLHELFIDADKALYQAKKQGRDRVVCA 663 >UniRef50_Q726K1 GGDEF domain protein n=3 Tax=Desulfovibrio vulgaris RepID=Q726K1_DESVH Length = 655 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 13/268 (4%) Query: 188 QVVWKASYVTI----MIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSR 243 +W A +V M+ L LLS N+ NG+ ++ V + F A + + M Sbjct: 233 LSIWSAFFVEGAAIHMLMPLLVLLSCNVRINGVMVVLFLTVIAV-FIATAHRVGPFHMPT 291 Query: 244 YSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL----RVTKNIAHRDPLTNIFNRNYFFNE 299 + + + T+ + H+ + + + A DPLT + NR F Sbjct: 292 QGEAVMLLVSFAASTTLTTLGLSLYRHLLAQAGARATMWEQRAGIDPLTGLCNRARFDEV 351 Query: 300 L--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLA 356 L +Q Q +P +M+ D DHFK ND +GH GD +K V ++ R D++A Sbjct: 352 LLAELQRLQRQDSPLSLMMFDADHFKPYNDMYGHVAGDACLKRVAGVLRAVAHRASDVVA 411 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NA 415 R GGEEF +L D + A ALAE++R+ V L + + +T+S G V + Sbjct: 412 RYGGEEFVCILPGTDRDSAYALAEKVRQGVRALAIPHVGSPVAGVLTVSAGVVTVHGCDG 471 Query: 416 LNPNEIYRLADNALYEAKETGRNKVVVR 443 L+P E+ D ALY+AK GR++V+V Sbjct: 472 LDPQEVVAQVDRALYQAKGAGRDRVMVA 499 >UniRef50_A1TXI5 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXI5_MARAV Length = 523 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 3/197 (1%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQ 308 I+R I V + + + + ++ D LT + NR YF + ++ Sbjct: 328 IARVISWVYQSVEKIGITLSGLALRAELQRFSYEDSLTGLKNRRYFDELFRHEREVSARS 387 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P C++I DIDHFK ND GH GDQ ++ V +++ R D + R GGEEF VL+ Sbjct: 388 DRPLCLLIFDIDHFKLFNDCHGHEAGDQALRMVGDVLATCFRGSDTVCRYGGEEFSVLMP 447 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + A+ AE++R + ++ + +TIS G +EN +E++R AD A Sbjct: 448 GASLDEARQRAEQLRAAISAEPVEHRGENL-GSLTISAGIACWRENCPEFDELFRAADQA 506 Query: 429 LYEAKETGRNKVVVRDV 445 LY+AKETGRN+VV + Sbjct: 507 LYQAKETGRNRVVAASL 523 >UniRef50_C3KAX1 Putative GGDEF domain signalling protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KAX1_PSEFS Length = 388 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 18/260 (6%) Query: 197 TIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF----------MSRYSV 246 ++ ++ +SV+ Y + + +A + + LLF ++ Sbjct: 135 QALVMLFTVGMSVSAVSCYSAYR-YMTLASLALVLLPCTLWLLFQPSSMQVGVAIAVLVF 193 Query: 247 STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QS 304 ST+ +S T ++ L + A ++ A D LT + NR FF V + Sbjct: 194 STFVVSATRKLSDALEKAFRLTRQMERAHTISTRAAQTDELTGLMNRRAFFEHAQVLYEQ 253 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 + P C ++MD+DHFK++NDT+GH GDQV++ + +I S R D+ R+GGEEF Sbjct: 254 CRHNRQPLCALMMDMDHFKQINDTYGHQAGDQVLRQIGGVISASFRQADVYGRLGGEEFA 313 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 VLL + + A+ +AE++ + + L + ++ S+G T + + + Sbjct: 314 VLLPNTSLDTARTIAEQLVKAISGLASE-----PVHGLSASLGVASTHTQDQDLHGLMNT 368 Query: 425 ADNALYEAKETGRNKVVVRD 444 AD ALY AK GRN+V V + Sbjct: 369 ADKALYRAKAQGRNQVAVAE 388 >UniRef50_Q21FP0 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FP0_SACD2 Length = 498 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 8/190 (4%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDH 321 + I R + +A RDPLT+ +NR L + A AQ + +++DIDH Sbjct: 312 LAAIQGAIEDKNRKLEYLASRDPLTDCYNRRAMRERLDDEFAKAQNSGKDLVCIMLDIDH 371 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK+VNDT+GH VGD VIK V ++ +++R D++AR GGEEF V+L + E+ K +A+R Sbjct: 372 FKRVNDTYGHGVGDVVIKMVAQVVKEAVRDSDIVARFGGEEFCVVLPNATVEQVKIIAKR 431 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 R +E + KVT S G A +PN++ AD ALY +K+ GRN V Sbjct: 432 CRMTIET------QNCGGVKVTSSFGIAALSLGAKSPNDLIHQADEALYNSKQNGRNMVS 485 Query: 442 VRDVVNFCES 451 V ES Sbjct: 486 VWQPSMVIES 495 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 3/185 (1%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMD 318 + ++ + + R + +A D LT FNR +F ++ A+ P ++++D Sbjct: 390 VIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLD 449 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 +D+FK +ND GH GD ++ +V + ++R D++ R+GGEEF VLL + A Sbjct: 450 VDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALIT 509 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 AER+R V L D P+ T+SIG + + + AD ALY AK+ GRN Sbjct: 510 AERLRAQVADLRLDLPDGG-QLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGRN 568 Query: 439 KVVVR 443 +V Sbjct: 569 RVCAE 573 >UniRef50_A4BRN6 Putative signal transduction protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRN6_9GAMM Length = 504 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 107/198 (54%), Gaps = 8/198 (4%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKT 310 R ++++ + + + +A RDPLT +NR YF L+ ++A+ + Sbjct: 309 RYLQLLQHASEADRKASELERTAVQLQEMARRDPLTGAYNRRYFDEMLSQRFEAATRHQQ 368 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P + +D+DHFK VND +GH GD V+ V I +R DD LAR GGEEF +LL + Sbjct: 369 PLSLGFLDLDHFKMVNDRYGHQAGDVVLAGVAKAISSRLRGDDFLARYGGEEFVLLLPNT 428 Query: 371 DTERAKALAERIRENVE-RLTGDNPEYAIPQKVTISIGAVVTQENAL---NPNEIYRLAD 426 + E A+ + ERIR ++E PE+ I ++T+S GA + + +++ R AD Sbjct: 429 NLELAQRILERIRAHIETEEHTVAPEHMI--RITLSAGAAAHMDGSRISNKLDDLIRAAD 486 Query: 427 NALYEAKETGRNKVVVRD 444 ALY AK GRN+V V + Sbjct: 487 RALYLAKRQGRNRVEVAE 504 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 4/170 (2%) Query: 278 TKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + A RD LT FNR Y L + + + P ++I+D+DHFK++NDT+GH GD Sbjct: 551 LREQAIRDSLTGCFNRRYLDETLERELSRSRREGYPLSLLILDLDHFKRINDTYGHMAGD 610 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 Q + + + IR +D+L R GGEEF +L+ + A AE R + + Sbjct: 611 QALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMPLAIAAERAELWRSKIAEIRVTFGN 670 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 + + T S G ++ P+E+ + AD ALY AK GRN+VVV Sbjct: 671 FEL--SFTASAGVAAYPDHGKMPDELTQAADQALYTAKNEGRNRVVVYSA 718 >UniRef50_A3Y9Q2 Probable sensory transduction system regulatory protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9Q2_9GAMM Length = 549 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 78/228 (34%), Positives = 117/228 (51%), Gaps = 8/228 (3%) Query: 224 VTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCH-----IFSALRVT 278 VT F VL I LL M + W+ R + + K + + A Sbjct: 316 VTRFVFLCVLAVIILLIMGLAFLPLWFKERERDTLKKHQKNLEKKVQDRTEQLEQANYKL 375 Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K ++ DPLT I NR + L + A A++T P +++ DID FKK ND +GH GD Sbjct: 376 KVLSELDPLTRIANRRLYNRTLIKEIAMAKRTSEPLSLLVFDIDDFKKYNDNYGHDNGDV 435 Query: 337 VIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 +++ V I+ SI R D +AR GGEEF +L D + A +AER+R N+E ++ Sbjct: 436 ILQEVAKILTNSITRTTDFVARYGGEEFVAILPATDEKGAFLVAERVRINIEAENLEHIH 495 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 ++ VT+S+G + L E+++ AD ALY+AKE GRN+V+ Sbjct: 496 SSVLPCVTVSVGIATLKGAQLCKKELFQQADLALYKAKEGGRNQVITY 543 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%) Query: 191 WKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWY 250 W I +L ++ + + L D + A + LF+S Sbjct: 311 WALRRGQPHIIEYLGRDALCAHIDELPSDASVTTACLPMSAQGTQLGFLFLSAAGPGPMP 370 Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 E ++ + + + +LR + RD LT ++NR Y L+ + A + Sbjct: 371 RLEIAEAAAEQLSLALSNLRLRESLR---RQSIRDALTGLYNRRYLEESLSHELARCARR 427 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P V+++D+DHFK+ ND+ GH GD ++ V ++ +R +D+ R GGEEF VLL Sbjct: 428 GLPLSVLMLDVDHFKQFNDSQGHAGGDLLLAAVGELLLTRLRTEDVACRYGGEEFTVLLP 487 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + D E A +AE+IR + L + A+P KVT SIG + + + AD A Sbjct: 488 EADGEEALRVAEQIRGYIAALAVSDEARALP-KVTASIGVASFPADGEQGASLIQKADAA 546 Query: 429 LYEAKETGRNKV 440 LY AK GRN+V Sbjct: 547 LYRAKHRGRNRV 558 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 11/215 (5%) Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMV-------IFMCHIFSALRVTKNIAHRDPLTN 289 LL + S ++ + + ++ +L V + + +A + +A D LT Sbjct: 665 GLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSVLYQQVQAANEELQRLATLDGLTQ 724 Query: 290 IFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 I NR F L + ++ P +++ D+D FK+ NDT+GH GD ++ + + + Sbjct: 725 IANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDTYGHLAGDDCLRQLGSALKS 784 Query: 348 SI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI 406 I RP DL+AR GGEEF V+L + + E A ++A+ IR+ V L + + ++ +VT+S+ Sbjct: 785 VIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVYDLIIPHAQSSVCDRVTVSL 844 Query: 407 GAVVTQENALN-PNEIYRLADNALYEAKETGRNKV 440 G N P ++ AD +LY AK+ GR++V Sbjct: 845 GVASIVPNCETSPQDLINAADKSLYIAKQQGRDRV 879 >UniRef50_A9B3D1 Diguanylate cyclase n=2 Tax=Bacteria RepID=A9B3D1_HERA2 Length = 1774 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 4/169 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + +A D LT + NR +FF Q + P M++D+DHFK+VND++GH VG Sbjct: 1608 QVQRLAITDSLTQVSNRRHFFELAERQWILTCSSDHPLSAMMLDVDHFKRVNDSYGHSVG 1667 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++TV ++ ++RP DLL R GGEEF +LL D D A +AER+R + ++ Sbjct: 1668 DLVLRTVADLCRANLRPSDLLGRYGGEEFAILLPDTDVSAALTIAERLRVAIANHVINHE 1727 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + +I +T+SIG ++ + + AD LY AKETGR++V + Sbjct: 1728 QASI--NLTVSIGVTGLSKDDNSVASLLDRADRGLYIAKETGRDRVTMA 1774 >UniRef50_A4SJ18 GGDEF domain protein n=3 Tax=Aeromonas RepID=A4SJ18_AERS4 Length = 626 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 98/183 (53%), Gaps = 4/183 (2%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDH 321 M + ++ + R + +A D LT I NR E+ + A P CV+I+DIDH Sbjct: 446 MGMLALYLLNRSRKLRQLAMTDELTGIHNRRQIQAKGEVLFRQARDNGKPLCVLILDIDH 505 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK+VNDT GH +GD+V+ V + IG +R D + R GGEEF VLL D E A +AER Sbjct: 506 FKQVNDTLGHHMGDRVLTAVASCIGAQMRHLDRVGRHGGEEFLVLLPDTRMEEALEVAER 565 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IR V RL + P V SIG + ++ + AD A+Y AK+ GRN+V+ Sbjct: 566 IRHEVSRLHIEEMPEGHPVHV--SIGCAECSLLDESLGDLIKRADEAMYRAKQAGRNQVM 623 Query: 442 VRD 444 + Sbjct: 624 WAE 626 >UniRef50_A1WTZ7 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Proteobacteria RepID=A1WTZ7_HALHL Length = 308 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%) Query: 269 CHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVN 326 + + ++ RD LT++ NR +L + + Q+ TP V++MDIDHFK N Sbjct: 128 VDLKRKTDALERLSQRDGLTDLPNRRVLDRQLPEEWSRCQRGDTPLSVIMMDIDHFKPYN 187 Query: 327 DTWGHPVGDQVIKTVVNIIGKS-IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 D +GH GD+ ++ V ++ R DL+AR GGEEF LL D A +AER R Sbjct: 188 DHYGHGAGDECLRRVARVLANVPSRTTDLVARYGGEEFIALLPYTDAPDAWQMAERFRAA 247 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQEN--ALNPNEIYRLADNALYEAKETGRNKVVVR 443 V L + + +T+S+G + +P ++ AD ALY AK+ GRN+V Sbjct: 248 VAALQLPHGHSSTDGIITMSVGVASHTADRPYDSPEQLLEAADQALYAAKKAGRNRVQAA 307 Query: 444 D 444 Sbjct: 308 Q 308 >UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NJD1_9DELT Length = 469 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPY 312 +E ++ +T V+ + + + K ++ D LT +FN+ YF L V+ A + P Sbjct: 281 VEHITDITSRVLAEQALQKSEQRYKELSIVDELTGLFNKRYFNKHLRLEVERARRYQHPL 340 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 ++IMDID+FK NDT+GHP GD+V+ + ++ S+R +DL R GGEEF V+L D Sbjct: 341 SLLIMDIDNFKHYNDTYGHPAGDRVLSALGGMLRDSMRLNDLACRFGGEEFVVILPMTDG 400 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 E LAER+RE L P + + T+S+G E+ +P + AD LY A Sbjct: 401 ETGLKLAERLRERFAALEFQ-PLEGVVIRKTMSVGVAQF-EDEESPESLLARADKNLYAA 458 Query: 433 KETGRNKVVVR 443 K GR++ ++R Sbjct: 459 KAAGRDRSILR 469 >UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARY2_PELPD Length = 355 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 5/192 (2%) Query: 258 VSKLTVMVIFMCHIFSALR---VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPY 312 +S++ V+ F + T +A D LT + NR YF L + A + P+ Sbjct: 160 ISQILVLASFAAISIENAKFHEETHQLAINDSLTGLNNRRYFDKVLPQEYERAHREGLPF 219 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 +M++D+D+FK NDT GH +GD+++ T+ ++ K++R D R GGEEF V+L + D Sbjct: 220 SLMMIDVDNFKLFNDTHGHHLGDRILATIGRVLRKTLRSIDFAFRYGGEEFVVILPETDL 279 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 E A +AERIR+ V + + VT+S+G +A + +AD LY+A Sbjct: 280 ESAHKVAERIRQRVMAESRKLLRNPQDRPVTVSVGISCYPRDAACSITLLAMADQLLYQA 339 Query: 433 KETGRNKVVVRD 444 K TGRN+V+V + Sbjct: 340 KRTGRNRVLVAE 351 >UniRef50_Q0ATH2 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Maricaulis maris MCS10 RepID=Q0ATH2_MARMM Length = 324 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 71/187 (37%), Positives = 97/187 (51%), Gaps = 5/187 (2%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVM 315 +++L + + + K +A D LT NR F L +Q A+ P V+ Sbjct: 121 MTELRARLRAASRLVRMQKQFKRLAETDALTGAANRRAFMQYLEIQSQRATRDDIPLSVV 180 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++D+DHFK VNDT GH GD V+ V I +R +D+L R+GGEEF V+L A Sbjct: 181 MIDLDHFKSVNDTHGHATGDTVLIEAVKSIQACLRDNDMLGRLGGEEFCVILPGAGLFSA 240 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL--NPNEIYRLADNALYEAK 433 ERIR VE +T E +P VT S+G + L P+ + + AD ALY AK Sbjct: 241 GIAGERIRAAVEAMTISTDE-GVPVPVTASLGVASLTDGDLISAPDTLLQTADVALYRAK 299 Query: 434 ETGRNKV 440 ETGRNKV Sbjct: 300 ETGRNKV 306 >UniRef50_Q02P32 Putative two-component response regulator n=6 Tax=Pseudomonas aeruginosa RepID=Q02P32_PSEAB Length = 525 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 3/172 (1%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + + +A D LT + NR+ F + EL +++A + P +++DIDHFK +ND+ GH Sbjct: 355 QELRLLASTDTLTGLHNRHSFLHQAELMLKAAERFRHPCVALMLDIDHFKNINDSHGHLT 414 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+ ++ V + + +R DLL R+GGEEF LL ++ ++A +AER+R VE L N Sbjct: 415 GDRALQRVAETLRQGLREVDLLGRLGGEEFAALLPEVSLDQALDVAERLRAGVEALRVSN 474 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 P+ P ++T+SIG + ++ + + AD+ALY+AK GRN+ Sbjct: 475 PD-GEPLRMTVSIGVALRRDAGDDLESLLVRADSALYQAKSGGRNRTEYAPA 525 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 4/180 (2%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKK 324 + + + + +A D LT + NR F L + + P V++ D+D FK Sbjct: 468 LHAKLQTVNQELERLASLDGLTGVANRRQFDLHLKREWQRLLRETAPISVIMCDVDFFKA 527 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 NDT+GH +GD+ +K + I+ R DL +R GGEEF ++L + + A +A++I+ Sbjct: 528 YNDTYGHQMGDECLKQIAKILENCAQRSTDLASRYGGEEFVIVLPNTGIKGALQVADKIQ 587 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + L ++ + + VT+S+G + +P + +LAD ALYEAK GRN ++ Sbjct: 588 HQIRALEIEHQKSEVSGYVTLSLGVACQVPNHDRSPESLIKLADAALYEAKSKGRNCIIA 647 >UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammaproteobacteria RepID=B3PIC1_CELJU Length = 322 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 4/189 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 ++ +T + A + +N++ D LT++FNR Y+ L + ++P + Sbjct: 134 IIYDVTDTAVNKIAQQHANKQLQNLSRTDHLTSLFNRGYWELRLIQEFKRYDRYESPSSL 193 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++DIDHFKK+ND +GH VGD+ I+ V +I + +R D+ R GGEEFG++LT + + Sbjct: 194 IMLDIDHFKKINDNYGHTVGDEAIRCVSRVIKEQVRDLDIAGRYGGEEFGIILTSTNGDG 253 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A +AER+R +E+ T + I TIS+G ++ + + AD+ALY++KE Sbjct: 254 ACVIAERLRSIIEKQTVYAEGHEI--HFTISLGVAELNDHMHDHRQWIEKADHALYKSKE 311 Query: 435 TGRNKVVVR 443 +GRN+ + Sbjct: 312 SGRNRCTLS 320 >UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ19_ACIBL Length = 369 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 10/252 (3%) Query: 202 MWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKL 261 W T L + + + L+ ++ S S E ++ Sbjct: 107 FWATRFGRPLLVTAGHNLLSDAALESLGARSALIVPLVVSNKVIGSMQLFSAEHESFTRE 166 Query: 262 TVMVIFMCHIFSALRVTKN--------IAHRDPLTNIFNRNYFFNELTVQ--SASAQKTP 311 + +M + + ++T++ A D LT + R YF +L ++ A ++TP Sbjct: 167 DAQLFWMLTLVAENQLTRDYENEGLIKFAFTDFLTGLKTRGYFEQQLELEIKRAERKRTP 226 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++++D+DHFK +NDT+GH VGDQV++ V ++ K +R D AR GGEEF ++L + + Sbjct: 227 IAMLMLDLDHFKTLNDTYGHHVGDQVLRDVSAVLMKDLREVDTAARYGGEEFVIVLPETN 286 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 T A +A RIR VE+ +++TISIG + ++A + E+ AD ALY+ Sbjct: 287 TTGAMQVANRIRRGVEQAKFFAGSPRQVERLTISIGIAIYDQDAQSKRELIEAADAALYQ 346 Query: 432 AKETGRNKVVVR 443 AK GRN+VV Sbjct: 347 AKGQGRNQVVTH 358 >UniRef50_A1TUA2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TUA2_ACIAC Length = 591 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 12/217 (5%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM----CHIFSALRVTKNIAHRDPLTNIF 291 ++ L S S++ + R E+ T + + + A + +N+A RDPLT ++ Sbjct: 375 VAQLNRSFQSMTASLLEREQELSRLNTSLENQVRERTLALHQANQELENLAVRDPLTGLY 434 Query: 292 NRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR F L +A + + +MI+D DHFK+VNDT GH GD V++ + +I + Sbjct: 435 NRRRFDEALQAYTARCRELGHRFALMIVDADHFKRVNDTHGHQTGDAVLRHLAGVITGCV 494 Query: 350 RPDDLLARVGGEEFGVLLTD-IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 R D +AR GGEEF VL+ + D E + +AE+IR V + + +T+SIG Sbjct: 495 RSTDFIARFGGEEFVVLMPEPRDREEGRFVAEKIRLAV-----GHTPFPGVGHLTVSIGL 549 Query: 409 VVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 I AD ALY+AKE GR++V V Sbjct: 550 AFCHGGGEPLATILERADKALYQAKEEGRDRVCVAPA 586 >UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5UZW7_ROSS1 Length = 797 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 11/256 (4%) Query: 189 VVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVST 248 VW+A +I + + + + G V+A +L +++ + +S + Sbjct: 541 PVWEAIERQRIIIRHRVVYAHAGEIKSIPSVL--GAPVVAGDRMLGVLAVYHLHDHSHFS 598 Query: 249 WYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSAS 306 +E+V + T + I +F+ T+ +A D LT +FNR +FF ++ A Sbjct: 599 ERDGAMLEIVGRQTGIAITNAQLFTE---TQRLATTDQLTGLFNRYHFFALAPRELERAR 655 Query: 307 AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVL 366 + ++I+D+DHFK +NDT+GH GD V++ + + + + +R D+LAR GGEEF L Sbjct: 656 RYRHDVALLIIDVDHFKTINDTYGHVAGDTVLQHIADHMRRELRDADILARFGGEEFIAL 715 Query: 367 LTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN--PNEIYRL 424 L + + A +A R+R +E +I + TIS+G + + + + Sbjct: 716 LPETNLTGALRVAGRLRATIEANPVPLNGQSI--RATISVGCASLHPATRDEHLDTLIQR 773 Query: 425 ADNALYEAKETGRNKV 440 AD ALY AK GRN+V Sbjct: 774 ADRALYTAKAGGRNQV 789 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 4/164 (2%) Query: 282 AHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + D LT+I NR F L + ++ P +++ D+DHFK+ NDT+GH GD ++ Sbjct: 466 SRIDGLTSIHNRRSFDESLDKEWRRLRREQQPLSIILCDVDHFKQYNDTYGHQAGDTCLQ 525 Query: 340 TVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 V I KS+ RP D++AR GGEEF VLL + A +AE IR +E L + + Sbjct: 526 EVALAIDKSVKRPADMVARYGGEEFVVLLPNTPLPGATHIAEMIRTAIEVLRIPHKTSSA 585 Query: 399 PQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVV 441 +VT+S+G N E+ AD ALY AK+ GRN+V+ Sbjct: 586 SDQVTLSLGVATVIPNTQQTYTELLEAADAALYRAKQQGRNRVI 629 >UniRef50_C0QFG9 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG9_DESAH Length = 339 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 3/189 (1%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMD 318 ++ + + L V+K A D LT + NR F + L Q + +C++++D Sbjct: 153 GRMASSSQELASLRKKLDVSKKDAETDALTGLLNRRGFESRLHPLLKDPQ-SCFCLIMID 211 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 IDHFK+VNDT+GH VGD ++K + N++ + + D LAR GGEEF +LL + E+A A+ Sbjct: 212 IDHFKRVNDTYGHLVGDSILKALANLLKQQTKGKDCLARFGGEEFIILLPETRLEQAGAV 271 Query: 379 AERIRENVERLTGDNPEYAIP-QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGR 437 AE IR+ + + P K+TIS+G + N + D ALY AK GR Sbjct: 272 AEDIRKKLAAQEWKQRKTGKPMGKITISLGVTQYRPNESEV-TLIHRVDTALYTAKRNGR 330 Query: 438 NKVVVRDVV 446 N+VV ++V Sbjct: 331 NRVVTEEMV 339 >UniRef50_B7WUF6 Diguanylate cyclase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WUF6_COMTE Length = 373 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 4/205 (1%) Query: 238 LLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFF 297 LL ++ + + + T E+ L ++ + + N A D LT + NR F Sbjct: 157 LLALTSLAFCAFVVRATRELSRALQSLLRLRRELEIQHSIASNAARTDDLTGVNNRRAFN 216 Query: 298 NELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLL 355 + A P C ++ DIDHFK++NDT GH GD+V++ VV I ++R DL Sbjct: 217 EKAETMFAYTRRYGVPLCALLFDIDHFKQINDTHGHAAGDKVLQAVVRQIKSALREADLC 276 Query: 356 ARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA 415 R+GGEEFGVLL + + A +AERIR V+ P +VTIS+G Sbjct: 277 GRLGGEEFGVLLAGTNMQEAVQIAERIRLAVQA--IKEPVNDTTLQVTISVGVAEADSAC 334 Query: 416 LNPNEIYRLADNALYEAKETGRNKV 440 + + + + AD A+Y AK GRN+V Sbjct: 335 ADVSTLLKQADAAMYRAKSNGRNQV 359 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 160/430 (37%), Gaps = 50/430 (11%) Query: 61 MQLYFIYDRRQ------FSNCVLSLAFLSCLIYF-------------VITVIIIQQIIEE 101 ++ +F YD+++ ++ + + +YF V+++++ + Sbjct: 159 LESFFEYDQQKIMALGVLYGMLIIMGLYNIFVYFAVRETVYLHYVGYVLSLLLFMVALNG 218 Query: 102 RLTSSV-----VQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLF 156 + ND + + L+F ++ +T ++ K+ L + Sbjct: 219 LGYQYLWSRWGGLNDRILLQGIAFTIIFSLLFARDFLRIYPHTHPKSSRIVKIILWAASG 278 Query: 157 FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIM---------IFMWLTLL 207 V + + I ++ + +FM +L Sbjct: 279 LVVASLFLPYFYVIR-VLIICTILACVMGLFAGFYRQVEGYGVARFYLYSWSLFMLGAIL 337 Query: 208 SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMS---------RYSVSTWYISRTIEVV 258 F+ L ++ +++ V + ++ RY + E V Sbjct: 338 VALNKFDVLPSNMITEYSMLFGTGVGTVVLSAALAVRLNDEKNKRYHAQAEALRVQRESV 397 Query: 259 SKLTVMVIFMCH-IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVM 315 L V + A + +++ D LT + NR L ++ P M Sbjct: 398 ELLEERVKERTSALREANEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAM 457 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTER 374 +MDID FK NDT GH VGD +K V +I + RP D++ R GGEEF VLL D + Sbjct: 458 MMDIDRFKAFNDTHGHQVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDG 517 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAK 433 A+ +AERIR VE L +P VTISIG + + + AD ALY AK Sbjct: 518 AQIIAERIRAAVENLDFTVSGQRVP--VTISIGVSELTYCASDSGKALVEAADEALYSAK 575 Query: 434 ETGRNKVVVR 443 GRN V + Sbjct: 576 SAGRNCVRLA 585 >UniRef50_Q3A5K1 Two component signal transduction response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5K1_PELCD Length = 323 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 95/176 (53%), Gaps = 10/176 (5%) Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKV 325 + + A IA D LT ++NR YF +T + A + P ++++D+DHFKK+ Sbjct: 129 IHALHQAQSQLARIALTDSLTGLYNRAYFDATITQEVARCSRRGLPLSLLMVDLDHFKKI 188 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 NDT+GH GDQ + V ++ + R D + R GGEEF V+L + A +AERIR+ Sbjct: 189 NDTYGHLAGDQALAAVALVLKEQSRISDTVCRFGGEEFAVILPETTNANAATVAERIRKK 248 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQ-ENALNPNEIYRLADNALYEAKETGRNKV 440 + +L P VT SIG + N L P+ + AD ALYEAK GRN+V Sbjct: 249 ISQLDLAFP-------VTASIGVGSAKVTNQLLPDHLIAEADGALYEAKSQGRNRV 297 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 90/376 (23%), Positives = 150/376 (39%), Gaps = 26/376 (6%) Query: 75 CVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNK 134 +L L + ++ +++ + E S+V IA+ L+ + + +L F+ Sbjct: 36 ILLVLLVMFSPVFIGGVLLVAYLVSPEWFDRSIV---IALLSLYGFVFVLLLYFILAAFH 92 Query: 135 VSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKAS 194 L M V + ++Y L + + AS Sbjct: 93 RRRQKSSWPLMENIMFGSY----VVIVCAGSWFTGTYYTFGALFL----------FFGAS 138 Query: 195 YVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRT 254 + + + L+ F L I + + A L+ L + W+ + Sbjct: 139 ISSSLADIRKVRLAYLASFGALVAFIVMDSSGMFRHAPLFTRIPLHPDGSPLPVWFGVQV 198 Query: 255 IEVVSKLTVMVIFMCHIFS---ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP 311 VS ++ I + V + ++ D LT + NR F + +S Q+ P Sbjct: 199 FITVSLTIMLYITIVTFKRWGVREDVYRKMSTVDGLTRLTNRRTFIERSEKELSSGQRRP 258 Query: 312 ---YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 +++DIDHFK +NDT+GH GD+V+ + I+ + RP D + R GGEEF +LL Sbjct: 259 SSHISCIMIDIDHFKAINDTYGHAAGDKVLVKIATILTEKARPTDEVGRYGGEEFAMLLP 318 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA-LNPNEIYRLADN 427 A +AER R ++ I +VT S G + N NE+ + AD Sbjct: 319 ATTLAGAVKVAERQRASIANAEIIVDGNII--QVTASFGVASCPSDDIDNINELLKTADV 376 Query: 428 ALYEAKETGRNKVVVR 443 ALYEAK GRN+VV Sbjct: 377 ALYEAKRAGRNRVVAA 392 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDID 320 MV + H K ++ D LT +FNR +F + + + A++T + ++DID Sbjct: 359 AMVNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLDID 418 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 HFK VND +GH VGD V++ + I+ + +RP D+ AR GGEEF + D D +A + E Sbjct: 419 HFKDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHICE 478 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK- 439 R+R I T+S G + + + + + ADNALY AK GRN+ Sbjct: 479 RLRTLCAASEVSRNGGTIG--FTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRNRI 536 Query: 440 ---VVVRDVVNFCE 450 VV D C Sbjct: 537 EHDVVYCDQQTGCS 550 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 4/188 (2%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPY 312 + + ++T ++ + +A +D LT + NR F ++ + + Sbjct: 189 LALAQRITRIIAIALQRDGHEKQLYRLATQDGLTELNNRRQFIELADREIERSRRHGSRM 248 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 V++MD+DHFK +ND +GH VGD+VI+ + + +R DL R+GGEEF +L D Sbjct: 249 SVLMMDLDHFKDINDHYGHAVGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPDTGL 308 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 + A+ +AER+R ++ T+SIG + + +E+ AD LY+A Sbjct: 309 DDARQVAERLRSLASSARLSAVSGSLGY--TVSIGVAERHADETDIDEVLGRADKQLYQA 366 Query: 433 KETGRNKV 440 K GRN+V Sbjct: 367 KRDGRNRV 374 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 2/191 (1%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPY 312 ++++ L + + + + A D LT ++N YF E + A K P Sbjct: 294 LDLLRSLASQISMTIAHANHVSRVELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPL 353 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 ++++DID+FK NDT+GH GD +I+T+ II ++ R D++ R GGEEF VL + Sbjct: 354 SLLMIDIDYFKLYNDTYGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTV 413 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 + A +AERIR V N +T+S+G +A + E+ AD ALY A Sbjct: 414 DEAFKIAERIRMAVAEYPFANKHSQPGGILTVSMGVAGYPYDAQSETELIDHADMALYRA 473 Query: 433 KETGRNKVVVR 443 K T +N+V + Sbjct: 474 KRTSKNRVCLY 484 >UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP76_9GAMM Length = 322 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 4/188 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYC--V 314 ++ +T V + A + + ++ D LT +FNR Y+ L + ++ + Sbjct: 132 LIYDVTDNVTSQLELQQANKKLQALSREDRLTGLFNRGYWEECLNNEFERFNRSQMTSTL 191 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++ DIDHFK+VNDT+GH GD+VI+ V + + + R D+L R GGEE+G +LT + E Sbjct: 192 VMFDIDHFKRVNDTYGHQAGDEVIRVVADTLREQARKTDILGRYGGEEYGAILTGTNGEN 251 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A AER+R +E L E+ + K TISIG +P E +D ALY++K+ Sbjct: 252 AMIFAERLRARIESLVVPYGEHQL--KFTISIGVSELTYEHDSPKEWLEQSDQALYKSKQ 309 Query: 435 TGRNKVVV 442 +GRN V + Sbjct: 310 SGRNWVTL 317 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 3/174 (1%) Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTW 329 + +A D +T + NR YF + ++ + P +++ D+D FK VNDT+ Sbjct: 661 REKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKAVNDTY 720 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GH VGD V+K + +R D++ R+GGEEF V L + D + A LAER+R +E Sbjct: 721 GHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRVVLEEA 780 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + + P+ I T+S+G V + + + + + AD ALY AKE GRN+V Sbjct: 781 SVELPDGGIVD-FTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVEAY 833 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 12/216 (5%) Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTV---MVIFMCHIFSALR----VTKNIAHRDPLTN 289 LL ++ I ++S++T+ + I + L+ K ++ D LT Sbjct: 1080 GLLIAHDCHQPRKWLDHEITLLSQITITAAIAIHQGELHQQLQNANLELKKLSAIDGLTQ 1139 Query: 290 IFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 + NR+ F L + + +++ D+DHFK NDT+GH GD ++ + +I Sbjct: 1140 VANRHRFDVYLEQEWRRLMRSRHSLSLILSDVDHFKWYNDTYGHLAGDHCLQQIARVIKT 1199 Query: 348 SI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI 406 S+ RP DL+AR GGEEF ++L + + A +AE+IR+ V+ LT + + A Q VT+S+ Sbjct: 1200 SVGRPADLVARYGGEEFAIVLPETSLKGALFVAEQIRQKVKNLTIPHTKSAY-QCVTLSL 1258 Query: 407 GAVVT-QENALNPNEIYRLADNALYEAKETGRNKVV 441 G AL+P + AD ALY+AK GR++VV Sbjct: 1259 GVASLIPSGALSPKALINAADEALYQAKANGRDRVV 1294 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 118/291 (40%), Gaps = 19/291 (6%) Query: 164 VAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNG 223 A L++ Y L + + S +I F+++ L S + + L Sbjct: 301 TALNLTTRPLIYTLAELCNDPQYHLLSKAFSNQSIQSFLFIPLRSRSQWVGCLTLFRQER 360 Query: 224 VTVIAFCAVLYNISLLFMSRYSVSTW-YISRTIE--VVSKLTVMVIFMCHIFSALRVTK- 279 + M R S W I R + +L + I H++ L + Sbjct: 361 EWETLWAGRENPDQRNQMPRQSFVAWCEIQRGVPDWTGEQLKLAEILGLHLYMILTQQRL 420 Query: 280 -----NIAHRDPLTNIFNRNYFFNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 + A DP+T + N F + L + A+ V+I+D++ FK++ND+ GH Sbjct: 421 THLIHHQASYDPITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDLNQFKRINDSLGHG 480 Query: 333 VGDQVIKTVVNIIGKSIRPDD----LLARVGGEEFGVLLTD-IDTERAKALAERIRENVE 387 VGD +++ + + + LLAR G F VLL+ + A ++++ + + Sbjct: 481 VGDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDEAINFSQKLLNDFQ 540 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 + + +SIG + + + + + A++A+Y+AK+ G+N Sbjct: 541 E---PFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQGKN 588 >UniRef50_B8KV43 Sensory box histidine kinase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV43_9GAMM Length = 494 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 102/194 (52%), Gaps = 7/194 (3%) Query: 256 EVVSKLTVMVIFMCHIFSAL---RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT-- 310 ++ + ++F+ I R K IA +DPLT NR + + + + A + Sbjct: 295 DISGQFAGSIMFLKDISDRKAVERRLKAIADKDPLTGAGNRRALESVIKSELSRAHRHDE 354 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P V I+DID FK VND +GH +GD+V+ + + IRP D AR+GGEEF +LL Sbjct: 355 PLSVAILDIDWFKSVNDNYGHLMGDRVLIDIAKLCKDLIRPYDTFARIGGEEFALLLPKT 414 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 A+ LAER+R+ V T E + +VTISIG + + A E+ AD ALY Sbjct: 415 SVPEAERLAERLRQRVAEHTTQAGENRV--QVTISIGVALLAKGAKTLEEMIESADRALY 472 Query: 431 EAKETGRNKVVVRD 444 AK GRN+VV + Sbjct: 473 CAKLDGRNRVVTFE 486 >UniRef50_B9Z5H6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5H6_9NEIS Length = 650 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 5/193 (2%) Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDID 320 + + I S K RDPLT +FNR Y + L A A P ++++D D Sbjct: 455 ALRQHLNEIESLQSGLKEQLVRDPLTGVFNRRYLDDALPRVLAHTLALGKPVALLMLDAD 514 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 HFK++NDT+GH GD V+ T+ + S+R +D++ R GGEEF ++L + E A A AE Sbjct: 515 HFKRINDTYGHKAGDCVLSTLGARLRDSLRSNDMVCRYGGEEFLIVLPGMSLEHAIAKAE 574 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 ++R+ V++ + ++ + VT+SIG + +A + + AD ALY AK +GR+++ Sbjct: 575 QLRKVVQQWPIEALDHTL--NVTVSIGVACSPLHAEDAESLVHAADTALYVAKSSGRDRL 632 Query: 441 VVRD-VVNFCESP 452 V + P Sbjct: 633 CVAEPPAGVSPHP 645 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 4/187 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCV 314 ++ +T + + L I+ D LT ++NR ++ + L + A A++ + Sbjct: 143 LIEDVTDACHYQMQLQKTLAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSL 202 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++D+DHFK +ND +GH GD V+ V +I +R +D R GGEEF ++L + D+ Sbjct: 203 IMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAG 262 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A LA+RI + + I KVT+S+G N E+ AD+ALY+AK Sbjct: 263 AIELAQRICRIIATTPFTYNDQVI--KVTVSLGVAQLSSKESNYEELITQADSALYQAKS 320 Query: 435 TGRNKVV 441 GRN+V Sbjct: 321 QGRNQVC 327 >UniRef50_B3QU32 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QU32_CHLT3 Length = 606 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 5/177 (2%) Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFK 323 + + + + + D LT + NR +F + + K P + + DID FK Sbjct: 431 LLLERLREQAETLERLVTYDGLTGLANRRHFDEQFEYEFRRTRRYKRPLSIAMSDIDFFK 490 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 KVND + H VGD+V+K V +I +++R DL+AR GGEEF + T+ + E A AE+IR Sbjct: 491 KVNDNFSHQVGDEVLKKVASIFRENVRAGDLVARYGGEEFVFIFTETNKESAIRAAEKIR 550 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 + +E D KVTISIG +E+ AD+ LYEAK GRN+V Sbjct: 551 KAIEDY--DWSNVHAGLKVTISIGVAE-DAGFDGCDELIAAADSKLYEAKRNGRNQV 604 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 6/204 (2%) Query: 247 STWYISRTIEVVSKLTVMVIFMCHIFSALRV---TKNIAHRDPLTNIFNRNYFFNELTVQ 303 +W I+ ++ ++ I +++ + +++ D LT I NR F + LT + Sbjct: 303 QSWNIAPVLDNHGEIQHFAAVGEDITEKMKLQSLLQEMSYMDGLTGIANRRRFDDFLTHE 362 Query: 304 SASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS-IRPDDLLARVGG 360 A + P +++MDID FK+ ND+ GH GD +K VV+ + +R DLLAR GG Sbjct: 363 WYRAARYAKPLAIIMMDIDFFKRYNDSLGHLAGDDALKRVVHALKSRVLRRTDLLARYGG 422 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEF +L D + A AE +R+ V L +P+ I VTIS+G P+ Sbjct: 423 EEFICILPDTNVIDATLFAETLRQAVCALQLPHPDSNISSFVTISVGVACCTPREGEPSN 482 Query: 421 IYRLADNALYEAKETGRNKVVVRD 444 + LAD ALY AK GRN+V V D Sbjct: 483 LLGLADEALYRAKTLGRNRVEVID 506 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 6/207 (2%) Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN- 298 F +V++W+ + + + + LR +A DPLT I NR F Sbjct: 109 FPIELTVASWFGEDRRLSFIGIIRDITERKRLEAELR---QLATTDPLTGILNRRRFTEL 165 Query: 299 -ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 + A + P ++++DID FK++ND +GH VGD+VI+++ + +R D+L R Sbjct: 166 TTQEIHRAHRLRHPLTLIMLDIDWFKRINDAFGHTVGDRVIQSLASACASELREIDILGR 225 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN 417 +GGEEF V+L ++ + +AER+R+ VE L + I + T S+G V ++ + Sbjct: 226 LGGEEFAVVLPELGASGSLEVAERLRQKVEGLQITLNDGRI-VRFTCSLGVAVLKDTDQS 284 Query: 418 PNEIYRLADNALYEAKETGRNKVVVRD 444 P+ + ADNALY AK GRN V Sbjct: 285 PDTLLVRADNALYRAKRDGRNCVRAAS 311 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 7/188 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKT 310 RT+ + + I + + + ++ D LT ++N Y L ++ A+ + Sbjct: 483 RTLGTFAGQASVAIENVLLH---QEAERLSLTDALTGLWNYRYLTMTLGHEIERATRFRR 539 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P ++++D+D FK +ND GH GD V+ + + ++R D +AR GGEEF V+L + Sbjct: 540 PLALLMIDLDRFKDINDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVILPET 599 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 D + A AER+R+ V + IP VT SIG V + + + R AD ALY Sbjct: 600 DADGAAHTAERLRQAVRGTPFHVEQMDIP--VTASIGIAVFPRHGSSAAILLRAADEALY 657 Query: 431 EAKETGRN 438 AK +GR+ Sbjct: 658 VAKHSGRD 665 >UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKN5_9DELT Length = 333 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 4/196 (2%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKT 310 ++ E+ S++ ++ + A R ++ D LT + NR F L + A + Sbjct: 135 KSAELDSRVRDLLALKEQLEEANRKLNELSLTDGLTGLANRRSFQEALQTEWRRAMRNRH 194 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTD 369 +++ DID FK+ NDT+GH GD + + +I + R DL+AR GGEEF +LL D Sbjct: 195 FLTLILADIDSFKQFNDTYGHVAGDDCLVQIAKVIKSPLMRSSDLVARYGGEEFAILLPD 254 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNA 428 D + + LAE IR VE+L D+ A VT+S G V L ++ AD A Sbjct: 255 TDLKGGEHLAEEIRREVEQLEIDHENSATGAHVTMSFGVASVVPRLDLVELDLVCAADKA 314 Query: 429 LYEAKETGRNKVVVRD 444 LY AKE GRN+V+ +D Sbjct: 315 LYAAKEDGRNQVLTQD 330 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 5/175 (2%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVND 327 + A ++ D LT I NR F L + + + +T ++++DIDHFKK ND Sbjct: 158 ELEEANHRLSELSLTDGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDIDHFKKYND 217 Query: 328 TWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 +GH GD ++ V ++ S R DL++R GGEEF ++L D A +AER+R V Sbjct: 218 HYGHQQGDDCLRRVAEVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEIAERLRREV 277 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAKETGRNKV 440 E + + + +VT S+G + A++P E+ R AD +LY+AK GRN V Sbjct: 278 ENMDMPHVLSDVG-RVTASMGVAASMPCKAMSPAELLRRADESLYQAKSEGRNCV 331 >UniRef50_A6Q525 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q525_NITSB Length = 350 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 6/191 (3%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN---ELTVQSASAQKTPY 312 ++ +L + H+ LR TKN A D LT +FNR F +L + + P+ Sbjct: 163 QLNEQLKKYYEEINHLRRELRDTKNKAEFDYLTELFNRRKFEEYFHKLLKEFNEGEGKPF 222 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 ++I+DID FK++NDT+GH +GD+V+K + ++I + + AR+GGEEF +LL + Sbjct: 223 SLIILDIDDFKQINDTYGHLLGDEVLKNLSSLIKTFLHSAHIPARIGGEEFAILLPETPL 282 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 + AK +AER+R+ VE T E + T+SIG Q+ + + + AD ALYEA Sbjct: 283 DEAKTIAERLRKTVENRTIPIAEGDL--NFTVSIGVAQVQKGD-TMDSLLKRADEALYEA 339 Query: 433 KETGRNKVVVR 443 K G+N V+ + Sbjct: 340 KRNGKNMVIAK 350 >UniRef50_A8ZUP2 Serine/threonine protein kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUP2_DESOH Length = 1644 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 4/195 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQ 308 ++R ++ + I L +++ A D LT ++N +YF N L + A + Sbjct: 1451 LTRNAFTRDRIETLEIISLSAAGRLELSRK-AVTDGLTGLYNHDYFQNMLQQELLLAKRK 1509 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 ++++DIDHFK+ NDTWGH GD V++ V I +S R D++AR GGEE +LL Sbjct: 1510 GRELSMIMIDIDHFKRFNDTWGHQAGDMVLREVAAEIRESCRSSDVVARYGGEEMALLLH 1569 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + E A ALAE+IR VE L ++ +VTIS+G +A N + + AD+A Sbjct: 1570 ETGPEAAFALAEKIRRRVEALRVEHAPGEY-LQVTISLGVAGFPIHAKNKKPLVKKADDA 1628 Query: 429 LYEAKETGRNKVVVR 443 LY +K GRN V + Sbjct: 1629 LYSSKAGGRNMVTLA 1643 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 130/281 (46%), Gaps = 12/281 (4%) Query: 174 SYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVL 233 S+ +A LTN W + ++ + L+ V + D +T+ + Sbjct: 72 SFAAIMATLTNNAANKGWPSVPKNVLAMLAGALIWVTVRGFKFSPDTGWPLTIFCMVGIC 131 Query: 234 YNISLLFMSRYS-------VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDP 286 + ++ + V +R E++ +V+ + I + + + A RD Sbjct: 132 GYVLVIGNVGFQRNLQLRRVREELRTREQELLKANQSLVVNLQEIEALQQQLREQASRDS 191 Query: 287 LTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNI 344 LT ++NR Y L + A + P ++++D+D FKK ND GH GDQ + V Sbjct: 192 LTALYNRRYLDTTLDRELASCKREGKPLSLIMIDVDDFKKYNDLHGHQAGDQCLIAVAKT 251 Query: 345 IGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVT 403 + S R DL AR GGEEF ++L +D A+ LAE +R +VE L + E + VT Sbjct: 252 LQASAKRASDLAARYGGEEFLLVLPGMDATAAQGLAEELRRSVEALKIPH-EQSRGGSVT 310 Query: 404 ISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 ISIG V T ++ + + R AD ALY AK GRN+V + Sbjct: 311 ISIGLAVMTNDSHKDVAGLLRAADEALYHAKHGGRNQVRLA 351 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 8/192 (4%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQ 308 ++ + V+ + + + A R K A D LT ++NR ++ ++ Sbjct: 500 LADEVAVLLSRKEIDLLNAQLTEANRRLKRQATTDSLTGVWNRYRMQEQIELERGAHERY 559 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 TP +++ DIDHFK VND +GH GDQV+ + + +R D L R GGEEF VL T Sbjct: 560 GTPCSLLLFDIDHFKAVNDQYGHEAGDQVLVALARAVVGELRATDFLGRWGGEEFIVLAT 619 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + E A LAER+R+ + L VTIS+G + + AD A Sbjct: 620 NSAPEEAWTLAERLRQCIAGLRFPG-----VGPVTISVGVASLSRGD-TVDRLIDRADRA 673 Query: 429 LYEAKETGRNKV 440 +Y AK+ GRN+V Sbjct: 674 MYRAKQRGRNRV 685 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 14/274 (5%) Query: 191 WKASYVTIMIFMWLTL---LSVNLYFNGLRYDIW--NGVTVIAFCAVLYNISLLFMSRYS 245 +K I F+W + L + + + +V ++ Sbjct: 280 YKEVMDPIYSFLWTAIGGAFLTLLIITPFSIKLIQSISIPLKRLSSVARQMTEGKFDCEC 339 Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQ 303 T EV + + ++ + A D LT + NR Y E V Sbjct: 340 TGTGVSHPPEEVTQLIDGFCAMQGKVDRTVQELQKSAVTDQLTGLPNRRYLMKEGTRLVD 399 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 A P +MIMDIDHFK +NDT+GH VGD V++ + + +R D++AR GGEEF Sbjct: 400 IAIRAGQPCSLMIMDIDHFKVINDTYGHTVGDIVLQQISKAFQEVVRSSDIIARYGGEEF 459 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA----LNPN 419 V+ D + + LAER+R++VE +N E P TISIG + Sbjct: 460 VVVAPGSDIDSGRTLAERLRQSVEARIFNNDEQ--PLTCTISIGVSHYATDIKFGVDAYE 517 Query: 420 EIYRLADNALYEAKETGRNKVVVRDVVN-FCESP 452 ++ ADNALY+AK+TGRN++ + + N +SP Sbjct: 518 DMLARADNALYKAKDTGRNRICIAEPHNKLTDSP 551 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 4/219 (1%) Query: 226 VIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRD 285 ++A L + R S + +++ L + F+ + A D Sbjct: 115 LVAILGDKEPFGSLSVGRVMSSKPFTEEDGKILRSLAFIFSFIVKEELEKKRLLEKAIID 174 Query: 286 PLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVN 343 LT ++NR Y + A A++ P +++ D+D+FK+VNDT+GH VGD+V+ + Sbjct: 175 HLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLVKFAS 234 Query: 344 IIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVT 403 I+ ++R D+ R GGEEF VLL E A +AERIRE E+ + ++T Sbjct: 235 IVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEKFLFRFEGEVM--RLT 292 Query: 404 ISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +S G + E+ ++AD A+YEAKE G+N++ V Sbjct: 293 VSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIEV 331 >UniRef50_Q3AFS2 GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFS2_CARHZ Length = 543 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 7/192 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKT 310 R +E +S + ++ +++ L K +A +D LT ++NR YF L + + K Sbjct: 353 RRLENISGQVALAVYNGYLYLRL---KELAQKDELTGLYNRRYFLERLNEEHLRSRRHKL 409 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 Y ++++DID+FKK+NDT+GH GD V+ + ++R DL AR GGEEF VLL Sbjct: 410 NYTIVLLDIDYFKKINDTYGHDCGDLVLNDFGRFLKDTLRRTDLSARYGGEEFVVLLPQT 469 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 + A LAER+RE V+ + K T+S+G E+A E+ LAD ALY Sbjct: 470 GKKEAYLLAERLREKVKERVLIFQGQKV--KYTVSMGLAAYPEDAEEYRELLSLADKALY 527 Query: 431 EAKETGRNKVVV 442 +AK GR+KVV+ Sbjct: 528 QAKNRGRDKVVM 539 >UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP06_9GAMM Length = 483 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 3/227 (1%) Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 R + + +I + +L + I + + M+ Sbjct: 248 FRREQIRSLLLIPLVSDQNAFGMLGFDAVEAPHRWTDDQITALRLVADMIAGTLARKQVE 307 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + A D LT + NR F ++L + A+ ++ ++++DIDHFK ND +GH GD Sbjct: 308 QELARQARVDGLTGLANRREFDHQLERECAARRERSLSLLMIDIDHFKPYNDAFGHQAGD 367 Query: 336 QVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 ++ V ++I + RP D+ AR GGEEF +L D + E +AERIRE V L P Sbjct: 368 DCLRAVADVIRSILNRPADVGARYGGEEFACVLADTNPEGGLRVAERIREAVYGLDLKQP 427 Query: 395 EYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKV 440 + +VTISIG + P + R AD ALY AK GRN+V Sbjct: 428 DTD-EGRVTISIGVCSVHTRWPVEPRALLRQADEALYRAKRAGRNRV 473 >UniRef50_A4VQQ9 GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VQQ9_PSEU5 Length = 466 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 99/197 (50%), Gaps = 9/197 (4%) Query: 251 ISRTIEVVSKLTVMV-----IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ-- 303 IS + VV+ L ++ + + A +A+ D LT + +R F L + Sbjct: 270 ISLALSVVALLIFLLSSRYFQSIARLRLAHGQLAQLANTDVLTGVSSRRAFLAGLEAELA 329 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 A ++++DIDHFK+VND GHP+GD V+K +R DLL R+GGEEF Sbjct: 330 RARRHNESLSLLMLDIDHFKRVNDVHGHPIGDAVLKQFSETCAGMLRAHDLLGRLGGEEF 389 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 ++L D E A+ +AE+IR V + I VT+SIG + +++ Sbjct: 390 AIVLPHTDAEGARCVAEKIRTAVAQTPMPTAAGDI--TVTVSIGLAQMEGLPGEVDQLMA 447 Query: 424 LADNALYEAKETGRNKV 440 AD ALYEAK GRN+V Sbjct: 448 RADQALYEAKRGGRNQV 464 >UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae RepID=Q2SUR3_BURTA Length = 628 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 98/452 (21%), Positives = 170/452 (37%), Gaps = 32/452 (7%) Query: 15 SLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSN 74 LL G ALV + L+ F +A ++ F+ Sbjct: 186 CLLIGFALVPAYLIVYVRFFID-----PRLVFENHQFHELAIAAATLEGLFVTYVTWRCY 240 Query: 75 CVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF---RQMSLCILIFLAL 131 L L +I + + + +I ++ L+ ++ + IL+ + Sbjct: 241 LSSGEPLLRWLTLGFFGFALIYSL--HGAFTGMAHQNIWLFLLYGPASRLVMSILLLVGQ 298 Query: 132 VNKVSENTKQRNLFSKKMTLCISLFFVFG---------GPIVAHILSSHYESYNLHIAEL 182 ++ L FV PI H+ + I L Sbjct: 299 LSYFRNADPPERRTLLSTWLPWIAGFVLVCVAVAAIAYSPIAGHLWTRASMEGGAMIVSL 358 Query: 183 TNENGQVVWKA----SYVTIMIFMWLTLLSVNLYFNGLRYDIW---NGVTVIAFCAVLYN 235 N + + V + M L S+ +W + + F + + Sbjct: 359 VNVALLLARRIRTPLMLVYGISVMSFALSSIAFILGKPWNHMWWLAHAIFAAGFFMLSFG 418 Query: 236 ISLLFMSRYSVSTWYISR--TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 + ++ S +T Y + + + + + + +++A DPLT NR Sbjct: 419 VVQALITTRSFATVYSQQDLMARLAESMARTEGALQELKRTNQKLEHLATTDPLTGASNR 478 Query: 294 NYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 F ++ + A A++ T + ++ +D+D+FK +ND +GH VGD V++ V +IRP Sbjct: 479 RKFIEQMQAEIARAKRDGTAFSLLALDLDNFKTINDNYGHQVGDVVLRNFVRQCLAAIRP 538 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D +ARVGGEEF VLL + + A +AER+R + + P VT+SIG Sbjct: 539 YDHIARVGGEEFMVLLPRMLADTASGIAERVRTTIANASFGIDGTHTP--VTVSIGVSQY 596 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + +EI AD LY AK GRN+VV Sbjct: 597 GRDGDTVDEILSAADKLLYRAKNEGRNRVVAS 628 >UniRef50_A1S6F8 Diguanylate cyclase n=2 Tax=Shewanella RepID=A1S6F8_SHEAM Length = 355 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 3/195 (1%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT 310 +S ++ S L M + H+ + + I+ D LT + NR F + L + + Sbjct: 163 VSENADIHSSLKSMDQELNHLRAEITELSVISLTDKLTGLNNRRAFESRLAQEFLPSTPK 222 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 ++++DIDHFK+ NDTWGH GD+V+ V + ++++ +DL+AR GGEEF ++L D Sbjct: 223 -CSLLVIDIDHFKQFNDTWGHNAGDKVLVYVAQNLKQAVKGEDLVARYGGEEFVIVLKDT 281 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIP-QKVTISIGAVVTQENALNPNEIYRLADNAL 429 E A +AE++R+ + + + KV++SIG N P + + AD AL Sbjct: 282 SAEDAANIAEKLRDRIANKKLTLKKDNLDLGKVSVSIGVAKAYAN-ETPEQFFERADGAL 340 Query: 430 YEAKETGRNKVVVRD 444 Y AK TGRN+V + D Sbjct: 341 YRAKGTGRNRVCLAD 355 >UniRef50_A9FZW1 FHA domain protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZW1_SORC5 Length = 299 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 4/165 (2%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 + D LT I N+ Y + L + + +++ DIDHFK++ND GH GD V Sbjct: 137 RMTIIDGLTQIHNKRYLYEALEREIIRGRRHERDLAILLFDIDHFKRINDVHGHLAGDFV 196 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K V I+ IR D++ AR GGEEF ++L + E A AL E +R+ V + Sbjct: 197 LKEVARIVQSRIRRDEVFARYGGEEFAIILPETSIEGAAALGETLRQKVAEHLFVFQADS 256 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 I +VTIS+G + QE N++ + AD LY AK +GRN+V Sbjct: 257 I--RVTISVGVALLQEGDRTANDLIKRADERLYHAKNSGRNRVCA 299 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 4/195 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 I + V T++V + R A D LT NR F + + A Sbjct: 297 IVLVLVVAGLSTLLVRGQIRLNRQSRELALAASTDMLTGALNRRAFMESASREFARVCRY 356 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 +++D+DHFK VNDT+GH GD V+ + + I +R D+ R GGEEF +LL Sbjct: 357 GGHLSCIMIDLDHFKNVNDTYGHAAGDLVLSSSAHYIASRLREPDMFCRYGGEEFVILLP 416 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D A +AE +R + L + +P +T S G + + LAD A Sbjct: 417 GTDRNGAATVAEELRAGLAGLDLQRGDEKLP--LTASFGVAEIHAQCATLDTLLSLADQA 474 Query: 429 LYEAKETGRNKVVVR 443 LYEAKE GRN+V + Sbjct: 475 LYEAKENGRNRVCLA 489 >UniRef50_B5ZCI9 Diguanylate cyclase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCI9_GLUDA Length = 472 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 6/201 (2%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--P 311 + + +T ++ + +F A R + ++ DPLT + NR + + ++ + A +T P Sbjct: 270 LAALHAGVTEILSSLEVLFHASRSSNDV--EDPLTRVLNRRFLPSIISYELRVAHQTGRP 327 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 V+ +DIDHFK +NDT+GH GD V++ + ++ ++ R D++ R GGEEF VL+ D D Sbjct: 328 MSVLFLDIDHFKHINDTFGHAAGDSVLQAIARVLEEASRLSDVIFRYGGEEFLVLMGDTD 387 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 TE+ AER+R+ +E P+ + ++T+SIGA + + E+ R AD ALY Sbjct: 388 TEQMLIGAERLRQKIENTPIRLPDGNL-HQITVSIGAAQYAGH-PDYEELLRAADAALYR 445 Query: 432 AKETGRNKVVVRDVVNFCESP 452 AK GRN++ V D + +P Sbjct: 446 AKRNGRNRIEVADAPHHTPAP 466 >UniRef50_Q489Q4 Sensory box/GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489Q4_COLP3 Length = 451 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 3/188 (1%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYC-- 313 + + L + +F K +A+ DPLTN++NR +F + + A++ Sbjct: 263 DKLPALIGFSTDVTELFKLKEEFKLLANTDPLTNLYNRRFFIEQAEKEYQRAKRYSLSMT 322 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 ++ +DIDHFK +ND +GHP GDQV+ + + S+R D+LAR+GGEEF +LL + Sbjct: 323 LISIDIDHFKSINDQFGHPAGDQVLIEIAKQLKASLRQTDILARIGGEEFSILLPETSAM 382 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAK 433 A AERI+E RL ++ +++SIG + + ++ AD ALY+AK Sbjct: 383 SAMTFAERIKEEQSRLII-TGDWQGEINLSVSIGVSSLIASDKAFDVLFSRADKALYQAK 441 Query: 434 ETGRNKVV 441 TGRN V Sbjct: 442 NTGRNTVC 449 >UniRef50_Q2SP63 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SP63_HAHCH Length = 584 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 10/271 (3%) Query: 175 YNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLY 234 + + I+ ++++ F+ L + + + A+ A+L Sbjct: 297 WLMLISLACTPFFTYHTMIVPISLLTFVIAAQLLLMGVLALMAGSRPARYYMTAWTALLI 356 Query: 235 NISLLFMSRYSV-STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 + + + + +++ + LT MV+ + S + + + D LT +FNR Sbjct: 357 GVLAYMLKTFGLLPHNVLTQNGFQIGSLTEMVLLSLALSSRVNELQRKTYTDALTGLFNR 416 Query: 294 NYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 +F ++ + AQ K P ++++DID FK+ NDT+GH VGD +K V I+ K +R Sbjct: 417 RHFDDKFATEFHRAQQSKQPLTLLVIDIDCFKQFNDTYGHNVGDHALKEVARILAKGVRK 476 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 + R GGEEF V+L + D + A +LA R+R VE E K++IS+G Sbjct: 477 PNCPCRYGGEEFAVILPNTDHDAAMSLANRLRVKVEE------ETESGYKLSISVGVASM 530 Query: 412 QENALN-PNEIYRLADNALYEAKETGRNKVV 441 + + PN+++ AD ALY AK+ GRN+V+ Sbjct: 531 AHDEFDCPNKLFERADYALYTAKQQGRNRVI 561 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 6/190 (3%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 + ++ + + + +LR + RDPLT +FNR Y LT + P + Sbjct: 491 MFARSIGLALANLQLRESLRY---QSIRDPLTTLFNRRYMEESLTREINRVTRNTYPIGI 547 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++DIDHFK+ NDT+GH GD V+K + + + +R D+ R GGEE ++L +++ + Sbjct: 548 LMIDIDHFKQFNDTYGHDTGDSVLKAIGHFLQSQVRGSDIACRYGGEELILILPEVNLKE 607 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 + AE+IRE V++L + + +T+SIG + L + + AD ALY+AKE Sbjct: 608 TQNRAEQIREGVKKLQLKRGSQKLNE-ITVSIGVACFPDQGLTGEIVIQAADAALYKAKE 666 Query: 435 TGRNKVVVRD 444 GR++VVV D Sbjct: 667 QGRDQVVVAD 676 >UniRef50_A1HSJ3 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSJ3_9FIRM Length = 653 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 3/168 (1%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPV 333 A RDPLT ++NR Y L ++ A ++T V+++DID FK+VND++GH Sbjct: 476 EKLYEQAIRDPLTGLYNRRYMEEVLAMELAQTERTGGTIGVIMLDIDFFKRVNDSYGHEA 535 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD V+K + I +S+R D+ R GGEEF V+L + E AE++R+ L Sbjct: 536 GDVVLKRLGRFIAESVRKGDIACRFGGEEFAVILPNTLAEAVCRRAEQLRQGFAGLAIIY 595 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 E I +++S G V +A + ++ RLAD+ LY+AK+ GRN+VV Sbjct: 596 RE-KIVGPLSLSAGVAVYPGDATSGEDLVRLADSRLYQAKQAGRNRVV 642 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 4/201 (1%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 I+ I + S +T + A R +++A+ D LT I NR F L + + Sbjct: 263 ITHYIGIQSDITERHRMQIALEEANRKLQHLANIDGLTQIANRRSFDETLEQEWKRCFRE 322 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLL 367 + P +++ D+D+FK ND +GH GD+ + V I + I RP DL+AR GGEEF V+L Sbjct: 323 QQPIALILCDVDYFKAYNDYYGHLQGDECLIQVAQAISQVIKRPADLVARYGGEEFVVIL 382 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLAD 426 + D A+ +A+ I++ + +L + + + +T+S+G +P ++ AD Sbjct: 383 PNTDGSGARQVAQLIQDQIRQLQSPHVKSDVSSYITLSLGISSIIPSGMTSPEQLVNAAD 442 Query: 427 NALYEAKETGRNKVVVRDVVN 447 +ALY+AK+ GR+++VV +N Sbjct: 443 SALYQAKQQGRDQIVVNPNIN 463 >UniRef50_A8FZ07 Diguanylate cyclase n=2 Tax=Shewanella RepID=A8FZ07_SHESH Length = 298 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 66/172 (38%), Positives = 88/172 (51%), Gaps = 6/172 (3%) Query: 278 TKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 K D L IFNR Y L + A P + ++DIDHFK+VND +GH VGD Sbjct: 107 LKQENITDSLMGIFNRRYLDRRLKDETERALNYSQPLSIFLIDIDHFKQVNDNYGHQVGD 166 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 V+K + +I S+R D+LAR GGEEF V+L + LAER+R VE PE Sbjct: 167 LVLKNIAQLIKHSLRESDVLARFGGEEFVVILPRTKDSTSYTLAERLRHVVEDFQLTLPE 226 Query: 396 Y----AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 ++ VT+SIG + + AD ALY+AK GRN+V+ Sbjct: 227 ESDKDSLSISVTVSIGVAGLNAQCKDCQCLIENADRALYQAKRNGRNQVITS 278 >UniRef50_D0IUU3 Diguanylate cyclase n=4 Tax=Comamonas testosteroni RepID=D0IUU3_COMTE Length = 519 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS 304 +V +WY E M+ + + + + + DPLT + NR + E + + Sbjct: 323 AVKSWY----FESYELKKAMLKGLGLLQRNITKLREDVNTDPLTGLGNRRHL--EAAISA 376 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 Q P+ V+ +DIDHFK +ND +GH GD+V++ + + + R DDL RVGGEEF Sbjct: 377 FQTQALPFSVIAIDIDHFKHINDGFGHDTGDEVLRQLARTMREVSRVDDLPCRVGGEEFL 436 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 +LL E A AER+R+ VE++ E +TIS+G ++ + +++ Sbjct: 437 LLLPGTGLEAAAHAAERLRQLVEKM-----EIPPVGHITISLGVAHWPDSDPDIKAVFQQ 491 Query: 425 ADNALYEAKETGRNKVVVRDVVNFCESP 452 AD LY AK GRN+V+V + CE P Sbjct: 492 ADAMLYAAKRGGRNRVMVSEA---CEPP 516 >UniRef50_C1D269 Putative metal dependent phosphohydrolase n=2 Tax=Deinococcus deserti VCD115 RepID=C1D269_DEIDV Length = 1251 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 12/205 (5%) Query: 247 STWYISRTIEVVSKLTVM-------VIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + Y R++E+ S + + + RV + D LT ++NR + Sbjct: 1050 ADMYKLRSVELASANVALEKASREKSALLAALQEQSRVLERQLREDALTGVYNRRFIEEN 1109 Query: 300 LTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 +T++ + + P ++++DIDHFK++ND + HPVGD+V++ V I ++ R +DL+ R Sbjct: 1110 VTIEYERHRNSGQPLAILMVDIDHFKQINDRFSHPVGDEVLRRVARIFRETCRANDLIGR 1169 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN 417 GGEEF LL + + +A +AERIR N+E+ E +VT+S+G N +N Sbjct: 1170 YGGEEFLFLLPNSNVRQAAEVAERIRSNIEKYAWH--EIHEDLRVTLSLGI-CADTNVVN 1226 Query: 418 PNEIYRLADNALYEAKETGRNKVVV 442 ++ +AD LYEAK GRN+VV Sbjct: 1227 HEKMISIADAKLYEAKTGGRNRVVA 1251 >UniRef50_C7DA12 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DA12_9RHOB Length = 459 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 280 NIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 N A DPLT +FNR Y L + A + VM++DIDHFK VND +GH GD V Sbjct: 287 NAAVTDPLTGLFNRRYAMPHLERIAERAKESGREFAVMMLDIDHFKSVNDKYGHRAGDAV 346 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 + V + ++R DL+ARVGGEEF V L + E A+ A+R+R V+ P+ Sbjct: 347 LIEVARRLRNNLRLIDLIARVGGEEFLVTLPETTQEEAEIAAQRLRSVVDDTPFHIPQLG 406 Query: 398 IPQKVTISIGAVVTQENAL---NPNEIYRLADNALYEAKETGRNKVVVR 443 +P VT+SIG ++ + AL + ++ AD ALY AK GRN V + Sbjct: 407 MPVPVTLSIGVAMSGDEALLTPPFDHLFGRADAALYSAKNAGRNTVEIS 455 >UniRef50_C6MLU9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLU9_9DELT Length = 465 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 65/174 (37%), Positives = 90/174 (51%), Gaps = 12/174 (6%) Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWG 330 TK+++ DPLT + NR + +L + A V+++DIDHFK NDT+G Sbjct: 298 RLYEETKSVSLHDPLTGLANRRFLDIQLEKVFELARRHGENQSVIMLDIDHFKIYNDTYG 357 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GDQ++ + I+ +R D + R GGEEF LL D D A AER+R VER Sbjct: 358 HQGGDQLLVRLAGILKAQMRKSDFVFRYGGEEFLALLPDTDLPMACDAAERVRAAVEREA 417 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 G VTIS+G ++ + + R AD ALY AKE GRN+V + Sbjct: 418 G----------VTISLGVAAYRDGMPDKEALVRAADAALYRAKERGRNRVETAE 461 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 6/190 (3%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCV 314 +V K + + + + D LT + NR F L + A +++ P + Sbjct: 153 LVEKNRELDRANKELAARREELLALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSL 212 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++DIDHFK++ND++GHP GD V+K V +R DLLAR GGEEF LL + Sbjct: 213 VMLDIDHFKRINDSFGHPFGDHVLKAVAQTARARLREVDLLARYGGEEFIALLPETGPAD 272 Query: 375 AKALAERIRENVERLTGDN---PEYAIPQKVTISIGAVVTQENAL-NPNEIYRLADNALY 430 A + ER+R+ + L ++ ++T S+G L + + R AD +LY Sbjct: 273 ALRVCERVRDAIAALELEHVGGSGKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLY 332 Query: 431 EAKETGRNKV 440 AK GRN+V Sbjct: 333 AAKGAGRNRV 342 >UniRef50_Q2BMK3 Serine/threonine kinase with two-component sensor domain n=3 Tax=Bacteria RepID=Q2BMK3_9GAMM Length = 1723 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 3/178 (1%) Query: 269 CHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVN 326 + K + D LT + NR F L T ++ P +++ D+D+FK N Sbjct: 1539 AQLEELNEELKKLVDSDGLTGLANRRCFDTYLARTWLRLRREQNPLSIVMFDVDYFKTFN 1598 Query: 327 DTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 DT+GH GD + + + + I RP DL+AR GGEEF V+L D D E A A+A +I Sbjct: 1599 DTYGHQSGDDCLVMLAKTVREQIQRPADLVARYGGEEFIVVLPDTDEEGAMAVAGQICVA 1658 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 V L + + VTIS+G T + P+ + LAD ALYEAK+ GRN+V + Sbjct: 1659 VASLKIPHCNSVVADHVTISVGVATTCPDTQGPDSLIELADQALYEAKKQGRNQVKLA 1716 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 4/224 (1%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 + + + A L + L W R +++ + + + Sbjct: 186 YVCMPLAAQGETLGIVHLCEPDAADRPDWLTERQ-QILRGVVDTLALALANLRLRETLRQ 244 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 + RDP T ++NR Y + + P ++++D+DHFK+ NDT+GH GD V+ Sbjct: 245 QSIRDPNTGLYNRRYLEETSSRELRRMERSGQPLAMIMLDVDHFKQFNDTFGHEAGDLVL 304 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K V + R D+++R GGEEF +++ A AE +R+ +++L + + Sbjct: 305 KQVAATLLDHARESDVVSRYGGEEFALMMPGTSLADAAERAEALRKAIKQLHLTHRGRTL 364 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +T S G E + EI AD +LY+AK GR++VV Sbjct: 365 G-TITASFGVSAFPELGASWVEIVNAADRSLYQAKADGRDRVVA 407 >UniRef50_B9JME5 Sensory box/GGDEF family protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9JME5_AGRRK Length = 578 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 7/191 (3%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASA--QKTPY 312 I + ++ + A R + +A +D LT + NR +F N L ++ A KT Sbjct: 380 IGTLRDVSARKAIEDELQDANRRLQALAEQDGLTGLANRRFFDNALLREAGRACQDKTSL 439 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDID 371 ++++D+D FK ND +GHP GD+ +K + I K + RP D+ AR GGEEF LL D D Sbjct: 440 GLLMIDVDWFKAFNDCYGHPAGDECLKRIGGTIQKIVSRPGDVAARYGGEEFAALLPDTD 499 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKV-TISIGAVVTQENALN-PNEIYRLADNAL 429 A A+AE+IR+ V L ++ P +V TIS+GA E A+ P + AD AL Sbjct: 500 EPAAAAIAEQIRQAVLELAIEHRVS--PNQVATISVGAAALTEGAVTEPATLLHNADRAL 557 Query: 430 YEAKETGRNKV 440 Y AKE GRN+V Sbjct: 558 YRAKENGRNRV 568 >UniRef50_B8GC13 Diguanylate cyclase with PAS/PAC sensor n=3 Tax=Chloroflexus RepID=B8GC13_CHLAD Length = 728 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 LL+++ + S I + + + + + LR A DPLT ++NR Y Sbjct: 513 FGLLYIAGEELPR---SELIVMTGDTIKLALSNLALRATLR---EQAIIDPLTGLYNRRY 566 Query: 296 FFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 L+ + AQ+ P V ++DIDHFK+ ND +GH GD +++ + I + +R D Sbjct: 567 LETSLSRELHRAQREQIPLTVAMIDIDHFKQFNDQYGHDAGDTLLRELAVIFREHLRQSD 626 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 L R GGEEF ++L ++ A+ + +RE V++ + + +TISIG ++ Sbjct: 627 LACRFGGEEFVLILPGVNQATAQTRLQHLREVVQQRQIIFAGAPL-RPITISIGYFTCEK 685 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVV 441 + P+ + + AD ALY AK +GRN+V+ Sbjct: 686 EEIEPHILLQRADAALYAAKRSGRNRVI 713 >UniRef50_D1B074 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B074_SULD5 Length = 172 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 3/171 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + K + D LT + NR YF ++ + + K P +M++D+DHFKK+NDT+GH VG Sbjct: 1 MLKQESITDGLTGLRNRRYFDQRISEEVALSRRYKLPLTLMLVDVDHFKKINDTYGHTVG 60 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D+V+K + II +R D++AR GGEE ++ + E A LAER+RE VE+ Sbjct: 61 DEVLKKLSQIILSVVRDSDIVARYGGEEIVIITPNTTKEDAGILAERLREKVEQTKVATI 120 Query: 395 EYAIP-QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +VTISIG + + +D ALY AK+ GRN+VV+ + Sbjct: 121 ATTQEVVQVTISIGVCALSAVITDQEALLEESDQALYLAKKYGRNRVVISN 171 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 8/212 (3%) Query: 233 LYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFN 292 + L++ + + T +E+++ + + F+ + ++ A D LT + N Sbjct: 372 IIGALLVWSNHHDAYTMADLNALELLAATVAVALHNAFRFAQI---QSQAITDNLTGLAN 428 Query: 293 RNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR 350 R +F L ++ TP + ++D+DHFK++NDT+GH GD V++ + + +R Sbjct: 429 RRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTFGHIAGDYVLREIARRCRQQLR 488 Query: 351 PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV 410 D+LAR GGEEFG++L + E+A ER+R + I TISIG Sbjct: 489 DVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATTPIMIDGRQINP--TISIGVAS 546 Query: 411 TQENAL-NPNEIYRLADNALYEAKETGRNKVV 441 +P+ + AD ALY AK+ GRN+V Sbjct: 547 FHPTVYPDPSSLIADADRALYLAKQQGRNRVC 578 >UniRef50_A8IQ43 Putative diguanylate cyclase (DGC) n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IQ43_AZOC5 Length = 566 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 8/220 (3%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRV-----TKNIAHRDPLTN 289 I++L R + ++S + + + +FS K +A DPLT Sbjct: 347 KITMLPRLRGNADVMHLSYALRSLLRRLTSAETRYEMFSRKHEQDVAALKELADTDPLTG 406 Query: 290 IFNRNYFFNELTVQSASAQKT-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 + NR F V SA T +++ DIDHFK+VNDT+GH GD V+K V + ++ Sbjct: 407 LLNRRSFLAMADVALDSAHATGQLGILMADIDHFKQVNDTYGHAAGDAVLKHVADTFVRT 466 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 +R D LAR GGEEF LL D D +ALAER+RE V + AI VTISIGA Sbjct: 467 LRAHDHLARFGGEEFVALLQDTDIAGMQALAERVREAVAATKVVFEDQAIA--VTISIGA 524 Query: 409 VVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + + + +++ AD ALYEAK +GRN++V+ + Sbjct: 525 ALAHDQDRDMHKVIERADLALYEAKNSGRNRIVISPEPSL 564 >UniRef50_Q3KAB6 Putative GGDEF domain regulatory protein n=2 Tax=Pseudomonas fluorescens RepID=Q3KAB6_PSEPF Length = 559 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 8/167 (4%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 N+A D LT ++NR F +LT P+ ++++D DHFK++NDT GH G Sbjct: 385 ELLNLATHDGLTGVYNRRRFDEKLTEYSLLFRRTGRPFALLLIDADHFKRINDTHGHAAG 444 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA-KALAERIRENVERLTGDN 393 D V++ + +I SIR D +AR GGEEF VLL +I +AE+IR + Sbjct: 445 DDVLRQLAQLIQISIRSTDFVARYGGEEFAVLLPEIAKPDTPDIVAEKIRSAIAE----- 499 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 ++ VT+SIG + P + + AD LY+AK GRN+V Sbjct: 500 ADFPAVGPVTVSIGVSLADPADNTPTTLVKRADQQLYKAKAAGRNQV 546 >UniRef50_Q0A9X2 Diguanylate cyclase n=3 Tax=Proteobacteria RepID=Q0A9X2_ALHEH Length = 295 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 5/171 (2%) Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK---TPYCVMIMDIDHFKKVNDTWGHP 332 +A D LT +++R + A ++ TP +++MD+DHFK++ND +GH Sbjct: 118 EELHRLAMMDDLTGVYSRRQVLEVGERELARRRRQGLTPLTLLMMDLDHFKRINDKYGHA 177 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD 392 GD V+ ++ +++R D + R+GGEEF +L D+D + ALAERIR + L Sbjct: 178 AGDTVLVAFSEVLRRNLRESDAVGRLGGEEFLAVLPDVDLQGGLALAERIRSEIAELRIP 237 Query: 393 NPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 E AI ++T+SIG + ++ AD+ALY+AK GRN+V V Sbjct: 238 WQEEAI--RLTVSIGVAGILAVHESLDDTIMRADDALYQAKVAGRNRVTVA 286 >UniRef50_Q2L341 Putative signaling protein n=3 Tax=Bordetella RepID=Q2L341_BORA1 Length = 521 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 90/197 (45%), Gaps = 11/197 (5%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS 304 SV TWY R E + T + I + + + D LT + NR L + Sbjct: 329 SVGTWY--REAEQLK--TALATVSRKIGTKFNQLRQDSLTDALTGLLNRRGLDEILQSE- 383 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 V+ +DIDHFK +ND GH GD VI+ + ++ R D+L R+GGEEF Sbjct: 384 -PRYGRAMSVLAVDIDHFKAINDELGHAAGDAVIRGIAALLRSRARASDILGRLGGEEFV 442 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 VLL + D +A AERIR VE T+SIG V + + Sbjct: 443 VLLPNTDRAQALQAAERIRAAVETFQA-----VPGGACTVSIGVAVYPHEGASLTAVLER 497 Query: 425 ADNALYEAKETGRNKVV 441 AD ALYEAK GRN+V Sbjct: 498 ADEALYEAKRGGRNRVC 514 >UniRef50_B5W1M1 Diguanylate cyclase with PAS/PAC and GAF sensors n=4 Tax=Arthrospira RepID=B5W1M1_SPIMA Length = 1068 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 8/291 (2%) Query: 157 FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGL 216 V H L+ + +A+L+ ++ + ++ + V Sbjct: 779 IVTEDCWTPHYLAGFSQGQVQAMADLSTQDF----SQCDIRLLSEFQVQANLVVPILTRR 834 Query: 217 RYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR 276 R D + +A LL + S + S ++ + +L V + + Sbjct: 835 RSDTSAELGFVASEPYNRLWGLLMVQHCSGPRQWESTAVDFIKQLAVQLGIAIQQAELYQ 894 Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + +A D LT + NR F L + + TP +++ D+D FK NDT+GH G Sbjct: 895 QLERLATLDGLTQVPNRRQFDTYLITEWRRCIREFTPISLILCDVDFFKHYNDTYGHQEG 954 Query: 335 DQVIKTVVNIIGKSIR-PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 D+ ++ V + +SIR P DL+AR GGEEF ++L + D E +A IRE + +L + Sbjct: 955 DRCLQEVAQALTRSIRRPGDLVARYGGEEFAIILPNTDAEGMCNVAGTIREQILQLQRIH 1014 Query: 394 PEYAIPQKVTISI-GAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 I + +++S+ G V + + + +AD ALY+AK GR++ V+ Sbjct: 1015 ETSPISEYISVSMGGVSVLPNSNMQLEHLISMADTALYQAKAQGRDRFVMH 1065 >UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7C6_9DELT Length = 297 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 4/164 (2%) Query: 280 NIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 ++ D LT +FNR YF L + A P ++I DIDHFK+ NDT+GH GD V Sbjct: 133 RLSTVDGLTQVFNRRYFMETLERELSRARRYDRPLALLIFDIDHFKRCNDTYGHRAGDFV 192 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 ++ + ++ R D+++R GGEEF V+L +ID A A AE+IR+ + T Sbjct: 193 LRRIAELVTMRARKVDVVSRYGGEEFTVILPEIDIRGASAFAEKIRKLIADETFIFEGRK 252 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IP VTISIG + N +++ + AD LY AK GRN+VV Sbjct: 253 IP--VTISIGVAEIGPSVANADDMIQTADRRLYAAKTGGRNRVV 294 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 6/197 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKT 310 + VS+ + + + +L ++ + +D LT ++NR Y L + A ++ Sbjct: 929 QLARAVSEHISLALVNLQLRESL---ESQSIKDSLTGLYNRRYMEESLKREINLAQRKQH 985 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P ++++D+DHFK+ ND +GH GD ++ V N + ++R D+ R GGEEF ++L + Sbjct: 986 PVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRSGDIACRYGGEEFLLILPEA 1045 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 ++ AE+IR+ +++L A +T+SIG + + + AD ALY Sbjct: 1046 SLSDSQQRAEQIRKGIKQLNFQQYNSAFT-SLTVSIGVACFPAHGKQGETLIQSADMALY 1104 Query: 431 EAKETGRNKVVVRDVVN 447 +AK GR++VVV V+ Sbjct: 1105 QAKNQGRDRVVVFSSVS 1121 >UniRef50_C7LVZ4 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVZ4_DESBD Length = 483 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 5/171 (2%) Query: 274 ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGH 331 R TK A D LT I NR++F L + Q+ +M++D+D+FK +NDT+GH Sbjct: 304 EFRKTKARADHDGLTRISNRHHFDIRLREEMKRHQRHQDELSLMMIDLDYFKSINDTYGH 363 Query: 332 PVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTG 391 GD V++ V I+ ++R D AR GGEEF V+L ++A LAER+R + + Sbjct: 364 QAGDMVLQEVGKILNNTLRESDFPARYGGEEFVVILPQTREDQAWILAERLRSQIGQTFF 423 Query: 392 DNPEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETGRNKVV 441 + + +VT SIG + AL P + R AD ALY+AK GRN V Sbjct: 424 RSQKKRF--RVTASIGIAGIKPCALTPPETLLRNADTALYQAKTNGRNMVC 472 >UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM9_9PROT Length = 379 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 8/213 (3%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 I L M+ + + + + + +L + K + DPLT I+NR Y Sbjct: 144 IGSLNMASSTAERFTADSSTDFIERLANIFSICLENSLNHERLKLVGLTDPLTGIYNRRY 203 Query: 296 FFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 ++A ++P M +DID FK++ND++GH +GD+++ +V I +R +D Sbjct: 204 LETRCQEEAAHVRRYRSPLSCMFLDIDKFKRINDSFGHNIGDKILCSVTAQIKSQLRSND 263 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 +LAR GGEEF VLL A +AERIR V KVTISIG Sbjct: 264 VLARYGGEEFVVLLPQTGIRGACDIAERIRRTVAEQAFQIGRED-ELKVTISIGVAQAPV 322 Query: 414 NALNPN-----EIYRLADNALYEAKETGRNKVV 441 +A ++ AD ALY AKE+GRNKVV Sbjct: 323 DADGDERTVAHQLLAAADEALYLAKESGRNKVV 355 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 4/177 (2%) Query: 269 CHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVN 326 + AL+ K + + D LT IFNR YF L Q +K+ +++ D+D+FK N Sbjct: 311 IELQQALKKLKALVNLDGLTQIFNRRYFDEVLYREWQRGRREKSVISLILCDVDYFKIYN 370 Query: 327 DTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 +T+GH GD ++ V I + + RP DL+AR GGEEF +LL + D A ALAE IR Sbjct: 371 ETYGHLGGDSCLQEVAQGIRRQVKRPSDLVARYGGEEFVILLPNTDLNGALALAEMIRNA 430 Query: 386 VERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVV 441 +E + + + VTIS+G + + AD+ALY+AKE GRN V Sbjct: 431 IEAMNIPHENSLVSDHVTISMGVTSKIPQETDEYEHLIEEADDALYQAKENGRNCVC 487 >UniRef50_A0LSI3 Diguanylate cyclase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSI3_ACIC1 Length = 517 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 12/195 (6%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK- 309 + +E + T + + + + + +A D LT + NR L A A + Sbjct: 319 VVAMLERYASQTALALANSWLLEQITL---LAATDMLTGVANRRTLEENLDRMFAQASRA 375 Query: 310 -TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P V+++DIDHFK +NDT+GH VGDQ ++ V + + R DL+AR GGEEF V+L Sbjct: 376 AQPISVVMVDIDHFKHINDTFGHQVGDQTLQRVARALQQGCRSSDLVARYGGEEFVVVLP 435 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D D A AE +R + L + +VT+S+G + +P+ I AD A Sbjct: 436 DTDLAGAATAAENLRRRIFGLDAE-------PRVTVSLGVATFPLHGGSPDHILSAADAA 488 Query: 429 LYEAKETGRNKVVVR 443 LY++K GRN+V + Sbjct: 489 LYQSKSAGRNRVTLA 503 >UniRef50_Q1LHF7 Diguanylate cyclase (GGDEF domain) n=2 Tax=cellular organisms RepID=Q1LHF7_RALME Length = 587 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 11/221 (4%) Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 +S ++ W++ + V+ L V+ + H +A R + +A DPLT + NR F + Sbjct: 358 LSLPLLTIWFLLPVLMYVT-LRVVTLLFDHYLAAGRKLQQMAETDPLTQLANRRRFSEQF 416 Query: 301 TVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARV 358 ++A Q+ TP ++++DID+FK+VND WGH GD V+ + +++ K +R D AR+ Sbjct: 417 KKETARRQRDGTPLAMLMLDIDYFKRVNDKWGHASGDCVLMAMADLMRKHLREIDFPARL 476 Query: 359 GGEEFGVLLTDIDTERAKALAERIR-ENVERLTGDNPEYAIP------QKVTISIGAVVT 411 GGEEF VLL ++ A A AER+R P+ P + T+SIG Sbjct: 477 GGEEFAVLLPGASSDEAVAAAERLRLAVEAAFVEAAPDAPQPDTGDGRIRFTVSIGVAEA 536 Query: 412 -QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 + + + +AD LY AKE GRN+V D + Sbjct: 537 GTDGCQTLDAMLAVADRRLYVAKEAGRNRVCATDAPVGSAA 577 >UniRef50_Q6AMZ3 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AMZ3_DESPS Length = 330 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 8/189 (4%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCV 314 ++ T ++ I L + K A DPL +NR F + L + A+ P+ + Sbjct: 116 IIYDTTALLEAKATINEQLDIVKKQASTDPLLGCYNRKMFNDLLATEVMRANRHNHPFSL 175 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++DID+FK VNDT+GH VGD+V+K + ++ KSIR DL AR GGEEF +LL + Sbjct: 176 IMIDIDNFKSVNDTYGHLVGDEVLKGLSSLTAKSIRESDLFARWGGEEFIILLPETYLTG 235 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A +AE+IR N+ + K T S G NP + AD ALY AK Sbjct: 236 AAVVAEKIRLNIANY-----DNGTAGKRTCSFGVSEFSI-GTNPEILINNADKALYAAKG 289 Query: 435 TGRNKVVVR 443 G+N+V++ Sbjct: 290 NGKNQVMLY 298 >UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4 Tax=Cyanobacteria RepID=B0C2A7_ACAM1 Length = 368 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 6/188 (3%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVND 327 + A + +A D LT + NR F L + +K+ ++++DID+FK ND Sbjct: 173 QLEEANKRLTYLASVDELTQLPNRRAFTEALNREWRRMAREKSSLALIMIDIDYFKVYND 232 Query: 328 TWGHPVGDQVIKTVVNIIGKSIR-PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 T+GHPVGD + V +I +R P DL +R GGEEF V+L + A +AE +R +V Sbjct: 233 TYGHPVGDSCLFQVARVIHTCVRRPADLPSRYGGEEFAVILPNTTLSGAIHVAENMRLSV 292 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE---IYRLADNALYEAKETGRNKVVVR 443 +RL + A V++S+G + + AD ALY+AK GRN+V V Sbjct: 293 QRLMIPHKNSANGPYVSLSLGVASVIPDIQEMESETPLLLAADQALYKAKAEGRNRVCVD 352 Query: 444 DVVNFCES 451 ++ ES Sbjct: 353 QTLSTIES 360 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 4/198 (2%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--A 307 +I + L + +F A + K + D LT I NR F + + Sbjct: 295 FIQLIAAQLGTLMQRIKVETALFEANQKLKYLVTIDGLTGIANRRKFDQYIHREWQRLFR 354 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVL 366 ++ P +++ DID FK+ NDT+GH GD ++ V I + RP DL+AR GGEEF V+ Sbjct: 355 EQLPLSLILGDIDFFKRYNDTYGHQAGDDCLRNVATKIRLLVKRPADLVARYGGEEFAVI 414 Query: 367 LTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL-NPNEIYRLA 425 L + + + A +AE IR+ VE L + + VT+S+G N+L N + A Sbjct: 415 LPNTNAKGAIHVAETIRQGVETLKIPHGGSESSKYVTLSLGVSSLIPNSLVNVEGLINQA 474 Query: 426 DNALYEAKETGRNKVVVR 443 D ALY AK GRN+ V Sbjct: 475 DQALYRAKAGGRNQTVAE 492 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 5/184 (2%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKK 324 F+ + A +A D LT + NR + + + Q++ + +++DID FKK Sbjct: 276 FLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFKK 335 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 +NDT+GH GD V+ + + +R D++ R GGEEF +LL D A+ AE+IR Sbjct: 336 INDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIRA 395 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 I VT SIG + Q + AD ALYEAK +GRN+VV + Sbjct: 396 VTAATPIMFAGRQIA--VTTSIGISMMQ-GDETAKAMIARADAALYEAKNSGRNRVVCAE 452 Query: 445 VVNF 448 Sbjct: 453 ANEL 456 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 164/404 (40%), Gaps = 26/404 (6%) Query: 52 FIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVI-IIQQIIEERLTSSVVQN 110 I T+ + + D ++ S+ L L + + ++ IQ R + + V+N Sbjct: 145 HISTIEATLLAYFASSDPQKISDAEAHLTELKSHLASMSNIMGTIQSPTNTRFSIARVEN 204 Query: 111 DIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSS 170 + + N + + L S G I A S Sbjct: 205 ----------TLFTNIQRIRSYAY-LVNVIVPSEARELEYLASSAATEVRGEIAALQTSL 253 Query: 171 HYESYNLHIAELTNENGQVVWKA-SYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAF 229 N ++ E + ++ ++ + + L ++ F L V A Sbjct: 254 QRNRRNFYVWEFSVTVLILLLSVPVFLWTLSSVTSPLKNLAAIFRRLAAGSEESVVDAAV 313 Query: 230 C----AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCH-IFSALRVTKNIAHR 284 L+N + F ++ E+ L V + + ++A Sbjct: 314 TKDEIGDLFNAAEAFRRENIRERELLADYRELSRTLEAKVTQRTRELEAKNEELDHLASV 373 Query: 285 DPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT+ FNR L ++ A + P +++MDID FK+VND +GH GD+V+ T+ Sbjct: 374 DKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKVLVTLS 433 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 I +++R D+L R GGEEF V+ + D E+A+ +AE++R+ +E ++ + + + Sbjct: 434 QTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGT-----DFELGKTI 488 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 TISIG V E + + AD ALY+AK GRN+V + Sbjct: 489 TISIGLSVLIE-GTSAESLVAEADKALYQAKSQGRNRVCTTPIA 531 >UniRef50_Q21I36 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21I36_SACD2 Length = 434 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 7/204 (3%) Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS- 304 VS IS I + ++T M + + R K ++ RD LT+++NR F Q Sbjct: 105 VSQMIISAKIRAMERITDMRNQLATL---NRELKVLSQRDGLTHLYNRRTFEELAEKQWK 161 Query: 305 -ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEE 362 A+ K P V+++DIDHFK+ ND +GH GD+ I+T+ +++ K + RPDDL+ R GGEE Sbjct: 162 IATRNKAPLAVLLLDIDHFKQYNDYYGHQQGDRCIQTISSVLAKCVTRPDDLIGRYGGEE 221 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ-ENALNPNEI 421 F +LL + A +AE+IR++VERL + VT+SIG Sbjct: 222 FIILLPNTPENGAHYIAEQIRKSVERLQIKHRASPSNTYVTVSIGGAALNYTTGTTWAHQ 281 Query: 422 YRLADNALYEAKETGRNKVVVRDV 445 LAD ALY AK +GRN ++ Sbjct: 282 VGLADKALYTAKASGRNTSTIQSA 305 >UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geobacter RepID=Q39S35_GEOMG Length = 686 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 2/196 (1%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 + ++I + ++ DPLT ++NR + + + A Q V Sbjct: 478 TFADHASIMIERALSIERADFLEQLSITDPLTGLYNRRFLKRRMEEELARSIRQNLSLTV 537 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 M++D+D+FK ND GH GD+ +K + I+ + R D++ R GGEEF ++L + Sbjct: 538 MLIDLDNFKIYNDLCGHLAGDRALKKMARILSDTARQMDVVTRYGGEEFCIILPGTSKKE 597 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 + +AERIR +E + E ++T SIG E+ + + AD ALY AK Sbjct: 598 SLFVAERIRREIEGEEFSHEENLPQGRLTASIGVSSFPEDGNVEAVLVKAADVALYRAKS 657 Query: 435 TGRNKVVVRDVVNFCE 450 GRN+VV+ E Sbjct: 658 EGRNRVVISGPPPAEE 673 >UniRef50_Q087A8 Diguanylate cyclase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087A8_SHEFN Length = 321 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 7/189 (3%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCV 314 + L + + + + +A+ DPLT +FNR F + + A + P+ + Sbjct: 138 TLIGLIGISTDITAAYHLRSKLERLANTDPLTGLFNRRSFTSFCEHEFFRATRYFQPFSL 197 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 MI+DID FKKVNDT+GH VGD+VIK V NI + +R D+LAR+GGEEF +LL D D + Sbjct: 198 MIIDIDLFKKVNDTYGHLVGDEVIKRVANICNEHVREADVLARIGGEEFAILLPDTDIDS 257 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A LAER+RE ++ E +TISIG + EI++ AD ALY +K Sbjct: 258 AYVLAERLREAQQQY-----EEQKTPSITISIGVATLRSQDKAFLEIFKRADKALYSSKN 312 Query: 435 TGRNKVVVR 443 GRN V V Sbjct: 313 VGRNSVNVA 321 >UniRef50_B5JSK2 Response regulator receiver protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSK2_9GAMM Length = 430 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 18/328 (5%) Query: 121 MSLCILIFLALVNKVSENTKQRNLFS-KKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 ++ + +A+ + + +Q+ L + ++ F+ P + + +Y L + Sbjct: 113 FAVVSIAGIAVFSPFFVHRQQQVLLQVNLCVVHMTSLFLLIAP--DELYLHYMPAYMLVM 170 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 W+A V ++ + L +++ C +L + Sbjct: 171 MFSAVICHMFFWRAVAVGVVTAVSYNALFFL---RPQSFEVIATFNAHFLCTILITWAAS 227 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + YS ++ R I + + + + +++A DPLT ++NR Sbjct: 228 YYLEYSARRDFLQRGI--------LRLERNQLSNVNDQLQHMATTDPLTGLYNRREMERR 279 Query: 300 LTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLA 356 L + ++ VM++D+D FK ND +GH GD + + + G + R D +A Sbjct: 280 LQEEWRRGARSDHFISVMLIDVDDFKAYNDHYGHQAGDSCLTQLGTLFGGAFQRASDCVA 339 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R GGEEF VLL + D E A+ LAE++ V + ++T+SIGA Q + Sbjct: 340 RYGGEEFIVLLPETDAEAAQKLAEKLCHKVFDQRIPHTHARAADRITVSIGAATAQSHHE 399 Query: 417 -NPNEIYRLADNALYEAKETGRNKVVVR 443 + + + AD ALY+AKE GRN+VV+ Sbjct: 400 GHYEHLIKAADEALYQAKEQGRNQVVMS 427 >UniRef50_B9TNG7 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TNG7_RICCO Length = 204 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 6/186 (3%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVM 315 + + + + + R + +A DPLT IFNR F + + A+A+++ P + Sbjct: 3 FALMGSLGFVLMIKERSDREIRTLAMTDPLTKIFNRRAFMIQAEKELAAAERSGLPLAFL 62 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++DIDHFK++ND +GH GD+V+ +V ++ +R D L R GGEEF LL D + A Sbjct: 63 MLDIDHFKQINDKYGHAAGDEVLVRIVEVLSSHLRKQDTLGRYGGEEFCALLPGTDAQGA 122 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPN--EIYRLADNALYEAK 433 ALAE++R V + E ++ +T+SIG + + E+ AD ALY+AK Sbjct: 123 MALAEKLRLEVAMTRIEVEENSLG--LTLSIGGSTWEHLGPTKDYRELMEEADRALYQAK 180 Query: 434 ETGRNK 439 GRN+ Sbjct: 181 TGGRNR 186 >UniRef50_Q3A8D4 Putative sensory transduction system, regulatory protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A8D4_PELCD Length = 536 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 7/199 (3%) Query: 249 WYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SAS 306 W++SR V KL + + A R +++ D LT I NR F + L + A Sbjct: 328 WFVSRRAASVDKLVAQRTY--ELDEANRRLASLSLTDGLTGIANRRSFDDHLAQEWKRAL 385 Query: 307 AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGV 365 + P ++++DIDHFK ND +GH GD ++ V ++ + RP DL+AR GGEEF + Sbjct: 386 RDRHPLSLIMVDIDHFKAYNDYYGHLAGDDCLRQVARMLQSVVARPGDLVARYGGEEFAL 445 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRL 424 +L D AK+L E R V + + VT+S+G + +P+++ + Sbjct: 446 ILPQTD-HGAKSLGESCRAAVAGGKIPHHASPVKPVVTVSVGVATMIPHVEDDPSQLIKA 504 Query: 425 ADNALYEAKETGRNKVVVR 443 AD A+Y AK GR+ VVV Sbjct: 505 ADQAMYRAKLLGRDHVVVE 523 >UniRef50_Q2IZF7 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IZF7_RHOP2 Length = 753 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 19/238 (7%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 G+T ++ + L + + ++ R V ++ ++ +A Sbjct: 510 VAGITASRLLGIIITLQLALTALF----YFFGRERGVRDRVQQLLRSELQERAA--ALAR 563 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 A DPLT + NR F L + A ++T P +++ D+DHFK+VND +GHP GDQV+ Sbjct: 564 QATTDPLTGLHNRLRFNEGLAQELARVRRTGQPLSLVMFDVDHFKEVNDRYGHPTGDQVL 623 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 + +R DLLAR GGEEF +LL D D A +AE +R V R D Sbjct: 624 IRLSQTAAAQLRQTDLLARWGGEEFAILLVDADLHAAVEVAENLRRLVARTPFDQIG--- 680 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV-----VVRDVVNFCES 451 VT S G + + + + + AD ALY AK GRN+V V+ + V + Sbjct: 681 --SVTASFGVAECRPD-ESADSLLERADAALYRAKSNGRNRVEIDAPVIEETVALSPA 735 >UniRef50_Q2BLE7 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE7_9GAMM Length = 444 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 6/210 (2%) Query: 238 LLFMSRYSVSTWYISRT--IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + +S + +Y S+ + + LT + + A + + +AH D +T + NR Sbjct: 236 VFHLSLNARQIFYNSKAAILATFTDLTQQMQHNYRLEEARQKAERLAHTDVMTGLDNRRS 295 Query: 296 FFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 + + ++ + C +++DID+FKK+NDTWGH +GD IK V +++ +SIR D Sbjct: 296 LYQKCDEILKFLNRSTDHLCAVVIDIDYFKKINDTWGHNIGDHAIKLVGDLLKQSIRRTD 355 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 + AR GGEEF ++L + D +A AE++R +E + + +I +T S G Sbjct: 356 IAARYGGEEFALILPNTDLHQAYKFAEKVRLRIEEMVIETENESID--LTASFGVATYNA 413 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVR 443 + ++ AD ALY AK GRN V + Sbjct: 414 SMNEVGDLLNAADIALYSAKRAGRNCVKIA 443 >UniRef50_A3DEY5 Diguanylate cyclase with GAF sensor n=2 Tax=Clostridium thermocellum RepID=A3DEY5_CLOTH Length = 550 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 7/192 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT-- 310 R + ++ + + + ++ + +A D LT I+NR YF L + A+A+K Sbjct: 362 RLLNIIGQQVGIAMENVELYQRM---HEMATIDSLTGIYNRLYFQERLREEFANAKKENY 418 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 + IMDIDHFK+ NDT+GH GD+V+K + +++ KS+R D++AR GGEEF +LL Sbjct: 419 DLSLAIMDIDHFKRFNDTFGHLFGDKVLKHIAHLMKKSLRSGDIIARYGGEEFVILLPRT 478 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 + A ER+R V + T + + VT+S G E A +E+ + ADNALY Sbjct: 479 SVKEAYDKVERLRNIVAKTTIK--DELVEASVTVSFGVSSYPEFANTESELLKTADNALY 536 Query: 431 EAKETGRNKVVV 442 +AKE+GRN V + Sbjct: 537 DAKESGRNCVRI 548 >UniRef50_C8Q4F0 Diguanylate cyclase n=5 Tax=Enterobacteriaceae RepID=C8Q4F0_9ENTR Length = 570 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 100/197 (50%), Gaps = 11/197 (5%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS 304 + WY + LT + + + + K+ DP+TN+ NR L Sbjct: 372 GIRAWYFEAAQVKRAMLTGIGL----VQDKIGRLKSEVQTDPMTNLLNRRGLGAVLDYFH 427 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFG 364 A Q P+ V+ +DIDHFK+VND +GH VGD+VIK V + S R D++ R GGEEF Sbjct: 428 AMRQ--PFAVLALDIDHFKRVNDNFGHDVGDEVIKKVAQALRNSARQTDVVCRNGGEEFL 485 Query: 365 VLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRL 424 +LL E A+ LAER+R+N+ D +TIS+G + Q + + Sbjct: 486 MLLPGTPAEEARHLAERLRKNIADNWIDK-----VGNITISVGIALWQPEKGTQEQSLKQ 540 Query: 425 ADNALYEAKETGRNKVV 441 AD ALY+AK GRN V+ Sbjct: 541 ADAALYQAKNAGRNCVM 557 >UniRef50_Q2RNX7 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RNX7_RHORT Length = 492 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 7/195 (3%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRV---TKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT 310 + + +V + I R+ + +A DPLT NR F A AQ+ Sbjct: 300 LTDAAGQAVGLVAVITDITEQKRMEEALRRLATTDPLTGALNRRAFMEAARRDLALAQRH 359 Query: 311 --PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P V + DIDHFK+VND GH GD+ +KT V + ++R D+L R+GGEEF ++L Sbjct: 360 GEPVTVALADIDHFKRVNDQHGHATGDEALKTFVATVHGALRASDVLGRMGGEEFALILP 419 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 A LA+R+R+ + L P + + T+SIG + + + + AD A Sbjct: 420 HTALASAMLLADRLRQTLANLRVPCPSGEV--EFTVSIGLAELGTHGTTIDTLLQAADEA 477 Query: 429 LYEAKETGRNKVVVR 443 LY AK GRN+V+ Sbjct: 478 LYRAKSAGRNRVIAA 492 >UniRef50_C8X290 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X290_DESRD Length = 769 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 67/167 (40%), Positives = 95/167 (56%), Gaps = 4/167 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + +A RD LT ++NR YFF ++SA K P +++ DIDHFK++NDT+GH +G Sbjct: 598 KLRELATRDSLTGVWNRRYFFELAARELESAQRYKHPLSLILYDIDHFKRINDTYGHMIG 657 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D+V++ + ++G ++R DLLARVGGEEF VLL E+A +A RI V Sbjct: 658 DEVLRQLTQLVGANLRNVDLLARVGGEEFAVLLPHTYLEQAHTVARRILRGVNEAVIRTE 717 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 A P ++TISIG + + AD ALY AK GRN + Sbjct: 718 --AGPLQLTISIGMSSSAHADNCLESLIHDADQALYAAKNKGRNSIC 762 >UniRef50_C8QXT9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXT9_9DELT Length = 337 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 4/224 (1%) Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIF 291 +L + +F+ ++ E+ K+ ++ + A ++ D LT + Sbjct: 114 ILRSKVEIFLQLDRQQRLLAQKSAELDRKVRELLGVKSQLEEANARLNELSLTDALTGLA 173 Query: 292 NRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR F + + A + P +++ DID FK+ ND +GH VGD+ + + +I + Sbjct: 174 NRRCFQETIHTEWRRAMRNRHPLTLVLGDIDSFKQFNDNFGHLVGDECLVRIAAVIRSPL 233 Query: 350 -RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 RP DL AR GGEEF +LL + D E + LAE +R+ VE+++ ++PE ++T+S G Sbjct: 234 MRPSDLAARFGGEEFVILLPETDLEGGRHLAETVRQEVEKMSVEHPESGTRLQLTMSFGV 293 Query: 409 -VVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 V + + ++ AD ALY AKE GRN+V V+ F +S Sbjct: 294 SSVVPQPEFSEQDLICAADKALYVAKEGGRNRVQVQGPRAFVKS 337 >UniRef50_Q7P127 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P127_CHRVO Length = 334 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 15/212 (7%) Query: 245 SVSTWYISRTIEVVSKLTVMVIFMCHIFSALRV-----------TKNIAHRDPLTNIFNR 293 S TWY+ + +S+ + + +ALR + A RDPLT +FNR Sbjct: 117 SGETWYVINGVNDISERKRLEQSLQDANAALRSHLREIELLQQGLREQALRDPLTGLFNR 176 Query: 294 NYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 + + L A A V+++D DHFK++NDT+GH GD V+ + + R Sbjct: 177 RHLDDILPRVLAHMLALHREVAVLMVDADHFKRINDTYGHRCGDAVLTALGACLSDHFRS 236 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D++ R GGEEF VLL E A A AE +R V + +++ VT+SIG + Sbjct: 237 GDIVCRYGGEEFFVLLPGATLEAAYAKAEGLRRAVGERPMEALGHSLA--VTLSIGLALC 294 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + + + R AD ALY+AK GR++V V Sbjct: 295 PLHGSDAESVVRAADEALYQAKRQGRDRVCVA 326 >UniRef50_C1DGF8 GGDEF protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGF8_AZOVD Length = 318 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 4/188 (2%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQSASAQKTPY 312 IE+ + +T + +A + +AH D LT + NR FF + A+ P Sbjct: 128 IEIATDITERKRIEEELAAAKHQAEALAHVDELTGLNNRRAFFQLGLQAFRQAARAAGPI 187 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 V++ D+DHFK++ND GH VGD+V+ V N + IR D+ R+GGEEF ++L + Sbjct: 188 AVIMFDLDHFKQINDAHGHLVGDKVLVAVANGMRSQIREADIAGRLGGEEFALILPETTL 247 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 A AER+R + + +I + T S G V ++ +L+ + LAD LY+A Sbjct: 248 SEALTAAERLRGVIAATRLAHG--SIHIQCTSSFGVAVCEDGSLDLEHMLSLADAGLYKA 305 Query: 433 KETGRNKV 440 K GRN+V Sbjct: 306 KRNGRNRV 313 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMI 316 KL I + ++ D LT +NR YF L + A++T P+ +++ Sbjct: 482 EKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIM 541 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 +DIDHFK VND +GH GD V+KT+ N+I IR D LAR GGEEF +LL + E+A Sbjct: 542 LDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAA 601 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 LAE +RE + L +VT S G + + AD LY AK +G Sbjct: 602 GLAEELREQLSMLEIPG-----VGRVTASFGVTGYCPGD-TLDTLLMRADQMLYTAKASG 655 Query: 437 RNKVVVRD 444 RN V + Sbjct: 656 RNCVRFSE 663 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 167/367 (45%), Gaps = 30/367 (8%) Query: 99 IEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFV 158 I + + + DI L S IL +AL + K+ ++ + F V Sbjct: 2 INTNGKNLIEETDIDKIRLI--YSFTILGTIALYTFSF-----IHFIGKEYSIALFEFIV 54 Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIF---------MWLTLLSV 209 G ++ IL + + +AE N ++ +T +I W+ + Sbjct: 55 ATGAVLNLILLKVSDGKLIRVAE----NFILIGMIILLTGIIIHGGIANTAIYWIYTYPL 110 Query: 210 NLYFN-GLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV-IF 267 +F G R ++ +T+I +L ++ L + S I + + + V+ +F Sbjct: 111 LSFFLKGNRVGLFWNITLIVVIVILAVLNKLNIVPIPYSPDEIRQALSAYVVIMVLAYVF 170 Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKV 325 + S+ K +A DPLT FNR F +L ++ + +++ DID+FK + Sbjct: 171 ESALLSSYEKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSI 230 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 NDT+GH +GDQV+K ++ I IR D L R GGEEF ++ I+ E A+ +AE+IR+ Sbjct: 231 NDTYGHNIGDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKL 290 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 V+ + + ++TIS+G + + + + AD ALY AK+ G+N+V + Sbjct: 291 VKDIKVEGI-----PEITISVGVAEYFPD-ESITDFIKKADIALYSAKKKGKNRVEIYSS 344 Query: 446 VNFCESP 452 N C P Sbjct: 345 ENVCLIP 351 >UniRef50_C4XGF2 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGF2_DESMR Length = 687 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 6/193 (3%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT-- 310 R + +TV + + + R + ++ DPLT I NR F + A +T Sbjct: 341 RVVVAHEDITVRKLMEIALAESNRKLEALSATDPLTGIANRRRFDEAFAGEYARHARTGA 400 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTD 369 P ++++DID+FK ND +GH GD + V + + RP DL AR GGEEF LL D Sbjct: 401 PLSLVMLDIDYFKNFNDAYGHAQGDACLAAVARAMAGCLQRPGDLAARYGGEEFICLLPD 460 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA--VVTQENALNPNEIYRLADN 427 + +AE IRE V L + + VT+SIGA +A +P +++R D Sbjct: 461 TSPRGTRTVAESIREAVAALAIPHARSSAAAVVTVSIGALTAACPPDA-DPGDLFRQVDA 519 Query: 428 ALYEAKETGRNKV 440 LY+AKE GRN+V Sbjct: 520 LLYKAKENGRNRV 532 >UniRef50_C6BSH8 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSH8_DESAD Length = 283 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 121/236 (51%), Gaps = 10/236 (4%) Query: 218 YDIWNGVTVIAFC-AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR 276 ++ G+ V+ C + + R+ ++ W V M + H+ S L+ Sbjct: 34 HECPEGLAVLRLCPGMTLKAWEILAERHGLNDWM------TVPLDRNMAPHLNHVQSVLQ 87 Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 DPLT + NR F L ++ KTP + I+D+D+FKK+NDTWGH G Sbjct: 88 ELSYKTEHDPLTGLSNRRVFERTLDQEIERTRRSKTPLTLAILDLDNFKKINDTWGHLKG 147 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D+V+ +++ ++ R DL+AR+GGEEF ++L+ + +AK L ER+ + V LT P Sbjct: 148 DEVLIDFADLLSQNSRRYDLVARIGGEEFAIILSGVGLVKAKQLLERLLDKVRGLTFAKP 207 Query: 395 EYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFC 449 +T S G + + +E+ AD ALYEAKE+G+++V D+++F Sbjct: 208 GSNETFSITCSAGISCFKGMVEVEMHELISKADKALYEAKESGKDQVCSADILDFE 263 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75908 Inner membrane protein ycdT n=43 Tax=Enterobacte... 461 e-128 UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter ... 376 e-103 UniRef50_UPI0001C3436F predicted diguanylate cyclase n=1 Tax=Cit... 376 e-103 UniRef50_P76236 Inner membrane protein yeaI n=57 Tax=Enterobacte... 359 2e-97 UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 T... 354 5e-96 UniRef50_D0YJ51 Diguanylate cyclase n=1 Tax=Klebsiella variicola... 350 9e-95 UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 T... 343 7e-93 UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638... 338 3e-91 UniRef50_UPI0001C34201 diguanylate cyclase n=1 Tax=Enterobacter ... 334 3e-90 UniRef50_C1M4A3 Diguanylate cyclase n=1 Tax=Citrobacter sp. 30_2... 331 4e-89 UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis ... 301 5e-80 UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica R... 291 4e-77 UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae R... 288 2e-76 UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp.... 288 3e-76 UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 286 2e-75 UniRef50_D0ZCJ5 Diguanylate cyclase n=1 Tax=Edwardsiella tarda E... 283 9e-75 UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 281 5e-74 UniRef50_B1XII1 PleD protein n=3 Tax=Bacteria RepID=B1XII1_SYNP2 278 2e-73 UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 273 7e-72 UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n... 271 4e-71 UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alterom... 270 7e-71 UniRef50_UPI0001C3940A response regulator receiver modulated dig... 270 8e-71 UniRef50_B9Z462 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 269 1e-70 UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 68... 269 1e-70 UniRef50_D1UJZ5 Diguanylate cyclase n=6 Tax=Burkholderiaceae Rep... 267 5e-70 UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingraha... 267 8e-70 UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya... 266 1e-69 UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 266 2e-69 UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 265 2e-69 UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 265 3e-69 UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammap... 264 5e-69 UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0... 263 1e-68 UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthono... 263 1e-68 UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geob... 262 2e-68 UniRef50_B5JSK2 Response regulator receiver protein n=1 Tax=gamm... 262 2e-68 UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q... 262 2e-68 UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus... 262 2e-68 UniRef50_Q2BQL8 Probable two-component response regulator n=1 Ta... 261 3e-68 UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafield... 261 4e-68 UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 68... 261 4e-68 UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 261 4e-68 UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthono... 261 5e-68 UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnet... 260 7e-68 UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32... 260 1e-67 UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfu... 260 1e-67 UniRef50_Q0EXC8 Signal transduction protein containing a membran... 259 1e-67 UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geob... 259 1e-67 UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID... 259 1e-67 UniRef50_B2V556 Ggdef/hd domain protein n=23 Tax=Clostridium Rep... 259 2e-67 UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplast... 259 2e-67 UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors... 259 2e-67 UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3... 259 2e-67 UniRef50_A0YVI7 Regulatory components of sensory transduction sy... 259 2e-67 UniRef50_Q21JG3 GGDEF domain n=1 Tax=Saccharophagus degradans 2-... 259 2e-67 UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 259 2e-67 UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0... 258 4e-67 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 257 5e-67 UniRef50_A1WTZ7 Response regulator receiver modulated diguanylat... 257 5e-67 UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 257 5e-67 UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms R... 257 7e-67 UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4... 257 7e-67 UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus... 257 8e-67 UniRef50_B5VVN4 Response regulator receiver modulated diguanylat... 257 9e-67 UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 257 9e-67 UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curviba... 256 9e-67 UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 256 1e-66 UniRef50_B5W1M1 Diguanylate cyclase with PAS/PAC and GAF sensors... 256 1e-66 UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reineke... 256 1e-66 UniRef50_B8FCK6 Response regulator receiver modulated diguanylat... 256 1e-66 UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 256 1e-66 UniRef50_Q2RR54 Putative diguanylate cyclase (GGDEF domain) n=2 ... 256 1e-66 UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece ... 256 1e-66 UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferriredu... 256 1e-66 UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID... 256 2e-66 UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors... 256 2e-66 UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 256 2e-66 UniRef50_A8UWP4 Response regulator containing a CheY-like receiv... 256 2e-66 UniRef50_Q2BMK3 Serine/threonine kinase with two-component senso... 256 2e-66 UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta ... 256 2e-66 UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geob... 255 2e-66 UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoe... 255 2e-66 UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxyd... 255 3e-66 UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID... 255 3e-66 UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiv... 255 3e-66 UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 255 3e-66 UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein... 254 4e-66 UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 ... 254 4e-66 UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 4e-66 UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1T... 254 4e-66 UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas pal... 254 5e-66 UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms R... 254 5e-66 UniRef50_Q39ZK6 Response regulator receiver modulated diguanylat... 254 5e-66 UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 6e-66 UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacte... 254 6e-66 UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flag... 254 6e-66 UniRef50_B1LBA3 Diguanylate cyclase and serine/threonine protein... 254 6e-66 UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 7e-66 UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 254 7e-66 UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 254 7e-66 UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Sh... 253 8e-66 UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Berma... 253 8e-66 UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptu... 253 8e-66 UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromat... 253 9e-66 UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydro... 253 1e-65 UniRef50_C1A5L7 Putative two-component response regulator n=1 Ta... 253 1e-65 UniRef50_C8QXT9 Response regulator receiver modulated diguanylat... 253 1e-65 UniRef50_Q47V47 GGDEF domain protein n=1 Tax=Colwellia psychrery... 253 1e-65 UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7Q... 253 1e-65 UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 T... 253 1e-65 UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrery... 253 1e-65 UniRef50_B4SMP5 Diguanylate cyclase n=3 Tax=Stenotrophomonas Rep... 253 1e-65 UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 253 1e-65 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 252 1e-65 UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas camp... 252 2e-65 UniRef50_Q2W1M0 Response regulator containing a CheY-like receiv... 252 2e-65 UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthom... 252 2e-65 UniRef50_C7LSD5 Response regulator receiver modulated diguanylat... 252 2e-65 UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii ... 252 2e-65 UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legione... 252 2e-65 UniRef50_Q21HV6 Response regulator receiver modulated diguanylat... 251 3e-65 UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacte... 251 3e-65 UniRef50_Q2IXE2 Response regulator receiver modulated diguanylat... 251 4e-65 UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desu... 251 4e-65 UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors... 251 4e-65 UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepI... 251 4e-65 UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium bac... 251 4e-65 UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W... 251 4e-65 UniRef50_Q1Q3F0 Putative uncharacterized protein n=1 Tax=Candida... 251 5e-65 UniRef50_A4BIU7 Response regulator containing a CheY-like receiv... 251 5e-65 UniRef50_Q2VZ27 Response regulator containing a CheY-like receiv... 251 5e-65 UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=... 251 6e-65 UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 251 6e-65 UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobact... 250 7e-65 UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID... 250 7e-65 UniRef50_B7K319 Response regulator receiver modulated diguanylat... 250 7e-65 UniRef50_Q3A8D4 Putative sensory transduction system, regulatory... 250 8e-65 UniRef50_C7R6L5 Diguanylate cyclase n=4 Tax=Gammaproteobacteria ... 250 8e-65 UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas Rep... 250 8e-65 UniRef50_Q04S93 GGDEF domain receiver component of a two-compone... 250 8e-65 UniRef50_C6MLA7 Response regulator receiver modulated diguanylat... 250 9e-65 UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepI... 250 9e-65 UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 250 9e-65 UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovo... 250 1e-64 UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors... 250 1e-64 UniRef50_B2A6L1 Response regulator receiver modulated diguanylat... 250 1e-64 UniRef50_B5VWD6 Diguanylate cyclase n=2 Tax=Arthrospira RepID=B5... 249 1e-64 UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longb... 249 1e-64 UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 249 1e-64 UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thala... 249 1e-64 UniRef50_C0QQU4 Response regulator receiver modulated diguanylat... 249 2e-64 UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas ... 249 2e-64 UniRef50_B7K273 Response regulator receiver modulated diguanylat... 249 2e-64 UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (... 249 2e-64 UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 2e-64 UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiob... 249 2e-64 UniRef50_Q2SPL3 Response regulator containing a CheY-like receiv... 249 2e-64 UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 ... 248 3e-64 UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 R... 248 3e-64 UniRef50_B2HWF7 GGDEF domain protein n=12 Tax=Acinetobacter RepI... 248 3e-64 UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthono... 248 3e-64 UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgar... 248 3e-64 UniRef50_B0C721 EAL domain protein n=5 Tax=Acaryochloris marina ... 248 3e-64 UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 248 4e-64 UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromob... 248 4e-64 UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliob... 248 4e-64 UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with... 248 4e-64 UniRef50_Q48HP3 GGDEF domain protein n=6 Tax=Pseudomonas syringa... 248 4e-64 UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepI... 248 4e-64 UniRef50_Q0F205 Response regulator containing a CheY-like receiv... 247 4e-64 UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromato... 247 5e-64 UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacte... 247 5e-64 UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeol... 247 5e-64 UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desul... 247 5e-64 UniRef50_Q2IF81 Response regulator receiver modulated diguanylat... 247 5e-64 UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC ... 247 5e-64 UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 247 5e-64 UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 247 5e-64 UniRef50_C6XL77 Response regulator receiver modulated diguanylat... 247 6e-64 UniRef50_Q1Z0H7 Putative uncharacterized protein n=2 Tax=Photoba... 247 6e-64 UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC... 247 6e-64 UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desu... 247 6e-64 UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF dom... 247 7e-64 UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelo... 247 8e-64 UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepI... 247 8e-64 UniRef50_Q3JE99 Response regulator receiver modulated diguanylat... 247 9e-64 UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=... 247 9e-64 UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magne... 247 9e-64 UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GC... 246 9e-64 UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors... 246 9e-64 UniRef50_Q0A9X2 Diguanylate cyclase n=3 Tax=Proteobacteria RepID... 246 1e-63 UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clos... 246 1e-63 UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter sal... 246 1e-63 UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydroge... 246 1e-63 UniRef50_B3PKF1 Response regulator n=1 Tax=Cellvibrio japonicus ... 246 1e-63 UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkonge... 246 1e-63 UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ... 246 1e-63 UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnic... 246 1e-63 UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocy... 246 1e-63 UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 246 1e-63 UniRef50_C6MHA0 Periplasmic/7TM domain sensor diguanylate cyclas... 246 2e-63 UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerob... 246 2e-63 UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum... 246 2e-63 UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=De... 246 2e-63 UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotr... 246 2e-63 UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobac... 246 2e-63 UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A... 246 2e-63 UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 246 2e-63 UniRef50_B5JWA7 Diguanylate cyclase n=1 Tax=gamma proteobacteriu... 246 2e-63 UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms ... 246 2e-63 UniRef50_B8FHG3 Response regulator receiver modulated diguanylat... 246 2e-63 UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 246 2e-63 UniRef50_B3QHH6 Diguanylate cyclase n=3 Tax=Rhodopseudomonas pal... 246 2e-63 UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas aceto... 246 2e-63 UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswal... 245 2e-63 UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acid... 245 2e-63 UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Rose... 245 2e-63 UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammapr... 245 3e-63 UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter Rep... 245 3e-63 UniRef50_Q0VMN2 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q... 245 3e-63 UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caes... 245 3e-63 UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesi... 245 3e-63 UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 245 3e-63 UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alka... 244 4e-63 UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexi... 244 4e-63 UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydroge... 244 5e-63 UniRef50_Q2SNU2 Response regulator containing a CheY-like receiv... 244 5e-63 UniRef50_Q31LE3 Diguanylate cyclase with GAF sensor n=2 Tax=Syne... 244 5e-63 UniRef50_C1DFX7 Transmembrane protein with C-terminal GGDEF moti... 244 5e-63 UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluores... 244 6e-63 UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Breviba... 244 6e-63 UniRef50_Q2SP63 Response regulator containing a CheY-like receiv... 244 6e-63 UniRef50_A6VYW5 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL... 244 6e-63 UniRef50_C4KD29 Response regulator receiver modulated diguanylat... 244 7e-63 UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrery... 244 7e-63 UniRef50_Q31GR6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiom... 244 7e-63 Sequences not found previously or not previously below threshold: UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 T... 252 2e-65 UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pel... 251 5e-65 UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 249 1e-64 UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae su... 247 5e-64 UniRef50_B7JW72 Diguanylate cyclase n=5 Tax=Chroococcales RepID=... 247 5e-64 UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=... 247 8e-64 UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodi... 246 1e-63 UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors... 245 2e-63 UniRef50_Q47I66 Response regulator receiver modulated diguanylat... 245 3e-63 UniRef50_Q4C2G9 GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepI... 244 4e-63 UniRef50_Q6ARI2 Probable sensory transduction system regulatory ... 244 5e-63 UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A... 244 6e-63 >UniRef50_P75908 Inner membrane protein ycdT n=43 Tax=Enterobacteriaceae RepID=YCDT_ECOLI Length = 452 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 452/452 (100%), Positives = 452/452 (100%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF Sbjct: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ Sbjct: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA Sbjct: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF Sbjct: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL Sbjct: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG Sbjct: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE Sbjct: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 Query: 421 IYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 IYRLADNALYEAKETGRNKVVVRDVVNFCESP Sbjct: 421 IYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 >UniRef50_C1M322 Inner membrane protein yeaI n=1 Tax=Citrobacter sp. 30_2 RepID=C1M322_9ENTR Length = 473 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 149/441 (33%), Positives = 244/441 (55%), Gaps = 7/441 (1%) Query: 4 DYLRISSTVLVSL-LFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQ 62 + R+ + ++ L + L V + + + VP++ YL++++ LFF+ + F+FM Sbjct: 37 NNRRLMAFYIICLASYVLGGVCLTQF---KLTIQSVPQTVYLIIIVGLFFLYGIIFLFML 93 Query: 63 LYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMS 122 ++ + +L +AFL I+F+ T+ I+Q +I + + NDIAI+Y FRQ+S Sbjct: 94 FQYLCRKDLTCLMILGMAFLGNNIFFIETIYIVQDLINDYASIEKRTNDIAIFYYFRQIS 153 Query: 123 LCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAEL 182 L+F++L + +T + + +S + +VAH L+S+ ++ L I L Sbjct: 154 FIALLFVSLKSYKVSSTVIETKEREPCYIVLSFLIMLVIAVVAHALASYNPNFTLEITSL 213 Query: 183 TNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMS 242 +N V W Y+ +I W +L + +W + ++ A+L N+ LL + Sbjct: 214 KPDNVTVHWHIGYIYSLIVSWGLVLLYLIIKTRTHNILWKSIGLLCCSAILTNVLLLSLD 273 Query: 243 RYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV 302 YS+ WY+SR IEV+S L ++ I M + F L+ + A +D +T I+NR F+ L Sbjct: 274 EYSMYIWYVSRGIEVISALCIISILMYNTFIILKKETDSAIKDAMTKIYNRKLFYKSLKS 333 Query: 303 QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEE 362 A CVM++DID FK++NDT+GH GD+VI ++V+I+ KSIR D+ ARVGGEE Sbjct: 334 SLAK---GTVCVMVLDIDKFKRINDTYGHQEGDRVIISIVDIVNKSIRDTDIFARVGGEE 390 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIY 422 F +LL D + A +AERIR NVE T Y + +K+TISIG ++ + + +++ Sbjct: 391 FAILLKCNDKDEAIVVAERIRRNVENGTTIPNSYNLKEKMTISIGVYCSKIDDESADKVV 450 Query: 423 RLADNALYEAKETGRNKVVVR 443 AD ALYEAK +GRNKV Sbjct: 451 SYADAALYEAKNSGRNKVCYY 471 >UniRef50_UPI0001C3436F predicted diguanylate cyclase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C3436F Length = 443 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 148/443 (33%), Positives = 242/443 (54%), Gaps = 7/443 (1%) Query: 3 KDYLRISSTVLVSLL-FGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFM 61 + ++ + + L+ + L + + + + VP++ YL++++ LFF+ + F+FM Sbjct: 6 TNNRKLMAFYITCLVSYILGGLCLTQF---KLTIQSVPQTIYLIIIVGLFFLYGIIFLFM 62 Query: 62 QLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQM 121 ++ + +L +AFLS I+FV T+ I+Q +I + + NDIAI+Y FRQ+ Sbjct: 63 LFQYLCRKDLTCLMILGMAFLSNNIFFVETIYIVQDLINDHTSIEKRTNDIAIFYYFRQL 122 Query: 122 SLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAE 181 S L+F+ L + + +T + + ++ F + ++AH L+S+ L I Sbjct: 123 SFIALLFVCLKSYKTSSTIIETKEREPCYIAVAFFIMLAIAVLAHSLASYNPGMTLEITS 182 Query: 182 LTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFM 241 L +N V W Y+ +I W +L + +W + ++ +L N+ LL + Sbjct: 183 LKPDNVTVHWHIGYIYSLIVAWGLVLLYLVIKTKTHNILWKSIGLLCCSGILTNVLLLSL 242 Query: 242 SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT 301 YS+ WYISR IEV+S L ++ I M + F L+ + A +D +T I+NR F+ L Sbjct: 243 DEYSMYIWYISRGIEVISTLCIISILMYNTFIILKKETDSAIKDAMTKIYNRKLFYRTLK 302 Query: 302 VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGE 361 AS K CVM++DID FK++NDT+GH GD+VI ++V+II SIR D+ AR+GGE Sbjct: 303 ---ASLTKGAVCVMVLDIDKFKRINDTYGHQEGDRVIISIVDIINNSIRDTDIFARIGGE 359 Query: 362 EFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEI 421 EF +LL D + A +AERIR NVE T Y + +K+TISIG + + +++ Sbjct: 360 EFAILLKCKDKDEAIVVAERIRRNVENGTTLPNAYDLKEKMTISIGVYCSNATDESADKV 419 Query: 422 YRLADNALYEAKETGRNKVVVRD 444 AD ALY+AK +GRNKV Sbjct: 420 VSYADAALYDAKNSGRNKVCYYS 442 >UniRef50_P76236 Inner membrane protein yeaI n=57 Tax=Enterobacteriaceae RepID=YEAI_ECOLI Length = 491 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 168/446 (37%), Positives = 269/446 (60%), Gaps = 3/446 (0%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 M L+ S + SLL L L + + +N+ +++P+ YLMV++ALFF++ V F+F Sbjct: 48 MGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLF 107 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 M + + +++ +LSLAFLS LIY V T++II + I ND++I+Y+FRQ Sbjct: 108 MLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQ 167 Query: 121 MSLCILIFLALVNKVSENTKQRNLFS-KKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 +S L LAL +N N + L + F VF P++AH LSS+ Y+L++ Sbjct: 168 LSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVF--PLLAHNLSSYNADYSLYV 225 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 + +N W +Y I++ +W LL + L ++W + ++ ++ N+ LL Sbjct: 226 VDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLL 285 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + Y+ + WYISR IEV SKL V+ + +IF L+++ +A D LTNI+NR YFFN Sbjct: 286 TLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNS 345 Query: 300 LTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVG 359 + + +CVM++DI+ FK++N WGH VGD+V+ ++V+II +SIRPDD+LAR+ Sbjct: 346 VESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLE 405 Query: 360 GEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPN 419 GE FG+L T++++ +AK +AER+R+NVE LTG + Y +P+++TISIG V + + N + Sbjct: 406 GEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNIS 465 Query: 420 EIYRLADNALYEAKETGRNKVVVRDV 445 + AD AL EAK G NKV++ + Sbjct: 466 LVMTEADKALREAKSEGGNKVIIHHI 491 >UniRef50_B5XWN5 Diguanylate cyclase (GGDEF) domain protein n=5 Tax=Klebsiella RepID=B5XWN5_KLEP3 Length = 453 Score = 354 bits (908), Expect = 5e-96, Method: Composition-based stats. Identities = 113/449 (25%), Positives = 211/449 (46%), Gaps = 15/449 (3%) Query: 7 RISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFI 66 R V + LL G + V ++F+ L + +F I FM + + Sbjct: 11 RFIIYVFICLLAGFGIAGVTAFFHTSFSTTSSILFPLLTSFLMVFHI--TIACFMGMKYW 68 Query: 67 YDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCIL 126 ++R+ ++ F + + T+ + T + QND IYY FR + + +L Sbjct: 69 SNKRRLYLTPVAFGFACSALLMLGTLSSYPDWLTCSTTPVINQNDAVIYYFFRNIMMAVL 128 Query: 127 IFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNEN 186 ++V +L + +T + F ++ + SSH +++ + + Sbjct: 129 FMSSIVLYYFRQRIMHSLKAHIITFAACIVFTLTIIFLSWVYSSHSPWLSVNFIDDLSHT 188 Query: 187 GQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSV 246 +W++ +++ +W L + + + LR W + L+ + Sbjct: 189 FTPLWQSIIGWLLMAIWFITLILLISLSKLRNIFWFSGAFFCSAYLYTLFQLVSTAGDLD 248 Query: 247 STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI-------AHRDPLTNIFNRNYFFNE 299 TWY +R E + L ++++ + +F R + + + RDPLT ++NR++F++ Sbjct: 249 QTWYQARFFETLCTLFLILVLLIDVFMLYRESNHKYVHSYQNSIRDPLTRLYNRSFFYDT 308 Query: 300 LTVQSASAQ-KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARV 358 L Q A + P V+I D+DHFK++ND +GH GD+VI+ +++ R DD AR+ Sbjct: 309 LNQQLAKVNPQHPLSVIISDLDHFKRINDNYGHVAGDKVIQFAASVLENHSRVDDAAARI 368 Query: 359 GGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNP 418 GGEEF +LL + + A A+AERIR V + ++ +P+++TIS+G T++ +++ Sbjct: 369 GGEEFALLLVNTAEKDALAIAERIRLAV-----NAEQHPLPERMTISMGLYTTRDRSVSA 423 Query: 419 NEIYRLADNALYEAKETGRNKVVVRDVVN 447 AD A+YEAK +GRN+VVV Sbjct: 424 ETCVERADAAMYEAKNSGRNRVVVWRHPG 452 >UniRef50_D0YJ51 Diguanylate cyclase n=1 Tax=Klebsiella variicola At-22 RepID=D0YJ51_KLEVA Length = 452 Score = 350 bits (897), Expect = 9e-95, Method: Composition-based stats. Identities = 167/445 (37%), Positives = 263/445 (59%), Gaps = 2/445 (0%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF 60 ME Y +++ V + ++ L L+ N+ E +P S+YL+++IALFFI+ AF+F Sbjct: 9 MEMKY-KLNPVVSLVIVISLFLIASNTIIYMEVNEMNIPLSSYLIIVIALFFINITAFMF 67 Query: 61 MQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQ 120 +Q+ ++ +R +FS VLSL F CL+YF T+IIIQ+ + + L + ND AI+YLFRQ Sbjct: 68 LQMDYMSNRIEFSKFVLSLTFFGCLVYFAETIIIIQKPVNDALELQIKANDTAIFYLFRQ 127 Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA 180 MS IL+ LA+ + E ++ N K + LF F PIVAH LSSH +Y + Sbjct: 128 MSFIILLILAIYSYKLEQSQTLNGCKKIKIMVYCLFPTFIMPIVAHNLSSHNATYTFMLT 187 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF 240 + + + +W Y+ +I +W + L DIWNG+ VI A++YN LL Sbjct: 188 NYLSGDKKAIWNIQYINALIILWSLTSYFIVKVTKLSSDIWNGMLVICLSAIMYNTFLLL 247 Query: 241 MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 + +Y++S WY+SR IEV+SKL V+ M +F L++ ++A RDP+TNI NR +FF L Sbjct: 248 LDKYNLSIWYLSRAIEVLSKLFVIGTLMNCVFVKLKIANHLAIRDPMTNIHNRRFFFTRL 307 Query: 301 TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 + + CVM++D+D FK +NDTWGHP GD + VV+IIG+ I P+D+ AR+GG Sbjct: 308 E-EMLKSTCQNICVMVIDLDDFKSINDTWGHPTGDSTLLAVVDIIGQYIGPNDIFARIGG 366 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEFG+++ + A + +R NV+ T +Y IP+ +T+S+G + + + Sbjct: 367 EEFGIIVKKSSLKDAIEFSNMLRNNVKIGTARGNKYNIPRTITLSVGGTLLTSGTYSVGD 426 Query: 421 IYRLADNALYEAKETGRNKVVVRDV 445 + + ADNALY K G++ ++ ++ Sbjct: 427 VIKSADNALYSVKNNGKDGIMFAEM 451 >UniRef50_A7ZJI1 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Escherichia coli RepID=A7ZJI1_ECO24 Length = 443 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 150/441 (34%), Positives = 238/441 (53%), Gaps = 8/441 (1%) Query: 5 YLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLY 64 ++I + + L+ N+ ++ Y + +I LFFI+ + FIF+ LY Sbjct: 9 KIKIFIFLFSCISIIFLLLHENNGIYITQTTQIS----YSVFIIGLFFINLMIFIFLLLY 64 Query: 65 FIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERL-TSSVVQNDIAIYYLFRQMSL 123 ++ ++RQ +LS AFLS Y + II + L T NDIAIYYLFRQ S Sbjct: 65 YVSNQRQSYLLILSFAFLSNTYYLLEVAIISLSPLGNDLSTIYQKSNDIAIYYLFRQFSF 124 Query: 124 CILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELT 183 +IFLA+ + +N + + +S+ +F P VA LSS Y+L+I + + Sbjct: 125 ISIIFLAVYSTNVKNKSVLEDKRNIIIVVLSILILFITPYVAKNLSSDNIKYSLNIIQYS 184 Query: 184 NENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSR 243 W Y I+ WL LL + IW + +I+ +V N+ LL+ Sbjct: 185 LNRHLPTWNIVYTKIISVFWLVLLISSCISIRNYSKIWLCIILISIVSVCNNLILLYFID 244 Query: 244 YSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ 303 S WY+++ +E++S + ++ M ++F L ++A DPLTN +NR YF + L Sbjct: 245 KSHPAWYMTKFLELISMIYIISTLMYYVFRKLNHANHMAIHDPLTNTYNRRYFIDSLK-- 302 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 ++ + V+++DID FK +ND WGH +GDQVI V II KSIR +D+L R+GGEEF Sbjct: 303 -NISKHHDFSVIMLDIDSFKSINDKWGHHMGDQVIVMVTRIIKKSIRKEDILGRLGGEEF 361 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 G+++ + ++AERIR+N+E + P+K+T+SIG ++EN L+P+E+ Sbjct: 362 GIIIKGNTQKLLLSIAERIRKNIEEQCSEKLLSHGPEKITVSIGCFTSKENNLSPSEMLV 421 Query: 424 LADNALYEAKETGRNKVVVRD 444 AD ALY+AK TG+NKV++ Sbjct: 422 NADKALYQAKRTGKNKVIIHS 442 >UniRef50_A4W9V5 Diguanylate cyclase n=1 Tax=Enterobacter sp. 638 RepID=A4W9V5_ENT38 Length = 473 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 119/434 (27%), Positives = 199/434 (45%), Gaps = 12/434 (2%) Query: 21 ALVLVNSWFNQPGVEEVVPR-STYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSL 79 + + P L +A+F + FM + + D+++ + ++ Sbjct: 24 VALHFLAIKLLNFAPAFSPLLFPLLTSFLAVFHL--FIACFMVMKYWCDKKRIYHLAIAF 81 Query: 80 AFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENT 139 AF + + T+ + + V + I+++ R + + +L LA V + ++ Sbjct: 82 AFTGSTVLLLATLTCFPVWLMQPGMPHVNYSGAMIFFMMRNVMMAVLFTLAGVLFIFRHS 141 Query: 140 KQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIM 199 L + L F VA S H E + L + T +WK + Sbjct: 142 PLTRLMRH-LIFAGLLVFTLTMVTVAWFYSGHSELFPLDLINNTTRQFTALWKQIINGAL 200 Query: 200 IFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVS 259 I +WL L+ L LR W T + C V+ I+LL S WY +R E + Sbjct: 201 IILWLIALTTLLIITRLRNLFWASGTFLCTCYVIILITLLPADFIGGSVWYSARLFETTA 260 Query: 260 KLTVMVIFMCHIFSALR-------VTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK-TP 311 L +++ + +FS R + + RD LT ++NR+YF+ L P Sbjct: 261 SLLIILTLLHDVFSLYRNSHIKYQQSYQNSIRDALTRLYNRSYFYESLNQALGKITDSHP 320 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 V++ D+D+FK++ND +GH GD+V++ V N++ S+RP D+ AR+GGEEF +LL++ Sbjct: 321 VSVIVCDLDYFKRINDNYGHLQGDKVLQFVANLLMDSVRPQDITARIGGEEFVLLLSNTH 380 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 +E A+ +AERIR ++ E +P+ VTIS+G + E AD A+YE Sbjct: 381 SEAARLVAERIRLSLSSFDRITTEGMLPESVTISMGIYTATTLPVTAEECVERADKAMYE 440 Query: 432 AKETGRNKVVVRDV 445 AKETGRN+VVV Sbjct: 441 AKETGRNRVVVYQE 454 >UniRef50_UPI0001C34201 diguanylate cyclase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C34201 Length = 402 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 112/402 (27%), Positives = 199/402 (49%), Gaps = 9/402 (2%) Query: 51 FFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQN 110 +V FM + + D+R+ ++LAF + + T+ + S++ N Sbjct: 2 LVFHSVIACFMVMKYWCDKRRLYLVAIALAFTGSALLMIGTLTSFPAWLNLYQFSTINYN 61 Query: 111 DIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSS 170 D IYY+FR + + +L ++ + V + + + + LF V +A SS Sbjct: 62 DAMIYYMFRHILMAVLFIVSALLYVVRDVPLSRMTHTSLFFGMLLFTVVIIA-LAWFYSS 120 Query: 171 HYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFC 230 H ++L + + + +W I+I +W+ + +R W ++ C Sbjct: 121 HSSLFSLDLIDNETRHFMAIWNRVINIILIVLWVATFVTLMIITRIRNMFWVSGNFLSLC 180 Query: 231 AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRV--TKNI-----AH 283 + + +L + +WY +R E ++ L ++ + + +F+ R K + Sbjct: 181 YIGTLLMMLIAGQAEDISWYRARLFETIATLLIIFVLLYDVFNLYRESHLKYQQSYQNSI 240 Query: 284 RDPLTNIFNRNYFFNELTVQSASAQKT-PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 RDPLT ++NR+YF++ L SA +T P V++ D+D FK++ND +GH GD+V+K V Sbjct: 241 RDPLTRLYNRSYFYDALNHSLRSASRTQPVSVVVSDLDRFKRINDCYGHLQGDKVLKFVA 300 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 ++ S+RPDD+ AR+GGEEF ++L + + A+ +AERIRE + ++ E +P+ + Sbjct: 301 RLLMDSVRPDDIAARIGGEEFVLMLANTPPDTARQVAERIREKLSSFDKNSSEEQLPEPI 360 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 TIS+G AD A+YEAKETGRN+VVV Sbjct: 361 TISMGVFTATSAETTAETCVECADKAMYEAKETGRNRVVVYS 402 >UniRef50_C1M4A3 Diguanylate cyclase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4A3_9ENTR Length = 449 Score = 331 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 116/429 (27%), Positives = 207/429 (48%), Gaps = 14/429 (3%) Query: 28 WFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIY 87 + P + S Y ++ + FM + ++ RR+ L+ AF ++ Sbjct: 27 LWYIPFSNQRYSLSFYPVIATFAGVLHIQTGCFMTMNYMSYRRKKYLLPLACAFYFSGVF 86 Query: 88 FVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSK 147 + + I + V+ NDIA+ Y R M + L F +N K+++ Sbjct: 87 LFLALYIY---FYKNGLPGVIYNDIAVLYFMRNMLITGLFFATYYLYTFKNKKEKH---G 140 Query: 148 KMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLL 207 K + + + ++A + S + + + W+ S++ ++I +W ++ Sbjct: 141 KTVIYATYLWCMLHLVMAILYSIRITPISFQLVDTETFEWLRPWRGSFIYVLIILWTCIV 200 Query: 208 SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIF 267 + L+ W ++++A +L I +L + + WY++R +E +S + VM++ Sbjct: 201 LLGAKLTRLKTQFWVSMSLVALSNLLSVIIMLKYTHIDSAGWYLARGLECLSAMAVMIVL 260 Query: 268 MCHIFSALRVTKNI-------AHRDPLTNIFNRNYFFNELTVQSAS-AQKTPYCVMIMDI 319 M IF + ++ + RDP+T +FNR YF+N L+ + A P ++ DI Sbjct: 261 MSDIFKRYKASRQAYELSYENSVRDPMTRLFNRGYFYNALSNEIKMTAPHKPLSIVFCDI 320 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 D FK VNDTWGH GD+VI + I+ + R +D++AR+GGEEF +LL + + + A +A Sbjct: 321 DFFKSVNDTWGHLQGDRVIIKLSEIMQRLSRRNDIVARIGGEEFAILLPETNADAAFDIA 380 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 ERIR++VE+ T + P+ +TIS+G V + +N P ++ AD ALY AK GRN Sbjct: 381 ERIRKHVEQQTQATTKGDFPRIITISLGIVTSVDNRSAPEQLADCADRALYMAKNRGRNC 440 Query: 440 VVVRDVVNF 448 VV Sbjct: 441 VVAYSGEEV 449 >UniRef50_C7R6Y0 Diguanylate cyclase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6Y0_KANKD Length = 469 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 190/465 (40%), Gaps = 26/465 (5%) Query: 1 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIAL-FFIDTVAFI 59 ME++ ++ + L ++ + +++ ++ + + ++ +A F + +AF Sbjct: 1 MEREQIKNEAVRLFAVWYSRLIIVFLAFLPLSLILYIDYETSSKDAFVAHNFHVVAIAFA 60 Query: 60 FMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF- 118 + F+ L L+Y + II + ++ ++ LF Sbjct: 61 TLFSAFLSYITWRCYVATGEVLLRWLVYGFLGFTIIYA--PHGFLTHHGAENLWVFVLFG 118 Query: 119 --RQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVA----------H 166 ++ L +A++ + I + A Sbjct: 119 PASRLVLAFCFLIAMLKYGEMTEPGAIRNKGFIIAIIIFLIIALLVYQAAHLTQFDLNWW 178 Query: 167 ILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD----IWN 222 L + Y S +L + + Q + + I M LS + G +D + + Sbjct: 179 RLLTEYLSISLFLGAVLWMLVQNIRGYMPLQYGIAMIWFALSCLSFSIGTVWDHQWWLAH 238 Query: 223 GVTVIAFCAVLYNISLLFMSRYSVSTWYISRTI--EVVSKLTVMVIFMCHIFSALRVTKN 280 + F + + + F++ S T Y + +++ + + + + + + Sbjct: 239 IIFASGFLLLSFGVVQAFLTTGSFKTIYSQTELFQQIIREKKKSERALIELKAVNQKLEE 298 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A D LT + NR F + + T C+M++D DHFK++ND +GH GD+V+ Sbjct: 299 LAATDSLTRVANRREFMKRSEEEMSRSSRNSTDLCLMVIDFDHFKEINDQYGHQAGDKVL 358 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K V + + +RP DLL R+GGEEF +LL + + A +AER+R+++E + I Sbjct: 359 KDFVKLAKEVMRPSDLLGRIGGEEFALLLPETNIRSAVKVAERLRQHIEEESIVIGSKRI 418 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 K+TISIG Q + AD LY+AK+ GRN+VVV Sbjct: 419 --KLTISIGVAEYQPKVDTVKKWLHRADEFLYQAKDKGRNRVVVE 461 >UniRef50_A9L0C9 Diguanylate cyclase n=2 Tax=Shewanella baltica RepID=A9L0C9_SHEB9 Length = 466 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 104/454 (22%), Positives = 194/454 (42%), Gaps = 21/454 (4%) Query: 9 SSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVM-IALFFIDTVAFIFMQLYFIY 67 + V+V+LL + ++++ + + P + + +L V A+ ++++ + F Sbjct: 15 HAAVIVALLLLTSALVISPFISIPLPDI----APFLPVYGTAVVLLESITAYLLLSQFAS 70 Query: 68 DRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILI 127 +R+ F+ V S + V ++ + L ++ Q+ + I+ +F S LI Sbjct: 71 NRQVFAGFVASAYLFLIPLVTVQLLVFPGVFAPKGLLNAGSQSAVWIW-VFWHASFPTLI 129 Query: 128 FLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENG 187 LAL+ + T+Q K L + + + ++ + + + Sbjct: 130 LLALMAQQKLTTQQVAPMQLKYWLWGFVLIPVLCSLALALFATWGSHWLPILIAKNSYKQ 189 Query: 188 QVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVS 247 + + Y ++ + L + ++ ++V +++ LF Sbjct: 190 LL--HSPYALLVWGLNALALVCMIRRARSNNVLYTWLSVALLASLIDVTLTLFAGARFSL 247 Query: 248 TWYISRTIEVVSKLTVMVIFMCHI-------FSALRVTKNIAHRDPLTNIFNRNYFFNEL 300 WY +R VS + ++ + + A + +D LT +FNR Y ++L Sbjct: 248 GWYAARISSSVSSMVLLCALLWEVNRLYVATQRANESLYQQSVKDTLTGLFNRRYLESQL 307 Query: 301 TVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLAR 357 + A K P C++++D+DHFK ND GH GD + TV + +S+ RP D +AR Sbjct: 308 AIHIDHAKRHKEPLCLLVLDVDHFKAFNDQHGHLAGDDCLVTVAKQLEQSLYRPADFIAR 367 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN 417 GGEEF V+L D + +AER+R NV + + VTISIG V + + Sbjct: 368 YGGEEFIVVLPHTDAKDGMQIAERLRLNVSAEKIEYQGQLL--SVTISIGCAVLRHSEET 425 Query: 418 PNEIYRLADNALYEAKETGRNKVVVR-DVVNFCE 450 + AD+ALY+AK GRN V V D + Sbjct: 426 AQSLLIAADSALYQAKAAGRNCVKVAVDEPDITH 459 >UniRef50_Q2SUR3 GGDEF domain protein n=54 Tax=Burkholderiaceae RepID=Q2SUR3_BURTA Length = 628 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 98/459 (21%), Positives = 168/459 (36%), Gaps = 32/459 (6%) Query: 8 ISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIY 67 I+ LL G ALV + L+ F +A ++ F+ Sbjct: 179 IARLYTACLLIGFALVPAYLIVYVRFFID-----PRLVFENHQFHELAIAAATLEGLFVT 233 Query: 68 DRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF---RQMSLC 124 L L +I + + + +I ++ L+ ++ + Sbjct: 234 YVTWRCYLSSGEPLLRWLTLGFFGFALIYSL--HGAFTGMAHQNIWLFLLYGPASRLVMS 291 Query: 125 ILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFG---------GPIVAHILSSHYESY 175 IL+ + ++ L FV PI H+ + Sbjct: 292 ILLLVGQLSYFRNADPPERRTLLSTWLPWIAGFVLVCVAVAAIAYSPIAGHLWTRASMEG 351 Query: 176 NLHIAELTNENGQVVWKA----SYVTIMIFMWLTLLSVNLYFNGLRYDIWN---GVTVIA 228 I L N + + V + M L S+ +W + Sbjct: 352 GAMIVSLVNVALLLARRIRTPLMLVYGISVMSFALSSIAFILGKPWNHMWWLAHAIFAAG 411 Query: 229 FCAVLYNISLLFMSRYSVSTWYISR--TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDP 286 F + + + ++ S +T Y + + + + + + +++A DP Sbjct: 412 FFMLSFGVVQALITTRSFATVYSQQDLMARLAESMARTEGALQELKRTNQKLEHLATTDP 471 Query: 287 LTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNI 344 LT NR F ++ + A T + ++ +D+D+FK +ND +GH VGD V++ V Sbjct: 472 LTGASNRRKFIEQMQAEIARAKRDGTAFSLLALDLDNFKTINDNYGHQVGDVVLRNFVRQ 531 Query: 345 IGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTI 404 +IRP D +ARVGGEEF VLL + + A +AER+R + + P VT+ Sbjct: 532 CLAAIRPYDHIARVGGEEFMVLLPRMLADTASGIAERVRTTIANASFGIDGTHTP--VTV 589 Query: 405 SIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 SIG + +EI AD LY AK GRN+VV Sbjct: 590 SIGVSQYGRDGDTVDEILSAADKLLYRAKNEGRNRVVAS 628 >UniRef50_B8GRD6 Diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRD6_THISH Length = 464 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 100/451 (22%), Positives = 177/451 (39%), Gaps = 32/451 (7%) Query: 16 LLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNC 75 L+ G AL + + ++ R + LF + F Sbjct: 23 LIAGFALTPLIAIAYVYSFQDPALRFEH-----HLFHEVAIGIAIALSAFATYVTWRCYR 77 Query: 76 VLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF---RQMSLCILIFLALV 132 FL L + +I + + +V +A++ +F ++ + F+AL+ Sbjct: 78 ASGEVFLRWLALGFLGFTVIY--LPHGFLTRIVDEGLALFLIFGPASRLVMAACFFIALL 135 Query: 133 NKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHI------------LSSHYESYNLHIA 180 + + L F+ I A++ + + L +A Sbjct: 136 RYRALPDVLPVRCRYQFWLAGLGVFMLIMGIAAYLGQLPWAQARPVLVGLETGAMLLSLA 195 Query: 181 ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD----IWNGVTVIAFCAVLYNI 236 + M+ + + + + ++ + +G+ F + Y I Sbjct: 196 GILVMAVLRTRSPLMTVYMVSLAVFAQASLAFLLATPWNHLWWLGHGIFAAGFFMLSYGI 255 Query: 237 SLLFMSRYSVSTWY--ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 F + S ST Y + ++ + + + A R + +A D LT + NR Sbjct: 256 VQAFHTTRSFSTVYSQMDMMAQLREQQAWTQEALLQVQEANRKLEQLASTDALTGVANRR 315 Query: 295 YFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 ++ + P ++ +D+DHFK++ND +GH GD+V+K V I +S+RP Sbjct: 316 QLVERADMEVPRSERHGAPLSLLCLDLDHFKRINDDYGHLAGDEVLKQVAEAIQQSLRPS 375 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 DLLARVGGEEF VLL D D A+ +AERIR +E L + VT+S+G Sbjct: 376 DLLARVGGEEFHVLLPDTDLAGARDVAERIRVKLEGLDIPVQG--VVLHVTVSVGCAQLG 433 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + + + AD LY+AK GRN+VV+ Sbjct: 434 PDGADMKSLTHTADERLYQAKALGRNRVVIA 464 >UniRef50_A1TWP6 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1TWP6_MARAV Length = 565 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 96/432 (22%), Positives = 165/432 (38%), Gaps = 28/432 (6%) Query: 39 PRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQI 98 ++ +L +++AL + F+ + R Q + S + ++ Q Sbjct: 141 WQTMFLGIVVALALYNLFLFLIV-------RHQTYLWYVLTVVCSGAVQLNFNGLLFQWF 193 Query: 99 IEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFV 158 + + + + + FL + + + L + F Sbjct: 194 WPDVPWINRYFTVPVVSAALIAAIVFTMKFLLVKSYSRWGYRILQALLAVNLLGLIYGF- 252 Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLY------ 212 G V I S ++ +A L N + W LL +L Sbjct: 253 LGSYQVGIIWISSLAAFATPVAWLIGINV-WRRGQILGGFYVLAWTPLLLGHLVLAVSKL 311 Query: 213 -------FNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYIS--RTIEVVSKLTV 263 F L V VI L + R + + + ++ + Sbjct: 312 GWIPRSPFTELAPQAGVAVEVILLSFALAYRINMERRRRQQAQEHALDIQRQANLTLESR 371 Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDH 321 + + A + I+ D LT++ NR F +L + + ++++DIDH Sbjct: 372 VRERTEELEQANEQLRAISLTDGLTHVANRRRFDEKLETEWNRALRHEHELSLILLDIDH 431 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 FK+VND +GH VGD + + +I+ + R DL+AR GGEEF +LL D A+ +AE Sbjct: 432 FKQVNDRFGHLVGDDCLVALASILSDEVQRSGDLVARYGGEEFAILLPTTDVAGAQQVAE 491 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNK 439 R+R +V R ++ E+ P +TIS+G N + E+ R AD ALY AK GRN+ Sbjct: 492 RMRLSVARTPVNSGEHMSPVSLTISLGVATLTPNRQSDCQELIRRADEALYAAKSDGRNR 551 Query: 440 VVVRDVVNFCES 451 VVV + Sbjct: 552 VVVWHPKAVAPT 563 >UniRef50_D0ZCJ5 Diguanylate cyclase n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZCJ5_EDWTE Length = 456 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 119/430 (27%), Positives = 195/430 (45%), Gaps = 14/430 (3%) Query: 23 VLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFL 82 V F V+ R + L + +F+ + F +R+Q L +++L Sbjct: 25 VCYCLIFLTAAQPMVLLRGFIAVCNAILLIMHIFIALFIFMQFNCERQQIYKIPLIVSYL 84 Query: 83 SCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQR 142 + +++ Q I +++ ND ++YL R + +L AL +++ Sbjct: 85 LSASLLLCSLLFCQDIFFPEYKNALTLNDFVLFYLIRYSGMAMLFLYALYLY---RRQEK 141 Query: 143 NLFSKKMTLCISLFFVFGGPIVAHILSSHYE--SYNLHIAELTNENGQVVWKASYVTIMI 200 + + +SL + A +LS+H + ++N Q ++ + M Sbjct: 142 GAIALGPVVALSLTMSVAVALGALLLSNHSLHSLWLEPRLLQVSQNYQAGYRQVVLPFMC 201 Query: 201 FMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSK 260 +W L + ++ L W VT+ + + + + S WY S +V+ Sbjct: 202 TLWGALALLLIWQTRLATRFWLAVTLASLIILGGFVLQWRSPQVSSVGWYGSLLFGLVAN 261 Query: 261 LTVMVIFMCHIFSALRVTK-------NIAHRDPLTNIFNRNYFFNELTVQSASAQKT-PY 312 VM IF+ IF R + N A RD LT FNR Y++ L T P Sbjct: 262 FYVMEIFLYDIFQRYRRIQIEYAISYNNAIRDGLTQTFNRAYYYGCLQRALPQCGATYPL 321 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 V++MDID FK +ND +GH GD+V+ V IG+ RP+D++ARVGG+EF +LL D Sbjct: 322 GVLMMDIDRFKLINDRYGHLSGDRVLCEVARAIGRGARPEDVVARVGGDEFCILLYHADA 381 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 + +A+AERI +V L + P VT+SIG VV +E+ + AD ALY+A Sbjct: 382 AQTRAIAERICRDVAALPLTALDGT-PLSVTLSIGGVVCEESRQSAQACVAQADMALYQA 440 Query: 433 KETGRNKVVV 442 K GRN+VV+ Sbjct: 441 KLAGRNRVVM 450 >UniRef50_A1U4U5 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U4U5_MARAV Length = 571 Score = 281 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 101/431 (23%), Positives = 173/431 (40%), Gaps = 24/431 (5%) Query: 24 LVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLS 83 + +L + + + + + F LYF +++ N SL +S Sbjct: 162 WFSLKVYDDENSRRALAGGHLDIALMVGMMLALVFYNGLLYFATSKKE--NIYYSLYLIS 219 Query: 84 CLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRN 143 L++ ++ ++ + + V N L +L +A+ + Sbjct: 220 GLVWIALSYGLVAKAFNAYGDAVFVLN----LSLITMPIFLLLFMMAIFETHEYFRTEHR 275 Query: 144 LFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMW 203 + + L + + FV+G +A L L + + + + K ++ + Sbjct: 276 VLQGMLAL-LVVTFVYGLFDIATALKPASSLAALMMVVTFSVSISLFRKGHP---LVKFF 331 Query: 204 LTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTV 263 L + + FNG + G+ + +++ + V + + + ++ Sbjct: 332 LVGHTFFVVFNGFAVLYYKGL-----------VQPNYINSHGVGIGIVLEALTLAFIISY 380 Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDH 321 + + I S K A DPLT +FNR YF E + A P V+ +DIDH Sbjct: 381 RIKVLEDIRSKQDELKRQASTDPLTRLFNRRYFMAEGEYVLEQARTSGEPLSVIAIDIDH 440 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK VNDT GH VGD V+ V ++ + R DL+AR GGEEF +LL D AER Sbjct: 441 FKAVNDTHGHNVGDLVLVEVASVFRQFSRDRDLVARFGGEEFVILLPGADLTEGFGCAER 500 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IR VE + D + + +VT+S+G + + AD +LYEAK GRN+V Sbjct: 501 IRNAVEAMVIDGGDG-LAVRVTVSVGVAEVNPLLESVEGAVKRADRSLYEAKAGGRNRVC 559 Query: 442 VRDVVNFCESP 452 D P Sbjct: 560 GFDGPAGKALP 570 >UniRef50_B1XII1 PleD protein n=3 Tax=Bacteria RepID=B1XII1_SYNP2 Length = 516 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 96/454 (21%), Positives = 179/454 (39%), Gaps = 21/454 (4%) Query: 17 LFGLALVLVNSWFNQPGVEEVVPRSTYLMVM--IALFFIDTVAFIFMQLYFIYDRRQFSN 74 L + V S+ + ++ + + IA + + F+ + R F+ Sbjct: 66 SIALGSLWVISFDLIERDPNISIQAFFWVNFGCIAGNLVQPLLARFILKKYSQSRHFFNQ 125 Query: 75 CVLSLAFLSCLIY--FVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALV 132 L +++ I + I+ + + +L LIF ++ Sbjct: 126 VRGVLTYITAATLSPMASAFIGVTSIVFAERMEWGQYGLNW-FTWWLASTLAHLIFTPVI 184 Query: 133 NKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLH-IAELTNENGQVVW 191 + + + + VF + + S+ +Y L I T Sbjct: 185 LLGKDF--FSRKIPYHVIEMLLILAVFISVSWSIFIQSYPVAYLLLLILNWTVFRYGAFV 242 Query: 192 KASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF--------MSR 243 + V+I+ + + + L L + + + +F V SLL ++ Sbjct: 243 SSLLVSIVSILAIYTTAHGLGVFVLESQNQSLLFLQSFMGVFALSSLLLSAVVEERSRAQ 302 Query: 244 YSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ 303 S+ + T ++ + + + + + + H D LT I NR F LT + Sbjct: 303 TSLKKALDNSTKLILERTKELRRSEALLRQTNQELQKLVHLDGLTQIANRRCFNQRLTAE 362 Query: 304 SAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGG 360 ++ P +++ D+D+FK+ ND++GH GD+ + + + + RP DL+AR GG Sbjct: 363 WHRLYREQKPLALILFDVDYFKRYNDSYGHQQGDECLIQIAQAVKHLLKRPADLVARYGG 422 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK-VTISIGAVV-TQENALNP 418 EEF V+L + E A +A+RIR V L + I + VT+S+G V ++ P Sbjct: 423 EEFVVVLPNTTQEGATIVAKRIRRTVLELQIAHNATEINEAIVTVSLGVVSGIPQSQEKP 482 Query: 419 NEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 + AD ALY AK+ GRN++VV F P Sbjct: 483 LTFVKKADQALYLAKQQGRNRIVVAGESEFPHLP 516 >UniRef50_B5JW02 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW02_9GAMM Length = 595 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 93/424 (21%), Positives = 161/424 (37%), Gaps = 32/424 (7%) Query: 44 LMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERL 103 +M + L+ + + ++ + R L ++ ++ ++ ++ + + + L Sbjct: 170 IMALGVLYGMLIIMGLYNIFVYFAVRETVY-----LHYVGYVLSLLLFMVALNGLGYQYL 224 Query: 104 TS-SVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGP 162 S ND + + L+F ++ +T ++ K+ L + V Sbjct: 225 WSRWGGLNDRILLQGIAFTIIFSLLFARDFLRIYPHTHPKSSRIVKIILWAASGLVVASL 284 Query: 163 IVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIM---------IFMWLTLLSVNLYF 213 + + I ++ + +FM +L F Sbjct: 285 FLPYFYVIRVLIICT-ILACVMGLFAGFYRQVEGYGVARFYLYSWSLFMLGAILVALNKF 343 Query: 214 NGLRYDIWNGVTVIAFCAVLYNISLLFMS---------RYSVSTWYISRTIEVVSKLTVM 264 + L ++ +++ V + ++ RY + E V L Sbjct: 344 DVLPSNMITEYSMLFGTGVGTVVLSAALAVRLNDEKNKRYHAQAEALRVQRESVELLEER 403 Query: 265 VIFMCH-IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDH 321 V + A + +++ D LT + NR L ++ P M+MDID Sbjct: 404 VKERTSALREANEKLEKLSNTDSLTGLNNRRSLDELLAMEVKRTCRTGAPLSAMMMDIDR 463 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 FK NDT GH VGD +K V +I + RP D++ R GGEEF VLL D + A+ +AE Sbjct: 464 FKAFNDTHGHQVGDACLKAVAGVIASTAQRPSDVVGRYGGEEFCVLLPDTPLDGAQIIAE 523 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAKETGRNK 439 RIR VE L +P VTISIG + + + AD ALY AK GRN Sbjct: 524 RIRAAVENLDFTVSGQRVP--VTISIGVSELTYCASDSGKALVEAADEALYSAKSAGRNC 581 Query: 440 VVVR 443 V + Sbjct: 582 VRLA 585 >UniRef50_Q1J2W1 Diguanylate cyclase, GAF, HAMP domains protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2W1_DEIGD Length = 555 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 119/233 (51%), Gaps = 8/233 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 V +IA L ++L F + ++ + ++ + + + + + Sbjct: 328 LCVPLIAQGDTLGVVTLHFETGEALE--LARPLAQRFAERVALSLVNLRLRAT---LRQQ 382 Query: 282 AHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RDPLT ++NR Y T + A ++ P ++++D+DHFK+ NDT+GH +GD +++ Sbjct: 383 SIRDPLTGLYNRRYLEETFTRELARVQRRRQPLSLLMIDVDHFKQHNDTYGHALGDTLLR 442 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + + + R +D++ R GGEEF VLL + D +A+A AE +R +VE L + + Sbjct: 443 RLATHLQRFFRTEDIVCRYGGEEFVVLLPECDAPQAQARAEALRRSVENLAVTSNDAEFV 502 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 +TISIG ++A P ++ AD ALY AK GRN+V + P Sbjct: 503 A-LTISIGGASWPDHATTPEDLLARADAALYRAKHRGRNRVEFEPIPGAAGLP 554 >UniRef50_Q3IJX5 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IJX5_PSEHT Length = 621 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 92/453 (20%), Positives = 169/453 (37%), Gaps = 48/453 (10%) Query: 3 KDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQ 62 K Y + + + L L + S+ + V L+++I + F+ Sbjct: 205 KQYFAYTGAITLMLSILLYFICGFSFIHTRSAGTVQLMIPMLVMLITVLFLP-------L 257 Query: 63 LYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMS 122 + + + + ++ + + + ++ LF ++ Sbjct: 258 QQQVCQPKTVTWFKVQKIIIAIYALLIAFIWLFPTLV---------------VTLFCLIT 302 Query: 123 LCILIFLALVNKVSENTKQRNLFSKKMTLCISLF---FVFGGPIVAHILSSHYESYNLHI 179 I++ +V + + + K + L + F V+ V+ + Sbjct: 303 TPIVLGYYVVTTLLCIRQNPSEPQKALLLALCSFLAAIVYFIITVSGLYIFTNSRVAFVF 362 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 + + + + I+ + D +LL Sbjct: 363 ICSLSCAFSLGYAVMKLFIL-----------------QRDEQVTTQQTLIAKSAAQDALL 405 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + +V + + + + + R + + DPLT I NR +F + Sbjct: 406 HERLSLQESVRQELETQVDERTFELQVTLRELEEKNRELEQLNMEDPLTGIKNRRFFDKK 465 Query: 300 L--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLA 356 L ++ + ++TP V+++DID FK +NDT+GH GDQVI+T + I K + RP D +A Sbjct: 466 LVMELRRSRREQTPLSVIMLDIDKFKVINDTYGHLTGDQVIRTAADTIKKQLQRPLDEVA 525 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA-VVTQENA 415 R GGEEF VLL + + A A+AE+IR + I TIS G E+ Sbjct: 526 RYGGEEFVVLLPNTQNDGAIAIAEKIRHAIATNNVHVAGTTI--SFTISAGVYTSVAEDI 583 Query: 416 LNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 NP AD ALY AK+ GRN+V+ + Sbjct: 584 NNPEIFTERADKALYFAKQHGRNQVINFPIPQS 616 >UniRef50_UPI0001C3940A response regulator receiver modulated diguanylate cyclase n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3940A Length = 392 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 4/191 (2%) Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDID 320 + + + + +A D LT + NR F L ++ P +++ D+D Sbjct: 180 ALERSRIALKKTNQELQRLALYDDLTQVANRRRFNEYLAYNWHRCSREQEPIALILCDVD 239 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALA 379 +FK NDT+GH GD + + I +I R DL+AR GGEEF ++L + A +A Sbjct: 240 YFKPYNDTFGHQAGDDCLHKIARAISGAIQRSVDLVARYGGEEFAIILPNTPINGAVKVA 299 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRN 438 ERIR+ VE L +P VT+S+G + L+ + + AD ALY+AK GRN Sbjct: 300 ERIRKQVENLRVPHPGSQSSDYVTVSLGVACKIPHSELSVDSLIAQADEALYQAKNQGRN 359 Query: 439 KVVVRDVVNFC 449 V+ + + Sbjct: 360 CTVIAESPSCE 370 >UniRef50_B9Z462 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z462_9NEIS Length = 461 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 99/440 (22%), Positives = 176/440 (40%), Gaps = 18/440 (4%) Query: 16 LLFGLALVLVNSWFNQPGVEEVVPRST----YLMVMIALFFIDTVAFIFMQLYFIYDRRQ 71 LL GL + + + VP + + + AL +++ + L F D + Sbjct: 15 LLAGLIATAMTAAVLMILPDIDVPTALGGNLRPVQITALTVTNSIIAYLVLLQFYAD-HK 73 Query: 72 FSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLAL 131 SN +LS+AF + +I + + +L R LI LA+ Sbjct: 74 LSNGLLSVAFGYSALMSGYLLINLPGVFSTSGGFPPGSRMAIWLWLARLGGTAFLILLAM 133 Query: 132 VNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAH-ILSSHYESYNLHIAELTNENGQVV 190 + + + + + L + + G A +LS +L I + + + + Sbjct: 134 LVLQRQQDRPLSKRVRCQALSLCVLAPLGLAWFAVAVLSRLVPDLDLLIKDNS--DYSAL 191 Query: 191 WKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWY 250 + ++ W L L LR + + + +LY I++ S W+ Sbjct: 192 THSGIGAYLLASWFVALLSVLLVTRLRSAFHCWLALSCYSYLLYLITVCSSSIRYTVGWH 251 Query: 251 ISRTIEVVSK-------LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ 303 SR E+ + L ++ + + R + D LT + +R +F L + Sbjct: 252 ASRFFELAAAGIMLGALLFEVLKLQTRLQHSYRQAYEASIHDSLTGLSSRRHFDAVLKMA 311 Query: 304 SAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGE 361 + P +++ DID FK+ ND +GH GD+ I+ + + + +R D +AR GGE Sbjct: 312 LQQQARHQAPLTLLMADIDFFKQYNDHFGHVEGDRCIQRIAACMAEQLRGGDTVARYGGE 371 Query: 362 EFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNE 420 EF +L D +A+ AER R VE L P ++ VT+S+G N Sbjct: 372 EFVAILQYCDLVQARQAAERFRAAVESLALPTPPGSLRPVVTVSVGLYCHPANRPATAGW 431 Query: 421 IYRLADNALYEAKETGRNKV 440 + AD +LY AK GRN++ Sbjct: 432 LVEQADRSLYAAKRAGRNRI 451 >UniRef50_P73713 Sll1687 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73713_SYNY3 Length = 970 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 7/227 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + +IA L ++L + S ++ + V +N Sbjct: 745 LCIPLIAQGETLGLLNLCS----DRAGVISSDQQQLAKAVAEQVSLAIANIKLRERLENQ 800 Query: 282 AHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RDPLT +FNR Y + A V++ DIDHFK+ ND GH GD V+K Sbjct: 801 SIRDPLTGLFNRRYLEQFFLQEIGRAKRYNHSIGVIMGDIDHFKQFNDQLGHDAGDHVLK 860 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 T+ I+ +IR D+ R GGEE ++L E AE +R+ + + + + Sbjct: 861 TIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVKAESLRQAIASMEVEYKGKELG 920 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 +T+S+G + I + AD ALY+AK GRN+VV+ D V Sbjct: 921 -TLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNRVVMADEV 966 >UniRef50_D1UJZ5 Diguanylate cyclase n=6 Tax=Burkholderiaceae RepID=D1UJZ5_9BURK Length = 477 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 101/441 (22%), Positives = 181/441 (41%), Gaps = 18/441 (4%) Query: 14 VSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFS 73 V+L+ + + + P + Y AL D + + + + R + Sbjct: 35 VALMSVVVFLAAVPFAKIPLAQVPAFIPVY---ESALVLNDLITAVLLFGQSVIARSRAL 91 Query: 74 NCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVN 133 + S + + + + L ++ Q+ I Y+F I + + Sbjct: 92 AALASGYLYTSAMALLHMLSFPGLFSPTGLLNAGPQSTAWI-YMFWHAGFPIFVVAYALL 150 Query: 134 KVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKA 193 K S+ + TL +++ V G L++ ES HI + + + W A Sbjct: 151 KDSKEARMTGKSVAASTLALTVGAVLGLAAAMVALATAGESLLPHIMQNHHYAPAMQWVA 210 Query: 194 SYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISR 253 + + L +L + D+W V + A+ + ++ RY + +Y+ R Sbjct: 211 GSTWGLCLLALVVLY--RQKSRSTIDLWLMVVLCAWICDVALSAVFNEGRYDL-GFYVGR 267 Query: 254 TIEVVSKLTVMVIFMCH-------IFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQS 304 + + V+++ + + +AL K +A DPLT + NR F L Q Sbjct: 268 IYGMCATSFVLLLLLVENTFLHSRLAAALDELKRLATTDPLTGVANRRAFEAALTAHWQR 327 Query: 305 ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP-DDLLARVGGEEF 363 AS + ++++DID FK ND +GH GD+ + V + +++R D +AR GGEEF Sbjct: 328 ASHDGSTLSLLMIDIDFFKLFNDRYGHVEGDRCLVLVAECLARAVRRGSDQVARYGGEEF 387 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 VLL D + A +A R+ + V L N +K+TIS+G +A + + Sbjct: 388 VVLLPDTNAASAAHVARRMCDAVAALCVPNEGSPSFRKITISVGVASRVIDAGSETTVLT 447 Query: 424 L-ADNALYEAKETGRNKVVVR 443 AD+ALY AK GR +V Sbjct: 448 RAADHALYLAKAAGRGRVEQA 468 >UniRef50_A1SRL2 Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRL2_PSYIN Length = 611 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 94/448 (20%), Positives = 179/448 (39%), Gaps = 37/448 (8%) Query: 2 EKDYLRISSTVLVSLLFGLALVLVNS---WFNQPGVEEVVPRSTYLMVMIALFFIDTVAF 58 E + ++ +FGL ++L + + + S Y++ + F D Sbjct: 190 EYSQYYANRYFIIGAMFGLGIILFFYNLFIGYSTRLPQFLWYSGYIISALLAFLTDKG-- 247 Query: 59 IFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLF 118 F Y + FS+ ++F+ V+I+ ++ ++ L Sbjct: 248 -FGYRYLWSNSNWFSDF--------SPVFFIALVMIMATQFTRSFLNTATESVNIDRLL- 297 Query: 119 RQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLH 178 Q+ + + + + + +++ S+FF P++ ++ SY Sbjct: 298 -QLIFVVAGLSIFFSLI--GYRDYAVILGLLSMLTSIFF----PVIGWVIYLKGRSYA-- 348 Query: 179 IAELTNENGQVVWKA-SYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYN-I 236 + W S I+ + + ++ L + + L + Sbjct: 349 ------RFYILGWSIWSLGMILAVLQHIGMIPVTLYSDLSTGLCFSIEAALLSFALADRF 402 Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCH-IFSALRVTKNIAHRDPLTNIFNRNY 295 + L + + +I L +V + A + +A DPLTN+ NR Sbjct: 403 NQLRNEKEEIELIHIEHLKNDQQLLEQLVTERTEELEQAKDRAELLARTDPLTNMLNRRA 462 Query: 296 FFN--ELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 FF + ++ + K+ +M++D+DHFK +ND +GH GD + +V N + IR D Sbjct: 463 FFECGSVEIKRSLRYKSSLAIMMIDLDHFKSINDNYGHAAGDNALLSVANTLKAMIRNVD 522 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 ++ R+GGEEF V++ D E A LA+R+R +E++ P K+T G Sbjct: 523 IIGRIGGEEFAVIIPHADLEIATELAQRLRLGIEKVEIIIDNQ--PVKITACFGVTSIDI 580 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVV 441 + + +E + AD ALY AKE GRN+V Sbjct: 581 KSESLDEALKRADKALYLAKENGRNRVE 608 >UniRef50_A0YI13 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YI13_9CYAN Length = 1006 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 7/233 (3%) Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 L + + ++A L + L+ + V++ + I + Sbjct: 779 LPPKVSLCLPMMAQGETL-GLLYLYSDSPDQLCESKRQLARTVAEQMALAIANLQLRE-- 835 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPV 333 +N + RDPLT +FNR Y L + V+++DIDHFK+ NDT+GH Sbjct: 836 -ELQNRSIRDPLTGLFNRRYLEESLEREINRACRNDHNVGVIMIDIDHFKRFNDTFGHDG 894 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD V+K V ++ S+R D+ R GGEE ++L + E AE++R+ ++++ ++ Sbjct: 895 GDAVLKEVGKLLKSSLRASDIACRYGGEEMTLILPEASIENTYKRAEQVRKLIKQINIEH 954 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 ++ +T S+G E+ + + + + AD ALY+AK+ GR++VV +V Sbjct: 955 KRQSLG-TITASLGVACFPEHGMTGDAVVQRADTALYQAKKEGRDRVVGAEVE 1006 >UniRef50_A0LIF2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIF2_SYNFM Length = 352 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 4/194 (2%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPY 312 + +++ +T + R + +A D LT + NR L ++ ++ P Sbjct: 156 VGILTDITRRKKMEAKLRELNRKLERLATLDGLTRVANRRSLDRFLDLEWRRTRRERAPM 215 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDID 371 +++ DIDHFK NDT+GH GD ++ V I + RP DL+AR GGEEF V+L + + Sbjct: 216 ALILSDIDHFKLYNDTYGHLAGDDCLRAVATAIKECAKRPMDLVARYGGEEFAVVLPNTN 275 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALY 430 + A +AE I VE L +PE + + +T+S G P + AD ALY Sbjct: 276 ADGAVHIAETICREVENLRVRHPESSTGEFLTLSCGVAAMVPREESTPEALVAAADEALY 335 Query: 431 EAKETGRNKVVVRD 444 EAK+ GRN+VV++D Sbjct: 336 EAKKQGRNRVVLKD 349 >UniRef50_B8DLP9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLP9_DESVM Length = 730 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 65/182 (35%), Positives = 91/182 (50%), Gaps = 5/182 (2%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDH 321 ++ A + +A D LT + NR F L + TP ++ +D+D Sbjct: 532 IITDTTEHREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDR 591 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK+VNDTWGH VGD+V++ + I +R D + R+GGEEF VLL D E A A+AER Sbjct: 592 FKRVNDTWGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAER 651 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 +R VE P VT+S+G + + + R AD ALY AK GRN+V Sbjct: 652 LRAGVEAAPLLTTAG--PLTVTLSLGVSASPP-CDGADTLLREADRALYRAKAGGRNRVE 708 Query: 442 VR 443 Sbjct: 709 RA 710 >UniRef50_A8ZVJ7 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ7_DESOH Length = 410 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 80/390 (20%), Positives = 158/390 (40%), Gaps = 30/390 (7%) Query: 61 MQLYFIYD----RRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYY 116 M+ +I+D R + A ++ + ++ I +A ++ Sbjct: 38 MERKYIHDTIEHRFGTYRVLFWFAVFLFNLFAISDYVLTPDIYP-----------VAWFF 86 Query: 117 LFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYN 176 F + ++ +AL ++ +L + + + + A Y Sbjct: 87 RFALATPVMIAAMALASRQRFRRYIIHLLTLLFFMGGASLLLLAVLSSAPNAGHSYTGVA 146 Query: 177 LHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNI 236 L I W A + +F+ L+ + + + V + V Sbjct: 147 LVILFAAIVIRIPFWHAVALCGGLFLLHLLIFP-------WFQMPTDLIVHSALVVFSVA 199 Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF 296 + + Y + + + + M I + R + +A DPLT +FNR +F Sbjct: 200 VISLLGNYRIEREFRRAYLRALK----MKIDARQLEGLNRQLEEMAVSDPLTGLFNRRHF 255 Query: 297 FNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDD 353 L + A ++ ++ +DIDHFK ND GH GD +K + + + +++ RP D Sbjct: 256 DAHLDAEWRSAVREQLSISLIFIDIDHFKLYNDNHGHQAGDLCLKQIADTLTENVHRPGD 315 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-Q 412 R GGEEF VLL + + ++A +A++I+ +++ L + + +VT+S+G Sbjct: 316 ACVRYGGEEFVVLLANTNMDQALYVAQKIQSHLQALAIPHGYSPVAGEVTVSMGVASMVP 375 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVV 442 + P ++ AD +LY AK+ GRN++ V Sbjct: 376 DRDDTPEDLLEKADKSLYRAKDAGRNRICV 405 >UniRef50_B8KJJ5 GGDEF domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KJJ5_9GAMM Length = 540 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 94/413 (22%), Positives = 166/413 (40%), Gaps = 29/413 (7%) Query: 52 FIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVII-IQQIIEERLTSSVVQN 110 I T+ + + D ++ S+ L L + + ++ IQ R + + V+N Sbjct: 145 HISTIEATLLAYFASSDPQKISDAEAHLTELKSHLASMSNIMGTIQSPTNTRFSIARVEN 204 Query: 111 DIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSS 170 + + N + + L S G I A S Sbjct: 205 T----------LFTNIQRIRSYAY-LVNVIVPSEARELEYLASSAATEVRGEIAALQTSL 253 Query: 171 HYESYNLHIAELTNENGQVVWKA-SYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAF 229 N ++ E + ++ ++ + + L ++ F L V A Sbjct: 254 QRNRRNFYVWEFSVTVLILLLSVPVFLWTLSSVTSPLKNLAAIFRRLAAGSEESVVDAAV 313 Query: 230 C----AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM-CHIFSALRVTKNIAHR 284 L+N + F ++ E+ L V + + ++A Sbjct: 314 TKDEIGDLFNAAEAFRRENIRERELLADYRELSRTLEAKVTQRTRELEAKNEELDHLASV 373 Query: 285 DPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT+ FNR L ++ A + P +++MDID FK+VND +GH GD+V+ T+ Sbjct: 374 DKLTDTFNRRALDKALLAELERADRYQRPLSILLMDIDLFKQVNDEYGHLTGDKVLVTLS 433 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 I +++R D+L R GGEEF V+ + D E+A+ +AE++R+ +E + + + + Sbjct: 434 QTIRENLRASDILGRWGGEEFLVICPETDLEQARNVAEKVRQAIEGTDFE-----LGKTI 488 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV---VRDVVNFCESP 452 TISIG V E + + AD ALY+AK GRN+V + +SP Sbjct: 489 TISIGLSVLIE-GTSAESLVAEADKALYQAKSQGRNRVCTTPIAASSGTEKSP 540 >UniRef50_A0ZGP9 PleD-like protein n=3 Tax=Cyanobacteria RepID=A0ZGP9_NODSP Length = 1613 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 7/225 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + +IA L L + ++ +++ + V + + Sbjct: 1394 LCIPMIAQGETLGLFYLSTNNSTALP----DAKLQIARTVAEQVALAIANLNLRETLQYQ 1449 Query: 282 AHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RDPLT ++NR Y LT + A ++ P V+++D+D+FK+ NDT+GH VGD V++ Sbjct: 1450 SIRDPLTGLYNRRYLEEVLTQEIARGQRRQHPISVVMIDVDYFKRFNDTYGHDVGDYVLQ 1509 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 T+ ++ +++R D+ R GGEE ++L + E AE IRE + +LT + Sbjct: 1510 TIGAMLKETVRGSDIACRYGGEEMTLILPESSLEETTIKAEEIREAIAQLTLAYNGQHLG 1569 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 K+TIS+G ++ + + AD ALY AK GRN+VVV Sbjct: 1570 -KLTISLGIAGFPKHGTTGIALIQAADAALYRAKAAGRNQVVVAP 1613 >UniRef50_B4VK28 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VK28_9CYAN Length = 331 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 4/192 (2%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTP 311 E+ K+ + + + + + D LT I NR F L + ++ P Sbjct: 134 MAELHRKIEQERVLKAKLEEMNQELQRLVDLDGLTQIANRRAFDQALQQEWKRLAREQAP 193 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDI 370 +++ DID FK NDT+GH GD+ +K V +I+ K+ RP D++AR GGEEF V+L + Sbjct: 194 LSLILCDIDFFKAYNDTYGHQAGDECLKQVADILRKAAKRPADVVARYGGEEFVVILPNT 253 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNAL 429 A +AE IR ++ + + + VT+S G V P+ + AD AL Sbjct: 254 SLRGAMQVAESIRSKLKSRAIVHEGSGVSKFVTLSCGVAGVIPPPKTTPDRLIAEADQAL 313 Query: 430 YEAKETGRNKVV 441 Y+AK GR++VV Sbjct: 314 YKAKVEGRDRVV 325 >UniRef50_C6MUF5 Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter sp. M18 RepID=C6MUF5_9DELT Length = 739 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 3/243 (1%) Query: 213 FNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIF 272 + + + ++ I+L + T R + + L + I + Sbjct: 473 RTRFKSKSLICLPLKLKYKIIGVINLSDKKNLTPFTEADLRVLTSFANLASLTIERTEVL 532 Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWG 330 + ++ D LT ++NR + + L + Q V+ +D+D FK ND G Sbjct: 533 EESERFEQLSVTDALTGLYNRRFLKSRLEEELNRSIRQGLNLTVIFIDLDFFKNFNDLCG 592 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+ +K +II S+R D++AR GGEEF +L A +AERIR +E+ Sbjct: 593 HLAGDEALKITADIIKASLREMDIVARYGGEEFCAVLPGTSKAEAMIVAERIRSEIEKEK 652 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD-VVNFC 449 + ++T S+G E+ + +D ALYEAK +GRN++V V + Sbjct: 653 FPGEKDIPQMRLTASLGIASFPEDGRTFTTLVHSSDVALYEAKASGRNRIVAARTVPSAV 712 Query: 450 ESP 452 E P Sbjct: 713 EQP 715 >UniRef50_B5JSK2 Response regulator receiver protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSK2_9GAMM Length = 430 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 81/371 (21%), Positives = 148/371 (39%), Gaps = 18/371 (4%) Query: 78 SLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSE 137 L V + + + + N IA ++ + +A+ + Sbjct: 70 QFLLYHRLCLMVGAAAVGAMGLLDLVLIKDGWNIIAPVRYGVGFAVVSIAGIAVFSPFFV 129 Query: 138 NTKQRNLFS-KKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYV 196 + +Q+ L + ++ F+ P + + +Y L + W+A V Sbjct: 130 HRQQQVLLQVNLCVVHMTSLFLLIAP--DELYLHYMPAYMLVMMFSAVICHMFFWRAVAV 187 Query: 197 TIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIE 256 ++ + L +++ C +L + + YS ++ R I Sbjct: 188 GVVTAVSYNALFFLR---PQSFEVIATFNAHFLCTILITWAASYYLEYSARRDFLQRGI- 243 Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 + + + + +++A DPLT ++NR L + V Sbjct: 244 -------LRLERNQLSNVNDQLQHMATTDPLTGLYNRREMERRLQEEWRRGARSDHFISV 296 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTE 373 M++D+D FK ND +GH GD + + + G + R D +AR GGEEF VLL + D E Sbjct: 297 MLIDVDDFKAYNDHYGHQAGDSCLTQLGTLFGGAFQRASDCVARYGGEEFIVLLPETDAE 356 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL-NPNEIYRLADNALYEA 432 A+ LAE++ V + ++T+SIGA Q + + + + AD ALY+A Sbjct: 357 AAQKLAEKLCHKVFDQRIPHTHARAADRITVSIGAATAQSHHEGHYEHLIKAADEALYQA 416 Query: 433 KETGRNKVVVR 443 KE GRN+VV+ Sbjct: 417 KEQGRNQVVMS 427 >UniRef50_Q4KDW8 GGDEF domain protein n=6 Tax=Pseudomonas RepID=Q4KDW8_PSEF5 Length = 315 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 3/193 (1%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT 310 I V+ LT + I + A + ++++ D LT ++NR ++ L + + + Sbjct: 124 IHHVCLVIYDLTDVAINSLALQKANQQLQHLSRTDHLTQLYNRGHWEQRLQFEYS-RHGS 182 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 ++++DIDHFK +ND GH GD VIK V +I + +R D+ R GGEEF +LL Sbjct: 183 SIALLMLDIDHFKSINDRHGHQAGDAVIKRVSELIHQHVRDSDVAGRYGGEEFAILLPHT 242 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 D A+ LAER+R++VE + AI TIS+G A + + AD ALY Sbjct: 243 DLAGARTLAERLRQSVEEQEVIHNGQAIA--FTISLGIACLDRPARDHRCLIEWADQALY 300 Query: 431 EAKETGRNKVVVR 443 +K GRN+V Sbjct: 301 ASKRAGRNRVSTY 313 >UniRef50_C1D439 Putative diguanylate cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D439_DEIDV Length = 633 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 6/213 (2%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 + L + T R + V++ + I + + + + RDPLT ++NR Sbjct: 421 VGLLHLEAGSAAPLTRRQERLAQTVAETAALAIVNLRLRES---LRQQSIRDPLTGLYNR 477 Query: 294 NYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 Y + AQ++ P V+++DIDHFK ND+ GH GD++++ + ++ IR Sbjct: 478 RYLEESFERELHRAQRSDDPIAVIMLDIDHFKHFNDSHGHEAGDELLRALGQLLSGCIRA 537 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 +D+ R GGEEF ++ + ++A A+++R VE + A+ ++V++S+G Sbjct: 538 EDVACRYGGEEFAMVFPGMTLDQATRWADQLRHTVESTQFASRGEAL-EQVSVSLGVAAF 596 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 ++ + ++ R AD ALY AK GRN+V+ D Sbjct: 597 PQHGRHLADLIRAADAALYRAKREGRNRVITAD 629 >UniRef50_Q2BQL8 Probable two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQL8_9GAMM Length = 505 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 4/193 (2%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMI 316 + L + + + + A D LT + NR F + ++ AQ+ +++ Sbjct: 313 AVLQSRIQILMQLKQSQDQLARSARVDGLTQVNNRREFERNIEMEWRRAQRSKRSLALIM 372 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERA 375 +DIDHFK ND +GH GD ++TV I SI R D++ R GGEEF V+L + D + A Sbjct: 373 LDIDHFKPFNDGYGHLAGDGCLRTVAQTIKHSIQRAQDMVCRYGGEEFVVILPETDLDGA 432 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALYEAKE 434 + +AERIR+ + +L ++ + +TIS G +P+E+ LAD LY+AK Sbjct: 433 QMIAERIRKAIAKLKINHEFSSTDNTITISAGVACLSPSQEGSPHELILLADQGLYQAKA 492 Query: 435 TGRNKVVVRDVVN 447 GRN+V + Sbjct: 493 QGRNQVAIVQTSE 505 >UniRef50_C5T1B3 Diguanylate cyclase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1B3_ACIDE Length = 445 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 83/412 (20%), Positives = 161/412 (39%), Gaps = 22/412 (5%) Query: 39 PRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQI 98 P + ++ L + + Y + L + F +++ ++ Sbjct: 47 PAFVHSPTLVTLAGLLAALVTSVLYAVWYFNKNIPGLRLWMLSFLSASVFCASLL-VRDY 105 Query: 99 IEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFV 158 + E L+ + Q+ IA + + + + + ++++F Sbjct: 106 VPEWLSVMLTQSTIA------AAAYLCFLGSRAYLGRAHPPHVVAVAVIVAVMGMAVYFT 159 Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY 218 P + + ++ + + + V + + L V L L + Sbjct: 160 VVHPHMGIRFALAGLVAGVYFLLTAHTLARGGFHNVPVRYLFAVVSGLHGVFLLVRPLLF 219 Query: 219 DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVT 278 + + ++ + ++ + L M R Sbjct: 220 RLVAP----------GTVEDADAGMVALLSQFVVLEATLSLVLMAFGALMLTNEHITREL 269 Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQ 336 +++A DPLTN+FNR F L ++AQ+T V+++D+DHFKK+NDTWGH GD+ Sbjct: 270 RHLAEVDPLTNVFNRRAFLTLLEKAISNAQRTQSGLPVLVIDLDHFKKINDTWGHQSGDE 329 Query: 337 VIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEY 396 V++ V + +R +D++ R+GGEEF + L + +E ++A+AER+R V Sbjct: 330 VLRHFVALANGCLRKEDVMGRLGGEEFAIFLPNASSEGSQAVAERLRALVAHHPAMTGRG 389 Query: 397 AIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 I +T+SIG + + + AD A+Y AKE GRN+V Sbjct: 390 PIA--LTVSIGVTQY-GGGETSDFVLQRADEAMYRAKERGRNRVETLSPPGT 438 >UniRef50_Q55906 Slr0302 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55906_SYNY3 Length = 768 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 7/225 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + +IA L + L + + + V++ + I + + Sbjct: 544 LCIPLIAQGETLGLLFLCTFKGEILPDI-RQQLAKTVAEQLALAIANLKLRE---QLEEQ 599 Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYCV--MIMDIDHFKKVNDTWGHPVGDQVIK 339 + RDPLT +FNR Y L+ + A A++ Y V +++D+DHFK+ ND+ GH GD+++ Sbjct: 600 SLRDPLTKLFNRRYLEQRLSQELARAKRHHYSVGVLMIDVDHFKRFNDSLGHDAGDRILA 659 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 ++ ++ +IR D+ R GGEE ++L D E A AE +R+ + + + I Sbjct: 660 SIGTLLKNNIRTSDVACRYGGEEITIILPDATLEEASQKAEFLRQAIAEMKIEY-SGKIV 718 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 VT S G ++ EI ++AD ALY+AK+ GRN+V+V Sbjct: 719 NSVTASFGVACYPDHGETGQEIIQIADKALYDAKQAGRNRVIVAP 763 >UniRef50_A8ZX32 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX32_DESOH Length = 396 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 90/382 (23%), Positives = 151/382 (39%), Gaps = 26/382 (6%) Query: 69 RRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIF 128 +L L + ++ +++ + E S+V IA+ L+ + + +L F Sbjct: 30 PHIDRMILLVLLVMFSPVFIGGVLLVAYLVSPEWFDRSIV---IALLSLYGFVFVLLLYF 86 Query: 129 LALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQ 188 + L M +V + ++Y L + Sbjct: 87 ILAAFHRRRQKSSWPLMENIMFGS----YVVIVCAGSWFTGTYYTFGALFL--------- 133 Query: 189 VVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVST 248 + AS + + + L+ F L I + + A L+ L + Sbjct: 134 -FFGASISSSLADIRKVRLAYLASFGALVAFIVMDSSGMFRHAPLFTRIPLHPDGSPLPV 192 Query: 249 WYISRTIEVVSKLTVMVIFMCHIFS---ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA 305 W+ + VS ++ I + V + ++ D LT + NR F + + Sbjct: 193 WFGVQVFITVSLTIMLYITIVTFKRWGVREDVYRKMSTVDGLTRLTNRRTFIERSEKELS 252 Query: 306 SAQKTP---YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEE 362 S Q+ P +++DIDHFK +NDT+GH GD+V+ + I+ + RP D + R GGEE Sbjct: 253 SGQRRPSSHISCIMIDIDHFKAINDTYGHAAGDKVLVKIATILTEKARPTDEVGRYGGEE 312 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA-LNPNEI 421 F +LL A +AER R ++ I +VT S G + N NE+ Sbjct: 313 FAMLLPATTLAGAVKVAERQRASIANAEIIVDGNII--QVTASFGVASCPSDDIDNINEL 370 Query: 422 YRLADNALYEAKETGRNKVVVR 443 + AD ALYEAK GRN+VV Sbjct: 371 LKTADVALYEAKRAGRNRVVAA 392 >UniRef50_B4VMP7 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMP7_9CYAN Length = 505 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 4/218 (1%) Query: 230 CAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTN 289 A+L +I + L + +F A + K + D LT Sbjct: 275 LAILVFFKQARSESEPRLIDFIQLIAAQLGTLMQRIKVETALFEANQKLKYLVTIDGLTG 334 Query: 290 IFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 I NR F + + ++ P +++ DID FK+ NDT+GH GD ++ V I Sbjct: 335 IANRRKFDQYIHREWQRLFREQLPLSLILGDIDFFKRYNDTYGHQAGDDCLRNVATKIRL 394 Query: 348 SI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI 406 + RP DL+AR GGEEF V+L + + + A +AE IR+ VE L + + VT+S+ Sbjct: 395 LVKRPADLVARYGGEEFAVILPNTNAKGAIHVAETIRQGVETLKIPHGGSESSKYVTLSL 454 Query: 407 GAVVTQENAL-NPNEIYRLADNALYEAKETGRNKVVVR 443 G N+L N + AD ALY AK GRN+ V Sbjct: 455 GVSSLIPNSLVNVEGLINQADQALYRAKAGGRNQTVAE 492 >UniRef50_A0L7F5 Cyclic nucleotide-binding protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7F5_MAGSM Length = 320 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 4/291 (1%) Query: 156 FFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNG 215 +V+ I+S Y + L++ + + +++ + +++ G Sbjct: 32 CWVYTMQHDDIIISPDYPNDALYVLLEGQARVHLGGIQTEPLLILETGSCVGELSIIDQG 91 Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 ++ + + + + ++ + Sbjct: 92 RASAYVLAEGATKLLSIDESRVWSLIHSSHTLACNLLNILS--KRMRNNNRVIIEGSERQ 149 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPV 333 R + A DPLT I+NR +F + Q + P ++++D+DHFK+ NDT GH Sbjct: 150 RKLETFAKVDPLTGIYNRRWFDESMQRQMRRVEHSQNPLSLIMLDVDHFKRYNDTHGHQG 209 Query: 334 GDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 GD+ + + + I +RP D+ AR GGEEF V+L D D + +AER+R VE L + Sbjct: 210 GDEALIALAHTISLHLRPGDIAARYGGEEFAVVLPDTDAVSGRMIAERLRTAVEALEIKD 269 Query: 394 PEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 E +TIS+G T + +E+ AD ALY+AK GRN+VVV D Sbjct: 270 DEGNSLSGITISLGVAQTSGTVDSVSELIATADAALYQAKNQGRNRVVVGD 320 >UniRef50_B9M9A9 Diguanylate cyclase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M9A9_GEOSF Length = 400 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 20/381 (5%) Query: 79 LAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSEN 138 L + + + I++ + + Q + Y L + FLA Sbjct: 26 LPQIRVCLALGFLLYASFGILDHWIIPDIEQFAWTVRYYIVCPLLVGVFFLAYSEIR--- 82 Query: 139 TKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAE--LTNENGQVVWKASYV 196 + L + FV G I+A IL + L+ L ++ ++ Sbjct: 83 ------YQYMYPLMVLAGFVAGVGIIAMILGAGAPGCFLYYVGLLLCLMFYYTFFRLPFL 136 Query: 197 TIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIE 256 + W L + + +T F + +NI+ + + YS+ + ++ Sbjct: 137 AATVLSWTIFLLYEVLVIWTKSIPLPILTNNTFFFIAFNITGMS-ASYSIERYMRQDFLQ 195 Query: 257 ---VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA--SAQKTP 311 + + + + + + + +A DPLT+++NR +FF+ + A + Sbjct: 196 RRKIREQTENLKKALLDVEKSRHEAEEMAKLDPLTSLYNRRHFFSIAERELARYRRYRHS 255 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++++D+DHFK+VNDT+GH +GDQV++ + I K +R D R GGEEF +L+ + D Sbjct: 256 LSIIMIDLDHFKRVNDTYGHFIGDQVLQALAAAIDKLMRKADTPCRYGGEEFAILMPETD 315 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALY 430 A+ L RI++ +E D + P KVT+S+G ++ AD+ALY Sbjct: 316 LAAAQNLGRRIKDAIESTEIDTRKG--PIKVTLSMGIASLDGAEDACIEQLVERADHALY 373 Query: 431 EAKETGRNKVVVRDVVNFCES 451 +AK +GR+ + + D + E+ Sbjct: 374 QAKYSGRSLIRIWDKSSSAEA 394 >UniRef50_Q30SB7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SB7_SULDN Length = 487 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 101/445 (22%), Positives = 186/445 (41%), Gaps = 25/445 (5%) Query: 16 LLFGLALVLVNSW-FNQPG--VEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQF 72 LL + + W + P V E+V ++ AL F F M +I + Sbjct: 47 LLALFLMKNIKEWKYYIPFFIVAEIVADYQVFTLIQALQFSFINLFETMFGAYIIKKLSS 106 Query: 73 SNCVLSLAFLSCLIYFVITVIIIQQI--IEERLTSSVVQNDIAIYYLFRQMSLCI--LIF 128 ++ L++F+I + ++ + + + + ++ F ++ + Sbjct: 107 NDGAGFTNTKYVLLFFLIGLTLMPAMSALFGAIVYHTQIDTQTTFFEFWRIWFFGDSIGI 166 Query: 129 LALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQ 188 L L + + ++ +A +L S + + Sbjct: 167 LLLTPIMVLLKENYKSLKNYDFNIQNISIALLSIYLAIVLFSFTDINFMLPTTPLLFVLL 226 Query: 189 VVWKASYVTIM--IFMWLTLLSVNLYFNGLRYDIWNGVTVIA-------FCAVLYNISLL 239 ++W ++ + M L + S+ +Y+ ++ + F A+L +L Sbjct: 227 LLWIVYKQGVLPGMIMALLITSIAIYYTSSGLGPFSIFGLKGTTIYLQEFIAILVITTLF 286 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMC-HIFSALRVTKNIAHRDPLTNIFNRNYFFN 298 F + ++ E+ L MV + A + N+A +D LTNIFNR Sbjct: 287 FGVLHQEINESKAKLEELNKNLENMVKEKTKSLMEANQKLNNLASKDSLTNIFNRRIIDE 346 Query: 299 ELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356 ++ + + ++++DIDHFK+VND +GH VGD+VI ++V+II K+IR D+ Sbjct: 347 FISKETIKSKRYNNSLALIMIDIDHFKEVNDKYGHQVGDEVILSLVDIISKNIRESDIFG 406 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R GGEEF +LL + + +A +A+ IR+ V+ D TIS+G N Sbjct: 407 RWGGEEFIILLPETNLNQATIVAQNIRKKVQEYRFDKVGQK-----TISLGVSEFNSNDD 461 Query: 417 NPNEIYRLADNALYEAKETGRNKVV 441 + + D+ALY+AK TGRN+VV Sbjct: 462 S-TVFIKRVDDALYKAKATGRNRVV 485 >UniRef50_Q0EXC8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXC8_9PROT Length = 615 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 2/187 (1%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 + + R ++ A D LT + NR YFF ++ A + + Sbjct: 424 TFRGYRGIDRDITDRKELERELESQARTDVLTGLNNRRYFFELAELELARAKRHGNQFSL 483 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++D+DHFK ND++GH +GD+V++ + + ++R DL R+GGEEF ++L + +R Sbjct: 484 LMLDVDHFKLFNDSYGHHIGDRVLQKLSEVCMHTLREIDLSGRIGGEEFAIMLPETRGDR 543 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A +AER+R + + + T+SIG +++ + AD+ALY AK Sbjct: 544 AMEVAERLRLAIAGAPVLLEQQSTFVHFTVSIGVTSLVAAGRQVDDLLKRADDALYAAKN 603 Query: 435 TGRNKVV 441 GRN+V Sbjct: 604 AGRNQVC 610 >UniRef50_C6E9C6 Diguanylate cyclase with GAF sensor n=4 Tax=Geobacter RepID=C6E9C6_GEOSM Length = 713 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 102/246 (41%), Gaps = 3/246 (1%) Query: 210 NLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMC 269 + + + ++ ++L + T + + + L ++I Sbjct: 441 MANRLRFKSKSLICMPLKLKDKIIGVLNLSDKKNLAPFTDADLQVLTSFANLASLMIERT 500 Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVND 327 + + ++ D LT ++NR + N L + Q V+ +D+D FK ND Sbjct: 501 EVLEESERFEQLSVTDALTGLYNRRFLKNRLEEELNRSIRQGLNLTVIFIDLDFFKNYND 560 Query: 328 TWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVE 387 GH GD ++ II S+R D++AR GGEEF +L A +AERIR +E Sbjct: 561 LCGHLAGDDALRITAEIIKASLRDMDIVARYGGEEFCAVLPGTSKVEAMIVAERIRSEIE 620 Query: 388 RLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD-VV 446 R ++T S+G E+ + +D ALYEAK GRN++V Sbjct: 621 REKFPGESEIPQVRLTASLGVASFPEDGRTFTALVHASDVALYEAKAGGRNRIVAARTSP 680 Query: 447 NFCESP 452 E+P Sbjct: 681 GQKETP 686 >UniRef50_C6DCR6 Diguanylate cyclase n=6 Tax=Pectobacterium RepID=C6DCR6_PECCP Length = 532 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 90/368 (24%), Positives = 171/368 (46%), Gaps = 13/368 (3%) Query: 83 SCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLA-LVNKVSENTKQ 141 + L Y T+ + + + ++ ND + Y+ + + + V K N K Sbjct: 171 NYLGYIGGTIYLKNKSVLNEFMNTHFYNDYSSVYVIDKSGIVLYHQDKQWVGKPVSNQKI 230 Query: 142 RNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIF 201 ++ F K + ++ + G P +A + + + + I ++ + + +++ Sbjct: 231 KDAFRDKKSGTAAMPDMQGTPSLAGFDTVNSSGW-IIITLHPSQTVIDLLSSVMRSVLYE 289 Query: 202 MWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKL 261 + + L + I N + ++A A + V +WY +E + ++ Sbjct: 290 GAPVMALTLIALTLLAFSIANPLRLLAVSASKMEEPGVIEKIKKVPSWYFE--VEQLKRV 347 Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDH 321 + + + + AH DPLT + NR + + + + + +++DIDH Sbjct: 348 ILFGTLL--LHKRIGKLSLQAHTDPLTGLLNRRGIYESIELILPKSNQ--VAAIVIDIDH 403 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FK+VNDT+GH +GD VI+ + I + R DL+ R GGEEF LL D D ++A +AER Sbjct: 404 FKRVNDTYGHNIGDDVIRLLAKSIKQGSRESDLICRTGGEEFLALLPDTDMKQAVDIAER 463 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 +R+ VE++ IP+ +TIS+G A + + ++AD+ALY+AK GRN+VV Sbjct: 464 LRKKVEKMPLP-----IPENITISLGVTCFIPGAEQIDNVLKIADDALYQAKHEGRNRVV 518 Query: 442 VRDVVNFC 449 + V + Sbjct: 519 TKVVPDSS 526 >UniRef50_B2V556 Ggdef/hd domain protein n=23 Tax=Clostridium RepID=B2V556_CLOBA Length = 569 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 11/349 (3%) Query: 106 SVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVA 165 NDI + +I + + + K + + Sbjct: 9 QKQINDIVSVVKISSLLFVGIILCKQFIENNSSAIWEINNYYKYVFLCTPLMALILIYLL 68 Query: 166 HILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFM-----WLTLLSVNLYFNGLRYDI 220 S+ + N + L + I+I + L + ++ + Sbjct: 69 WTFSNGNKIKNKYGKVLNKIETMMFVIIFSTIILICGVNQSQYKLLYLFIIITTTIQSGM 128 Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTV----MVIFMCHIFSALR 276 G+ V + + + M + Y + + + + ++ ++ Sbjct: 129 KQGLIVAGISSFIILTMDIIMLPNAEVNVYFQDDLVLAGIFILTAWPLGFYVKIEGEHIK 188 Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 +++ + D LT ++N YF + L V+S P ++ +DID+FK+ ND GH G Sbjct: 189 NLEDMINIDGLTELYNHRYFCDSLVENVKSGEKYNKPVAMIFIDIDYFKQYNDINGHQKG 248 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V+K + II ++ R +D+ AR GGEEF ++L + + E+A +AE +R+++E + Sbjct: 249 DYVLKKIGKIIKENSRKEDIPARYGGEEFSIILPETNEEKALNIAENLRKSIETTYFEGE 308 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 E KVT+SIG V A N E+ + AD+ALY AK +N+V V Sbjct: 309 ENQPNGKVTVSIGVSVYPYKAKNDVELIKSADDALYRAKFFYKNRVEVY 357 >UniRef50_B4VTQ5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTQ5_9CYAN Length = 1341 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 6/213 (2%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 I + + T R V++ + + + + RD LT +FNR Sbjct: 1133 GILYISSPQLGQLTEAKQRLALTVAEHLALSLANLKLRET---LSQQSIRDALTGLFNRR 1189 Query: 295 YFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 Y L + A + P ++++DIDHFK NDT+GH GD V++ + + +SIR Sbjct: 1190 YMEESLEREIHRAQRHQRPMGIIMLDIDHFKHFNDTFGHEAGDAVLRELGIFLQRSIRAS 1249 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 D+ R GGEE ++L D K AE+IR +V+ L + + + + IS+G Sbjct: 1250 DIACRYGGEELMLILPDASLADTKQRAEQIRHDVKGLQIEY-HHKLLDAIAISVGVAAFA 1308 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 E+ E+ AD ALY+AK GR++VV Sbjct: 1309 EHGSTAQELIAAADRALYQAKAQGRDRVVTASS 1341 >UniRef50_B2J0M5 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Nostocaceae RepID=B2J0M5_NOSP7 Length = 888 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 4/217 (1%) Query: 228 AFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPL 287 + ++ + + + + V+ + + +A + +A D L Sbjct: 663 LWGLLIAHQCSAPRYWQAFEVNLLQQLASQVAIAIHQSVLYQQVQAANEELQRLATLDGL 722 Query: 288 TNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNII 345 T I NR F L + ++ P +++ D+D FK+ NDT+GH GD ++ + + + Sbjct: 723 TQIANRRRFDQYLENEWHRLKREQMPLSLILFDVDFFKRYNDTYGHLAGDDCLRQLGSAL 782 Query: 346 GKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTI 404 I RP DL+AR GGEEF V+L + + E A ++A+ IR+ V L + + ++ +VT+ Sbjct: 783 KSVIKRPADLVARYGGEEFAVILPNTEIEGAISVAQTIRQAVYDLIIPHAQSSVCDRVTV 842 Query: 405 SIGAVVTQENALN-PNEIYRLADNALYEAKETGRNKV 440 S+G N P ++ AD +LY AK+ GR++V Sbjct: 843 SLGVASIVPNCETSPQDLINAADKSLYIAKQQGRDRV 879 >UniRef50_B0C2A6 Diguanylate cyclase (GGDEF domain), putative n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C2A6_ACAM1 Length = 420 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 4/216 (1%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + ++ + + + + + A + IA+ D LT + NR Sbjct: 205 LQQQTLALAAKNKQLEEEIQAKLYAQQALEATNKKLDEANKQLSLIANHDALTGLANRRR 264 Query: 296 FFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPD 352 F L ++ P ++I DID FK+ NDT+GH GD ++TV I ++I RP Sbjct: 265 FDEYLQQIWKQTQREQQPLSLLICDIDFFKQYNDTYGHLEGDICLRTVAQKIHQTIVRPL 324 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 DL+AR GGEEF ++L + D E + +AER+R +++ + ++ + VT+SIGA + Sbjct: 325 DLVARFGGEEFAIVLPNTDLEGGQVVAERLRMIIQKSQLPHRGSSVSEFVTVSIGAATVR 384 Query: 413 EN-ALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 + + + + AD ALY+AK++GR++VV + Sbjct: 385 SHPHTSVSSLISRADQALYQAKQSGRDQVVALSITE 420 >UniRef50_A0YVI7 Regulatory components of sensory transduction system n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVI7_9CYAN Length = 477 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 4/202 (1%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 I+ I + S +T + A R +++A+ D LT I NR F L + + Sbjct: 263 ITHYIGIQSDITERHRMQIALEEANRKLQHLANIDGLTQIANRRSFDETLEQEWKRCFRE 322 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLL 367 + P +++ D+D+FK ND +GH GD+ + V I + I RP DL+AR GGEEF V+L Sbjct: 323 QQPIALILCDVDYFKAYNDYYGHLQGDECLIQVAQAISQVIKRPADLVARYGGEEFVVIL 382 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLAD 426 + D A+ +A+ I++ + +L + + + +T+S+G +P ++ AD Sbjct: 383 PNTDGSGARQVAQLIQDQIRQLQSPHVKSDVSSYITLSLGISSIIPSGMTSPEQLVNAAD 442 Query: 427 NALYEAKETGRNKVVVRDVVNF 448 +ALY+AK+ GR+++VV +N Sbjct: 443 SALYQAKQQGRDQIVVNPNINP 464 >UniRef50_Q21JG3 GGDEF domain n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JG3_SACD2 Length = 603 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 104/419 (24%), Positives = 168/419 (40%), Gaps = 37/419 (8%) Query: 62 QLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQN--------DIA 113 + + Y+ + LS+ L+ FV T +I + V+ N D A Sbjct: 172 EYFLRYESEGSLDIALSIHEPQHLLSFVGTQQLIYGLYYGGFMVLVLYNLFIFIAVRDKA 231 Query: 114 IYYLFRQMSLCILIFLAL----VNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILS 169 Y + L A N Q +TL +SL F + Sbjct: 232 FLYYLLYIFFYGLYMGAHNGLTFQYFWPNHPQIGNEGLLVTLSLSLVFALQFSTDILNIK 291 Query: 170 SHYESYN-----LHIAE-------LTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLR 217 + N L IA LT + + +T+ I ++ V +G R Sbjct: 292 EFSKLLNRIAKCLMIACVVAIPAVLTMPYAFMAPVMTVLTLTIMPLFFVMGVLRLASGYR 351 Query: 218 YDIWNGVTVIAFCAVLYNISLLFMSRYSVSTW-YISRTIEVVSKLTVMVIFMCHIFSALR 276 + ++A+ A+++++ + + + V + + + + MV+ + S + Sbjct: 352 PARY---FMLAWTALIFSVIVYVLKVFGVLPRTFFTENGFQIGSIIEMVLLSLALGSRMT 408 Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 K +H D LT I NR F + + A K P ++++DID+FKK+NDT+GH G Sbjct: 409 ELKQQSHTDALTEIGNRRRFDDVFPVEFERAQRNKQPLALLMIDIDYFKKLNDTFGHDAG 468 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 DQ ++ V I R L R GGEEF V+L D+ AK +AERIR+ + Sbjct: 469 DQALRAVATTIKTLTRKPMLPCRFGGEEFAVILPRTDSAAAKIVAERIRQTIAEKPMAKR 528 Query: 395 EYAIPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 E VT+S+G T + I AD LY AKE GRN+V + ++P Sbjct: 529 E------VTVSVGVASTDMGYFTSSRAIMNAADECLYLAKEMGRNRVCLFSEAPQKQAP 581 >UniRef50_D1U434 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U434_9DELT Length = 1051 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 4/183 (2%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDI 319 + + + +A D LT +FNR F + + +++MDI Sbjct: 870 VATIRDITERKATEARLHELATTDSLTGLFNRRRFMELAEREFMRTKRYQGALTMLMMDI 929 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFK+VNDT GH VGD+V++ + I ++R D+L R+GGEEFGVLL + D A +A Sbjct: 930 DHFKRVNDTHGHGVGDEVLRELARISRTALRELDILGRLGGEEFGVLLPETDAGPAMEVA 989 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 +R+R +E+ + + ++T+SIGA + +A + + AD ALYEAK++GRNK Sbjct: 990 QRLRRAIEKASMATDAGTL--RITVSIGAATSNNDAETVETLLKRADVALYEAKQSGRNK 1047 Query: 440 VVV 442 VV Sbjct: 1048 VVA 1050 >UniRef50_A0YVN1 PleD-like protein n=2 Tax=Cyanobacteria RepID=A0YVN1_9CYAN Length = 1252 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 7/224 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 V ++A L + + ++ ++ + V + + + + K Sbjct: 1030 LCVPMMAQGNTLGLLYIATLTPGQLTP-AKRQLARTVVEHLAIALANVKLQE---KFKAQ 1085 Query: 282 AHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RD LT +FNR Y L + A ++++DIDHFK+ ND +GH GD+V+K Sbjct: 1086 SMRDALTGLFNRRYLEESLEQEIHRARRNHYSVGIVMIDIDHFKRFNDQFGHDAGDEVLK 1145 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 TV ++ SIR D+ R GGEE ++L + +A +E+IR +E L ++ Sbjct: 1146 TVARLLQGSIRSSDIACRYGGEELTLILPEASLSDTQARSEQIRYMIEHLQLHYENQSLG 1205 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 +T S G E+ + R+AD ALY+AK GRN+VV Sbjct: 1206 -SITASFGVACFPEHGETLEAVLRIADTALYQAKALGRNRVVCA 1248 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 12/245 (4%) Query: 208 SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIF 267 + L+ V+ A LL ++ I ++S++T+ Sbjct: 1051 IALCHRELLKRYQVKANLVLPVVAFDQLWGLLIAHDCHQPRKWLDHEITLLSQITITAAI 1110 Query: 268 M-------CHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMD 318 + +A K ++ D LT + NR+ F L + + +++ D Sbjct: 1111 AIHQGELHQQLQNANLELKKLSAIDGLTQVANRHRFDVYLEQEWRRLMRSRHSLSLILSD 1170 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKA 377 +DHFK NDT+GH GD ++ + +I S+ RP DL+AR GGEEF ++L + + A Sbjct: 1171 VDHFKWYNDTYGHLAGDHCLQQIARVIKTSVGRPADLVARYGGEEFAIVLPETSLKGALF 1230 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALYEAKETG 436 +AE+IR+ V+ LT + + A Q VT+S+G AL+P + AD ALY+AK G Sbjct: 1231 VAEQIRQKVKNLTIPHTKSAY-QCVTLSLGVASLIPSGALSPKALINAADEALYQAKANG 1289 Query: 437 RNKVV 441 R++VV Sbjct: 1290 RDRVV 1294 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 118/302 (39%), Gaps = 19/302 (6%) Query: 165 AHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGV 224 A L++ Y L + + S +I F+++ L S + + L Sbjct: 302 ALNLTTRPLIYTLAELCNDPQYHLLSKAFSNQSIQSFLFIPLRSRSQWVGCLTLFRQERE 361 Query: 225 TVIAFCAVLYNISLLFMSRYSVSTW---------YISRTIEVVSKLTVMVIFMCHIFSAL 275 + M R S W + +++ L + + + Sbjct: 362 WETLWAGRENPDQRNQMPRQSFVAWCEIQRGVPDWTGEQLKLAEILGLHLYMILTQQRLT 421 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + + A DP+T + N F + L + A+ V+I+D++ FK++ND+ GH V Sbjct: 422 HLIHHQASYDPITQLPNWIIFNHRLALALVDATHGSNMLGVLIIDLNQFKRINDSLGHGV 481 Query: 334 GDQVIKTVVNIIGKSIRPDD----LLARVGGEEFGVLLTD-IDTERAKALAERIRENVER 388 GD +++ + + + LLAR G F VLL+ + A ++++ + + Sbjct: 482 GDYLLQKASDRLQNCLESYSFLEPLLARWHGAGFIVLLSQLAYVDEAINFSQKLLNDFQE 541 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + + +SIG + + + + + A++A+Y+AK+ G+N + + Sbjct: 542 ---PFYVQSQAIYLGVSIGIALAPYDGDSSEVLLKNAESAMYQAKQQGKNTYQLYRPGSN 598 Query: 449 CE 450 + Sbjct: 599 QD 600 >UniRef50_A1WTZ7 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Proteobacteria RepID=A1WTZ7_HALHL Length = 308 Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 5/180 (2%) Query: 270 HIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVND 327 + + ++ RD LT++ NR +L + + Q+ TP V++MDIDHFK ND Sbjct: 129 DLKRKTDALERLSQRDGLTDLPNRRVLDRQLPEEWSRCQRGDTPLSVIMMDIDHFKPYND 188 Query: 328 TWGHPVGDQVIKTVVNIIGKS-IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 +GH GD+ ++ V ++ R DL+AR GGEEF LL D A +AER R V Sbjct: 189 HYGHGAGDECLRRVARVLANVPSRTTDLVARYGGEEFIALLPYTDAPDAWQMAERFRAAV 248 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQEN--ALNPNEIYRLADNALYEAKETGRNKVVVRD 444 L + + +T+S+G + +P ++ AD ALY AK+ GRN+V Sbjct: 249 AALQLPHGHSSTDGIITMSVGVASHTADRPYDSPEQLLEAADQALYAAKKAGRNRVQAAQ 308 >UniRef50_C7LTU2 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTU2_DESBD Length = 339 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 5/183 (2%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDI 319 ++ + A ++ D LT I NR F L + + + ++++DI Sbjct: 150 AKILQRTRELEEANHRLSELSLTDGLTGIANRRRFDAALAEEWSRSARTGSTLALIMLDI 209 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKAL 378 DHFKK ND +GH GD ++ V ++ S R DL++R GGEEF ++L D A + Sbjct: 210 DHFKKYNDHYGHQQGDDCLRRVAEVLRSSARRQGDLVSRYGGEEFCMILPDTALPGAFEI 269 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGA-VVTQENALNPNEIYRLADNALYEAKETGR 437 AER+R VE + + + +VT S+G A++P E+ R AD +LY+AK GR Sbjct: 270 AERLRREVENMDMPHVLSDVG-RVTASMGVAASMPCKAMSPAELLRRADESLYQAKSEGR 328 Query: 438 NKV 440 N V Sbjct: 329 NCV 331 >UniRef50_A0L4D8 Diguanylate cyclase n=2 Tax=cellular organisms RepID=A0L4D8_MAGSM Length = 464 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 7/201 (3%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYC 313 E ++L + + + L+ K + DPLT + NR F LT + P Sbjct: 262 ESQAQLDLTRKQLQQVQDDLKKAKEESLTDPLTQVANRRALFQSLTRETARTRRYGEPLS 321 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 ++I+D+DHFKK+NDT+GHPVGD+V+K V +R D LAR GGEEF LL + Sbjct: 322 LIIIDLDHFKKINDTYGHPVGDRVLKEVAGHARALLRDSDTLARYGGEEFVALLPETTLP 381 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN---ALNPNEIYRLADNALY 430 +A AE+IR +V + ++ ++ S+G + N AD ALY Sbjct: 382 QAMEKAEQIRLSVAAMRFKLKGESL--SISASLGVAQLDDGASQDANNEAFVHRADQALY 439 Query: 431 EAKETGRNKVVVRDVVNFCES 451 AK GRN V+ D +S Sbjct: 440 RAKSGGRNCVIQADPTPASDS 460 >UniRef50_B0C2A7 Diguanylate cyclase (GGDEF domain), putative n=4 Tax=Cyanobacteria RepID=B0C2A7_ACAM1 Length = 368 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 6/204 (2%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTP 311 + V + A + +A D LT + NR F L + +K+ Sbjct: 157 LRQRVRIQLERTQLHKQLEEANKRLTYLASVDELTQLPNRRAFTEALNREWRRMAREKSS 216 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR-PDDLLARVGGEEFGVLLTDI 370 ++++DID+FK NDT+GHPVGD + V +I +R P DL +R GGEEF V+L + Sbjct: 217 LALIMIDIDYFKVYNDTYGHPVGDSCLFQVARVIHTCVRRPADLPSRYGGEEFAVILPNT 276 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE---IYRLADN 427 A +AE +R +V+RL + A V++S+G + + AD Sbjct: 277 TLSGAIHVAENMRLSVQRLMIPHKNSANGPYVSLSLGVASVIPDIQEMESETPLLLAADQ 336 Query: 428 ALYEAKETGRNKVVVRDVVNFCES 451 ALY+AK GRN+V V ++ ES Sbjct: 337 ALYKAKAEGRNRVCVDQTLSTIES 360 >UniRef50_A1K7E0 GGDEF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7E0_AZOSB Length = 471 Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats. Identities = 96/459 (20%), Positives = 167/459 (36%), Gaps = 32/459 (6%) Query: 6 LRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYF 65 LR++ LL +L + + + VPR + + +A F Sbjct: 17 LRLTRLYERGLLLAFSLSPLVAILYLHHFQADVPRFEH-----HVAHELAIALAIGVSAF 71 Query: 66 IYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYY-LFRQMSLC 124 + AFL L +I ++ S D + Y + + Sbjct: 72 VCYVTLRCYESSGEAFLRWLTLGLIGFTVVYAPHGVLTRLSAHHLDWFLLYGPASRFVMA 131 Query: 125 ILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVA------HILSSHY-ESYNL 177 + A + + + F+ +VA H+L + Sbjct: 132 ACLLRAAMLYGEAPEPRCARPRARQWAGWIGLFLGVDLVVAQLSFHPHLLPLPVRPVFEA 191 Query: 178 HIAELTNENGQVVWKASYVTIMIFMWLTLLSVNL-------------YFNGLRYDIWNGV 224 ++ + +I + L + + L + ++ Sbjct: 192 CAILFALAAAGLLLRKGASAPLILVTAIALGMFAQSSVAFMLSSAWDHIWWLAHAVFASG 251 Query: 225 TVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHR 284 ++ V+ S + R + V + + + + A + +A Sbjct: 252 FLLLSFGVVRAFHTTRAFSTVFSQEEMMRQLYVEKERAESALAL--LRQANADLRRLAAT 309 Query: 285 DPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 DPLT NR F L + A ++ P ++ +DIDHFK +ND GHP GD +KT V Sbjct: 310 DPLTGASNRRQFMATLASEWARARRERAPLALLALDIDHFKHINDRHGHPAGDHALKTFV 369 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + +RP D++ R+GGEEF ++L A +AERIR VE L D +P + Sbjct: 370 SAAAGLLRPGDVIGRIGGEEFAIVLPGTQAADAHGIAERIRHGVEALALDIDG--VPVAL 427 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 T+S+G V+ + P ++ + AD LYEAK GRN+V Sbjct: 428 TVSVGVAVSGPSCTEPGDLLKEADRRLYEAKNAGRNRVC 466 >UniRef50_B5VVN4 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VVN4_SPIMA Length = 652 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 11/220 (5%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCH-------IFSALRVTKNIAHRDP 286 LL + + + + IE + + + + + + + +A D Sbjct: 428 CLWGLLVIHQCDNTRGWQPEEIEALRSIATPIAVAIQQGELHAKLQTVNQELERLASLDG 487 Query: 287 LTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNI 344 LT + NR F L + + P V++ D+D FK NDT+GH +GD+ +K + I Sbjct: 488 LTGVANRRQFDLHLKREWQRLLRETAPISVIMCDVDFFKAYNDTYGHQMGDECLKQIAKI 547 Query: 345 IGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVT 403 + R DL +R GGEEF ++L + + A +A++I+ + L ++ + + VT Sbjct: 548 LENCAQRSTDLASRYGGEEFVIVLPNTGIKGALQVADKIQHQIRALEIEHQKSEVSGYVT 607 Query: 404 ISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVV 442 +S+G + +P + +LAD ALYEAK GRN ++ Sbjct: 608 LSLGVACQVPNHDRSPESLIKLADAALYEAKSKGRNCIIA 647 >UniRef50_B5JX81 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX81_9GAMM Length = 384 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 74/325 (22%), Positives = 140/325 (43%), Gaps = 14/325 (4%) Query: 121 MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISL-FFVFGGPIVAHILSSHYESYNLHI 179 + + +L + + ++ K+ I + FFV ++A+ + + Sbjct: 68 IVILVLAACCGIGFILGFKADATAWTSKLYAHICIQFFVAVNMVLAYYAGVFSVVSGVAL 127 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 + + + + L L+ + + L + V + +N + L Sbjct: 128 VGGSLTGFILFNERVVYGGLFTGALATLA-LIILSALEVIPYASVIETNGTPLHHNATWL 186 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + +ST YI + + S + + ++ DPLT + NR + Sbjct: 187 IL-LLGLSTPYIGLLVAMNSS------AIRRWRQRESEVRQLSTTDPLTQVANRRHLLER 239 Query: 300 LTVQSASAQKT---PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356 L ++ + +++ +++MD+DHFK +ND GH GD+ ++ ++ + R DL+ Sbjct: 240 LNLEISRCERSGHSELSLLMMDLDHFKSINDEHGHLFGDEALRVTARVLREQSRNTDLVG 299 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R GGEEF +LL D + A +AER R+ +E+ D + + +T SIG Q Sbjct: 300 RYGGEEFCLLLPDTGPQGALQIAERCRQALEQADIDREDGEV-LHITTSIGLATYQMGDT 358 Query: 417 NPNEIYRLADNALYEAKETGRNKVV 441 N + AD ALY+AKE GRN++V Sbjct: 359 N-ESLLHRADEALYQAKEQGRNRIV 382 >UniRef50_C9YCX8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCX8_9BURK Length = 600 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 80/473 (16%), Positives = 161/473 (34%), Gaps = 45/473 (9%) Query: 7 RISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFI 66 + + V + + + L++ + +P ++E L + F M ++ Sbjct: 140 QATQVVYLRVQSTIGLIVPVQLWARPDLDEHTHTDYMLHAWYYGMATAMLVFNLML--WV 197 Query: 67 YDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCIL 126 R + + F+ + + + + + + S+ Sbjct: 198 ALRDRIYGYY--VVFVGATALMLASKAGLASQYFWPGAL-----VWSNFSYYTAASVGAA 250 Query: 127 IFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNEN 186 F ++ + + + ++ + I + L + + Sbjct: 251 AFCLFTRRMLDTATVLPRVHRALQALAAVHLLAPLVYWFAITPVARYATLLFLLTVLAVT 310 Query: 187 GQVVW---------------------KASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVT 225 W + T F WL + + L ++ + Sbjct: 311 AVGAWCAFLRMRSGYYFLGAFGMLAVGSLVTTARSFGWLPTNAFTVNGFQLGSNLEMLLL 370 Query: 226 VIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM--------CHIFSALRV 277 A + + ++ +S ++V L + + A Sbjct: 371 AFALAD---RFNQMRREKHMAQRELVSTQQQLVETLRASEQELAQRVEERTRQLQVANER 427 Query: 278 TKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + ++ D LT I NR +F L + P ++++D+D FK+ ND +GH GD Sbjct: 428 LEALSMVDGLTGIANRRHFDQVLHKEWTRLERAGQPLALVMLDVDWFKRYNDHFGHQAGD 487 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 + ++ V I R DL+AR GGEEF ++ D +A +A+R + V L +P Sbjct: 488 ECLRAVAQAISGVSRASDLVARYGGEEFVIIAPGTDGPQALQMAQRACDAVRALGMPHP- 546 Query: 396 YAIPQKVTISIGAV-VTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 A VT+S G + + AD+ALYEAK GRN+VV+ + + Sbjct: 547 LAYEAVVTVSCGVAVTVPGPDDSLENLLGQADDALYEAKAQGRNRVVLAEPLG 599 >UniRef50_B5W0E3 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Arthrospira RepID=B5W0E3_SPIMA Length = 1380 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 6/210 (2%) Query: 235 NISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRN 294 + L + + + V++ M I ++ + ++ + RDPLT +FNR Sbjct: 1173 GLFYLSTDSATALSEGKQQLAHTVAEQIGMAIANLNLRAT---LEHQSIRDPLTGLFNRR 1229 Query: 295 YFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 Y L+ + A QK P V++MDID+FK NDT+GH GD V++ V ++ + +R Sbjct: 1230 YLEEYLSQEIARAQRQKHPIGVIMMDIDNFKHFNDTFGHDAGDYVLQKVGELLKQKVREY 1289 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 D+ R GGEE ++L E AE+IRE + L + + +T S G Sbjct: 1290 DVACRYGGEEMTLILPGSSLENTSMRAEQIREAIASLVVASGGQHLG-SITASFGVAAFP 1348 Query: 413 ENALNPNEIYRLADNALYEAKETGRNKVVV 442 ++ ++ + AD ALY AK GRN+VV+ Sbjct: 1349 KHGSIGIDLIQAADAALYRAKADGRNRVVI 1378 >UniRef50_B5W1M1 Diguanylate cyclase with PAS/PAC and GAF sensors n=4 Tax=Arthrospira RepID=B5W1M1_SPIMA Length = 1068 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 8/291 (2%) Query: 157 FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGL 216 V H L+ + +A+L+ ++ + + ++ + V Sbjct: 779 IVTEDCWTPHYLAGFSQGQVQAMADLSTQD----FSQCDIRLLSEFQVQANLVVPILTRR 834 Query: 217 RYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALR 276 R D + +A LL + S + S ++ + +L V + + Sbjct: 835 RSDTSAELGFVASEPYNRLWGLLMVQHCSGPRQWESTAVDFIKQLAVQLGIAIQQAELYQ 894 Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + +A D LT + NR F L + + TP +++ D+D FK NDT+GH G Sbjct: 895 QLERLATLDGLTQVPNRRQFDTYLITEWRRCIREFTPISLILCDVDFFKHYNDTYGHQEG 954 Query: 335 DQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDN 393 D+ ++ V + +SI RP DL+AR GGEEF ++L + D E +A IRE + +L + Sbjct: 955 DRCLQEVAQALTRSIRRPGDLVARYGGEEFAIILPNTDAEGMCNVAGTIREQILQLQRIH 1014 Query: 394 PEYAIPQKVTISI-GAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 I + +++S+ G V + + + +AD ALY+AK GR++ V+ Sbjct: 1015 ETSPISEYISVSMGGVSVLPNSNMQLEHLISMADTALYQAKAQGRDRFVMH 1065 >UniRef50_A4BI17 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BI17_9GAMM Length = 606 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 85/422 (20%), Positives = 160/422 (37%), Gaps = 27/422 (6%) Query: 46 VMIALFFIDTVAFIF--MQLYFIYDRRQFSNCVLSLAFLSCL-IYFVITVIIIQQIIEER 102 + A+FF + +F + LY + Q + AF F + Sbjct: 194 TIRAVFFGIGLFVVFQNLLLYLRHRSDQSFLLLSVFAFAGIARSAFASNYVTYFVNQPWF 253 Query: 103 LTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGP 162 +V I I + + L ++ + N + + + + Sbjct: 254 SIPAVKIEYILILW----PGIAALHYVCHLFPWRWNRLLLSTSYLILAVASIYTLLAPMV 309 Query: 163 IVAHILSSHYESYNLHIAE---------LTNENGQVVWKASYVTIMIFMWLTLLSVNLYF 213 V++ L + L + L + S + ++I M +++ + Sbjct: 310 EVSYYLLVYNALLVLIVLAAVCVVIHGMLRRHEMAFFFSRSVIPLIIAMLNDIVAAS--- 366 Query: 214 NGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTI--EVVSKLTVMVIFMCHI 271 + +I F + + ++S + EV K + + + + Sbjct: 367 TPDYNFYFAEYALILFLFIHTQRQAVQFVTALRVAEHLSNNLQREVELKTSELSLRNREL 426 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQSASAQKTPYCVMIMDIDHFKKVNDTW 329 + + K ++ D LT ++NR N + A + +++MDIDHFK +ND + Sbjct: 427 EAKHQRVKLLSQTDHLTGLYNRQSLDNRTKALFEQAEQSDSHLSLIMMDIDHFKPINDRF 486 Query: 330 GHPVGDQVIKTVVNIIGK-SIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 GH VGD+ + V + + ++R DL+AR GGEEF ++L D E A+ L E + + + Sbjct: 487 GHQVGDECLVHVASFLRGLNLRHKDLIARFGGEEFTIVLPDTSIEHAQHLIEDVCTRLSK 546 Query: 389 LTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 T ++T S G A + E+ + AD ALY+AK+ GRN+V V Sbjct: 547 ETVS--GSHYEIQLTASFGIAERVISQAPSYEELIQKADQALYQAKQNGRNRVEVYQSDT 604 Query: 448 FC 449 Sbjct: 605 PE 606 >UniRef50_B8FCK6 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCK6_DESAA Length = 301 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 5/203 (2%) Query: 242 SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL- 300 S Y + + V+ + + R + +A+RD LT ++N YF + + Sbjct: 99 SDYVTKPFEEGELVARVNTHLRIKELYESLQETNRQLQELANRDGLTGLYNHRYFQDAMT 158 Query: 301 -TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVG 359 Q A ++ DID FKK NDT+GH GD V+ T+ I+ S+R DL AR G Sbjct: 159 KDFQRAMRYHESLSCVLCDIDFFKKFNDTYGHQTGDIVLSTLARIVEDSLRDTDLAARYG 218 Query: 360 GEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ-ENALNP 418 GEEF ++L A +AER+RE+VE+ + + VTIS+G + + Sbjct: 219 GEEFALVLYHTPAAAAFMVAERLRESVEQHEFIAND--LSLSVTISVGVATYPHPDIPDH 276 Query: 419 NEIYRLADNALYEAKETGRNKVV 441 + AD ALY+AKE GRN+V+ Sbjct: 277 KTLIECADKALYKAKENGRNQVI 299 >UniRef50_C8R1M6 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1M6_9DELT Length = 396 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK 309 +E ++ + + ++ DPLT +FN F+N L + + Q+ Sbjct: 197 LTKAELETFQTVSYQLGLAIDNARLYETVRRLSIYDPLTGLFNHGQFYNLLAEELSRHQR 256 Query: 310 --TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 P ++++DIDHFKKVNDT+GH GD V++ + ++ K R D + R GGEE ++L Sbjct: 257 TGRPLSLLMLDIDHFKKVNDTYGHRAGDAVLQQLSGLLKKQARAIDRVCRYGGEELALIL 316 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 + D E A+ AER+R +VE+ VT+SIGA + A++ + AD Sbjct: 317 PETDREAARQTAERLRRHVEKCCFATCGQQ-EIGVTVSIGAATCPDAAISAETLVNAADR 375 Query: 428 ALYEAKETGRNKVV 441 ALY AK GRN+V Sbjct: 376 ALYAAKRAGRNRVC 389 >UniRef50_Q2RR54 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR54_RHORT Length = 582 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 95/425 (22%), Positives = 171/425 (40%), Gaps = 18/425 (4%) Query: 31 QPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVI 90 Q +V + M+ +FF+ ++ + Y ++ L F I Sbjct: 158 QAVSPDVAADTDSRRDMVMVFFVTSMILMIFWGVNEYSFDRYRIFALFCIHQLAFTLFGI 217 Query: 91 TVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMT 150 + + + +V D A Y+L+ +S +++F + + + + +K + Sbjct: 218 SAVGYFSPFWVMIFPGIV--DRAFYFLYMSISFTLILFCREL---FKPYQPHPVLAKGLD 272 Query: 151 LCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVT-----IMIFMWLT 205 L F + ++A + S L I V + + ++ Sbjct: 273 LARWAFPLQIIALIAGYDALAVISNALLIKGALFYFVFVAFSLKVDLDPTRRTLRIFFIG 332 Query: 206 LLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 + +NL F + + + + AV + F+ + R +V + Sbjct: 333 IALINLIF-WMTPRVGGELKWLGLSAVQALVIDGFVMGILFAWLAHGRGRQVREDAQRKI 391 Query: 266 IFMCHIFSALRVT----KNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDI 319 + + A R + A D LT + NR FF + A P V+++DI Sbjct: 392 RLVKESYLAERDLKARAEREARVDYLTGVLNRRSFFELAEGELARSIRFGRPLAVLMIDI 451 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 D+FK VNDTWGH VGD+V++ V +IG+++R D+ R GGEEF ++ + A +A Sbjct: 452 DYFKAVNDTWGHGVGDEVLQNVAGLIGQTLRGADIFGRTGGEEFTAVIVEASGSEALEVA 511 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 +R+ V + P VT+SIG + + + + R AD A+Y AK GRN+ Sbjct: 512 QRLCAVVAQGKIVGPGGE-AIGVTLSIGVSLLRGRDMAFEILSREADQAMYGAKRAGRNR 570 Query: 440 VVVRD 444 VVV Sbjct: 571 VVVHR 575 >UniRef50_B1WQB8 Putative diguanylate cyclase n=2 Tax=Cyanothece RepID=B1WQB8_CYAA5 Length = 493 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM----CHIFSALRVTKNIAHRDPLTNIF 291 + L S + W E+ + + + AL+ K + + D LT IF Sbjct: 274 VGKLATSMNQLIQWIDEHITELKEARQTLEKRVEQRTIELQQALKKLKALVNLDGLTQIF 333 Query: 292 NRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR YF L Q +K+ +++ D+D+FK N+T+GH GD ++ V I + + Sbjct: 334 NRRYFDEVLYREWQRGRREKSVISLILCDVDYFKIYNETYGHLGGDSCLQEVAQGIRRQV 393 Query: 350 -RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 RP DL+AR GGEEF +LL + D A ALAE IR +E + + + VTIS+G Sbjct: 394 KRPSDLVARYGGEEFVILLPNTDLNGALALAEMIRNAIEAMNIPHENSLVSDHVTISMGV 453 Query: 409 VV-TQENALNPNEIYRLADNALYEAKETGRNKVV 441 + + AD+ALY+AKE GRN V Sbjct: 454 TSKIPQETDEYEHLIEEADDALYQAKENGRNCVC 487 >UniRef50_Q21R75 Diguanylate cyclase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R75_RHOFD Length = 498 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 81/296 (27%), Positives = 133/296 (44%), Gaps = 12/296 (4%) Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY 218 G +A + + S+ +A LTN W + ++ + L+ V + Sbjct: 57 LLGLFMAALEFPLWLSFAAIMATLTNNAANKGWPSVPKNVLAMLAGALIWVTVRGFKFSP 116 Query: 219 DIWNGVTVIAFCAVLYNISLL-------FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHI 271 D +T+ + + ++ + V +R E++ +V+ + I Sbjct: 117 DTGWPLTIFCMVGICGYVLVIGNVGFQRNLQLRRVREELRTREQELLKANQSLVVNLQEI 176 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTW 329 + + + A RD LT ++NR Y L + A + P ++++D+D FKK ND Sbjct: 177 EALQQQLREQASRDSLTALYNRRYLDTTLDRELASCKREGKPLSLIMIDVDDFKKYNDLH 236 Query: 330 GHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 GH GDQ + V + S R DL AR GGEEF ++L +D A+ LAE +R +VE Sbjct: 237 GHQAGDQCLIAVAKTLQASAKRASDLAARYGGEEFLLVLPGMDATAAQGLAEELRRSVEA 296 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVVVR 443 L + + VTISIG V ++ + + R AD ALY AK GRN+V + Sbjct: 297 LKIPHEQSR-GGSVTISIGLAVMTNDSHKDVAGLLRAADEALYHAKHGGRNQVRLA 351 >UniRef50_Q98G89 Mll3440 protein n=1 Tax=Mesorhizobium loti RepID=Q98G89_RHILO Length = 426 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 4/254 (1%) Query: 191 WKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWY 250 W + L + + + + A L + L W Sbjct: 156 WALRRGQEHVAGPGMLTPRCNHITENGGRGYVCMPLAAQGETLGIVHLCEPDAADRPDWL 215 Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 R +++ + + + + RDP T ++NR Y + + Sbjct: 216 TERQ-QILRGVVDTLALALANLRLRETLRQQSIRDPNTGLYNRRYLEETSSRELRRMERS 274 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P ++++D+DHFK+ NDT+GH GD V+K V + R D+++R GGEEF +++ Sbjct: 275 GQPLAMIMLDVDHFKQFNDTFGHEAGDLVLKQVAATLLDHARESDVVSRYGGEEFALMMP 334 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 A AE +R+ +++L + + +T S G E + EI AD + Sbjct: 335 GTSLADAAERAEALRKAIKQLHLTHRGRTLG-TITASFGVSAFPELGASWVEIVNAADRS 393 Query: 429 LYEAKETGRNKVVV 442 LY+AK GR++VV Sbjct: 394 LYQAKADGRDRVVA 407 >UniRef50_B7KGI8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGI8_CYAP7 Length = 1079 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 6/214 (2%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 + L S + + VS+ + + + + K + +D LT+++NR Sbjct: 866 VGLFYLSASEPDKLSEVKQQLARAVSEHISLALVNLQLRES---LKAQSIKDSLTDLYNR 922 Query: 294 NYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 Y L + A ++ ++++D+DHFK+ NDT+GH GD V++ V N + ++R Sbjct: 923 RYMEESLKREISLAQRKQHSVGLIMIDVDHFKEFNDTFGHKAGDLVLQEVSNFLMINVRS 982 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D+ R GGEEF ++L + ++ AE+IR+ +++L + + + VT+S+G Sbjct: 983 GDIACRYGGEEFLLILPEASLTDSQQRAEQIRQGIKQLDFKRYDQSF-RSVTVSVGVASF 1041 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 ++ N +++ + AD ALY+AK+ GR++VVV Sbjct: 1042 PDHGTNNDQLIQAADTALYQAKKQGRDRVVVFSP 1075 >UniRef50_B8DJ36 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJ36_DESVM Length = 698 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 101/179 (56%), Gaps = 5/179 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 + +A D LT + NR +F L + A P V+++D DHFK +NDTWGH G Sbjct: 506 RLEQLATTDELTGVANRRHFMARLEDEAARAQRYGRPLSVLLLDADHFKSINDTWGHEAG 565 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ + +++G S+R +DL+ R+GGEEFGVLL + ERA AERIR VE Sbjct: 566 DMVLRHITDVMGLSLRENDLIGRLGGEEFGVLLPETAQERALRTAERIRAAVEDAPVAVR 625 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFC-ESP 452 + + T+S+GA + + +++ R AD+ L AKE GRN+V + C ESP Sbjct: 626 DVWVG--CTVSVGAAEYRGANDSLDDLIRRADHMLMRAKEEGRNRVCAQQARPACAESP 682 >UniRef50_A8UWP4 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWP4_9AQUI Length = 425 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 157/400 (39%), Gaps = 20/400 (5%) Query: 59 IFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVI--TVIIIQQIIEERLTSSVVQNDIAIYY 116 + + + R F N L+ + I ++ + + I++ + I + Sbjct: 38 LTLLRFSSIIERAFQNYYLAKNIWNIRIAVIVGVVMYALFSILDAIAFPQLKTQLWMIRF 97 Query: 117 LFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHI-LSSHYESY 175 LF + +L + +N + + L L V +++ +Y Sbjct: 98 LF-VIPFGVLFL--FLTFKIQNERLIEFLHSLLVLIGGLGIVAMIYLISGDKYYLYYPGL 154 Query: 176 NLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYN 235 L I + + A+ + + + ++ + L I N + + + Sbjct: 155 MLVIFYAFTLSALRFYYATASVLALLLTYPVVDLYLLKTPEELHITNMFFLTSSALLGMP 214 Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 +S L ++ ++I+ D LT + NR Sbjct: 215 VSYLLERHARKD----------FLLTMLLAFEKRKTDELNVRLRDISFIDGLTGVANRLR 264 Query: 296 FFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD- 352 F + + A K P ++++DID FK ND GH GD+ +K V I IR D Sbjct: 265 FDDFFRKEWRRARRTKRPISILMLDIDFFKNYNDLLGHLEGDECLKNVAKTIQSHIRADV 324 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-T 411 DL+AR GGEEF V+L + D + A +AERIR ++E L +P + + VT+SIG Sbjct: 325 DLVARYGGEEFVVVLPETDLKGALKVAERIRRDIEGLKIAHPGSQVSKFVTVSIGVASIV 384 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 + L + +AD ALY AK+ GRN+V + ++ Sbjct: 385 PIDNLKKEVLLNMADKALYVAKKRGRNRVEAYSIEMEGKA 424 >UniRef50_Q2BMK3 Serine/threonine kinase with two-component sensor domain n=3 Tax=Bacteria RepID=Q2BMK3_9GAMM Length = 1723 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 119/288 (41%), Gaps = 4/288 (1%) Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY 218 +++H+L + S L+ A + + IF + Sbjct: 1430 LPITVISHVLRT-SSSLILNDASNDSPFMDDPYMVHQKPGSIFCVPLQRGNIQGVVYMEN 1488 Query: 219 DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVT 278 ++ V + V+ ++ + Y S + + Sbjct: 1489 NLSTDVFTESRLEVVSLLTDQATVAIENAGLYEQVQEYTHSLEEKVAERTAQLEELNEEL 1548 Query: 279 KNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQ 336 K + D LT + NR F L ++ P +++ D+D+FK NDT+GH GD Sbjct: 1549 KKLVDSDGLTGLANRRCFDTYLARTWLRLRREQNPLSIVMFDVDYFKTFNDTYGHQSGDD 1608 Query: 337 VIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 + + + + I RP DL+AR GGEEF V+L D D E A A+A +I V L + Sbjct: 1609 CLVMLAKTVREQIQRPADLVARYGGEEFIVVLPDTDEEGAMAVAGQICVAVASLKIPHCN 1668 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + VTIS+G T + P+ + LAD ALYEAK+ GRN+V + Sbjct: 1669 SVVADHVTISVGVATTCPDTQGPDSLIELADQALYEAKKQGRNQVKLA 1716 >UniRef50_Q1NKN5 GGDEF:Response regulator receiver n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKN5_9DELT Length = 333 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 4/220 (1%) Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIF 291 +L + +F+ ++ E+ S++ ++ + A R ++ D LT + Sbjct: 114 ILRSKVDIFLELDRQRRQLAHKSAELDSRVRDLLALKEQLEEANRKLNELSLTDGLTGLA 173 Query: 292 NRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR F L + + +++ DID FK+ NDT+GH GD + + +I + Sbjct: 174 NRRSFQEALQTEWRRAMRNRHFLTLILADIDSFKQFNDTYGHVAGDDCLVQIAKVIKSPL 233 Query: 350 -RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 R DL+AR GGEEF +LL D D + + LAE IR VE+L D+ A VT+S G Sbjct: 234 MRSSDLVARYGGEEFAILLPDTDLKGGEHLAEEIRREVEQLEIDHENSATGAHVTMSFGV 293 Query: 409 VVTQENALNPN-EIYRLADNALYEAKETGRNKVVVRDVVN 447 ++ AD ALY AKE GRN+V+ +D Sbjct: 294 ASVVPRLDLVELDLVCAADKALYAAKEDGRNQVLTQDKSP 333 >UniRef50_Q39S35 Diguanylate cyclase with GAF sensor n=2 Tax=Geobacter RepID=Q39S35_GEOMG Length = 686 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 2/240 (0%) Query: 213 FNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIF 272 + + + + +V ++L + T + + ++I Sbjct: 434 RPRFKTKSFVSIPIKLRESVAGVLNLSDKKNQGIFTENDLNLLITFADHASIMIERALSI 493 Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWG 330 + ++ DPLT ++NR + + + A Q VM++D+D+FK ND G Sbjct: 494 ERADFLEQLSITDPLTGLYNRRFLKRRMEEELARSIRQNLSLTVMLIDLDNFKIYNDLCG 553 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD+ +K + I+ + R D++ R GGEEF ++L + + +AERIR +E Sbjct: 554 HLAGDRALKKMARILSDTARQMDVVTRYGGEEFCIILPGTSKKESLFVAERIRREIEGEE 613 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCE 450 + E ++T SIG E+ + + AD ALY AK GRN+VV+ E Sbjct: 614 FSHEENLPQGRLTASIGVSSFPEDGNVEAVLVKAADVALYRAKSEGRNRVVISGPPPAEE 673 >UniRef50_D1U9C4 Diguanylate cyclase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9C4_9DELT Length = 498 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 9/233 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + + A + LL Y + + V+ L + K Sbjct: 269 VTMPLTAAHETFGCLVLLCEPDYRLGRDQVETFRSAVNHL----GLALRNALIFKEVKLR 324 Query: 282 AHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A RD LT I+NR+ F L ++ ++++D+DHFK+VNDT+GH GD V++ Sbjct: 325 ADRDGLTRIYNRHSFDERLIYEIKRRRRYNHDLSLLMVDLDHFKQVNDTYGHKAGDMVLR 384 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V I+ ++ R DL AR GGEEF VLL E A LAERIRE+++ + Sbjct: 385 KVGEILTETFRTTDLAARYGGEEFVVLLPHTSEEAAWKLAERIRESIQGCVFRFDGHEF- 443 Query: 400 QKVTISIGAVVTQENALNP-NEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 VT SIG + AL +++ AD ALY+AK GRN VV+ ++ Sbjct: 444 -SVTASIGVASVEAGALTRDDDLLIKADKALYKAKNNGRNMVVISRPEGAAQA 495 >UniRef50_A1HTU0 Diguanylate cyclase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTU0_9FIRM Length = 491 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 2/192 (1%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPY 312 ++++ L + + + + A D LT ++N YF + K P Sbjct: 294 LDLLRSLASQISMTIAHANHVSRVELQAITDGLTGLYNYRYFQTLFEREFKRAVRYKRPL 353 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 ++++DID+FK NDT+GH GD +I+T+ II ++ R D++ R GGEEF VL + Sbjct: 354 SLLMIDIDYFKLYNDTYGHRQGDHIIRTIAKIIRQNCRDVDIVVRYGGEEFAVLFPETTV 413 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 + A +AERIR V N +T+S+G +A + E+ AD ALY A Sbjct: 414 DEAFKIAERIRMAVAEYPFANKHSQPGGILTVSMGVAGYPYDAQSETELIDHADMALYRA 473 Query: 433 KETGRNKVVVRD 444 K T +N+V + Sbjct: 474 KRTSKNRVCLYR 485 >UniRef50_Q2VYV6 FOG: GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VYV6_MAGSA Length = 578 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 4/186 (2%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMI 316 + +++ + + +A D LT IFNR +F ++ A P ++ Sbjct: 394 EGVIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRPLVALM 453 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 +DIDHFK++NDT GHPVGD IK + ++ + IR +D+L R+GGEEF ++LT+ D + A Sbjct: 454 LDIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETDLDGAL 513 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 +AER+R+ V + + T SIG E + I AD ALY AK +G Sbjct: 514 LVAERLRQAVAAIRIPAELGTVA--FTTSIGVAERLEGDATIDTILSRADMALYSAKRSG 571 Query: 437 RNKVVV 442 RNKV V Sbjct: 572 RNKVAV 577 >UniRef50_Q1MYJ5 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1MYJ5_9GAMM Length = 642 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 100/470 (21%), Positives = 176/470 (37%), Gaps = 59/470 (12%) Query: 32 PGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVIT 91 V + + + + F+ F M L V +LS + Y + Sbjct: 173 TQVPLTIWSWSDFISNSIIHFLFQGFFYGMVLIMALYNFVVWLIVRQRVYLSYVAYILF- 231 Query: 92 VIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILI-FLALVNKVSENTKQRNLFSKKMT 150 + + Q + V + + +SL +L+ ++ + + K+ + ++ Sbjct: 232 LTLFQISLHGLGMLYVWKEYTWLNEYITTISLILLLASISFFIRDFFDIKKYSPNLSRLV 291 Query: 151 L-----CISLFFVFG----------GPIVAH---ILSSHYESYNLHIAELTNENGQVVWK 192 L + L VF G A +L + Y L+ ++ V W Sbjct: 292 LCSFYWYLLLSIVFIFIPYSISIRIGAFFAWTQILLIIYITLYMLNRGHPSSRYFAVAWA 351 Query: 193 ASYVTIMI-----FMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVS 247 + ++ F +L + + Y + + +A + N +S + S Sbjct: 352 VFLIGALLLALNKFAFLPITLASEYGLQIGAGLEIMFLSLALADRMANTQREKISAQARS 411 Query: 248 TWYISRTIEVVSKLT--------------------------VMVIFMCHIFSALRVTKNI 281 + + KL + + + +A KNI Sbjct: 412 LDLAHQVTQEREKLYRAEMENLKIAREHNEVLEKTVDDRTKELSEALEELSNAHEKLKNI 471 Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKTPYC--VMIMDIDHFKKVNDTWGHPVGDQVIK 339 + D LT I NR +F + A + ++I+DIDHFKKVND +GHP GD ++ Sbjct: 472 SVTDALTKIHNRYFFDQHWRSEFKRAHRHKMSIALIILDIDHFKKVNDNFGHPAGDLCLQ 531 Query: 340 TVVNIIG-KSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 V I ++ R DL+ R+GGEEF V+L D A +AE+IR +E+ I Sbjct: 532 KVAQSIRIQANRESDLVCRLGGEEFAVILPGTDEMGAYEVAEKIRHTIEKRHISWEGKTI 591 Query: 399 PQKVTISIGAVVTQENALNPNE---IYRLADNALYEAKETGRNKVVVRDV 445 K+T+SIG + ++ AD ALY+AK GRN+ V+ + Sbjct: 592 --KITVSIGISAMTPRKSDEKMRNIMFNQADQALYQAKGNGRNRTVIFES 639 >UniRef50_B3EBI3 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI3_GEOLS Length = 307 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 5/191 (2%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVM 315 +S + + V + +A D LT +FNR Y L ++ + P +M Sbjct: 115 ISAIYITVQDVTDFVIYEHKLIQMAKVDGLTGVFNRRYLDTRLQEELERSRRHGNPLSIM 174 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++DIDHFK++NDT GH GD ++ + ++ + +R D+L R GGEEF +L + E+A Sbjct: 175 MLDIDHFKEINDTHGHICGDYTLRKISELLLELVRTSDILGRYGGEEFCCILPETSFEQA 234 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 LAER R V ++ +VT+SIG + + I + AD+ALY+AK T Sbjct: 235 LVLAERCRTQVAASQFSCTDHQ--SRVTVSIGVTDLHRDD-TLDSIIKRADDALYQAKRT 291 Query: 436 GRNKVVVRDVV 446 GRN+V V Sbjct: 292 GRNRVCSSPVP 302 >UniRef50_A0YVG8 GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YVG8_9CYAN Length = 329 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 7/216 (3%) Query: 243 RYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV 302 Y +Y + V + + + A DPLT IFNR + + + Sbjct: 106 DYITKPFYAPELLARVRVHLELKYTKDELNKKSAAFEKQAITDPLTGIFNRRHLMSISEI 165 Query: 303 QSASA--QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 + A + ++++DIDHFKKVNDT+GH VGDQV+K + + +R D+ R GG Sbjct: 166 EYQKAVNYNRLFSIIMLDIDHFKKVNDTYGHIVGDQVLKRMTQEVQNLLREGDVCGRFGG 225 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPE----YAIPQKVTISIGAVVTQENAL 416 EEF ++L D + A +AER+R+ + + + K+TIS+G + Sbjct: 226 EEFAIILPGADLKIALKIAERLRQAIADFYIPIYDSNSSSNLKIKITISLGVTTYHIDDD 285 Query: 417 NPNEIYRLADNALYEAKETGRNKVV-VRDVVNFCES 451 ++++R AD+ALY+AK GRN+V + + +S Sbjct: 286 KLDKMWRRADDALYQAKAKGRNQVCSIYEPGEGLKS 321 >UniRef50_Q3SFL9 Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFL9_THIDA Length = 843 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 3/187 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVM 315 V + V+ + + A + + DPLT + NR + + + Q+ P + Sbjct: 644 VESVLVVERDIDDLKRAQEALEELTLLDPLTGVANRRFLERFVGREWMREARQRLPIAAV 703 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTER 374 ++DIDHFK ND +GH GD ++TV + ++ RP D+L R GGEEF VLL + D Sbjct: 704 MVDIDHFKDYNDHYGHAQGDACLRTVSQTLRGALHRPADILVRYGGEEFIVLLPESDLAA 763 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A+ +AER+R+ VE L +P I +VTIS+G Q + +++ AD ALY AK+ Sbjct: 764 AREIAERLRQAVEALALPHPTSPIGDRVTISLGVAAVQAHEGEFDQLLIAADAALYRAKK 823 Query: 435 TGRNKVV 441 GRN+V Sbjct: 824 KGRNRVE 830 >UniRef50_C5SA57 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SA57_CHRVI Length = 434 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 96/193 (49%), Gaps = 5/193 (2%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDI 319 ++ + + + DPLT +FNR YFF + P + ++DI Sbjct: 241 MEIIRDITDSKRLEEDLRQLTRLDPLTQLFNRRYFFTLAEQEYQRFLRYHHPMALCMIDI 300 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFK VND +GH VGD V+ V + ++R D+LAR GGEEF +LL + D + A A Sbjct: 301 DHFKSVNDRYGHLVGDTVLCIVAQTLHDNLRQVDILARYGGEEFVILLPETDLQTACAST 360 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRN 438 ER+R V + P P VT+S+G + A+ + AD LY AK+ GRN Sbjct: 361 ERLRVAVAERRIETPSG--PVSVTLSLGVVAIADGPAMTLERLLDAADQMLYRAKQAGRN 418 Query: 439 KVVVRDVVNFCES 451 +V + D+ ES Sbjct: 419 RVEIWDLGRSMES 431 >UniRef50_A1TWE2 Diguanylate cyclase n=2 Tax=Acidovorax RepID=A1TWE2_ACIAC Length = 377 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 145/361 (40%), Gaps = 20/361 (5%) Query: 90 ITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKM 149 ++ + + + + + + + L + + + + Sbjct: 34 FFYALLFLALGAHFRHTGAGPAVWVVLVVQFLVYPQLAYWTARSAPRQAKAELRNMVVDN 93 Query: 150 TLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSV 209 + G P+ + ++ L I N + + L + Sbjct: 94 LFGGLWAGLLGMPV--------WITFTLFIGNCINVVAFHGYPGLLRLVAAMGCGLLGGL 145 Query: 210 NLYFNG-LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM 268 LY + L DI +++ A+ +++ + Y R +E + Sbjct: 146 VLYGDRPLHPDIDTATSLLCILALTLFLTVFAHTSYR-------RAMEQQKSNDRLREQF 198 Query: 269 CHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVN 326 I + + A RDPLT ++NR + L + A AQ P +M++DIDHFK++N Sbjct: 199 EEIRALQDQLQEQAVRDPLTGLYNRRHLDATLASEIARCGAQGLPLSLMMIDIDHFKRIN 258 Query: 327 DTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 DT GH GD +++ + ++ + +R DL R+GGEEF +LL + A+ AE +RE Sbjct: 259 DTHGHAAGDAMLQALAQLLQRHVRVRDLACRLGGEEFVLLLPETPLAVARERAEALREAF 318 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 E L + + T+S G ++A P + AD ALY AK GRN+VVV+D Sbjct: 319 EALQVRHDPEVLSA--TLSCGVAAFPQHARQPLALTASADEALYAAKMQGRNRVVVQDEP 376 Query: 447 N 447 Sbjct: 377 A 377 >UniRef50_Q2IX34 Diguanylate cyclase n=5 Tax=Rhodopseudomonas palustris RepID=Q2IX34_RHOP2 Length = 350 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 4/192 (2%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDI 319 ++ + I + +A D +T IFNR +F + A P +++DI Sbjct: 145 MLIYSDVTDIVRNAEELERLATTDGMTGIFNRRHFLTLADREWARARRYGRPLSCLMIDI 204 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFK +ND +GH VGD +I + + R D+LAR+GGEEF +LL + D +A A+A Sbjct: 205 DHFKSINDDFGHQVGDDMIVHLAKLARDCKRDCDVLARIGGEEFALLLPETDLPQALAVA 264 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 ER+R V + ++ + T+SIGA + +++ R AD ALYEAK GRN+ Sbjct: 265 ERLRGEVAASSLLMASGSV--RATVSIGAATSAATIDGISDLMRAADRALYEAKHGGRNR 322 Query: 440 VVVRDVVNFCES 451 VV + S Sbjct: 323 VVCHVSPDAVPS 334 >UniRef50_B6BNQ1 Diguanylate cyclase n=2 Tax=cellular organisms RepID=B6BNQ1_9PROT Length = 565 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 86/420 (20%), Positives = 154/420 (36%), Gaps = 28/420 (6%) Query: 27 SWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLI 86 +F + + Y +++ L ++ FI + + ++ F I Sbjct: 164 EFFRPSRITITEAYTIYAFILLGLVLLNIYNFIMT-------KERIYMYYIAYVF--SFI 214 Query: 87 YFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFS 146 F + + A LF + + L + + Sbjct: 215 LFTSMKSGSYLTLGLHGWDEGLHVVGAFVILFLLLFSGKFLKLNTYMPYMDRVFK---IY 271 Query: 147 KKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIM---IFMW 203 + L +L P + + + + + + T ++ + + IF Sbjct: 272 ASVFLVFALLISLSVPYSSLLFNIFSALFFILLLFTTITVWSRGFRCARYYFLALTIFAP 331 Query: 204 LTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTV 263 LL + L + +A + L ++ +R ++ S Sbjct: 332 TMLLMTLTFNTILDNTDITRYSFLAGAFIEIIFFTLLLT---------NRYLDTYSANKC 382 Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDH 321 + + + A D L+ + NR YF A + ++++D+D Sbjct: 383 LTMQTKELQEIKAQLTIEAKTDLLSGLHNRRYFSEMSQKSFLQAKRYEENLSIILLDLDK 442 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAER 381 FKK+NDT+GH GD VIK +I+ R DD++AR GGEEF +LL + A +AE Sbjct: 443 FKKINDTYGHQTGDIVIKVTADILKYLNREDDIVARYGGEEFIILLPHTNLYEALVIAEN 502 Query: 382 IRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAKETGRNKV 440 IR+ +E + E VT SIG N N ++ + DNA+Y+AK+ GRNKV Sbjct: 503 IRKKIESTEI-HSESDDIFHVTASIGVAQLDTINDENISKTIQRCDNAMYKAKQRGRNKV 561 >UniRef50_Q39ZK6 Response regulator receiver modulated diguanylate cyclase n=8 Tax=Geobacter RepID=Q39ZK6_GEOMG Length = 314 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 5/204 (2%) Query: 242 SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT 301 S + + + V M + + + + ++ DPLT++ NR + + Sbjct: 102 SDFVTKPFDTGELVARVRVQLKMKGLQDELKRSNEMLRTLSITDPLTHLHNRRHLMEMVD 161 Query: 302 VQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVG 359 + + P ++I+DID+FKK+NDT+GH GD+V+ + +I+ + +R DL AR G Sbjct: 162 KEFQRSSRKGAPLSLVILDIDYFKKINDTYGHQEGDRVLTILADIVRRRLRSYDLAARYG 221 Query: 360 GEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNP 418 GEEF +LL + + A ++AER+R V+ + +TIS+G + + Sbjct: 222 GEEFVLLLPETPVQEALSIAERLRLEVQEHVFE--GSLGGLVITISLGVATYPSSRVESI 279 Query: 419 NEIYRLADNALYEAKETGRNKVVV 442 + ++R AD ALY AK+ GRN+V + Sbjct: 280 DSLFRQADEALYRAKQGGRNRVEL 303 >UniRef50_C6WYA9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA9_METML Length = 548 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 3/169 (1%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 AH D LT + NR +F + + + + + +MDID FKK+ND+ GH +G Sbjct: 380 ELNQKAHIDYLTELNNRGHFMEQAEKELSRSQRYQKDMAMFMMDIDFFKKINDSHGHKIG 439 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V+K + ++ +++R D++ R+GGEEF +LL + + A +AER+R V Sbjct: 440 DIVLKKLADVCRQTLREVDIIGRIGGEEFAILLPETNRAEALEVAERLRLAVADSKVPMK 499 Query: 395 EYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + +P + T+SIG N + + AD ALY+AK++GRN+V Sbjct: 500 DG-LPVQYTVSIGVSSVASADDNIDMLLSRADQALYQAKQSGRNRVCAA 547 >UniRef50_B0CDD6 Diguanylate cyclase (GGDEF domain) n=2 Tax=Bacteria RepID=B0CDD6_ACAM1 Length = 630 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 11/228 (4%) Query: 225 TVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI--- 281 ++AF +I + + RT + + + + A K + Sbjct: 402 FLMAFNTQAGSILDRAIINADLEDKVRERTQALYDRNLQLQQEIEERHRAEAKLKQLNQQ 461 Query: 282 ----AHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + D LT+I NR F L + ++ P +++ D+DHFK+ NDT+GH GD Sbjct: 462 LQQLSRIDGLTSIHNRRSFDESLDKEWRRLRREQQPLSIILCDVDHFKQYNDTYGHQAGD 521 Query: 336 QVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 ++ V I KS+ RP D++AR GGEEF VLL + A +AE IR +E L + Sbjct: 522 TCLQEVALAIDKSVKRPADMVARYGGEEFVVLLPNTPLPGATHIAEMIRTAIEVLRIPHK 581 Query: 395 EYAIPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVV 441 + +VT+S+G N E+ AD ALY AK+ GRN+V+ Sbjct: 582 TSSASDQVTLSLGVATVIPNTQQTYTELLEAADAALYRAKQQGRNRVI 629 >UniRef50_Q1H488 Diguanylate cyclase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H488_METFK Length = 469 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 174/400 (43%), Gaps = 32/400 (8%) Query: 69 RRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIF 128 ++QF L+ A+ + + +++ + + + + ++ + + Q C I Sbjct: 71 QKQFFLLPLAGAYAIYALAAITSLLSMHGS--PDHANPMTSDTMSNWGAYWQFGFCGFII 128 Query: 129 LALVNKVSENT--KQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNEN 186 +A+ + + + + + K T+ L + G + L++ ++ ++ Sbjct: 129 IAMAFRKATESFPQLNRIILGKNTVPFMLTPLLGIIVYMLALNAGN-LFSAIMSSSPIVT 187 Query: 187 GQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD--IWNGVTVIAFCAVLYNISLLFMSRY 244 + W + W+ + + D + IA + L ++S L + Sbjct: 188 APLGWGS---------WIMAAATFVLVRAFCSDDKLVTIFLSIAALSHLCHVSHLLIDNT 238 Query: 245 SVST-WYISRTIEVVSKLTVMVIFMCHIFSALRVTK-------NIAHRDPLTNIFNRNYF 296 S WY++ + + S T++ + + + R AH+D LT I+NR YF Sbjct: 239 PFSANWYMAHLLSLFSFTTLLAVLILQLSQFTRDLADSHAYLMEKAHKDSLTGIYNRGYF 298 Query: 297 FNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDD 353 ++ A TP ++++DIDHFK ND +GH GD+ +K + + ++ RP D Sbjct: 299 DETAELEWRRAQRNGTPISLLMLDIDHFKGYNDQFGHVKGDKCLKKIAQALHANMQRPGD 358 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-- 411 +AR GGEEF VLL E A+A+++ V++L ++ +V++SIG Sbjct: 359 FVARFGGEEFVVLLPATTAEGCHAMAQKLHLAVQKLKISAGDHR---RVSVSIGHATWNG 415 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 + NE+ AD ALY AK GRN++V + + + Sbjct: 416 PYENGSINELLSQADLALYTAKRLGRNRIVRYEDLAHSLA 455 >UniRef50_B1LBA3 Diguanylate cyclase and serine/threonine protein kinase with TPR repeats n=9 Tax=Thermotogaceae RepID=B1LBA3_THESQ Length = 1203 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 98/408 (24%), Positives = 178/408 (43%), Gaps = 35/408 (8%) Query: 51 FFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQN 110 FF + +A++F + D F + +L L + +T+ ++ + + S++ +N Sbjct: 816 FFNEEIAYVFTERLAKLDPEGFEDFLLELERENVENSSNLTLALVYETFYK-FYSALGEN 874 Query: 111 DIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFG-------GPI 163 A YL + + + LI L V+ E ++ + KK + L F+ Sbjct: 875 FKAKRYLRKAIFVYNLIGLREVSVKLEVEEKTQIEEKKAPFYLLLGFIETEKEFSDMMEF 934 Query: 164 VAHILS--SHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIW 221 VA LS YE +++ I E T + + S +T + +S D+ Sbjct: 935 VAARLSEVIPYEVFSIRIIERTTKKVMEEYSTSPITPPMEKDFLEISPFRTVMSFHLDMK 994 Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + + V + + + W + T+E + ++ R+ ++ Sbjct: 995 HDMIVGVETNLECD---------EKTAWELVETLEQFGNILTTIL-------RERLYRDR 1038 Query: 282 AHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + +DPLT + +R YF L + +S K+P +++ D D FKK+ND +GH GD+ + Sbjct: 1039 SMKDPLTGVLSRWYFMERLEEEAYKSSRYKSPLSIIMCDADDFKKINDQFGHVAGDKTLG 1098 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + + +R DL+ R GGEEF + L E AK +AE++R+ V + Sbjct: 1099 WLGRKMKSVLRKSDLVGRYGGEEFIIALPGTSLEEAKIVAEKLRKAV------MEDPENT 1152 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 +T+S G +N +P E + AD ALY AK G+N VV V++ Sbjct: 1153 YHITLSFGVAEY-KNGEDPFETIKRADEALYLAKTLGKNSVVTEKVLS 1199 >UniRef50_B4U6Y8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6Y8_HYDS0 Length = 772 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 8/180 (4%) Query: 265 VIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMIMDIDHF 322 + + + + DPLT I+NR Y N+L + A P +++ DID F Sbjct: 598 FVDITKEKELSDMLLKQSTEDPLTGIYNRRYLENKLEEYVKLAKRHDRPLSLIMFDIDFF 657 Query: 323 KKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERI 382 K +ND++GH VGD+V+K + ++ ++IR D+ AR GGEEF ++ + E AK LAE++ Sbjct: 658 KHINDSFGHDVGDKVLKAIAKVVSENIRNTDIFARYGGEEFVIIAPETTKEDAKILAEKL 717 Query: 383 RENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 R + L + VT S G +++ + + AD ALYEAK+TGRNKVVV Sbjct: 718 RSLIRNLHFE-----EGINVTCSFGVASLEKHD-TKETLLKRADEALYEAKKTGRNKVVV 771 >UniRef50_A0KRY2 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=A0KRY2_SHESA Length = 581 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 87/420 (20%), Positives = 158/420 (37%), Gaps = 26/420 (6%) Query: 28 WFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIY 87 +N+ + + S + ++ + + + + + R + LI Sbjct: 176 LYNKEQSQRALLGSFTDIAVMVGMLLALIIYNLLLFMYSRQRDNLF-------YACYLIS 228 Query: 88 FVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSK 147 I + + ++ E + L IL + + + Sbjct: 229 GGIWIALSYGLVAEVFAFYGSASLYWHLTLMTMPIFLILFMMDIFETRQHYRFEHYALVF 288 Query: 148 KMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLL 207 + L ++ F I+ + S + + + L+ V+ + + Sbjct: 289 VLVLLVAEFCYGVVDIIGALRYSSSLAALMMLTTLSVTISLVIKRHPIAKYFL------- 341 Query: 208 SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIF 267 L + ++ G + +A ++S + V + + + + + Sbjct: 342 --------LGHCLFVGFSGLAVMFYKGRAEFSYLSSHGVGVGIMLEALVLALIIAYRIRL 393 Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKV 325 + I ++ K A D LT++FNR +F E A + P V+I DID FK+V Sbjct: 394 LEEIKASQEELKYQAATDSLTHLFNRRHFHKEAQRIYMQASVTQQPMAVIICDIDLFKRV 453 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 ND +GH +GDQVI + + + R D++AR GGEEF +LL D+ A AERIR Sbjct: 454 NDKYGHLMGDQVIIDIATTLKQHARKCDIVARYGGEEFIMLLHDVSLTEAHQCAERIRSA 513 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 V L+ VT+S+G +LAD+ALY AK GRN V ++ Sbjct: 514 VAELSFMAETQE-AFTVTLSLGVAAVDFVHP-LEHAIKLADDALYRAKHQGRNNVQSSEI 571 >UniRef50_B4B886 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B886_9CHRO Length = 1121 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 6/216 (2%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 + L S + + VS+ + + + + ++ + +D LT ++NR Sbjct: 910 VGLFYLSTSEPEKISEVKQQLARAVSEHISLALVNLQLRES---LESQSIKDSLTGLYNR 966 Query: 294 NYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 Y L + A ++ P ++++D+DHFK+ ND +GH GD ++ V N + ++R Sbjct: 967 RYMEESLKREINLAQRKQHPVGLIMIDVDHFKQFNDNFGHKAGDLILHEVGNFLMANVRS 1026 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D+ R GGEEF ++L + ++ AE+IR+ +++L A +T+SIG Sbjct: 1027 GDIACRYGGEEFLLILPEASLSDSQQRAEQIRKGIKQLNFQQYNSAFT-SLTVSIGVACF 1085 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 + + + AD ALY+AK GR++VVV V+ Sbjct: 1086 PAHGKQGETLIQSADMALYQAKNQGRDRVVVFSSVS 1121 >UniRef50_B1KK06 7TM domain sensor diguanylate cyclase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK06_SHEWM Length = 623 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 20/412 (4%) Query: 44 LMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERL 103 L ++ L + L F R + AF + ++ + R Sbjct: 204 LTFLVILLCTELFMGFATLLVFFISRDKMFLYYSIFAF--SIASLFASLSGVWGYFFARE 261 Query: 104 TSSVVQNDIAIYYL-FRQMSLC-ILIFLALVNKVSENTKQRNLFSKKMTLCISL-----F 156 + + + I + + + ++K+ +N + + I+L + Sbjct: 262 SYQLWMVVLQISLSQIAAIWFVRCFLNIRQISKMIDNALLVAIAVSIAGVIINLSGYPYY 321 Query: 157 FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWK-ASYVTIMIFMWLTLLSVNLYFNG 215 +A + + G + A ++ M+ L L + Sbjct: 322 PRLIIDNIAFLYILLVPIGLFAWKKDVPHAGLFTFSWAVFILGMLTASLRLRGYLIDSFW 381 Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV----IFMCHI 271 L++ I+ G + AF + L +++ ++ + + + + + Sbjct: 382 LQWLIYLGGFIEAFLLTTIMVLRLRDMQHAKLKIELTHRQHLENYANELSQQVKLQTKQL 441 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP---YCVMIMDIDHFKKVNDT 328 A + A D LT + NR F A A + P ++++DIDHFKK+NDT Sbjct: 442 LEAKEKAETEARVDILTGLTNRRAFIESAHGFLARANRQPETHLYLLMIDIDHFKKINDT 501 Query: 329 WGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 +GH GD + V N + ++IR D+++R+GGEEF L+ + D + A L+ER+R+ +E Sbjct: 502 YGHSAGDAALVAVANSLSETIRTIDVVSRLGGEEFAALMENKDPQGAINLSERLRKAIEE 561 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 L ++ I K+T SIG N + + AD ALY+AKE+GRN V Sbjct: 562 LVIEHEGQQI--KLTTSIGIAKWGPMD-NLDTLMNQADRALYQAKESGRNCV 610 >UniRef50_Q1N175 Diguanylate cyclase (GGDEF domain) n=1 Tax=Bermanella marisrubri RepID=Q1N175_9GAMM Length = 294 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 5/186 (2%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVM 315 +S L V L + + A DPLT ++NR +FF + + +T + Sbjct: 109 LSVLLARVRSALREKERLDLMEKWATTDPLTGLYNRRFFFEQAQRELERVQRNETDASFI 168 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 I+DIDHFKKVND +GH VGD V++ + + ++ R DL R GGEEF + L D DTE A Sbjct: 169 ILDIDHFKKVNDEYGHLVGDDVLEGLAKLFKETFRKVDLCCRFGGEEFVICLPDTDTEGA 228 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 +AER R+ VE L+ + + P VTIS+G EN ++ + AD+ALY+AK+ Sbjct: 229 LLVAERTRKKVEELSFNTEKG--PLHVTISLGVSSANEN-TTLEDMLKRADDALYQAKQN 285 Query: 436 GRNKVV 441 GRN+ Sbjct: 286 GRNRTE 291 >UniRef50_Q0BZW4 Response regulator PleD n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZW4_HYPNA Length = 455 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 2/192 (1%) Query: 252 SRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQK 309 + T ++ + + ++ D LT + NR Y +L Q A+ Sbjct: 260 QELAARIRTQTRRTRYIDILRQRVDRGLELSVIDQLTGLHNRRYMNGQLEQFMQRAARGN 319 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 P +M+ DIDHFK VNDT GH GD V++ + + ++RP D++ R GGEEF VL+ + Sbjct: 320 QPLSLMMTDIDHFKAVNDTHGHQAGDDVLREIGKRLRANVRPTDVVCRTGGEEFVVLMPN 379 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNAL 429 + A A AERIR+ V + ++T+S G Q +++ AD AL Sbjct: 380 TPGDLACAAAERIRKAVAAEEFPVLGGSQNLRITVSAGVSTLQGAGDTTDDLMHRADTAL 439 Query: 430 YEAKETGRNKVV 441 Y+AK GRN+V Sbjct: 440 YQAKTGGRNRVE 451 >UniRef50_Q47A94 Diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A94_DECAR Length = 638 Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 4/190 (2%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYC 313 + + + I + +A RD LT ++NR Y L + A + P Sbjct: 449 ALRETNRQLHARIEEIGRLQVALQELAVRDSLTGLYNRRYLDETLEREVSRARREGIPLS 508 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 ++++DIDHFK+VNDT+GH VGD+V++ + + + IR +D+ R GGEEF +LL ++ E Sbjct: 509 LVMLDIDHFKQVNDTYGHQVGDEVLRILASTLSADIRAEDVACRYGGEEFLILLPNMPLE 568 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAK 433 A+ R VE L+ + + I TIS+G E+ P+++ R AD ALY AK Sbjct: 569 TTMLRAQGWRSAVEALSVKHGNFQI--TFTISLGVAAYPEHGKTPDDLTRCADQALYRAK 626 Query: 434 ETGRNKVVVR 443 GRN+V V Sbjct: 627 NEGRNQVSVF 636 >UniRef50_A8V0B5 Diguanylate cyclase (GGDEF domain) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0B5_9AQUI Length = 463 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 9/200 (4%) Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ-- 303 + ++Y + T+ + + + + L + ++ D LT ++N+ F L + Sbjct: 270 LKSFYTNITLSFLLAVILGFSVYIFLKD-LEKFRYLSETDRLTGLYNKGKFNEVLQREIQ 328 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 A K P ++I DIDHFKK+NDT+GH VGD+V+K + +I K+IR D AR GGEEF Sbjct: 329 RAKRYKRPLSLIIFDIDHFKKINDTYGHKVGDEVLKALAKLIKKNIRKTDFAARWGGEEF 388 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYR 423 +L + + E AK LAE++R+ VE KVTIS+G + + P + Sbjct: 389 VILAPETNVEGAKKLAEKLRQAVETYKFPT-----VGKVTISLGVAQLEPDEK-PEDFIV 442 Query: 424 LADNALYEAKETGRNKVVVR 443 AD ALY+AKE GRN+V + Sbjct: 443 RADMALYKAKEGGRNRVEIA 462 >UniRef50_C1A5L7 Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5L7_GEMAT Length = 491 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 99/196 (50%), Gaps = 3/196 (1%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQSASA 307 + I + + + + +A DPLT + NR ++ A Sbjct: 296 FAQAVITAAVAVIQRAQMVESTMADNARLEQLAQTDPLTQLLNRRALTERITAEMERALR 355 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 + ++++D+DHFKKVNDT+GH VGD V++ V ++G +IR D+ AR GGEEF VLL Sbjct: 356 YDSTLALLMIDLDHFKKVNDTYGHLVGDDVLRDVGQLLGHTIRGSDITARYGGEEFLVLL 415 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLAD 426 + D A A AERIR +E A P K+T SIG V N +++ AD Sbjct: 416 PETDDAGAVAFAERIRVAMEEHPFARDSMAEPLKLTASIGVAVFPAARIENVEDLFARAD 475 Query: 427 NALYEAKETGRNKVVV 442 ALY AK GRN+V + Sbjct: 476 AALYRAKAEGRNRVRM 491 >UniRef50_C8QXT9 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXT9_9DELT Length = 337 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 4/224 (1%) Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIF 291 +L + +F+ ++ E+ K+ ++ + A ++ D LT + Sbjct: 114 ILRSKVEIFLQLDRQQRLLAQKSAELDRKVRELLGVKSQLEEANARLNELSLTDALTGLA 173 Query: 292 NRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR F + + + P +++ DID FK+ ND +GH VGD+ + + +I + Sbjct: 174 NRRCFQETIHTEWRRAMRNRHPLTLVLGDIDSFKQFNDNFGHLVGDECLVRIAAVIRSPL 233 Query: 350 -RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 RP DL AR GGEEF +LL + D E + LAE +R+ VE+++ ++PE ++T+S G Sbjct: 234 MRPSDLAARFGGEEFVILLPETDLEGGRHLAETVRQEVEKMSVEHPESGTRLQLTMSFGV 293 Query: 409 VV-TQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 + + ++ AD ALY AKE GRN+V V+ F +S Sbjct: 294 SSVVPQPEFSEQDLICAADKALYVAKEGGRNRVQVQGPRAFVKS 337 >UniRef50_Q47V47 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V47_COLP3 Length = 1034 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 11/250 (4%) Query: 206 LLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRY-------SVSTWYISRTIEVV 258 +LS+NLY + + W ++ A +L ++ + ++ +V Sbjct: 785 ILSINLYVSPPPWKTWWAYSLYALLTLLVVFIFIYFRTRFQQTEIARQKQFVLALEEQVE 844 Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMI 316 K + + +A + + + ++D LT ++NR YF +LT + Q+ +++ Sbjct: 845 EKTASLNAKASDLIAANKQLEVLTYQDGLTGLYNRRYFDKQLTTEINRHYRQQQSLSLIL 904 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERA 375 DIDHFK ND +GH GD +K V IG ++ R D R GGEEF ++L + E + Sbjct: 905 CDIDHFKLFNDLYGHQQGDNCLKRVAECIGTNVARMTDANCRYGGEEFAIILPNTSVEHS 964 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE-NALNPNEIYRLADNALYEAKE 434 +AER+ +E + + + VT++IG V + + I AD ALY K+ Sbjct: 965 TLVAERLCFAIENMKILHEKSKTSNFVTLTIGVVTIPPKQKTSVDAIILSADKALYMGKK 1024 Query: 435 TGRNKVVVRD 444 GRNKVV D Sbjct: 1025 NGRNKVVRAD 1034 >UniRef50_C7QLL5 Diguanylate cyclase n=2 Tax=Cyanothece RepID=C7QLL5_CYAP0 Length = 494 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 9/219 (4%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 I L + T V++ + + + K RD LT ++NR Sbjct: 280 MGIFHLGSTIPGKLTEVKQLLATNVTRHISLALANIKLCET---LKQQNIRDALTGLYNR 336 Query: 294 NYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 Y L ++ A ++ ++++D+DHFK VNDT+GH GDQV+K + + + IR Sbjct: 337 RYLEESLKKELERAKRKERSLGIIMIDVDHFKNVNDTFGHDKGDQVLKKLGGFLQRHIRG 396 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D+ R GGEE ++L + E + AE++R+ V+ L D ++ +TIS+G Sbjct: 397 SDIACRYGGEELTLILPEASLENTRQRAEQLRQAVKNLDLDLCDH----TLTISVGIACF 452 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCE 450 E+ + + + AD ALY+AK+ GR++V+ +++ + Sbjct: 453 PEHGYSGKALLKTADQALYQAKQQGRDRVICPPILDIED 491 >UniRef50_B0C0K6 Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=B0C0K6_ACAM1 Length = 449 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 3/187 (1%) Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFK 323 + + + + +A D LT ++NR F L ++ + + P ++++DIDHFK Sbjct: 250 LMANQLEQSQQDLYRLATLDGLTEVYNRREFNRWLLVEIERSQRGEHPVSLIMVDIDHFK 309 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 ++NDT+GH GD + V ++ + +RP D++ R GGEEFGV+L + + +AERIR Sbjct: 310 RLNDTYGHQAGDLALCEVAQLLQREVRPGDIVCRYGGEEFGVILPKATSADSWVIAERIR 369 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 + + P +T S+G ++A + + AD ALY AK GRN+V Sbjct: 370 LAIAEKSVVLPSQQ-HIDMTASLGVATYPDHADCKERLVKQADQALYTAKYQGRNRVHSA 428 Query: 444 DVVNFCE 450 +V Sbjct: 429 EVNECNH 435 >UniRef50_Q47W79 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W79_COLP3 Length = 334 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 4/187 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCV 314 ++ +T + + L I+ D LT ++NR ++ + L + A + Sbjct: 143 LIEDVTDACHYQMQLQKTLAEIAQISRIDGLTQVYNRRHWQDSLEQEYAKARRHDKKLSL 202 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++D+DHFK +ND +GH GD V+ V +I +R +D R GGEEF ++L + D+ Sbjct: 203 IMLDLDHFKLLNDNYGHQGGDMVLIEVSALISTLLRVEDTFGRYGGEEFAIILPETDSAG 262 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A LA+RI + + I KVT+S+G N E+ AD+ALY+AK Sbjct: 263 AIELAQRICRIIATTPFTYNDQVI--KVTVSLGVAQLSSKESNYEELITQADSALYQAKS 320 Query: 435 TGRNKVV 441 GRN+V Sbjct: 321 QGRNQVC 327 >UniRef50_B4SMP5 Diguanylate cyclase n=3 Tax=Stenotrophomonas RepID=B4SMP5_STRM5 Length = 479 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 156/419 (37%), Gaps = 23/419 (5%) Query: 43 YLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEER 102 L + LF I +A QLY I D + LS L +T + R Sbjct: 58 LLGFAVGLFSIALLA----QLYRIADGGGQAQMPLSSLILYVFYRIPLTYVAASPGGGNR 113 Query: 103 LTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGP 162 +V + IA+ +L + L+ L + + + + + F+ Sbjct: 114 YVPAVDLSIIAVLWLLYYVHTRALVHLDAALWMQGLNAMSTVQNGLVFCFALIRFLAEDN 173 Query: 163 I-------VAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNG 215 + Y +I + W ++ + + + Sbjct: 174 ADRRDFFRTLTTYALGYFLLAFYINHYQPQVPDGGWGDLLISGLFVLLAVMAGSPWRPPA 233 Query: 216 LR----YDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHI 271 + V +L + L +SR + + ++ V+ I Sbjct: 234 VAVSRNLRRVVDAGVPLMLPLLLMMVALLVSRLHPTLAIVGFIGAMLGYALRSVLTQVEI 293 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTW 329 + +A RDPLT + NR F L + A Q V+++DIDHFK++NDT+ Sbjct: 294 QRQRDELEALARRDPLTGLGNRRNFDESLGSAHRRARRQGLGLAVLMIDIDHFKRLNDTY 353 Query: 330 GHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 GHP GD+ ++ V I+ + R DDLLAR GGEEF L D A +L ER+R VE Sbjct: 354 GHPEGDRRLRAVAGILDGCLQRGDDLLARYGGEEFIAALPSPDITHALSLGERLRAAVET 413 Query: 389 LTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 E VTISIG +P ++ AD ALY AK GRN+V Sbjct: 414 AGLPAAEAV----VTISIGVAWQAARENGDPRDLVDRADQALYRAKHAGRNRVHGAPAA 468 >UniRef50_C6C0X5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0X5_DESAD Length = 779 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 4/184 (2%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMD 318 + + A + +A D LT + NR +F ++ +++MD Sbjct: 588 VVGTFRDVTERKEAEDKLRKLATTDSLTGLSNRRFFMESAEDALERTRRYGRDLSLLMMD 647 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 ID+FK VND +GH GD V+K + K +R D+ R+GGEEF +LL D + A + Sbjct: 648 IDYFKTVNDMYGHDAGDDVLKGLSKTGLKILRNIDVFGRIGGEEFSILLPDTGLDGATLV 707 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 AER+R +E + ++ +T+SIG E+ ++ + AD LY AKE GRN Sbjct: 708 AERLRAEIETTKMNTRSGSL--NITVSIGVATYSEHTKTLEQLLKAADIGLYAAKEAGRN 765 Query: 439 KVVV 442 +V V Sbjct: 766 QVKV 769 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 12/220 (5%) Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTV-------MVIFMCHIFSALRVTKNIAHRDPLTN 289 LL + I ++S++ + + SA K ++ D LT Sbjct: 1044 GLLIAHDCRKPRKWQDHEITLLSQIAIGAAIAIHQGELYQQLESANLELKKLSCLDGLTQ 1103 Query: 290 IFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGK 347 + NR+ F L + + +++ D+DHFK NDT+GH GDQ ++ V +I Sbjct: 1104 VANRHRFDMYLDQEWRRLMRSQQFLSLILCDVDHFKGYNDTYGHLAGDQCLQQVAQVIKN 1163 Query: 348 SI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI 406 ++ RP DL+AR GGEEF ++L D A +AE+IR+ V+ LT +P + Q VT+S Sbjct: 1164 AVGRPADLVARYGGEEFAIILPDTPLRGALYVAEQIRQQVQYLTIPHP-QSTHQWVTLSS 1222 Query: 407 GAVVT-QENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 G AL+P + AD ALY+AK GRN+VV Sbjct: 1223 GVASFIPSAALSPKALINAADEALYQAKANGRNQVVFSPS 1262 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 118/296 (39%), Gaps = 25/296 (8%) Query: 169 SSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIA 228 S+ + L + + +I F+++ L S + + L Sbjct: 292 STRPFTCTLAQLSADPQYHLLSKAFGNQSIQSFLFIPLRSRSQWVGCLTLFRQEQEWETL 351 Query: 229 FCAVLYNISLLFMSRYSVSTW---------YISRTIEVVSKLTVMVIFMCHIFSALRVTK 279 + R S S W + + +++ L + + + R+ + Sbjct: 352 WAGQQKLDQHNSTPRQSFSPWCEIQRGVREWSTDELKLAEVLGLHLYMIVIQQRLTRLIR 411 Query: 280 NIAHRDPLTNIFNRNYFFNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQV 337 + A D +T + N F + L++ A Q V+I+D++ FK++ND+ GH VGD + Sbjct: 412 HQASYDVITQLPNGIIFNHRLSLALVDAVNQGNMLGVVILDLNQFKRINDSLGHGVGDFL 471 Query: 338 IKTVVNIIGKSIRPDD-------LLARVGGEEFGVLLTDID-TERAKALAERIRENVERL 389 + V + + ++ D LLAR G F +LL+ + ++ + + +++ + + Sbjct: 472 LTKVRDRLQNAL---DTYSIFNPLLARWHGARFIILLSKLSYSDESVMVCQKLLNDFQE- 527 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 + + S+G + + + + A++A+YEAK+ G+N + Sbjct: 528 --PFYVQSQAIYLGASLGIALAPYDGDTAEILLKNAESAMYEAKKQGKNTYQIYRP 581 >UniRef50_Q4USH9 Sensor histidine kinase n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4USH9_XANC8 Length = 578 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 6/233 (2%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + A + LF+S + E ++ + + + + + Sbjct: 342 ITTACLPMSAQGTQLGFLFLSAPGPAPMPRLEIAEAAAEQLSLALSNLRLRES---LRRQ 398 Query: 282 AHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RD LT ++NR Y L+ + A + P V+++D+DHFK+ ND GH GD ++ Sbjct: 399 SIRDALTGLYNRRYLEEALSHELARCARRDLPLSVLMLDVDHFKQFNDGQGHAGGDLLLA 458 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V ++ +R +D+ R GGEEF V+L + D E A +AE+IR ++ L + + A+P Sbjct: 459 AVGELLLTRLRAEDVACRYGGEEFTVILPETDGEEAMRVAEQIRGHIAALAVSDGQRALP 518 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 +VT SIG + + + + AD ALY AK GRN+V V P Sbjct: 519 -RVTASIGVASFPADGELGSALIQKADAALYVAKRQGRNRVERHGAVAVNAEP 570 >UniRef50_Q2W1M0 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=3 Tax=Magnetospirillum RepID=Q2W1M0_MAGSA Length = 477 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 2/181 (1%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDI 319 +V + +++A D LT NR FF + AS V+++DI Sbjct: 295 IGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDI 354 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFK+VND GH VGD+ +K I ++R D R+GGEEF +L + A +A Sbjct: 355 DHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVA 414 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 ER+R+ VE + + P ++T S+G Q + +++ AD ALY AK GRN+ Sbjct: 415 ERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNR 474 Query: 440 V 440 V Sbjct: 475 V 475 >UniRef50_D2UB95 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UB95_XANAL Length = 595 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 6/210 (2%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + ++ +S +++ +EVV++ M + H+ + + RDPLT ++NR Y Sbjct: 375 LGMIHLSSPNLAVLERLNLVEVVAEQLAMALHNLHLRH---RLRTQSIRDPLTGLYNRRY 431 Query: 296 FFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 L + + + P +M++D+DHFK +ND +GH GD ++ ++G +RP+D Sbjct: 432 LEESLLRELSRCARRDLPLALMMLDLDHFKALNDRFGHAGGDALLAAFGQLLGGLVRPED 491 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 + R GGEEF V+L + A+ AE+IR VE++ + +P +T+SIG E Sbjct: 492 IACRYGGEEFTVILPGAAADVAQRRAEQIRAAVEQMQVQHHGQMLP-SITVSIGVAAYPE 550 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVR 443 + E+ R AD ALY K +GRN+V Sbjct: 551 HGSTGEELLRCADAALYCGKRSGRNRVASA 580 >UniRef50_C7LSD5 Response regulator receiver modulated diguanylate cyclase n=5 Tax=Proteobacteria RepID=C7LSD5_DESBD Length = 341 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 5/226 (2%) Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIF 291 +LY +F+ + +T E+ +++ + + + R + ++ D LT I Sbjct: 114 MLYCKVRIFLEIHRQRQALQCKTRELDARIAELNLLQAELEEKNRQLQLLSSLDGLTGIP 173 Query: 292 NRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 NR F L+++ + +KTP ++I+D+DHFK ND +GH GD ++ V + + Sbjct: 174 NRRQFDEMLSLEWSRMAREKTPLSLIILDVDHFKLFNDRYGHLAGDSCLRRVALALATML 233 Query: 350 R-PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 R P D++AR GGEEF +L E A+ +AE +R+ V L ++ + + +T+S+G Sbjct: 234 RRPADMVARYGGEEFAAILPGTSLEGAQVVAESMRQTVTELAIEHLDSPVRGVLTVSLGV 293 Query: 409 VVT-QENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF-CESP 452 P ++ + AD LY+AK+ GR++ V D V C SP Sbjct: 294 SSVIPIPGCIPADLIQAADQGLYQAKQEGRDRWVRADCVPLSCRSP 339 >UniRef50_D0SXM5 Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0SXM5_ACILW Length = 440 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 86/376 (22%), Positives = 159/376 (42%), Gaps = 38/376 (10%) Query: 79 LAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSEN 138 LA ++ L+YF ++II + L R + + +F Sbjct: 75 LAQIAFLLYFFADILIIPDMFFISG-------------LMRVVLVLGTMFCCYYLFKKHK 121 Query: 139 TKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTI 198 Q + + + + ++ ++A +S H +Y Y + Sbjct: 122 NIQ--ILDRILPIGTTVAAAAWIGLLALSISPHVATY------------------IYASA 161 Query: 199 MIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVST-WYISRTIEV 257 + + L + + I + ++ + + S F+ S W+ S I Sbjct: 162 IFILIANLCVQTQFKVAVYCSILIALFIMLGVSQFMSASQAFIFSVVFSPLWFFSIYINW 221 Query: 258 VSKLTVMVIFMCHIFSA--LRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS-AQKTPYCV 314 + L V F+ + + KN+AH D LT ++NR +F + + C+ Sbjct: 222 NNILNVRRSFLRSLLDEWNYQTLKNLAHTDDLTQLYNRRHFVDMAERSIHQWPKHASSCL 281 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++ D+DHFK +ND++GH VGD+V++ + + K +R D+LAR GGEEF LL D + Sbjct: 282 LMFDVDHFKNINDSYGHDVGDRVLQLIAEVTRKEMRHSDVLARFGGEEFIALLEDTQLQD 341 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 + +AERIR +++ + TISIG + + ++ + AD ALY+AK+ Sbjct: 342 SLVIAERIRCAIQKQYIYVEPNHT-IRFTISIGVAELESHTQPLEDLIKQADIALYQAKK 400 Query: 435 TGRNKVVVRDVVNFCE 450 +GRN++ V + Sbjct: 401 SGRNRIEVYHPDMLNK 416 >UniRef50_C6N492 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N492_9GAMM Length = 509 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 6/207 (2%) Query: 247 STWYISRTIEVVSKLTVMVIFMCHIFSALRV---TKNIAHRDPLTNIFNRNYFFNELTVQ 303 +W I+ ++ ++ I +++ + +++ D LT I NR F + LT + Sbjct: 303 QSWNIAPVLDNHGEIQHFAAVGEDITEKMKLQSLLQEMSYMDGLTGIANRRRFDDFLTHE 362 Query: 304 SAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG-KSIRPDDLLARVGG 360 P +++MDID FK+ ND+ GH GD +K VV+ + + +R DLLAR GG Sbjct: 363 WYRAARYAKPLAIIMMDIDFFKRYNDSLGHLAGDDALKRVVHALKSRVLRRTDLLARYGG 422 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEF +L D + A AE +R+ V L +P+ I VTIS+G P+ Sbjct: 423 EEFICILPDTNVIDATLFAETLRQAVCALQLPHPDSNISSFVTISVGVACCTPREGEPSN 482 Query: 421 IYRLADNALYEAKETGRNKVVVRDVVN 447 + LAD ALY AK GRN+V V D Sbjct: 483 LLGLADEALYRAKTLGRNRVEVIDSRG 509 >UniRef50_C0QLJ7 Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QLJ7_DESAH Length = 576 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 5/185 (2%) Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDID 320 ++ + +A + + + D LT I NR F L + ++ +++ DID Sbjct: 385 LLKETQKRLETANQKLQTLVTSDGLTMIANRRKFDEYLDQEWQRCKRAKVWLSLLMCDID 444 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNII-GKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 +FK NDT+GH GD ++ + + +RP DL+AR GGEEF V+L+D A +A Sbjct: 445 YFKHYNDTYGHQAGDDCLRKIAQAMEKTVVRPMDLVARYGGEEFAVILSDTGLNGACHVA 504 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNP--NEIYRLADNALYEAKETGR 437 RI+E+V+ L + E ++ VT+SIG + + + + + AD ALY+AK GR Sbjct: 505 RRIQEDVKNLNIAHSESSVSTHVTLSIGITCLIPDDEDLSMDLLIKTADEALYKAKRKGR 564 Query: 438 NKVVV 442 N++ + Sbjct: 565 NRMEL 569 >UniRef50_Q21HV6 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q21HV6_SACD2 Length = 301 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 6/212 (2%) Query: 231 AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNI 290 +++ + L S Y + S L ++ + A + + +A RDPLT I Sbjct: 89 SIIRALDLGAHDFVSKPIEYPVLAARMRSALR-LIQAKRDLEKANKELERLATRDPLTGI 147 Query: 291 FNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 NR FF + ++++D DHFK +NDT+GH GD+ + T+ I + Sbjct: 148 NNRRSFFKLAEAELTKTIRHGRDIALLMLDADHFKMINDTYGHAAGDEALLTITEICQNA 207 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 R D+LAR+GGEEF + D + E A A+AERIR+ E ++ + +T+SIG Sbjct: 208 CRESDILARLGGEEFAICCPDTNLEGAYAVAERIRQQCENTVIEHNSASFG--ITLSIGI 265 Query: 409 VVT-QENALNPNEIYRLADNALYEAKETGRNK 439 + E+ + ADN LY+AKE GRN+ Sbjct: 266 TTFVPSQDKSITEMLQRADNLLYQAKEMGRNR 297 >UniRef50_C0QBK1 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBK1_DESAH Length = 430 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 8/189 (4%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCV 314 +TV + + + + A D LT IFNR F L ++ A + + Sbjct: 247 AFRDITVQKKNLQSLEGINELLEKQASTDALTGIFNRMKFNQTLTSEIKRAKRYRVALSL 306 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 ++ DIDHFK+VND++GH GD V+K + ++ ++R D+ AR GGEEF + + E Sbjct: 307 ILFDIDHFKQVNDSYGHLSGDTVLKHLARLVASNLREIDIFARWGGEEFVIQAPETSLES 366 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A LAE++R +E P+K+T+S G + + + + AD ALY AKE Sbjct: 367 AIKLAEKLRSKIENYVFPA-----PKKITVSFGVATFRSSDNDI-TLVNRADEALYRAKE 420 Query: 435 TGRNKVVVR 443 GRN+VV Sbjct: 421 GGRNQVVSH 429 >UniRef50_Q2IXE2 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Alphaproteobacteria RepID=Q2IXE2_RHOP2 Length = 457 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 2/209 (0%) Query: 237 SLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYF 296 + ++ Y + + + + H+ ++ + +A D LT + NR Y Sbjct: 247 LEIGVNDYLLRPVDKNELLARARTQIRRRRYTDHLRDNVQHSIEMAITDGLTGLHNRRYM 306 Query: 297 FNELTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDL 354 + L + A ++ P +MI+DID FK +NDT+GH GD V++ I KSIR DL Sbjct: 307 ESHLATLAEQAGSRGKPLALMILDIDFFKAINDTYGHDAGDDVLREFAVRIKKSIRGIDL 366 Query: 355 LARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN 414 R GGEEF +++ + D + A+ +AER+R + + VTISIG + Sbjct: 367 ACRYGGEEFVIVMPETDLQVAQMVAERLRRAIAGEPFAIEKGTKRIAVTISIGLSTLERK 426 Query: 415 ALNPNEIYRLADNALYEAKETGRNKVVVR 443 ++ + AD ALY AK GRN+VV Sbjct: 427 GEAVRDLLKRADTALYRAKHDGRNRVVAA 455 >UniRef50_C8R031 Diguanylate cyclase with GAF sensor n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R031_9DELT Length = 493 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 3/236 (1%) Query: 208 SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIF 267 S L++ GL I + ++V + +L + + + + + E + + Sbjct: 125 SRFLHYRGLLQGIGSFLSVPLLGSDGQVFGVLNIHK-AKRHGFREKDKEFFCAVAHNLAV 183 Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKV 325 + A D LT I+NR +F + Q+ ++ +DIDHFK V Sbjct: 184 ALERARLFENVRKEAMHDGLTGIYNRRFFLECAERELHKCQRGSNSLSLLFIDIDHFKDV 243 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 ND +GH GDQV++ + I+ IR D+ AR GGEEF VLL D + E A LAE++R Sbjct: 244 NDNFGHVFGDQVLRQLAKILQCGIRQSDIPARYGGEEFVVLLPDTNGEAACCLAEKLRSK 303 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 V P + P+ + +++G E+ ++ R+AD LY+ KE GRN+VV Sbjct: 304 VAEDLVATPPHEQPKTINLTVGVASYPEDGKTVIDLLRVADRRLYKGKEEGRNRVV 359 >UniRef50_B9ZP06 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP06_9GAMM Length = 483 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 3/236 (1%) Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 R + + +I + +L + I + + M+ Sbjct: 248 FRREQIRSLLLIPLVSDQNAFGMLGFDAVEAPHRWTDDQITALRLVADMIAGTLARKQVE 307 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + A D LT + NR F ++L + A+ ++ ++++DIDHFK ND +GH GD Sbjct: 308 QELARQARVDGLTGLANRREFDHQLERECAARRERSLSLLMIDIDHFKPYNDAFGHQAGD 367 Query: 336 QVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 ++ V ++I + RP D+ AR GGEEF +L D + E +AERIRE V L P Sbjct: 368 DCLRAVADVIRSILNRPADVGARYGGEEFACVLADTNPEGGLRVAERIREAVYGLDLKQP 427 Query: 395 EYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFC 449 + +VTISIG + P + R AD ALY AK GRN+V + Sbjct: 428 DTDEG-RVTISIGVCSVHTRWPVEPRALLRQADEALYRAKRAGRNRVEALTLPEAS 482 >UniRef50_A1WM32 Diguanylate cyclase n=2 Tax=Burkholderiales RepID=A1WM32_VEREI Length = 612 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 99/460 (21%), Positives = 168/460 (36%), Gaps = 34/460 (7%) Query: 9 SSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYD 68 S L G + + W Q + + Y + + + ++ + Sbjct: 155 HSYYLRLASAGAFMTPIELWSRQAFHDNDRLWAAYYGMFYGILC---IMVLYNGCIWAST 211 Query: 69 RRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIF 128 R + + L+ F Q E S I F L +L Sbjct: 212 RDRSYFVYCLYLAVFFLMNFSYNGFAFQYFWPESPRWSNWSQTHWI---FAFQGLAVLFT 268 Query: 129 LALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQ 188 + + + + + + + + + + + A L G Sbjct: 269 MNFLESKTRLPRMHRVLQAFLVVLVGSWIAVTVSGDIVAYHAVPIYFIFGCAPLILAAGF 328 Query: 189 VVWKASYVTIMIFMWLTLLSVNL-YFNGLRYDIWNGVTVIAFCAVLYNIS---------- 237 + + Y F+ + S+ +F L T F A + + Sbjct: 329 LALRPGYRAARFFVLAFVASITGSFFTALTVSGLIPYTFANFHASEFGLLADMVLLSQAL 388 Query: 238 -----LLFMSRYSVSTWYISRTIEVVSKL--------TVMVIFMCHIFSALRVTKNIAHR 284 LL R + I + I + L +++ + A ++ A Sbjct: 389 ADRVKLLSEQRDAAELREIEQKIATTALLKQANEDLERMVLERTSELARARDEAEHFARI 448 Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT + NR YF T++ A Q+ V+++DID FK+VND +GH GD VI+ V Sbjct: 449 DMLTGVANRRYFEEVATMEFARTQRGQQALSVILIDIDLFKQVNDRYGHAAGDAVIRAVA 508 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 + +S+R D +AR+GGEEF VLL I A A AER+RE + ++ +++ Sbjct: 509 RLAKESVRESDFVARIGGEEFSVLLPGIGQAPAFATAERLRERIAACVVEHDGHSLG--F 566 Query: 403 TISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 T S G + + + R AD ALY AK+ GRN+VVV Sbjct: 567 TASFGVSEQVADDPGFSSLLRRADQALYAAKQAGRNQVVV 606 >UniRef50_C7LRA7 Diguanylate cyclase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRA7_DESBD Length = 495 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 6/225 (2%) Query: 224 VTVIAFCAVLYNISLLFMSRYSV--STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 ++AF + + L +++ I + V T++V + R Sbjct: 268 YPLLAFASFPREMVLEPWKNHAMVYGGASIVLVLVVAGLSTLLVRGQIRLNRQSRELALA 327 Query: 282 AHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A D LT NR F + + A +++D+DHFK VNDT+GH GD V+ Sbjct: 328 ASTDMLTGALNRRAFMESASREFARVCRYGGHLSCIMIDLDHFKNVNDTYGHAAGDLVLS 387 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + + I +R D+ R GGEEF +LL D A +AE +R + L + +P Sbjct: 388 SSAHYIASRLREPDMFCRYGGEEFVILLPGTDRNGAATVAEELRAGLAGLDLQRGDEKLP 447 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +T S G + + LAD ALYEAKE GRN+V + Sbjct: 448 --LTASFGVAEIHAQCATLDTLLSLADQALYEAKENGRNRVCLAP 490 >UniRef50_B1J820 Diguanylate cyclase n=1 Tax=Pseudomonas putida W619 RepID=B1J820_PSEPW Length = 532 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 15/293 (5%) Query: 160 GGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD 219 G P++A + + + + + +++++ + L + Y Sbjct: 248 GVPMLAGFAPVPEAHWAV-VVQTPRDLALAPLGEMTRKVLLYILPVSIIGLLLMLWMTYR 306 Query: 220 IWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTK 279 + + +A A + + + WY+ EV + ++ + + Sbjct: 307 LTLPLRQLAHSASHLSATQTGEQLRRIDAWYV----EVAAIRRALLTGEQLLQEKFGKLR 362 Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A D LT + NR L S+ + V+ +DIDHFK+VNDT+GH GD+V+K Sbjct: 363 QQAQSDALTGLANRRAMQLALDALMQSS--RAFAVLALDIDHFKRVNDTFGHDAGDEVLK 420 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + ++ + R DDL RVGGEEF +LL D A+ +AERIR VE+ + Sbjct: 421 HLAELLRHNSRQDDLPCRVGGEEFTMLLPDTGLADARRIAERIRSAVEQADSPH-----V 475 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 K+T+SIG + + + + AD LY+AK GRN+V V ++ SP Sbjct: 476 GKLTVSIGVACRRPDTQQAGSVLKQADEQLYKAKHNGRNRVEV---LDLSPSP 525 >UniRef50_Q3A1L9 FOG: GGDEF domain containing protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1L9_PELCD Length = 367 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 8/199 (4%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVM 315 +T+ + A ++A D LT I NR F L + ++ P ++ Sbjct: 168 FRDITIRKRAEAALEQANTALSHLARVDALTQIPNRRAFDEALQAEWGRLAREEGPLSLV 227 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR-PDDLLARVGGEEFGVLLTDIDTER 374 + DID FKK ND +GH GD+V++ V + R P DL +R GGEEF +LL E Sbjct: 228 LCDIDCFKKYNDHYGHQAGDKVLRRVAEALADCARRPADLASRYGGEEFALLLPQTPLEG 287 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALYEAK 433 A ++AE+ R+ VE L +P ++ +T+S+G + P + AD ALY+AK Sbjct: 288 ALSVAEKARQAVEDLALQHPTSSVKPILTLSLGVASVIPSLHIAPTTLIESADKALYQAK 347 Query: 434 ETGRNKVVVRDVVNFCESP 452 RN+VV C SP Sbjct: 348 NADRNRVV----PAVCSSP 362 >UniRef50_Q1Q3F0 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3F0_9BACT Length = 344 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 4/190 (2%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--T 310 R E+++ V+ + A ++ D LT + NR +F L + + + Sbjct: 151 REKELLTLAQVLEKTNQELQQANEKLHQLSRTDSLTGLANRRFFDEMLHNEWKQSVRLAK 210 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTD 369 P ++++DID FK NDT+GH GD+ +K V I ++ R D++AR GGEEF LL+D Sbjct: 211 PLSLLMIDIDFFKNYNDTYGHQKGDECLKRVSMAILSALKRECDIIARYGGEEFVALLSD 270 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEIYRLADNA 428 D A +A+ ++ N+E + + + ++T+SIG A +P ++ AD A Sbjct: 271 TDESGAVMVAKAMQSNIEAMNIPHKDSNASGRITVSIGISNEVPSAASSPEKLISKADKA 330 Query: 429 LYEAKETGRN 438 LY AK GRN Sbjct: 331 LYLAKYEGRN 340 >UniRef50_A4BIU7 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BIU7_9GAMM Length = 318 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 4/191 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 + +V +T + + +A ++ D LT ++NR Y+ L+ + Sbjct: 125 VQNLAVIVYDVTDIATSKLELKAANDRLAQLSRTDGLTQLYNRAYWEEMLSNEFKRQKRH 184 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 +++ DIDHFKKVNDT+GH VGD VI+ V + + R D+ R GGEEF +LL Sbjct: 185 AHDLSLIMFDIDHFKKVNDTYGHQVGDDVIRAVAEEVRHNSRNTDIAGRYGGEEFALLLI 244 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D D E A AER+R+ +E PE + +VT+S+G +E+ + N AD A Sbjct: 245 DSDAENALLFAERLRKAIENRRVSTPEGEL--QVTVSLGVAPWKESFHHYNAWIEAADKA 302 Query: 429 LYEAKETGRNK 439 LY +K+ GRN+ Sbjct: 303 LYTSKDEGRNR 313 >UniRef50_Q2VZ27 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Magnetospirillum RepID=Q2VZ27_MAGSA Length = 355 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 3/189 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE--LTVQSASAQKTPYCVM 315 + L + + C + + +A RD LT NR +F + L + A + ++ Sbjct: 168 IEDLALSLGAFCDTSRHMAELEELASRDSLTQTANRRHFEHLAGLELDHARRMGRSFALL 227 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 +DIDHFK++NDTWGH GD+ +K N S+R D+L R+GGEEF V L + + A Sbjct: 228 ALDIDHFKRINDTWGHAAGDEALKAFANACRLSLREYDILGRIGGEEFAVALPNTGPDGA 287 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 + +AER+R VE L + + +T+SIG +E L + AD ALY AK + Sbjct: 288 RVIAERLRAAVEELVVRPAKGEL-FDLTVSIGIAQLREGDLTVETMLERADQALYRAKNS 346 Query: 436 GRNKVVVRD 444 GRN+V+ + Sbjct: 347 GRNRVMAEE 355 >UniRef50_Q1D095 Response regulator/GGDEF domain protein n=3 Tax=Cystobacterineae RepID=Q1D095_MYXXD Length = 347 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 7/244 (2%) Query: 204 LTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIE-VVSKLT 262 + V L G+ + A ++ +L +S S + + +V K Sbjct: 99 FGFIPVILMTARQAAGKVEGLELGADDYLVKPFDMLELSARVKSMLRLKALQDALVEKNR 158 Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDID 320 + + + + D LT + NR F L + A P ++++DID Sbjct: 159 ELDRANKELAARREELLALTRTDALTGLSNRRAFEERLNDEFARSRRYGAPLSLVMLDID 218 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 HFK++ND++GHP GD V+K V +R DLLAR GGEEF LL + A + E Sbjct: 219 HFKRINDSFGHPFGDHVLKAVAQTARARLREVDLLARYGGEEFIALLPETGPADALRVCE 278 Query: 381 RIRENVERLTGDNPEYA---IPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETG 436 R+R+ + L ++ + ++T S+G + + R AD +LY AK G Sbjct: 279 RVRDAIAALELEHVGGSGKPQCVRLTASLGVATVPSGDLPSAEALLRAADASLYAAKGAG 338 Query: 437 RNKV 440 RN+V Sbjct: 339 RNRV 342 >UniRef50_C6BVV0 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVV0_DESAD Length = 838 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 3/178 (1%) Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKV 325 + + +A D +T + NR YF + ++ + P +++ D+D FK V Sbjct: 657 VTESREKENQLRRMATTDDMTKLNNRRYFIELVKSEIERSIRYSRPLSLVMFDVDKFKAV 716 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 NDT+GH VGD V+K + +R D++ R+GGEEF V L + D + A LAER+R Sbjct: 717 NDTYGHDVGDMVLKAIAATAKGVLRDVDIIGRLGGEEFAVGLPETDLKGAMLLAERLRVV 776 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 +E + + P+ I T+S+G V + + + + + AD ALY AKE GRN+V Sbjct: 777 LEEASVELPDGGIVD-FTVSLGVAVLDRSITDVDVLLKHADLALYAAKENGRNRVEAY 833 >UniRef50_A8DJI0 Sensor protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJI0_9BACT Length = 750 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 2/201 (0%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKT 310 + V L + A ++ A D LT +FN YF +L + A Sbjct: 531 ELVVRVKALIAQKREFEAMLRAYHSARHRAITDGLTGLFNHAYFLEKLTREAELAGRSGR 590 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDI 370 P V+++D+D FK NDT GH G++++K + ++ + R DLLAR GGEEF VLL + Sbjct: 591 PLSVIMLDVDRFKHFNDTNGHETGNELLKDLARLMERCFRRSDLLARYGGEEFVVLLPNT 650 Query: 371 DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALY 430 +A LAER+R V E +T+S+G + +P ++ LAD ALY Sbjct: 651 PKSQAAVLAERLRRRVAEYPFVGRESQPGGCLTVSLGVAAMPTDTSDPKQLLELADRALY 710 Query: 431 EAKETGRNKVVVRDVVNFCES 451 AK+ GRN+V V + S Sbjct: 711 RAKQNGRNRVCVVESEAVGRS 731 >UniRef50_Q30QX5 Diguanylate cyclase n=2 Tax=Proteobacteria RepID=Q30QX5_SULDN Length = 564 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 169/430 (39%), Gaps = 40/430 (9%) Query: 28 WFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIY 87 F+Q + + V+I+ + + F+ + + L+ + Y Sbjct: 162 IFSQKESTKYLIYEKVDSVLISGLLLALALYNFLIFISSRYKEYLYYSLYLLSTTLWIFY 221 Query: 88 FVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSK 147 ++ Q+ + I F + IFLAL + TK++ + Sbjct: 222 AYGSMAHYFQVYGD------------IPVKFNFGMMLSPIFLALFIQTIFKTKEQYINEH 269 Query: 148 KMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLL 207 K+ I + +S L I + ++FMW+++ Sbjct: 270 KLLNSIIFVSLANFIYGLIDFNS-----ALEIMSSSLTYAL----------IVFMWISIR 314 Query: 208 SV-----NLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVS--- 259 + + + ++ +V A L ++S + S I + + Sbjct: 315 ICKKGDKLIKIFLIAHTLYLIFSVYALLYYLGIADANYISSHGTSIGLIIEAMLLSYLVS 374 Query: 260 -KLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQKTPYCVMI 316 K +M K +A D +T ++NR YF + +K +++ Sbjct: 375 YKFIIMEQEKEEEKLKQIELKLLASTDSMTKLYNRRYFTEISAKVLHLSKREKNNLSILM 434 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 +DID FK VNDT+GH GD+V+ + ++ + R D++ R GGEEF +LL + + A Sbjct: 435 IDIDRFKVVNDTYGHQFGDEVLIALSRLLVEHQRKSDIVCRYGGEEFVILLPNTSLKDAT 494 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ-ENALNPNEIYRLADNALYEAKET 435 +A++IR VE LT + P K TISIG E+ + + AD+ALY AK + Sbjct: 495 NIAQKIRILVESLTMEAPTNK-EFKFTISIGVAQIDVEHEDDIKFALKRADDALYRAKNS 553 Query: 436 GRNKVVVRDV 445 GRN+V ++ Sbjct: 554 GRNRVCAEEI 563 >UniRef50_B7K319 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Cyanothece RepID=B7K319_CYAP8 Length = 660 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 18/243 (7%) Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVI-------FM 268 R + ++ L+++ + + + + ++ + + + Sbjct: 416 FRSRGVKSIMMVKTYYQSKANGLVYLEQCNYHRQWTEEEMSLLESVAAQLGIAIAHSHLL 475 Query: 269 CHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVN 326 + A +A+ D LT + NR +F L + +K P +++ D+D+FK+ N Sbjct: 476 EQLKEANEKLAALANLDGLTQVANRRHFDEILAQRWKQCAREKQPLSLIMCDVDYFKRYN 535 Query: 327 DTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 D +GH +GD+ + V I K++ RP DL+AR GGEEF V+L + D K +A+ IRE Sbjct: 536 DFYGHQMGDECLIKVAQTIAKTVQRPGDLVARWGGEEFAVILPNTDVNGVKYIAQSIREQ 595 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPN--------EIYRLADNALYEAKETGR 437 V+ L + + I +V+IS+G A + AD ALY+AKE GR Sbjct: 596 VQSLAIIHEDSPIKNQVSISLGIATIIPPAKTLENNHESLIKALIAQADQALYQAKEQGR 655 Query: 438 NKV 440 +++ Sbjct: 656 DRI 658 >UniRef50_Q3A8D4 Putative sensory transduction system, regulatory protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A8D4_PELCD Length = 536 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 7/208 (3%) Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA 305 + W++SR V KL + + A R +++ D LT I NR F + L + Sbjct: 325 LVMWFVSRRAASVDKLVAQRTY--ELDEANRRLASLSLTDGLTGIANRRSFDDHLAQEWK 382 Query: 306 S--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEE 362 + P ++++DIDHFK ND +GH GD ++ V ++ + RP DL+AR GGEE Sbjct: 383 RALRDRHPLSLIMVDIDHFKAYNDYYGHLAGDDCLRQVARMLQSVVARPGDLVARYGGEE 442 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEI 421 F ++L D AK+L E R V + + VT+S+G + +P+++ Sbjct: 443 FALILPQTD-HGAKSLGESCRAAVAGGKIPHHASPVKPVVTVSVGVATMIPHVEDDPSQL 501 Query: 422 YRLADNALYEAKETGRNKVVVRDVVNFC 449 + AD A+Y AK GR+ VVV + Sbjct: 502 IKAADQAMYRAKLLGRDHVVVEAPASQS 529 >UniRef50_C7R6L5 Diguanylate cyclase n=4 Tax=Gammaproteobacteria RepID=C7R6L5_KANKD Length = 393 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 86/393 (21%), Positives = 163/393 (41%), Gaps = 11/393 (2%) Query: 54 DTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIA 113 + + ++ Q + ++ + + ++ +I + D Sbjct: 8 NEIHWLTGQFRDRSNESKYRDYIEKSVRFESRFALIVVAVIFGMFGITDYNLLGLTRDYY 67 Query: 114 IYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYE 173 + R + + + LA + S + ++ V P+ LS+ Sbjct: 68 LLLTMRIIVVSSCLILAFIIGRSGGYARNVWLHALPLWIVATGIVLIVPLRPESLSTQVT 127 Query: 174 SYNLHIAELTNENGQVVWKASYVTIMIFMWLTL--LSVNLYFNGLRYDIWNGVTVIAFCA 231 I ++ V + ++L++ LS + F L + ++ A Sbjct: 128 ----AIVVAIMAFYLLIPNLLTVAALASLYLSISFLSAAVAFAELSPVATVTIGLLIMVA 183 Query: 232 VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIF 291 + + L + + + E + + + H S + A D LT + Sbjct: 184 NIVGYTALLRIEF-LQRKQFALLNEEREQNRHLEKEITHRKSLEERLRTAAESDALTGVD 242 Query: 292 NRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI 349 +R +F +Q + +K P+C+ ++D+D+FK+VNDTWGH GDQ++ + + S+ Sbjct: 243 SRGHFMQRAEALLQRSRFEKAPFCLFMIDVDYFKRVNDTWGHTCGDQILSKIAEVCQHSL 302 Query: 350 RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV 409 RP+D++ R GGEEF V L + +T AKA+A+R+++NV LT D + VT IG Sbjct: 303 RPNDIIGRFGGEEFVVGLPNTNTSEAKAVADRLKDNVAALTLDGEMSELRLSVT--IGIA 360 Query: 410 VTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 V + + + ADN LY K GRN+VV+ Sbjct: 361 VADTEDDDLDVLITRADNMLYVGKREGRNRVVI 393 >UniRef50_Q2P4J7 Sensor histidine kinase n=16 Tax=Xanthomonas RepID=Q2P4J7_XANOM Length = 569 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 6/259 (2%) Query: 191 WKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWY 250 W I +L ++ + + L D + A + LF+S Sbjct: 311 WALRRGQPHIIEYLGRDALCAHIDELPSDASVTTACLPMSAQGTQLGFLFLSAAGPGPMP 370 Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 E ++ + + + + + + RD LT ++NR Y L+ + A + Sbjct: 371 RLEIAEAAAEQLSLALSNLRLRES---LRRQSIRDALTGLYNRRYLEESLSHELARCARR 427 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P V+++D+DHFK+ ND+ GH GD ++ V ++ +R +D+ R GGEEF VLL Sbjct: 428 GLPLSVLMLDVDHFKQFNDSQGHAGGDLLLAAVGELLLTRLRTEDVACRYGGEEFTVLLP 487 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + D E A +AE+IR + L + A+P KVT SIG + + + AD A Sbjct: 488 EADGEEALRVAEQIRGYIAALAVSDEARALP-KVTASIGVASFPADGEQGASLIQKADAA 546 Query: 429 LYEAKETGRNKVVVRDVVN 447 LY AK GRN+V V Sbjct: 547 LYRAKHRGRNRVERHGAVM 565 >UniRef50_Q04S93 GGDEF domain receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04S93_LEPBJ Length = 330 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 106/260 (40%), Gaps = 18/260 (6%) Query: 206 LLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 +L + L+ +T + VL Y + + + + V + Sbjct: 71 ILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARVRSALRLF 130 Query: 266 IFMCHIFSALRVTKNI--------------AHRDPLTNIFNRNYFFNELTVQSAS--AQK 309 M + + + + D LT ++NR YF+ LT + Sbjct: 131 EEMTRRKEREKELEKLTDQLQEVNSYLVAISRTDSLTGLYNRRYFYEILTTEWKRCWRTG 190 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR-PDDLLARVGGEEFGVLLT 368 ++++DIDHFK NDT+GH GDQ +K V I R D+ AR GGEEF V+L Sbjct: 191 AGIALIMLDIDHFKLYNDTYGHQGGDQCLKQVARAIRDCARRAGDVAARYGGEEFAVILP 250 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADN 427 + + A ++ I ENVE++ + VT+SIG + E+ AD Sbjct: 251 ETNESNAVVVSRNILENVEKMAIPHSASKTNSIVTVSIGMATLSPSPENSITELIERADK 310 Query: 428 ALYEAKETGRNKVVVRDVVN 447 ALY AKE GRN + + Sbjct: 311 ALYLAKEEGRNCLRFYPQGD 330 >UniRef50_C6MLA7 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. M18 RepID=C6MLA7_9DELT Length = 319 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 5/215 (2%) Query: 236 ISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNY 295 + R + +++ E++ +LT + A R K +A RD LT+++N Y Sbjct: 108 LISAVAGRAAEKARLVAQNRELLEQLT---KANEELQEANRALKEMAIRDGLTSLYNHRY 164 Query: 296 FFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDD 353 F L + + C++ D+D+FK+ NDT GHP GD+++K + II R D Sbjct: 165 FQEALAREVVRSKRYDKRCCLVFFDVDNFKQYNDTHGHPEGDRLLKGLARIIMLRSRGCD 224 Query: 354 LLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQE 413 L AR GGEEF +LL + E A +AE +R V E VT+SIG E Sbjct: 225 LAARYGGEEFVLLLPETGKEAALTVAEDMRVRVAEHPFAGRETQPLGTVTVSIGVACFPE 284 Query: 414 NALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + + + AD LY+AK +G+N+V Sbjct: 285 DGSDAATLLCCADQLLYQAKNSGKNRVAAMPSSPS 319 >UniRef50_Q21NS3 Diguanylate cyclase n=5 Tax=Alteromonadales RepID=Q21NS3_SACD2 Length = 319 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 4/195 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 + +V +T + + I +A I+ D LT + NR + + + Sbjct: 125 VEHICLIVYDVTEVAVNRLQIQAANLQLHEISRTDGLTGLLNRKTWELDAEQEYKRFKRH 184 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 + P +++ DIDHFK +ND++GHP GD+VI+ + IR D+ R GGEEF ++L+ Sbjct: 185 EHPCSLVMFDIDHFKNINDSYGHPAGDEVIRQTAAAVKSCIRDIDIAGRYGGEEFTIVLS 244 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D DTE A +AERIR ++ LT ++AI + T+S+G + N AD A Sbjct: 245 DTDTEGALVVAERIRNQIQELTVHYEDFAI--QFTVSLGVAQLTQQMTNRTAWIDCADKA 302 Query: 429 LYEAKETGRNKVVVR 443 LY+AK+ GRN VV Sbjct: 303 LYQAKKNGRNNSVVY 317 >UniRef50_A5UZW7 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5UZW7_ROSS1 Length = 797 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 72/256 (28%), Positives = 126/256 (49%), Gaps = 11/256 (4%) Query: 189 VVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVST 248 VW+A +I + + + + G V+A +L +++ + +S + Sbjct: 541 PVWEAIERQRIIIRHRVVYAHAGEIKSIPSVL--GAPVVAGDRMLGVLAVYHLHDHSHFS 598 Query: 249 WYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSAS 306 +E+V + T + I +F+ T+ +A D LT +FNR +FF ++ A Sbjct: 599 ERDGAMLEIVGRQTGIAITNAQLFT---ETQRLATTDQLTGLFNRYHFFALAPRELERAR 655 Query: 307 AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVL 366 + ++I+D+DHFK +NDT+GH GD V++ + + + + +R D+LAR GGEEF L Sbjct: 656 RYRHDVALLIIDVDHFKTINDTYGHVAGDTVLQHIADHMRRELRDADILARFGGEEFIAL 715 Query: 367 LTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN--ALNPNEIYRL 424 L + + A +A R+R +E +I + TIS+G + + + + Sbjct: 716 LPETNLTGALRVAGRLRATIEANPVPLNGQSI--RATISVGCASLHPATRDEHLDTLIQR 773 Query: 425 ADNALYEAKETGRNKV 440 AD ALY AK GRN+V Sbjct: 774 ADRALYTAKAGGRNQV 789 >UniRef50_A9A0S0 Diguanylate cyclase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0S0_DESOH Length = 374 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 3/195 (1%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASA 307 + + + + + V L+ T+ + +D LT ++NR YFF + + Sbjct: 172 FSKNDLRLFAAVAENVAIAVSNAMTLQQTRELIRKDELTGLYNRRYFFERFEREVYRSRR 231 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 +M++DIDHFK+ ND++GH GD+V+KT+ I S+R D++AR GGEEF VLL Sbjct: 232 YGRTISLMMIDIDHFKEYNDSYGHLRGDRVLKTISRIFESSLRKIDVVARYGGEEFLVLL 291 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQK-VTISIGAVVTQENALNPNEIYRLAD 426 + E A +AE++R+ VE++ + + +TI+IG ++A P LAD Sbjct: 292 PETSRENAIRVAEKLRQAVEKVDFNEDAPNLGPCALTITIGVSAIPDDANEPILALDLAD 351 Query: 427 NALYEAKETGRNKVV 441 ALY K GRN+V Sbjct: 352 KALYMGKAQGRNQVC 366 >UniRef50_C6WYA7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYA7_METML Length = 591 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 3/186 (1%) Query: 260 KLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIM 317 ++ + K A D LT + NR YF + + TP ++ Sbjct: 405 RMIGTSTDITERKQLEEELKRQARIDFLTGVSNRRYFMEQAEQEIQRTSRYDTPLSFFML 464 Query: 318 DIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKA 377 DID FK+VNDT+GH GD V+K + ++ +++R D++ RVGGEEF +LL + D +A Sbjct: 465 DIDLFKQVNDTYGHKSGDIVLKRMASVCRETLREIDIIGRVGGEEFAILLPETDKAQAAE 524 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGR 437 +AER+R + A P + T+SIG + N + + LAD ALY+AK+ GR Sbjct: 525 VAERLRSVLADEKVPTEAGA-PIQFTVSIGVASRVSSQDNIDMLLNLADEALYQAKKYGR 583 Query: 438 NKVVVR 443 N+V + Sbjct: 584 NRVYIA 589 >UniRef50_B2A6L1 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6L1_NATTJ Length = 340 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 13/221 (5%) Query: 238 LLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFF 297 L ++R + + + + + + + + +A D LT + NR F Sbjct: 120 LELLARVGSAIKLSKEKRMRIVREQELEKTLKLLEETNKKFEKLATIDELTQLANRRLFD 179 Query: 298 NEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG-KSIRPDDL 354 + + A+ ++++DID+FK ND +GH GD+ +K + + +RP D Sbjct: 180 ETMRGEWRRANRNGYNLSIILLDIDYFKNFNDAYGHQAGDECLKAIAKKLKFLMMRPGDF 239 Query: 355 LARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT--- 411 AR GGEEF V+L + D A ++AE+IR+ +E L + + + Q VT+S+G Sbjct: 240 AARYGGEEFAVILPETDLRGAHSVAEKIRQGIEELKIPHCDSKVAQYVTVSLGVASADLK 299 Query: 412 -------QENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 Q + AD ALY+AK+ GRN + + Sbjct: 300 NCQGGRDQATDDEIKILIEHADEALYKAKDNGRNTIALMQP 340 >UniRef50_B5VWD6 Diguanylate cyclase n=2 Tax=Arthrospira RepID=B5VWD6_SPIMA Length = 396 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 81/376 (21%), Positives = 164/376 (43%), Gaps = 26/376 (6%) Query: 81 FLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTK 140 FL + Y + + ++ R + + + + +F + +L + + Sbjct: 32 FLKWMAYGCFSFALGCLLLFLRFSYGINVYTLPLSNIFLALMPILLTHSIFIFLDKSINR 91 Query: 141 QRNLFSKKMTLCISLF-FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIM 199 + + + L + +F +F I+ H + L+ + + Sbjct: 92 KIHKLYLIIALSVLVFSLIFLISIMHHKWIPGIYTSALNAILYL------------IPGL 139 Query: 200 IFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVS 259 I + + + L D+ + +IA +L N L + ++S +++ + ++ Sbjct: 140 IVLREPVRRNTIIRIMLWLDLMLFIVLIARTLILLNFCLSPSTDDTISNFHMMGLLLFLT 199 Query: 260 K-----------LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ 308 + + + A + + +A D LT + NR + + L + A Q Sbjct: 200 IPCVNAQTLCFPVLDFMETYRELLVANKKLEKLATVDELTGLLNRRFLNSRLEQEIAYHQ 259 Query: 309 KT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVL 366 + P +M++DIDHFKK+ND +GH GD V++ V + K +R +DL R GGEEF VL Sbjct: 260 QMGFPLSIMLIDIDHFKKINDQFGHLAGDYVLQKVAKLTNKFLRVNDLAFRYGGEEFMVL 319 Query: 367 LTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLAD 426 L + +A +AE +R ++ +L ++P+ ++T S G ++ +++ + AD Sbjct: 320 LPRSEISQALDMAEGLRVSISQLYFNHPDIPSDFQITASFGISELTKDVRCLDDLLKQAD 379 Query: 427 NALYEAKETGRNKVVV 442 ALY+AK GRN+V + Sbjct: 380 LALYQAKSQGRNQVCM 395 >UniRef50_A1TWT4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TWT4_MARAV Length = 407 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 8/225 (3%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSK-----LTVMVIFMCHIFSALRVTKNIAHRDPLT 288 +++ + W R V+ L +++ + + +A RD LT Sbjct: 181 FSVEYAITRKDGRKIWVWERGCGVLDDDGTMVLEGIILDISDRKQLENELEALATRDSLT 240 Query: 289 NIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG 346 + NR L ++ A P ++ +D DHFK++NDTWGH GD V+ ++ +++ Sbjct: 241 GVLNRRECSRVLIEELERARRYNRPLALLWIDFDHFKEINDTWGHAAGDSVLCSISSLLE 300 Query: 347 KSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI 406 S+R D L R GGEEF ++L ++D A+ AER+R+ V ++TISI Sbjct: 301 DSVRSVDTLGRFGGEEFVLILPEMDVAEAEETAERLRQRVCNQPVALESGH-NIRLTISI 359 Query: 407 GAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCES 451 G V ++ + + AD A+Y AK+ GRN + + V + Sbjct: 360 GVAVFPDHGDTLDALCAAADKAMYRAKKQGRNCIAMAQAVQPVHN 404 >UniRef50_D1RD98 Sensor histidine kinase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD98_LEGLO Length = 721 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 5/229 (2%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 + + ++A + L + + +++ + + + Sbjct: 477 YLCIPLMAQNDIYG--LLYMEVSEEPAGAFSQNQQLLITAFSELTALAFANVRLRENLRY 534 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 + RDPLT ++NR Y + L Q K+P ++++D+DHFKK+NDT+GH GD + Sbjct: 535 QSMRDPLTGLYNRRYLEDFLLKQIHQSERTKSPISLLMLDLDHFKKINDTYGHDAGDVAL 594 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K + I+ + IR D+ AR GGEEF V + D + K AE IRE V RL + Sbjct: 595 KELGKILQEDIRVGDIAARYGGEEFIVAFYNTDEKTIKTRAESIREAVSRLQVKYGAQPV 654 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 +T+SIG V + N NE+ AD ALY AK G+N++V+ ++ Sbjct: 655 G-PITVSIGVAVYPTDGRNTNELIESADKALYFAKTNGKNRIVLYSEID 702 >UniRef50_A0L8W1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8W1_MAGSM Length = 564 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 9/192 (4%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDI 319 +++ + + + ++ D LT + NR L + ++++D+ Sbjct: 378 AALILDVTDEKRLEQQLRELSTTDGLTKLINRRRMDELLDEELKRAVRYGLNLSILLLDV 437 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 DHFKK NDT+GH GD V+ + + R D R GGEEF V+L + D + A +A Sbjct: 438 DHFKKFNDTYGHEQGDHVLIALAAEMKSYFRNIDYPCRYGGEEFFVILPNTDADGAIKVA 497 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETGRN 438 +R+RE V D +VTISIG + ++ P+ + R AD+ALY AKE GRN Sbjct: 498 DRLRERVAEKEVD------GLRVTISIGVASYPDLSITRPDAMVRAADSALYVAKEQGRN 551 Query: 439 KVVVRDVVNFCE 450 KVV Sbjct: 552 KVVYASEAKQTP 563 >UniRef50_C5T8F5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8F5_ACIDE Length = 1152 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 7/192 (3%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQ--KTPYCVMIMDIDH 321 + + + + +A D LT + NR F L + ++++D+DH Sbjct: 963 IAKDVTERRRHEQTLERLATTDALTGLANRRAFMARLEEERMRPSMGGRGGMLIMLDLDH 1022 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIG-KSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 FK+VNDTWGH GD+V+ + ++ +R DL R+GGEEF VLL D E A +AE Sbjct: 1023 FKRVNDTWGHAAGDEVLVHLARLLRGDLLRATDLAGRLGGEEFAVLLPDTTAEEALGVAE 1082 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 R+R +E+ + A +VT+S+G +AL + AD ALYEAK TGRNKV Sbjct: 1083 RLRRALEQSKIHVGDGAT-LQVTMSLGVAPITGDAL---AVLAHADIALYEAKNTGRNKV 1138 Query: 441 VVRDVVNFCESP 452 V+ P Sbjct: 1139 VLARSDEPVPLP 1150 >UniRef50_C8X5B9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B9_DESRD Length = 578 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 5/191 (2%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYC 313 E ++ + + A + +A D LT ++NR +F L ++ A + Sbjct: 390 ERITSIVGSAQDITERKRAEEHLRYLATTDELTGLYNRRHFMEILDTEIERAKRYEQSLA 449 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTE 373 ++ +DIDHFK +NDT GH VGD ++ + + R D L R+GGEEF ++ D Sbjct: 450 LISLDIDHFKTINDTHGHAVGDAALEHLAAQLLACKRQPDSLGRLGGEEFALIAPHTDRA 509 Query: 374 RAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ-ENALNPNEIYRLADNALYEA 432 A LAERIR +ER + ++ TIS+G ++ + + + AD+ALYEA Sbjct: 510 GATELAERIRSELERTPIELESTSLHP--TISLGVTALNIQDNDTIDALLKRADDALYEA 567 Query: 433 KETGRNKVVVR 443 K TGRN+ V Sbjct: 568 KRTGRNRTVTS 578 >UniRef50_C4XPG9 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XPG9_DESMR Length = 368 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 5/202 (2%) Query: 252 SRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQK 309 + +E + M + + +A DPLT + NR FF A Sbjct: 166 AALVEPDGHVVGMTQDISARKALEEELLRLAASDPLTGLANRRGFFEGAARMLGMARRCG 225 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 TP ++++DIDHFK VND +GH GD V++ V + +S+R DL RVGGEEF VL Sbjct: 226 TPLSMIMLDIDHFKAVNDAYGHDAGDAVLRAVAGRLRESLRVSDLAGRVGGEEFAVLCPG 285 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-ALNPNEIYRLADNA 428 D LAER+R +E + A+ KVT S G +++ P+ AD A Sbjct: 286 TDLAGGVELAERLRLALEDMVVTADCRAV--KVTASFGVAQCRDDRDAAPSACLTRADRA 343 Query: 429 LYEAKETGRNKVVVRDVVNFCE 450 LY AK GRN+V + + Sbjct: 344 LYAAKRGGRNRVCLESDGSLGP 365 >UniRef50_B3QVY6 Diguanylate cyclase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QVY6_CHLT3 Length = 440 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 2/288 (0%) Query: 163 IVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWN 222 +V + + + I +L + ++ A + + L+++++ +Y + + Sbjct: 153 LVNPLFLKIADELLVSITKLKEQQAELGMFALILGGVFIPLLSVIAIVIYRSTVTPINDI 212 Query: 223 GVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIA 282 T+ A + + + E+ + + + Sbjct: 213 NKTIKEVRADIPDTLNTMVGELDDFVKKRHHDDEISKLARTLRHLGKEVEEKTNELNQMV 272 Query: 283 HRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 D T +FN +F E ++ A P ++++D+D FK NDT GH +GDQV+ Sbjct: 273 ITDEKTKLFNFRHFKQEFLIEVARAKRFNEPLSLIMIDVDKFKHYNDTNGHMLGDQVLIK 332 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 V ++ K R D+ AR GGEEF LL D + A +AERIR ++E +N + Sbjct: 333 VSALLKKECRETDVPARFGGEEFAALLPRTDAKEAFQVAERIRSSIETSEFENQKAQPGG 392 Query: 401 KVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 +T S+G +A + + AD ALY AKE GRN+V V Sbjct: 393 NLTASLGVATFPFDAYDAEALIIAADEALYRAKENGRNRVEVYSKRGV 440 >UniRef50_C0QQU4 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Persephonella marina EX-H1 RepID=C0QQU4_PERMH Length = 359 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 22/364 (6%) Query: 98 IIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFF 157 +I + + + DI L S IL +AL + K+ ++ + F Sbjct: 1 MINTNGKNLIEETDIDKIRLIY--SFTILGTIALYTFSF-----IHFIGKEYSIALFEFI 53 Query: 158 VFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKAS-----YVTIMIFMWLTLLSVNLY 212 V G ++ IL + + +AE G ++ + W+ + + Sbjct: 54 VATGAVLNLILLKVSDGKLIRVAENFILIGMIILLTGIIIHGGIANTAIYWIYTYPLLSF 113 Query: 213 FN-GLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV-IFMCH 270 F G R ++ +T+I +L ++ L + S I + + + V+ +F Sbjct: 114 FLKGNRVGLFWNITLIVVIVILAVLNKLNIVPIPYSPDEIRQALSAYVVIMVLAYVFESA 173 Query: 271 IFSALRVTKNIAHRDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDT 328 + S+ K +A DPLT FNR F +L ++ + +++ DID+FK +NDT Sbjct: 174 LLSSYEKIKKLATTDPLTGAFNRYQLFKKLEEEIERSKRYGNHLSLIMFDIDNFKSINDT 233 Query: 329 WGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVER 388 +GH +GDQV+K ++ I IR D L R GGEEF ++ I+ E A+ +AE+IR+ V+ Sbjct: 234 YGHNIGDQVLKITIDTIKNHIRKTDTLGRFGGEEFMIICPGINDEGARNIAEKIRKLVKD 293 Query: 389 LTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + + +TIS+G + + + + AD ALY AK+ G+N+V + N Sbjct: 294 IKVEGIPE-----ITISVGVAEYFPD-ESITDFIKKADIALYSAKKKGKNRVEIYSSENV 347 Query: 449 CESP 452 C P Sbjct: 348 CLIP 351 >UniRef50_UPI0001AEC0DE GGDEF domain protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0DE Length = 329 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 4/200 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV--QSASAQ 308 + R +V +T + + K + D LT ++NR Y+ + + Sbjct: 131 VERFCMLVYDVTEQALGKRGMEHLNEELKTASRVDGLTGLYNRRYWQERFDEMHKLCVRR 190 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 + P +++DIDHFK++NDT+GH GD+VIK + +I + +R DL R GGEEF ++L Sbjct: 191 EKPSTALMLDIDHFKRINDTYGHQAGDKVIKMLAALIKRCVRETDLAGRYGGEEFAIILN 250 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 D E AK +AERIR+ +RL ++ +I T+S+G + AD A Sbjct: 251 DSSVEDAKIVAERIRQLAQRLVVEHEGESI--SFTVSLGLAQFSPDFKGAMAWLECADQA 308 Query: 429 LYEAKETGRNKVVVRDVVNF 448 LYEAKE GRN+ + Sbjct: 309 LYEAKENGRNQYRIYAAPGA 328 >UniRef50_B7K273 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Cyanobacteria RepID=B7K273_CYAP8 Length = 308 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 4/202 (1%) Query: 243 RYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV 302 Y + + + V + + A + K +A D LT I NR Sbjct: 107 DYVTKPFKVPELLARVKTHVELKQVQKQLQEACQTMKKLADTDELTGIANRRCLLEFAQR 166 Query: 303 QSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 + TP+C++++D+DHFK +ND +GHP GD+ I+ VV II +R D R GG Sbjct: 167 EFQRSLRYGTPFCLLMIDVDHFKNINDKYGHPNGDKAIQWVVEIIKLGLREVDFFGRFGG 226 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE 420 EEF V+L A +AERIRE + + + +T SIG Sbjct: 227 EEFIVVLPQTALGGALEVAERIREAIASQPLTLEQDTV--TLTASIGVATYTGEDKTVVG 284 Query: 421 IYRLADNALYEAKETGRNKVVV 442 + + AD +LY+AK GRN+V+ Sbjct: 285 MIQRADKSLYQAKAKGRNQVIA 306 >UniRef50_A0YS99 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Phytochrome (GAF) sensor n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS99_9CYAN Length = 628 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFS----ALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA 305 + +E ++ + I ++ A + + +A D LT + NR +F L+ + Sbjct: 425 WEVHLLEQLTTPIAVAIQQAELYEQLKIANQELEKMAMTDGLTLVANRRFFDKILSQEWN 484 Query: 306 SAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEE 362 ++ ++I DID+FK+ NDT+GH GD +K V ++ + + R DL+AR GGEE Sbjct: 485 RLRREIGTLSLIICDIDYFKRYNDTYGHLAGDSCLKKVAQVLQEEVKRSGDLVARYGGEE 544 Query: 363 FGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV-VTQENALNPNEI 421 F +LL D E A ++E I V L + + + VTIS+G E L P + Sbjct: 545 FAILLPKTDLEGAILVSEVICSKVRALQITHEKSLVAPYVTISVGVASTIPEPPLIPKTL 604 Query: 422 YRLADNALYEAKETGRNKVVVR 443 AD ALYEAK+ GRN+V V Sbjct: 605 ILRADQALYEAKKNGRNRVFVA 626 >UniRef50_B9ZRW5 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRW5_9GAMM Length = 274 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 94/200 (47%), Gaps = 8/200 (4%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 +SR +T + + A K A+ D LT + NR+YF L + A Sbjct: 79 VSRVAGTAVDITDLKQVELELQRANAELKRQAYYDRLTGVANRHYFETLLNRELARADRY 138 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 P+ +++ D+DHFK+VNDT+GH GD V++ V +I + +R D+L R GGEEF VLL Sbjct: 139 GAPFALVMFDLDHFKRVNDTFGHAAGDVVLQEVTRVIAERLRDADVLGRWGGEEFMVLLP 198 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 A +AE +R VE +VTIS+G + R D A Sbjct: 199 GTQEADAARVAETMRARVEGHDFP-----EAGRVTISLGVAAFCAGEP-RTGLLRRVDEA 252 Query: 429 LYEAKETGRNKVVVRDVVNF 448 LY AK GRN+V V Sbjct: 253 LYRAKGEGRNRVAVAASAEA 272 >UniRef50_Q67JR0 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JR0_SYMTH Length = 425 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 4/189 (2%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMI 316 + L + + K++A D LT +NR F +Q A + P +++ Sbjct: 218 AVLVCVFRDISARKRLESDLKHLATTDGLTGAYNRRSFVEVCGQELQRADRRARPTSLLL 277 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 MDIDHFK++ND +GH GD+V++ +V + +R +D++ R+GG+EF VLL E+A Sbjct: 278 MDIDHFKRLNDRFGHAAGDEVLRQIVETGRRVLRSEDVVGRIGGDEFAVLLPATTLEQAG 337 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 +AE++R ERL T+S G + + E+ + AD ALY AK G Sbjct: 338 RVAEQLRTTYERLAVPARGGT--ATFTVSFGVAEWKPHLRTVEELLQRADRALYAAKNAG 395 Query: 437 RNKVVVRDV 445 RN V + Sbjct: 396 RNCVRTEEA 404 >UniRef50_Q2SPL3 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPL3_HAHCH Length = 373 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 77/358 (21%), Positives = 151/358 (42%), Gaps = 18/358 (5%) Query: 89 VITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKK 148 + + + +S +++ A+++L +++ +L ++ + K NL ++ Sbjct: 24 FGSYFLTFAVAMAGWSSGLLELRYAVHFLIMSVAINGGFYLCFLSNWNLRRKDPNLTEEQ 83 Query: 149 MTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLS 208 M + + F V + + + L + + +++ + ++ + Sbjct: 84 MLISL-----FPPLYVMYFMDDNQARSALAMVAIIP----LLYGILGIDTKRYIRVAAAY 134 Query: 209 VNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM 268 Y L +W ++ + ++ LFM ++ + + + Sbjct: 135 FGGYLGLLGLLLWQKPRLVTPNSEFVLLTALFMVMAQMALI----GGFISKLRASLRVKN 190 Query: 269 CHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVN 326 + AL +A D LT + R +L+ + + +++ + ++DIDHFK++N Sbjct: 191 HQLNEALEKISVMASTDELTGLCTRRELMKQLSNEFSRCRRSSGALSLCLLDIDHFKRIN 250 Query: 327 DTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENV 386 D++GH GD V+K V + +R D L R GGEEF ++L + A AER+R V Sbjct: 251 DSYGHQAGDAVLKKVAQTMQSLVRSIDCLGRYGGEEFLLILPQTPLDGAFITAERLRRAV 310 Query: 387 ERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 + PE A +VTIS+GA E + D ALY AK GRN+VV + Sbjct: 311 --MDIPFPEVAPEFRVTISLGAAEL-EEGEAMETLISRVDKALYAAKGAGRNRVVSAE 365 >UniRef50_A0YZR1 Putative diguanylate cyclase (GGDEF domain) n=2 Tax=Cyanobacteria RepID=A0YZR1_9CYAN Length = 328 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 4/190 (2%) Query: 256 EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYC 313 E+ ++ + +A + + IA D LT I NR F L + ++ P Sbjct: 136 ELKKQIERSRTLTEQLETANQKLEQIAALDSLTQIANRRRFDQGLHSEWKRLSRERLPLS 195 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDT 372 +++ D+D FK NDT+GH GD ++ V I + + RP DL+AR GGEEF ++L + Sbjct: 196 LILCDVDFFKAYNDTYGHRAGDLCLQQVAQTICEKVQRPADLVARYGGEEFAIILPNTQL 255 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALYE 431 + A +AE IR ++ + ++P + VT+S+G + L+ + + AD ALYE Sbjct: 256 QGAVKVAEDIRHSLHAIEIEHPNSRVSNFVTLSLGVASLIPNHYLSEDFLIGEADRALYE 315 Query: 432 AKETGRNKVV 441 AK+ GR++VV Sbjct: 316 AKKAGRDRVV 325 >UniRef50_A0YHX9 PleD-like protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YHX9_9CYAN Length = 676 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 7/225 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNI 281 + +IA L + L F+ ++ + + ++ + + + + + Sbjct: 457 LCIPMIAQGEALGILYLSFLEVDKLN-ENQQQLGIMFARSIGLALANLQLRES---LRYQ 512 Query: 282 AHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 + RDPLT +FNR Y LT + P ++++DIDHFK+ NDT+GH GD V+K Sbjct: 513 SIRDPLTTLFNRRYMEESLTREINRVTRNTYPIGILMIDIDHFKQFNDTYGHDTGDSVLK 572 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 + + + +R D+ R GGEE ++L +++ + + AE+IRE V++L + Sbjct: 573 AIGHFLQSQVRGSDIACRYGGEELILILPEVNLKETQNRAEQIREGVKKLQLKRGSQKLN 632 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 + +T+SIG + L + + AD ALY+AKE GR++VVV D Sbjct: 633 E-ITVSIGVACFPDQGLTGEIVIQAADAALYKAKEQGRDQVVVAD 676 >UniRef50_B2HWF7 GGDEF domain protein n=12 Tax=Acinetobacter RepID=B2HWF7_ACIBC Length = 420 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 87/384 (22%), Positives = 154/384 (40%), Gaps = 15/384 (3%) Query: 61 MQLYFIY-DRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFR 119 ++ F + + + L Y + ++ + + + I Sbjct: 37 LEKKFWCLNLDRTRQNISKFLASGVLTYLIFILLALPTDYLVIGVPYITLDFIHCLLSAM 96 Query: 120 QMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 ++L +L+F K L + F+ +LS + Sbjct: 97 NIALALLLFWVF-------AKFTKLSEHFYLAACGIVFLTIIINAMLLLSVGNMALKNQS 149 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLL 239 L + + + S + + + + LL+ L F L N + A+ + Sbjct: 150 MLLLSFLYMLGFILSGIKPLHMLCVGLLAAFLVFAFLILLDVNC----DYIALGRALFGS 205 Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 + +S+S+ ISR + + I + +++ +D LT I NR F Sbjct: 206 CILGFSISSMLISRERSLFLNNQLAEINEQILRIEASELLHLSQQDALTQISNRRTFDEM 265 Query: 300 LTV--QSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 A+ +K P V+ +DID FK ND +GH +GD+VI ++ I SIR D +AR Sbjct: 266 FDFFYYRANQEKRPLAVLFIDIDFFKNYNDFYGHQMGDKVISSIAAAIKNSIRHVDFVAR 325 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQEN-AL 416 GGEEF VLL + + A ++A I + +ER + + + VTIS+G V + Sbjct: 326 YGGEEFVVLLPETPAQGAYSVAANIYKAIERQAIPHAASLVSKYVTISLGFTVYTGGLKM 385 Query: 417 NPNEIYRLADNALYEAKETGRNKV 440 + + AD ALY AK+ GRN++ Sbjct: 386 GQDRLIHAADQALYRAKQLGRNQI 409 >UniRef50_B4VVS2 GGDEF domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVS2_9CYAN Length = 314 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 4/195 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQ 308 + +E+ + + + + +A DPLT ++NR +F AS Sbjct: 122 VRTHLELKQTQKQLNRLVKEHEKLANLLRKLAITDPLTGLWNRRHFLTVAYQEFNRASRY 181 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 K ++++DIDHFK++ND +GH +GD+V+K V I S+R D R GGEEF LL Sbjct: 182 KRFMSILMIDIDHFKQINDEYGHTMGDEVLKGVAKSIVGSLREADYCGRFGGEEFVTLLP 241 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + D+ A +AER+R+ +E++T + + VT+ G Q + N I + A+ A Sbjct: 242 ETDSSGAVRVAERLRKRMEQITIGIGDKQVQMTVTV--GVASYQLDDANIEVIIQRANKA 299 Query: 429 LYEAKETGRNKVVVR 443 LY AK G N+V + Sbjct: 300 LYHAKSQGYNRVALH 314 >UniRef50_B8DLV9 Diguanylate cyclase n=4 Tax=Desulfovibrio vulgaris RepID=B8DLV9_DESVM Length = 381 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 127/299 (42%), Gaps = 16/299 (5%) Query: 159 FGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRY 218 + G H+L S L L + V + +V + IF + +L+ L L Sbjct: 77 WVGRTGRHVLPSTALVLALFTLSLYMVSHGGVEGSGFVWLFIFPPVVMLTFGLSIGIL-- 134 Query: 219 DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVV--SKLTVMVIFMCHIFSAL- 275 G ++ A+L+ F+ + I + ++ + + L Sbjct: 135 --LMGALLLGVGAILFLPGDPFLYADYSQAFRIRYMLALLCCGIFAGLAEYTRRHTQRLL 192 Query: 276 ----RVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTW 329 + A D LT + NR L + A P + I DIDHFK VND + Sbjct: 193 ILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLSIAICDIDHFKSVNDCY 252 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GH GD V+++V ++ ++R D + R GGEEF +LL + D A LAE++R VE + Sbjct: 253 GHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAARLAEKLRSLVEAM 312 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + + IP VT+S G + + R AD LY AKE GRN+V +V + Sbjct: 313 --EYSYHGIPVSVTLSFGVHTCGPEG-DIDYHIRKADQKLYLAKEQGRNRVFAGEVPDI 368 >UniRef50_B0C721 EAL domain protein n=5 Tax=Acaryochloris marina MBIC11017 RepID=B0C721_ACAM1 Length = 608 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 4/195 (2%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKT 310 + +E+ K + + A + +A D LT ++NR F + ++ Sbjct: 139 QRLELEYKNLALKALSDQLAVANLELERLAAVDSLTRVYNRRRFDEVFLTEWNRLLREEK 198 Query: 311 PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTD 369 P +++ D+DHFK NDT+GH GD ++ + I K RP D +AR GGEEF V+L + Sbjct: 199 PLSLIMCDVDHFKAYNDTYGHQAGDLCLEKIAQTIAKVAKRPADCVARYGGEEFVVVLPN 258 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNA 428 D A +AE IR V L + I ++T+S+G + A+ P+ + AD A Sbjct: 259 TDISGATHVAEAIRGAVHNLNLPHSTSPISNRITLSLGVACQVPDEAIAPSLLIEAADRA 318 Query: 429 LYEAKETGRNKVVVR 443 +Y AKE GR+++ V Sbjct: 319 MYTAKEGGRDRMQVH 333 >UniRef50_Q1JWB7 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWB7_DESAC Length = 513 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 4/217 (1%) Query: 229 FCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLT 288 A + + + + S + + E+ + I S + + + D LT Sbjct: 296 ISAQINHFNRIGESGDLSERFEDHSSRELHQLSQTANHMLDRIESLNKELQLASMTDSLT 355 Query: 289 NIFNRNYFFNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG 346 + NR F L + A T ++++DIDHFK NDT+GH GDQ +++V +I Sbjct: 356 RVGNRRQFDEHLQHEWLIARRNGTVVSLLMIDIDHFKLYNDTYGHQDGDQCLQSVAEVIS 415 Query: 347 KSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTIS 405 + R DL+AR GGEEF V+L D+ A+ +AERIR+ + L N + +T+S Sbjct: 416 NQVKREADLVARYGGEEFAVILPDVPLIGAQKVAERIRQAINDLGIPNVDALKTPWITVS 475 Query: 406 IGA-VVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IG ++ ++ + E+ R AD ALY AK+ GRN ++ Sbjct: 476 IGYESMSPQSGQDCEELIRFADQALYRAKKAGRNCII 512 >UniRef50_Q7NZV8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZV8_CHRVO Length = 383 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 4/191 (2%) Query: 252 SRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQK 309 + + ++T ++ + +A +D LT + NR F ++ + Sbjct: 186 QEELALAQRITRIIAIALQRDGHEKQLYRLATQDGLTELNNRRQFIELADREIERSRRHG 245 Query: 310 TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTD 369 + V++MD+DHFK +ND +GH VGD+VI+ + + +R DL R+GGEEF +L D Sbjct: 246 SRMSVLMMDLDHFKDINDHYGHAVGDEVIRHFSQVCREVLRASDLCGRLGGEEFAAVLPD 305 Query: 370 IDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNAL 429 + A+ +AER+R ++ T+SIG + + +E+ AD L Sbjct: 306 TGLDDARQVAERLRSLASSARLSAVSGSLGY--TVSIGVAERHADETDIDEVLGRADKQL 363 Query: 430 YEAKETGRNKV 440 Y+AK GRN+V Sbjct: 364 YQAKRDGRNRV 374 >UniRef50_B0TG17 Two component diguanylate cyclase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TG17_HELMI Length = 324 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 5/183 (2%) Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDID 320 ++ + A+R +N++ D LT + NR F L + TP +++ DID Sbjct: 134 ELLRVTAELEEAVRKLQNLSSLDGLTGLANRRRFDEYLASEWKRAIRNGTPISLILFDID 193 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALA 379 FK NDT+GH GD +K + +++ K + R DL+ R GGEEF V+L D E A A+A Sbjct: 194 WFKPYNDTYGHIQGDDCLKAIASLMPKVVRRSSDLVCRYGGEEFAVILPDTSQEGALAVA 253 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGRN 438 E IRE + ++ + + +VT+S+G + P + AD ALYEAK GRN Sbjct: 254 ESIREALSEAGIEHRQSPL-DRVTVSVGVATAYPSPSSEPVTLIGYADEALYEAKRQGRN 312 Query: 439 KVV 441 + V Sbjct: 313 RTV 315 >UniRef50_A8TM57 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM57_9PROT Length = 461 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 6/190 (3%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVM 315 + +T +++ + + + +A DPLT + NR F V+ A P V+ Sbjct: 273 LIGVTGVMVDVTESHRLRQELERLATTDPLTGLSNRRAFLMRAREEVERAVRHDRPMSVV 332 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD-DLLARVGGEEFGVLLTDIDTER 374 ++D+DHFK VND +GH +GD V++ V + ++R D+ AR GGEEF +LL + Sbjct: 333 MIDVDHFKSVNDRYGHDIGDLVLQDVAATVQGALRNSGDVAARFGGEEFVLLLPETTVSG 392 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAK 433 A+ LAERIR ER + + A+ + T S G V + + + + + AD+ALY AK Sbjct: 393 AQQLAERIRVAFERTAVETEQGAV--RFTASFGVDVFRSDMDTGIDTVLKRADDALYRAK 450 Query: 434 ETGRNKVVVR 443 E GRN+V + Sbjct: 451 EAGRNRVQLA 460 >UniRef50_Q48HP3 GGDEF domain protein n=6 Tax=Pseudomonas syringae group RepID=Q48HP3_PSE14 Length = 604 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%) Query: 264 MVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDH 321 ++ + + + IA D LT + NR F L V+ A +++ ++++D DH Sbjct: 392 LLDSQAALIQLNQHLEFIASEDKLTGLANRRRFDQFLEVEFKRARRERSLLSLILIDADH 451 Query: 322 FKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 FK+ ND +GH GD+ + + ++ + I RP D+ AR GGEE V+L D A+ +AE Sbjct: 452 FKRYNDHYGHLAGDECLVALARVVEQCIRRPGDVAARYGGEEIAVVLPGTDESSARQVAE 511 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE--IYRLADNALYEAKETGRN 438 I + + ++P VT+S+G ++ + LAD ALY AK GRN Sbjct: 512 NILQAIRDEQIEHPASPFGI-VTVSLGVATFVGTDRQLDQRSLIELADRALYAAKSQGRN 570 Query: 439 KVVVRDVVNFCESP 452 +V V + P Sbjct: 571 RVNVASEIATSTLP 584 >UniRef50_Q2W7M6 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M6_MAGSA Length = 498 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 2/222 (0%) Query: 228 AFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPL 287 V Y+++ + + + + +V+ T+ + + A DPL Sbjct: 277 LILMVGYDLAGILTEWSKRAGQLAAGFLLLVALATLGLRSYLTTVRQREELRRQADTDPL 336 Query: 288 TNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNII 345 T + NR + + + A + ++DIDHFK +NDTWGHP GD+VI+ + + Sbjct: 337 TGVPNRRHLMSVAEHELARTLRYGGALALFMVDIDHFKAINDTWGHPTGDRVIQVLAAAM 396 Query: 346 GKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTIS 405 S R D R+GGEEF +L + D E A +AER+RE VE +T + P + T+S Sbjct: 397 AASAREQDTAGRLGGEEFAAVLPETDLEGAAIMAERLREAVEAITSALDDQGQPVRFTVS 456 Query: 406 IGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 IG Q + +I AD ALY AK GRN+V + Sbjct: 457 IGVAAIQLGDGSVEDILGRADRALYAAKHGGRNRVEMAATAE 498 >UniRef50_Q0F205 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F205_9PROT Length = 592 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 84/414 (20%), Positives = 153/414 (36%), Gaps = 19/414 (4%) Query: 47 MIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIII-QQIIEERLTS 105 + F+ + + I + + +++ + +IT+ + + + +T Sbjct: 180 FVIGGFVGIGILLVLYNLLIGYSTRMPEYIWYTSYVMAAVMSLITLTGLGYRYLWPSMTW 239 Query: 106 SVVQNDIAIYYLFRQMS--LCILIFLALVNKVSENTKQRNLFSKKMTLCISLF------- 156 + + L ++ + ++ + Q + + L LF Sbjct: 240 FSDFSPLLFPLLTLLLATQFTRMFLCTRDSRFIDRVLQAVFIAGGLALLCYLFGWRDYAL 299 Query: 157 -FVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYF-N 214 VF + + L W + ++I M + F Sbjct: 300 KLVFLCAFLTIFYPL-IGLWQYRRGRLDARFYVAGWSVWSLAMLIAMLRNTAVIPSDFAT 358 Query: 215 GLRYDIWNGV-TVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFM-CHIF 272 + + V+ A+ I+ L + ++ +I + L +V+ + Sbjct: 359 SFAPALGFFIEGVLLSFALADRINRLMNEKETMELMHIEHLEQEQETLERVVLERTAALE 418 Query: 273 SALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWG 330 A+R T+++A D LT NR F + A TP V+++D+D FK +ND +G Sbjct: 419 QAMRDTEHLARTDALTGALNRRACFESGETEFDRARRYNTPLAVVMIDLDLFKSINDNYG 478 Query: 331 HPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT 390 H GD V+ VV + R D + R+GGEEF VLL + A AL ER R + +L Sbjct: 479 HATGDAVLVAVVETLRGMTRTVDTIGRIGGEEFIVLLPQTSLQDAAALTERYRGAIGQLE 538 Query: 391 GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 + + KVT S G + AD ALY AK GRN + + + Sbjct: 539 VTLDD--LAIKVTASFGVACVDVTGETLTQAIGRADAALYRAKSRGRNCIELAE 590 >UniRef50_Q5P7Y3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P7Y3_AZOSE Length = 313 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 6/207 (2%) Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 F +V++W+ ++ + + +A DPLT I NR F Sbjct: 109 FPIELTVASWFGEDRR---LSFIGIIRDITERKRLEAELRQLATTDPLTGILNRRRFTEL 165 Query: 300 LTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 T + A + P ++++DID FK++ND +GH VGD+VI+++ + +R D+L R Sbjct: 166 TTQEIHRAHRLRHPLTLIMLDIDWFKRINDAFGHTVGDRVIQSLASACASELREIDILGR 225 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN 417 +GGEEF V+L ++ + +AER+R+ VE L + I + T S+G V ++ + Sbjct: 226 LGGEEFAVVLPELGASGSLEVAERLRQKVEGLQITLNDGRI-VRFTCSLGVAVLKDTDQS 284 Query: 418 PNEIYRLADNALYEAKETGRNKVVVRD 444 P+ + ADNALY AK GRN V Sbjct: 285 PDTLLVRADNALYRAKRDGRNCVRAAS 311 >UniRef50_Q1IJ19 Diguanylate cyclase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ19_ACIBL Length = 369 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 6/261 (2%) Query: 190 VWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTW 249 W + ++ L + L V ++ V+ ++ L S Sbjct: 107 FWATRFGRPLLVTAGHNLLSDAALESLGARSALIVPLVVSNKVIGSMQLFSAEHES---- 162 Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASA 307 + ++ LT++ A D LT + R YF +L ++ A Sbjct: 163 FTREDAQLFWMLTLVAENQLTRDYENEGLIKFAFTDFLTGLKTRGYFEQQLELEIKRAER 222 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 ++TP ++++D+DHFK +NDT+GH VGDQV++ V ++ K +R D AR GGEEF ++L Sbjct: 223 KRTPIAMLMLDLDHFKTLNDTYGHHVGDQVLRDVSAVLMKDLREVDTAARYGGEEFVIVL 282 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 + +T A +A RIR VE+ +++TISIG + ++A + E+ AD Sbjct: 283 PETNTTGAMQVANRIRRGVEQAKFFAGSPRQVERLTISIGIAIYDQDAQSKRELIEAADA 342 Query: 428 ALYEAKETGRNKVVVRDVVNF 448 ALY+AK GRN+VV + Sbjct: 343 ALYQAKGQGRNQVVTHAELGV 363 >UniRef50_D1SRS2 Diguanylate cyclase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SRS2_9BURK Length = 535 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 6/228 (2%) Query: 230 CAVLYNISLLFMSRYSVSTWYISRTIEVVSKL-TVMVIFMCHIFSALRVTKNIAHRDPLT 288 AV LL ++ + Y+ RT+++ + + A +++A D LT Sbjct: 299 TAVQIAGILLLLAVIGPAGAYLIRTVKLRRDADLRLRTTHEALVEAHARMEHMAEHDGLT 358 Query: 289 NIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG 346 + NR + + A + P V++ D+D FK+ ND GHP GD+ ++ V N + Sbjct: 359 GVHNRRAYDRRIREVMAQCRRYQRPVSVVMFDVDFFKRYNDALGHPEGDECLRRVANALA 418 Query: 347 KSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTIS 405 SI RP D +AR GGEEF ++L + D A +A+ R V L +P VT+S Sbjct: 419 GSIRRPGDFIARYGGEEFAIVLPETDAPGALQVAQAARSAVIALRLPHPGSPFG-HVTVS 477 Query: 406 IGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 G + P E+ AD ALYEAK+ GR+++VV + ++P Sbjct: 478 GGVACSPGQEPETPEELLGRADTALYEAKQQGRDRIVVANGPPPGDNP 525 >UniRef50_A1U7E6 Diguanylate cyclase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E6_MARAV Length = 405 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 141/333 (42%), Gaps = 11/333 (3%) Query: 114 IYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYE 173 Y F + L + V + + S + +S V + ++ + H Sbjct: 60 FIYDFVSIVLANTAIIIGVVLIYRGLFRFRGISLRHERWLSTTLVLVLAALMYVYTFHIP 119 Query: 174 SYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVL 233 NL I + +V+ A+ + S N + ++ V+ Sbjct: 120 DVNLRI-----QAFSIVFAAACLIGATGFLRHRESHNRMAGKMLIAMFLLVSAFFIFRFF 174 Query: 234 YNISLLFMSRYSVSTWYISRTI---EVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNI 290 + + + + W + I E + L+ IA DPLT + Sbjct: 175 RSFYEVPPEDFMNAGWLSALAIVAGEFLVILSSFCTIWMASDELQDELSEIARIDPLTGL 234 Query: 291 FNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 +NR F ++ + AQ++ P+ +++ D+DHFK+VND +GH VGD+V++ N + + Sbjct: 235 YNRRAFDECCDIEFSRAQRSGAPFAIIMCDLDHFKRVNDRYGHHVGDEVLRRFANTLKEH 294 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 IR D++AR GGEEF +LL DTE+ +AE++R + + ++ S G Sbjct: 295 IRKHDVVARFGGEEFVLLLPGKDTEQGLEVAEKLRAKTADTQITIGD-DVCLTLSASFGV 353 Query: 409 VVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 + + + ADNALY AK+ GRN+VV Sbjct: 354 AHYDSSDREWSAVLHRADNALYAAKKQGRNRVV 386 >UniRef50_Q310L5 Diguanylate cyclase (GGDEF domain) n=2 Tax=Desulfovibrio RepID=Q310L5_DESDG Length = 525 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 5/192 (2%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPY 312 ++V+ + R + A D LT + NR +F L + P Sbjct: 324 VQVLHSAMRHLALAVKNALLFREMRLQADHDGLTQLHNRRHFDTRLREELDRHGRYSMPL 383 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 +M++DID+FK++ND +GH GD V++ + +++ ++IR D AR GGEEF +L D Sbjct: 384 TLMMLDIDYFKQINDRFGHQAGDAVLRELASVLRETIRTTDYCARYGGEEFVAILPHTDE 443 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNP-NEIYRLADNALYE 431 ++A+ LAER+R+N+E + I T+SIG + AL P +E+ R AD ALY Sbjct: 444 QQARVLAERLRKNIESRVFRHHGKTIQA--TVSIGLTGFKPGALTPRDELVREADAALYL 501 Query: 432 AKETGRNKVVVR 443 AK GRN V Sbjct: 502 AKANGRNVVCTF 513 >UniRef50_Q2IF81 Response regulator receiver modulated diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=Q2IF81_ANADE Length = 351 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 7/211 (3%) Query: 242 SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT 301 + + + + + + + + R + D LT + NR F L Sbjct: 131 DDFLAKPFAEAEILARCAAMLRIKTLQDQLRETQRRLREQTLTDDLTGLKNRRAFDERLQ 190 Query: 302 VQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVG 359 + A + P ++++D+DHFK VND +GHP GD V++ + S R D+ AR G Sbjct: 191 EEFRRAHRYSDPVSLIMIDLDHFKLVNDRYGHPFGDLVLRGASEQLRASTRDPDICARYG 250 Query: 360 GEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA----IPQKVTISIGAVVTQE-N 414 GEEF V+L A A+AERI + + + P + +VT S+G + Sbjct: 251 GEEFAVILPKTHLSGALAVAERIWKELSARSYPVPAGSAEPDTAIQVTASMGIAFYPSKD 310 Query: 415 ALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 +P + R AD ALY+AK+ GRN + + Sbjct: 311 IGSPEALVRYADEALYQAKKAGRNTICLYQA 341 >UniRef50_Q31K54 Diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors n=2 Tax=Synechococcus elongatus RepID=Q31K54_SYNE7 Length = 1099 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 8/228 (3%) Query: 222 NGVTVIAFCAVLYNISLLFMSRYSVSTWYISR--TIEVVSKLTVMVIFMCHIFSALRVTK 279 + + AF +L ++ M + S E +++ + I + + Sbjct: 850 FCLPLAAFGEILGHLQFEQMVTHDNSCVDSKAPPLAETIAEQLALAIANLQLRET---LR 906 Query: 280 NIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQV 337 RDPLT +FNR Y + A A+++ ++++DID+FK+ ND +GH GD V Sbjct: 907 QENLRDPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEFGHDAGDMV 966 Query: 338 IKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYA 397 +K V + +R D++ R GGEE +L+ E + A++IR+ + +L E Sbjct: 967 LKQVARALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIAQLIISYHEQT 1026 Query: 398 IPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 +P +TISIG E+ L + + + AD +LY+AK GRN VVV Sbjct: 1027 LP-SLTISIGVAAFPESGLASDTLIKSADTSLYQAKAAGRNCVVVHQP 1073 >UniRef50_Q479K2 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q479K2_DECAR Length = 721 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 4/194 (2%) Query: 254 TIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTP 311 E+ S + + I + A RD LT FNR Y L + + + P Sbjct: 527 EAELRSANDKLRKQLEEIEKLQVALREQAIRDSLTGCFNRRYLDETLERELSRSRREGYP 586 Query: 312 YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDID 371 ++I+D+DHFK++NDT+GH GDQ + + + IR +D+L R GGEEF +L+ + Sbjct: 587 LSLLILDLDHFKRINDTYGHMAGDQALIVLAETLRAGIRHEDVLCRYGGEEFVILMPRMP 646 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYE 431 A AE R + + + + T S G ++ P+E+ + AD ALY Sbjct: 647 LAIAAERAELWRSKIAEIRVTFGNFEL--SFTASAGVAAYPDHGKMPDELTQAADQALYT 704 Query: 432 AKETGRNKVVVRDV 445 AK GRN+VVV Sbjct: 705 AKNEGRNRVVVYSA 718 >UniRef50_A1ASG6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASG6_PELPD Length = 505 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 9/196 (4%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMI 316 ++V + + + RDPLT+++NR + LTV+ P +M+ Sbjct: 310 GTISVEFADITERTRMQEELREASERDPLTSLYNRRKLYQLLTVELTRTRRHGHPLTLML 369 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 +DIDHFK++NDT+GH GD V+ V +I +R D+LAR GGEEF + + D + A Sbjct: 370 LDIDHFKRINDTFGHDSGDLVLTQVAELISAILRSTDILARYGGEEFVIACPETDMDGAA 429 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 LAE+IR ++ + VTIS+G + E+ + N + + AD ALY AKE G Sbjct: 430 VLAEKIRSSIAMFSFPTVGA-----VTISVGISLL-ESKDDINALIKRADTALYAAKEMG 483 Query: 437 RNKVVVRDVVNFCESP 452 RN+VV R + C +P Sbjct: 484 RNRVV-RSTEDGCPNP 498 >UniRef50_B7JW72 Diguanylate cyclase n=5 Tax=Chroococcales RepID=B7JW72_CYAP8 Length = 462 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 10/275 (3%) Query: 179 IAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVT------VIAFCAV 232 I NE+ + +++ + + +I + L + + + + + + T A + Sbjct: 181 IINDVNEDPRYIYEGTMIRSLICVPLKVCNETIGVIKVSHTQPSNYTTKDLKLFTALTSQ 240 Query: 233 LYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFN 292 + + + +V + + + A + +A D LT + N Sbjct: 241 AAAAIQTAQYYNKLKDYSETLEQKVAERTQELEQANQELQKANDKLEYLAIIDGLTQVHN 300 Query: 293 RNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI- 349 R YF L + ++ +++ D+D+FK ND + H GD ++ + ++ + Sbjct: 301 RRYFNQYLVQEWRRLMRERQSLSLILCDVDYFKLFNDHYLHQAGDDCLQKIAQVMQDVVK 360 Query: 350 RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAV 409 RP DL+AR GGEEF ++L++ + A +A++IR VE+L + + VT+S+G Sbjct: 361 RPADLVARFGGEEFAIILSNTNELGAARVAQKIRLEVEKLKIPHALSQCSEYVTLSLGIA 420 Query: 410 -VTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 ++ + AD ALY+AK GRN+ + Sbjct: 421 TTIPTPDISSERLILAADKALYQAKNMGRNRYCLY 455 >UniRef50_C6XL77 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Alphaproteobacteria RepID=C6XL77_HIRBI Length = 459 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 2/214 (0%) Query: 231 AVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNI 290 A+ L S V + V ++ + + L + +A D LT + Sbjct: 241 ALAVRALDLGASDILVRPIDPEELLARVKTQVSKKRYIDSLRARLDQSMELAVTDQLTGL 300 Query: 291 FNRNYFFNELTVQSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 NR Y N+L A P +++ D+DHFKKVND GH VGD+V++ + + + Sbjct: 301 HNRRYMENQLEQFMKRANMGGGPVSILLCDLDHFKKVNDGHGHDVGDEVLRQFSDRLMHN 360 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 IRP D+ R GGEEF V++ D + A+ AERIRE V+ VT+S GA Sbjct: 361 IRPSDIACRYGGEEFMVIMPDTTIQMAQLTAERIREKVDGAPFSINNGLGRLDVTMSGGA 420 Query: 409 VVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 VT + ++ + AD ALY AKE GRN++V Sbjct: 421 SVTFPPDDSVAQLIKRADEALYNAKENGRNRIVC 454 >UniRef50_Q1Z0H7 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q1Z0H7_PHOPR Length = 368 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 163/374 (43%), Gaps = 30/374 (8%) Query: 72 FSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLAL 131 + N + + + + + +II + S + + Y F+ + LI +AL Sbjct: 15 YRNIRIGFRWATTISLIFLIMIISPIWLSGIKESDLYLDRSWTQYSFQAIVY--LIGIAL 72 Query: 132 VNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVW 191 + K L LF + L+ ++ ++ + W Sbjct: 73 Y----HPQSPPQEWRKIAILYALLFGT------SWALAIYHIAFIGQM-----------W 111 Query: 192 KASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVL--YNISLLFMSRYSVSTW 249 ++ + + M +LL + I+ + V ++ + ++ LL + S Sbjct: 112 TSAEIASDLIMMTSLLGFYALRQAVYAAIFPVLLVSSWANYVEAGHLLLLPSEKMLASCI 171 Query: 250 YISRTIEVVSK-LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SAS 306 + + + + V ++ ++A +D LTN++NR +F E+ A Sbjct: 172 IVETGRKTLYRWFYNSVEKDHENQRLVKKLSDLATKDQLTNLYNRRFFEYEIDKHYHLAK 231 Query: 307 AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGV 365 P ++++D+DHFK ND+ GHP GD +K V I+ KS+ R D ++R GGEEF + Sbjct: 232 RNNLPLSIILIDVDHFKYYNDSLGHPAGDLCLKRVARILQKSLLRTSDSVSRYGGEEFII 291 Query: 366 LLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLA 425 +L + E AK +AERI ++++ +P + VT+S G + + P ++ + A Sbjct: 292 ILPNTHLEGAKKVAERINNSLQQEAIPHPSSNVSNFVTLSQGITIWKTQ-KGPEQLVQEA 350 Query: 426 DNALYEAKETGRNK 439 D+ LY+AKE GRN+ Sbjct: 351 DDQLYKAKEAGRNQ 364 >UniRef50_A0LD73 Diguanylate cyclase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD73_MAGSM Length = 513 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 7/232 (3%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 + + V+ V + L+ +V YI ++V + + VI + + + Sbjct: 274 FYCMPVLHSGTVGNVVQLVVEPDMAVMFPYIIPFLQVFLRESSSVIESKRL---MEKLRE 330 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMDIDHFKKVNDTWGHPVGDQVI 338 A +DPLT + NR + AS+Q+ V++MD+DHFK VNDT GH VGD V+ Sbjct: 331 SALKDPLTGLNNRRFLEEYERTIVASSQRKEMFLSVLMMDLDHFKMVNDTHGHQVGDAVL 390 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K++ ++ + R DL+ R GGEEF V+L + +AE+IRE VERL + P + Sbjct: 391 KSLAGVLMQQTRASDLVVRYGGEEFMVVLQNERPHMGNQIAEKIRETVERLKINVPGGCL 450 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCE 450 + TISIG + + +++ AD ALY AKE GRN+V+ + Sbjct: 451 QK--TISIGVAEFPTDGTDFDDVVEKADMALYRAKEQGRNRVISHSASETED 500 >UniRef50_D2L2K3 Diguanylate cyclase with GAF sensor n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2K3_9DELT Length = 499 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 5/170 (2%) Query: 277 VTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVG 334 K A D LT I NR F L ++ P ++++DIDHFK +NDT+GH VG Sbjct: 314 QVKVRADHDGLTRIHNRRAFDERLVEELRRHQRYHHPMSLLMLDIDHFKGINDTYGHLVG 373 Query: 335 DQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNP 394 D V++ V ++ +++R D AR GGEEF ++L E+++ LAER+R + + Sbjct: 374 DHVLREVGRLMTETLRSTDFTARYGGEEFVIILPQTAEEQSRVLAERLRGLIADARFVHD 433 Query: 395 EYAIPQKVTISIGAVVTQENALNP-NEIYRLADNALYEAKETGRNKVVVR 443 + P +T+SIGA AL+ ++ AD ALY+AK GRN+V Sbjct: 434 GH--PFSITVSIGAATLLPGALSKRKDLLDKADKALYQAKTLGRNQVCTA 481 >UniRef50_Q3ADQ4 Response regulator/sensory box protein/GGDEF domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADQ4_CARHZ Length = 668 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 8/188 (4%) Query: 259 SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMI 316 KL I + ++ D LT +NR YF L + A K P+ +++ Sbjct: 482 EKLIETFIDLTERKKLEEQLYRLSITDYLTQAYNRRYFTEMLEREIERAKRTKMPFALIM 541 Query: 317 MDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 +DIDHFK VND +GH GD V+KT+ N+I IR D LAR GGEEF +LL + E+A Sbjct: 542 LDIDHFKNVNDRFGHAAGDLVLKTLANLIKNRIRQTDCLARWGGEEFVILLPNTPVEKAA 601 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 LAE +RE + L +VT S G + + AD LY AK +G Sbjct: 602 GLAEELREQLSMLEIPG-----VGRVTASFGVTGYCPGD-TLDTLLMRADQMLYTAKASG 655 Query: 437 RNKVVVRD 444 RN V + Sbjct: 656 RNCVRFSE 663 >UniRef50_A1ARY2 Diguanylate cyclase with GAF sensor n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ARY2_PELPD Length = 355 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 2/197 (1%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASA 307 + I + L T +A D LT + NR YF L + A Sbjct: 155 FDKNRISQILVLASFAAISIENAKFHEETHQLAINDSLTGLNNRRYFDKVLPQEYERAHR 214 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 + P+ +M++D+D+FK NDT GH +GD+++ T+ ++ K++R D R GGEEF V+L Sbjct: 215 EGLPFSLMMIDVDNFKLFNDTHGHHLGDRILATIGRVLRKTLRSIDFAFRYGGEEFVVIL 274 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 + D E A +AERIR+ V + + VT+S+G +A + +AD Sbjct: 275 PETDLESAHKVAERIRQRVMAESRKLLRNPQDRPVTVSVGISCYPRDAACSITLLAMADQ 334 Query: 428 ALYEAKETGRNKVVVRD 444 LY+AK TGRN+V+V + Sbjct: 335 LLYQAKRTGRNRVLVAE 351 >UniRef50_B9MBS6 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Comamonadaceae RepID=B9MBS6_DIAST Length = 890 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 262 TVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDI 319 + + + + + +A D LT + NR L + P V+++DI Sbjct: 703 MATFVDVTEQRAQHELLRKLAFMDGLTGLANRRQLDRTLKAEWRRCRRSGQPLSVVMVDI 762 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKAL 378 DHFK+ ND +GH GD ++ V + + R DL+AR GGEEF LL + D + A+A Sbjct: 763 DHFKQFNDLYGHQQGDDCLRAVAAALRGGLGRSHDLVARYGGEEFVCLLPECDLDGARAK 822 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALYEAKETGR 437 A+ + V ++ I VT+S G P ++ AD LY AK GR Sbjct: 823 AQALCRAVHARQMEHRGSPIAPVVTVSAGVACVVPGAEDTPEQLLARADANLYRAKAAGR 882 Query: 438 NKV 440 N+V Sbjct: 883 NRV 885 >UniRef50_Q085X7 Diguanylate cyclase n=2 Tax=Alteromonadales RepID=Q085X7_SHEFN Length = 357 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 147/356 (41%), Gaps = 19/356 (5%) Query: 95 IQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCIS 154 + I+ S+ + LF + + + + +++ + N + Sbjct: 1 MLTFIKNESKSNGELQQARVISLFSLVGMSVTFVMGVISLFNSNNVLTITLFVSSIIYCL 60 Query: 155 LFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFN 214 + V LSS Y+L+I V + + I + V++Y Sbjct: 61 AYIVLK-KYNKLNLSSFIIIYSLYILMFYLVFTGGVEQTGPLWI-----FIVAPVSVYVL 114 Query: 215 GLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSA 274 GL Y + N + ++ A++ + + ST + R I T + + Sbjct: 115 GLSYGLVNLLFFLSIIAIIMFSPIEMPQYATYSTEFKVRLILSFLTTTFLSALYEYSRML 174 Query: 275 L--------RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKK 324 + + +A DPLT + NR L + + P V++ D+DHFK Sbjct: 175 SYNSALKLGKKYQQLALSDPLTTLANRRNALTILQQEKSRISRNNEPLSVLLCDLDHFKM 234 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VND +GH GD V+ + + +S+R D +AR GGEEF +L E+A +AE+IR Sbjct: 235 VNDKYGHNCGDMVLTELSQVFKQSVRQQDCVARWGGEEFLFILPQTSAEQASVIAEKIRT 294 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 NV ++ I +TISIG + N +E+ AD LY+AK+ GRN+V Sbjct: 295 NVHHHKVHFLKHEI--SLTISIGISQLT-DDQNIDELINNADRNLYQAKKNGRNQV 347 >UniRef50_Q3JE99 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Nitrosococcus oceani RepID=Q3JE99_NITOC Length = 661 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 4/186 (2%) Query: 267 FMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKK 324 ++ + A R +A D LT + NR Y + A +TP+ ++MD+D FK+ Sbjct: 458 YLADLAVANRRLGQMAMTDSLTGLPNRRYAMERMEQAWAEYERNQTPFSCLVMDLDFFKR 517 Query: 325 VNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRE 384 VND +GH +GD V+ + N+ S R D++ R+GGEEF V+ A +AER+R Sbjct: 518 VNDQYGHEIGDSVLLEIANVFRGSARSSDIICRLGGEEFLVVCPHTVATEAFQVAERLRR 577 Query: 385 NVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 VE + + V SIG + E + N++YRLAD ALY+AK GRN+V + Sbjct: 578 AVEEHSWTMLDSTSVLSV--SIGLAASSEGMQHWNDLYRLADQALYQAKRNGRNRVCMAP 635 Query: 445 VVNFCE 450 N + Sbjct: 636 SPNGKD 641 >UniRef50_B7JZG8 Diguanylate cyclase with PAS/PAC sensor n=5 Tax=Cyanothece RepID=B7JZG8_CYAP8 Length = 668 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 8/233 (3%) Query: 219 DIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVT 278 + +IA L + L +S + E VSK + + Sbjct: 441 GRTLCIPMIAHGETL-GLLYLNLSNVELFNPSQQHLAEAVSKQIAIAFANLKLRET---L 496 Query: 279 KNIAHRDPLTNIFNRNYFFNELTVQSA---SAQKTPYCVMIMDIDHFKKVNDTWGHPVGD 335 + + RDPLT +FNR Y + + Q ++++DIDHFK+ ND +GH GD Sbjct: 497 EEQSLRDPLTGLFNRRYLEISINRELNTIIQDQDYSLGLIMLDIDHFKQFNDNFGHEAGD 556 Query: 336 QVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPE 395 V++TV N + IR D+ R GGEEF ++L + AE+IRE++++L + Sbjct: 557 LVLQTVANCLQNHIRQSDIACRFGGEEFMIILPRASLNKTLERAEKIRESIKQLKIEYKS 616 Query: 396 YAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 + +T S G +N +E++ AD ALY+AK+ GR++VV N Sbjct: 617 QPL-DSITASFGVAAFPQNGTTLHELFIDADKALYQAKKQGRDRVVCAFSPNT 668 >UniRef50_C4XS30 GGDEF domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS30_DESMR Length = 498 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 5/165 (3%) Query: 282 AHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A D LT I NR F L ++ + ++++DIDHFK +ND +GH VGD V++ Sbjct: 319 ADHDGLTRIHNRRAFDERLIDELRRHQRYRHAMSLLMVDIDHFKGINDRYGHLVGDHVLR 378 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V +I+ +++R D AR GGEEF V+L E+A+ LAER+R + + Sbjct: 379 EVGSILSETLRSTDFTARYGGEEFVVILPQTAEEQARILAERLRGAIAEARFVHDGEDF- 437 Query: 400 QKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETGRNKVVVR 443 +T+SIG Q AL ++ AD ALY+AK GRN+V Sbjct: 438 -SITVSIGVSALQPGALTRRKDLLEKADKALYQAKHLGRNQVCTS 481 >UniRef50_A5GCU4 Diguanylate cyclase n=2 Tax=Geobacter RepID=A5GCU4_GEOUR Length = 422 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 9/233 (3%) Query: 217 RYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV-----IFMCHI 271 R + +V+ +V + L + ++ TI + L + + ++ Sbjct: 191 RSQGYKIGSVMGALSVTIPVVTLIRETDTDKLMIVAATIGTIGLLLGITYFLTWRLVLNL 250 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTW 329 A + K +A D LT + NR L + A P C++++D+DHFKK+NDT+ Sbjct: 251 DMAQKHLKRLASTDELTGLKNRRQIMKRLDEEYQRAIRLGEPLCLIMLDLDHFKKINDTY 310 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GHP GD V+K V + K++R D+L R+GGEEF ++ E A LA+R+R VE Sbjct: 311 GHPFGDLVLKCVAGHMKKALRRYDVLGRIGGEEFLIVSPGTTREEAVVLAQRLRSTVEME 370 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 + + +T+S G + N + + AD+ALY AK+ GRN+VV Sbjct: 371 KIAYEDKKV--TITVSCGVAFLYKGDDNVEILLKRADSALYIAKQEGRNRVVA 421 >UniRef50_B8DIJ3 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DIJ3_DESVM Length = 1000 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 4/190 (2%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMD 318 + + + + A DPLT I NR FF + + A P V+++D Sbjct: 794 VLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLD 853 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 +D FK+VND +GH GD V+ V +++R D+L R+GGEEF +L + D + A A Sbjct: 854 LDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAA 913 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 AER+R VE + + + T+SIG + ++I R AD+ALY AKE GRN Sbjct: 914 AERLRRAVEEMDVPFSGQRL--RCTVSIGLALRGPGDGALDDILRRADSALYAAKEAGRN 971 Query: 439 KVVVRDVVNF 448 +V++ VN Sbjct: 972 RVMLARAVNS 981 >UniRef50_Q0A9X2 Diguanylate cyclase n=3 Tax=Proteobacteria RepID=Q0A9X2_ALHEH Length = 295 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 5/208 (2%) Query: 239 LFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN 298 + + + ++ + + + + + +A D LT +++R Sbjct: 81 MQLDLQQANQKLEAQAESLRTLNEALEKEVQARETLAEELHRLAMMDDLTGVYSRRQVLE 140 Query: 299 ELTVQSASAQK---TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLL 355 + A ++ TP +++MD+DHFK++ND +GH GD V+ ++ +++R D + Sbjct: 141 VGERELARRRRQGLTPLTLLMMDLDHFKRINDKYGHAAGDTVLVAFSEVLRRNLRESDAV 200 Query: 356 ARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA 415 R+GGEEF +L D+D + ALAERIR + L E AI ++T+SIG Sbjct: 201 GRLGGEEFLAVLPDVDLQGGLALAERIRSEIAELRIPWQEEAI--RLTVSIGVAGILAVH 258 Query: 416 LNPNEIYRLADNALYEAKETGRNKVVVR 443 + ++ AD+ALY+AK GRN+V V Sbjct: 259 ESLDDTIMRADDALYQAKVAGRNRVTVA 286 >UniRef50_A3DHG2 Diguanylate cyclase with GAF sensor n=3 Tax=Clostridium thermocellum RepID=A3DHG2_CLOTH Length = 415 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 3/224 (1%) Query: 225 TVIAFCAVLYNISLLFMSRYSVS-TWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAH 283 + I NI+L + YS S ++ I V + + L + A Sbjct: 188 SYICLPITEGNITLGILQLYSKSKNYFDEALISKVKSYIEVAKPVISSKRTLHQLRKNAT 247 Query: 284 RDPLTNIFNRNYFFNELT--VQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 D LT ++NR + L ++ V++MDID+FK++NDT+GH GD V+ T Sbjct: 248 TDKLTKLYNRRFLEQYLDNQLEITGFSNQKLSVIMMDIDNFKRINDTYGHNAGDAVLVTF 307 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 +I + +R DL+AR GGEEF +L DT+ A +AERIRE++ Sbjct: 308 ARVILRCLRQTDLVARYGGEEFIAILPSSDTKNAYDIAERIRESIAAEPMPKINDVQLPN 367 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 ++ S G +A N N++ + AD ALY+AK+ G+N+V+ Sbjct: 368 ISCSFGVSTYPTHAKNKNDLIKAADIALYKAKQAGKNRVITYSE 411 >UniRef50_Q1QXY8 Diguanylate cyclase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXY8_CHRSD Length = 608 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 3/215 (1%) Query: 233 LYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFN 292 + + + + ++ + ++ + + RD LT ++N Sbjct: 395 ILGVLQVHWLPERDADDDNDARVDFAKGVAEDMVLSLSNVRLREQLEEASIRDALTGLYN 454 Query: 293 RNYFFNELTVQSASAQKT--PYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR 350 R + L + A A++ P CV+++DIDHFK +ND +GH +GD+ + V ++ +R Sbjct: 455 RRFLDETLARELARAERQAVPLCVLMLDIDHFKPINDDYGHALGDRALVAVAELLNAHVR 514 Query: 351 PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV 410 DD++ R GGEEF +++ + A+ + +R V L + P ++T+S+G Sbjct: 515 RDDIVCRYGGEEFVIIMPGAGLDAAQRRGDHLRRCVSALDVEA-NVPAPIRLTVSLGLAC 573 Query: 411 TQENALNPNEIYRLADNALYEAKETGRNKVVVRDV 445 ++ N + AD ALYEAK+ GRN++ + Sbjct: 574 YPQHGDNAEHLLHSADMALYEAKQGGRNRLTIASP 608 >UniRef50_A8UY33 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY33_9AQUI Length = 345 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 4/187 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCV 314 + +L + + LR K A+ DPLT + NR F L+ P+ V Sbjct: 160 FIQRLEEQRGEIERLREELRRVKEEANIDPLTGLRNRRSFERALSEFFRDFKKFGYPFSV 219 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 +++D+D+FK++NDT+GH GD+V+K + NI+ +R D+ AR GGEEF ++L I E Sbjct: 220 IMIDLDNFKQINDTYGHLAGDKVLKEIGNILRNYLRAKDVPARTGGEEFTIILPGITREE 279 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A +AER+R+ + T ++ + I T S G E P ++ RLAD LY+AK Sbjct: 280 ALMVAERLRKVIANYTVEHEDKKINP--TASFGVAEVNEQVETPEDLLRLADENLYKAKR 337 Query: 435 TGRNKVV 441 G+N VV Sbjct: 338 RGKNTVV 344 >UniRef50_B3PKF1 Response regulator n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKF1_CELJU Length = 514 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 4/195 (2%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVM 315 + + + + + ++ D LT I+NR F + Q A + P + Sbjct: 202 IRAMERIAEMRDQLNQLNTELEALSQLDSLTQIYNRRTFNDLAEQQWALAKRHQLPISAL 261 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTER 374 ++D+DHFK ND +GHP GD +K + I + R DL R GGEEF VLL + DT+ Sbjct: 262 MIDVDHFKLFNDHYGHPAGDSCLKKISQAIKSCLHRSADLFGRYGGEEFIVLLPETDTQG 321 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALYEAK 433 A +A+ I + +E L + VT SIG + + E+ + AD ALY+ K Sbjct: 322 ALHVAQSINQAIEALNLRHDVSPSSHLVTASIGGATCVRTTGHSLEELIKSADRALYKVK 381 Query: 434 ETGRNKVVVRDVVNF 448 +GRN+ ++ +VV Sbjct: 382 RSGRNRALIDEVVTH 396 >UniRef50_C1D6I3 Diguanylate cyclase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6I3_LARHH Length = 350 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 5/227 (2%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 V+ + LL + + + + + + + + +V K Sbjct: 119 VLSAAVLPLVRQNSLLGLLAIGCHDAAHYEPGQGTDFLERFAAIVTLCLENVLNRERLKW 178 Query: 281 IAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 + DPLT ++NR YF L + P +++D DHFK++NDTWGH GD V+ Sbjct: 179 LGLTDPLTGLYNRRYFEQRLQEEAQRTRRHGDPLACLMLDADHFKRINDTWGHQAGDVVL 238 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 K + + + +R D+ AR+GGEEF VLL + +AERIR + + Sbjct: 239 KVLARRVRQQLRGCDVAARIGGEEFAVLLPSTPVRHVQLVAERIRLAIAGEPV-HVSPDC 297 Query: 399 PQKVTISIGAVVTQEN--ALNPNEIYRLADNALYEAKETGRNKVVVR 443 +V++S+GA + ++P + AD ALY+AK GRN+ ++ Sbjct: 298 VLQVSVSLGAAMLAPGAADISPERLMARADAALYQAKRNGRNRTMLA 344 >UniRef50_B3E6Y7 Diguanylate cyclase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Y7_GEOLS Length = 459 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 87/185 (47%), Gaps = 5/185 (2%) Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFK 323 F+ + A +A D LT + NR + + + Q+ + +++DID FK Sbjct: 275 RFLKELREAQEKLVEMATIDSLTGLLNRRAGLERVEEELSRHQRSERAFACLLLDIDRFK 334 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIR 383 K+NDT+GH GD V+ + + +R D++ R GGEEF +LL D A+ AE+IR Sbjct: 335 KINDTYGHQAGDAVLSEFGATLRRHVRKHDIVCRYGGEEFLLLLPDTSPSAARTTAEKIR 394 Query: 384 ENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVR 443 I VT SIG + Q + AD ALYEAK +GRN+VV Sbjct: 395 AVTAATPIMFAGRQIA--VTTSIGISMMQ-GDETAKAMIARADAALYEAKNSGRNRVVCA 451 Query: 444 DVVNF 448 + Sbjct: 452 EANEL 456 >UniRef50_A3WMD3 Phytochrome sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Idiomarina baltica OS145 RepID=A3WMD3_9GAMM Length = 689 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQ 308 ++ + + + + + A + +++ H D LT ++NR + L + Sbjct: 498 LAEDLAIGASAYQIEQLNQELTEANQRLEHLVHTDALTQVWNRYHMEQTLEEEVKRCKRH 557 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 V+++DIDHFK+VND +GH VGD+V+K + I + +R D+ R GGEEF ++ Sbjct: 558 GRDLAVILLDIDHFKRVNDDYGHDVGDKVLKLISEAIHQWLRSSDVFGRWGGEEFLIIAP 617 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + D E A LAER+R + L +VT S G + + N + + ADNA Sbjct: 618 ETDLESANQLAERLRRRLSNLQF-----DKVGQVTASFGVAELLPS-EDRNSLVKRADNA 671 Query: 429 LYEAKETGRNKVVVRD 444 LY+ KE+GRN V V Sbjct: 672 LYQVKESGRNSVEVSP 687 >UniRef50_Q0A8J1 Putative GAF sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A8J1_ALHEH Length = 689 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 8/196 (4%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASAQ 308 ++ + V+ + + + A R K A D LT ++NR ++ ++ Sbjct: 500 LADEVAVLLSRKEIDLLNAQLTEANRRLKRQATTDSLTGVWNRYRMQEQIELERGAHERY 559 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 TP +++ DIDHFK VND +GH GDQV+ + + +R D L R GGEEF VL T Sbjct: 560 GTPCSLLLFDIDHFKAVNDQYGHEAGDQVLVALARAVVGELRATDFLGRWGGEEFIVLAT 619 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + E A LAER+R+ + L VTIS+G + + AD A Sbjct: 620 NSAPEEAWTLAERLRQCIAGLRFPG-----VGPVTISVGVASLSRGD-TVDRLIDRADRA 673 Query: 429 LYEAKETGRNKVVVRD 444 +Y AK+ GRN+V + Sbjct: 674 MYRAKQRGRNRVEQAE 689 >UniRef50_A6G7C6 FHA domain/GGDEF domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7C6_9DELT Length = 297 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 65/169 (38%), Positives = 92/169 (54%), Gaps = 4/169 (2%) Query: 275 LRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHP 332 ++ D LT +FNR YF L + A P ++I DIDHFK+ NDT+GH Sbjct: 128 HEEIFRLSTVDGLTQVFNRRYFMETLERELSRARRYDRPLALLIFDIDHFKRCNDTYGHR 187 Query: 333 VGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD 392 GD V++ + ++ R D+++R GGEEF V+L +ID A A AE+IR+ + T Sbjct: 188 AGDFVLRRIAELVTMRARKVDVVSRYGGEEFTVILPEIDIRGASAFAEKIRKLIADETFI 247 Query: 393 NPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 IP VTISIG + N +++ + AD LY AK GRN+VV Sbjct: 248 FEGRKIP--VTISIGVAEIGPSVANADDMIQTADRRLYAAKTGGRNRVV 294 >UniRef50_Q47C76 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C76_DECAR Length = 548 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 101/189 (53%), Gaps = 3/189 (1%) Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVM 315 ++ + + + I + + ++ D LTN+FNR +FF+ + ++ VM Sbjct: 356 ITGICGISTDITPIKHYQKELERLSQFDELTNLFNRRHFFSLAKHELNRSSRYRSKLSVM 415 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++DIDHFK++ND GH GD V+ + IG S+R D+ R+GGEEF +LL + D E+A Sbjct: 416 MLDIDHFKRINDGHGHKTGDLVLANIGKQIGDSLRDSDIAGRMGGEEFAILLPETDLEQA 475 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 +AER+R+ V D + T+SIG + ++ + AD ALY AK + Sbjct: 476 SIMAERLRKQVAETWLDIGDGRT-LNCTLSIGLATKSDQQIDLENLLHQADTALYAAKNS 534 Query: 436 GRNKVVVRD 444 GRNKV D Sbjct: 535 GRNKVSCAD 543 >UniRef50_C6MHA0 Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MHA0_9PROT Length = 568 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 99/449 (22%), Positives = 172/449 (38%), Gaps = 40/449 (8%) Query: 2 EKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFM 61 E D+ ++TVL+ + A+VL + + Y +I + VA+ FM Sbjct: 144 EHDFRAGNTTVLIRIESDDAMVLPIYFLTTEETADRNMLQAYSYGLIYGIILALVAYNFM 203 Query: 62 QLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQM 121 +I R L L+ T Q + + N + I Sbjct: 204 L--YIGLRSGPYFFYSLYLLLFLLLNAAYTGHGYQWLWPDSPLWQQWSNPVLI------- 254 Query: 122 SLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAE 181 LC L A + + + +C F L + Sbjct: 255 MLCTLSGCAFALNFLDIKTASPRIHQSVIVCCLSF------------------SALTLIA 296 Query: 182 LTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFM 241 + + + S + IF + +L + + R + + ++A + + Sbjct: 297 ILTDKFIITLFISLL--FIFYFYSLAVILGIISLRRKNRFAQYFLLASIFTICGGIITAN 354 Query: 242 SRYSVSTW----YISRTIEVVSKLTVMVIFMCHIFSALR----VTKNIAHRDPLTNIFNR 293 + + + Y + I +V+ ++ + + F+ + + A D LTN+ NR Sbjct: 355 TVWGFIPFNWLTYRATEIGMVADAILLALALAERFNINQSEKLAAEKRADIDLLTNLNNR 414 Query: 294 NYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRP 351 F+ + A K+ V+I+DID FK +ND +GHPVGD V+ + I K R Sbjct: 415 RAFYKFVQPMWAISLRSKSSTSVIILDIDDFKLLNDNYGHPVGDLVLVRLAETIQKEARS 474 Query: 352 DDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT 411 D+LAR GGEEF + L + A +A+R+R+ + + T S G T Sbjct: 475 GDILARWGGEEFLIFLPETQLADAITIADRMRKRITTIQISIDNGE-KISFTASFGVATT 533 Query: 412 QENALNPNEIYRLADNALYEAKETGRNKV 440 Q+ ++ NE+ AD LY AK+ GRN+V Sbjct: 534 QDINVSLNELIAQADRQLYHAKKKGRNRV 562 >UniRef50_D1C9S7 Serine/threonine protein kinase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C9S7_SPHTD Length = 1765 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 8/224 (3%) Query: 221 WNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKN 280 W GV +I+ V + L +S + R + + Sbjct: 1547 WLGVPLISESRVAGVVVL----TSQISGAFGEREAGIAFTFAGQAGVAIENARLFAEVQR 1602 Query: 281 IAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVI 338 +A D LT +NR + + + AQ+ P +I+DID FK+VND GH VGD+V+ Sbjct: 1603 LAVTDDLTGTYNRRHLLTTAERELSRAQRFNRPLAAIILDIDEFKRVNDAHGHAVGDEVL 1662 Query: 339 KTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAI 398 + V + + +R D+L R GGEEF ++L + D A +AER+R ++ Sbjct: 1663 RAVADRLRSGLREVDVLGRYGGEEFVIILPETDLISAYQIAERLRNSIAAEPIAT--STG 1720 Query: 399 PQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVV 442 P VTIS+G + + D+ LY AK GRN+VVV Sbjct: 1721 PVSVTISLGVAAADPTTPDFASLLSRIDDLLYTAKRRGRNRVVV 1764 >UniRef50_B9Z0Y0 Diguanylate cyclase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0Y0_9NEIS Length = 528 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 89/451 (19%), Positives = 155/451 (34%), Gaps = 32/451 (7%) Query: 5 YLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLY 64 Y+ I +++ L + L + ++ + AL F F L Sbjct: 97 YVSIYPPLMICLWWTLFFGWAWGAIPAYLATFSLALYAHMPLPWALLFACANPLGFAVLV 156 Query: 65 FIYDRRQFSNCVLS---LAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQM 121 Y + S + + + + + +I + I+ + Sbjct: 157 LGYRTIAMPLHLRSANAVLYYTLMSFVASVFSSAGALIWCYTNLVDPTGLLPIWQGWWLG 216 Query: 122 SLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAE 181 + L + + + L + A + +A Sbjct: 217 GFLQCLLLGAPLLLVSQPALQRWRDRHTRLWRTA--------AAESRRLSLQLVIAIVAG 268 Query: 182 LTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFM 241 + +W S L + + W V A A Sbjct: 269 VLIYGWLTLWLGSNTVRHALRASELAILPGAVTTMLATTWTFYWVFALIAAFVGFF---- 324 Query: 242 SRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELT 301 Y + T+++ + +V+ + A ++A D LT + NR L Sbjct: 325 -GYRMFTYWLDSSTRLVN----------ELAEANSKLAHLARTDTLTGLPNRRALEEALE 373 Query: 302 VQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVG 359 Q + ++++DIDHFK VND +GH GD VI+ + + ++IR D+ R G Sbjct: 374 QQLQRSRRNGEQASLVLLDIDHFKVVNDRYGHDAGDAVIRALGKAMSETIRNVDVAGRWG 433 Query: 360 GEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPN 419 GEEF V+L ++D E A A AER+R VE T + E + + TIS+G + + Sbjct: 434 GEEFLVVLANVDEEGAAAFAERLRTRVESSTVAHGE--LHVRYTISLGVA--PLSTPHRE 489 Query: 420 EIYRLADNALYEAKETGRNKVVVRDVVNFCE 450 + AD ALY AK GRN+ + E Sbjct: 490 AWLKRADEALYRAKLDGRNRTAIAQARGEAE 520 >UniRef50_Q1NJD1 PAS:GGDEF:Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NJD1_9DELT Length = 469 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 4/190 (2%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPY 312 +E ++ +T V+ + + + K ++ D LT +FN+ YF L V+ A + P Sbjct: 281 VEHITDITSRVLAEQALQKSEQRYKELSIVDELTGLFNKRYFNKHLRLEVERARRYQHPL 340 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 ++IMDID+FK NDT+GHP GD+V+ + ++ S+R +DL R GGEEF V+L D Sbjct: 341 SLLIMDIDNFKHYNDTYGHPAGDRVLSALGGMLRDSMRLNDLACRFGGEEFVVILPMTDG 400 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 E LAER+RE L P + + T+S+G E+ +P + AD LY A Sbjct: 401 ETGLKLAERLRERFAALEFQ-PLEGVVIRKTMSVGVAQF-EDEESPESLLARADKNLYAA 458 Query: 433 KETGRNKVVV 442 K GR++ ++ Sbjct: 459 KAAGRDRSIL 468 >UniRef50_C6NZM9 Diguanylate cyclase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZM9_9PROT Length = 379 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 71/234 (30%), Positives = 106/234 (45%), Gaps = 8/234 (3%) Query: 223 GVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIA 282 + ++ I L M+ + + + + + +L + K + Sbjct: 131 SMILLPLMRQDELIGSLNMASSTAERFTADSSTDFIERLANIFSICLENSLNHERLKLVG 190 Query: 283 HRDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKT 340 DPLT I+NR Y ++A ++P M +DID FK++ND++GH +GD+++ + Sbjct: 191 LTDPLTGIYNRRYLETRCQEEAAHVRRYRSPLSCMFLDIDKFKRINDSFGHNIGDKILCS 250 Query: 341 VVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQ 400 V I +R +D+LAR GGEEF VLL A +AERIR V Sbjct: 251 VTAQIKSQLRSNDVLARYGGEEFVVLLPQTGIRGACDIAERIRRTVAEQAFQIGRED-EL 309 Query: 401 KVTISIGAVVTQENALNPN-----EIYRLADNALYEAKETGRNKVVVRDVVNFC 449 KVTISIG +A ++ AD ALY AKE+GRNKVV Sbjct: 310 KVTISIGVAQAPVDADGDERTVAHQLLAAADEALYLAKESGRNKVVSDHNRPAS 363 >UniRef50_Q1D632 GAF domain/GGDEF domain protein n=2 Tax=Cystobacterineae RepID=Q1D632_MYXXD Length = 710 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 8/225 (3%) Query: 224 VTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAH 283 ++A +L + + + + R IEV++ + + + +A Sbjct: 479 FPLVAGDRILGTLVAGSRKKAAFEQDVL-RMIEVIAIQAAQAVLRAQL---YEQMERMAT 534 Query: 284 RDPLTNIFNRNYFFNELTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTV 341 D LT ++N F + A + + +++ D+DHFK VNDT+GHP GDQV+K V Sbjct: 535 TDGLTGLYNHRTFQAKADEVLAQSRRYQRKFSLILTDVDHFKSVNDTYGHPTGDQVLKGV 594 Query: 342 VNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 II R D++AR GGEEF +++ + D + A ++ERIRE V+ P + Sbjct: 595 ARIIKTMARDTDIVARYGGEEFVIIMPETDAKGAFTISERIREAVKAEVFQTEMG--PLR 652 Query: 402 VTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVV 446 +T+S+G ++A+ ++ LAD LY +K GRN+ V D++ Sbjct: 653 ITMSLGIATFPDSAMEKQQLIDLADQCLYHSKRNGRNQSVTVDIM 697 >UniRef50_A9WIR5 Diguanylate cyclase n=3 Tax=Chloroflexus RepID=A9WIR5_CHLAA Length = 589 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 5/244 (2%) Query: 212 YFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHI 271 + ++ +G + A V I + + Y + + L V H Sbjct: 348 LLPEIEGELADGSLLAAPLIVGDRIIGALLVWSNHHDAYTMADLNALELLAATVAVALHN 407 Query: 272 FSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMDIDHFKKVNDTW 329 ++ A D LT + NR +F L ++ TP + ++D+DHFK++NDT+ Sbjct: 408 AFRFAQIQSQAITDNLTGLANRRHFLQVLHQEMERNRRYHTPVSIAMIDVDHFKQINDTF 467 Query: 330 GHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERL 389 GH GD V++ + + +R D+LAR GGEEFG++L + E+A ER+R + Sbjct: 468 GHIAGDYVLREIARRCRQQLRDVDVLARYGGEEFGLILPETTYEQALKATERLRTVLATT 527 Query: 390 TGDNPEYAIPQKVTISIGAVVTQENA-LNPNEIYRLADNALYEAKETGRNKVVVRDVVNF 448 I TISIG +P+ + AD ALY AK+ GRN+V + Sbjct: 528 PIMIDGRQINP--TISIGVASFHPTVYPDPSSLIADADRALYLAKQQGRNRVCGVQELTN 585 Query: 449 CESP 452 P Sbjct: 586 DAQP 589 >UniRef50_A1AK55 Diguanylate cyclase with PAS/PAC sensor n=2 Tax=Desulfuromonadales RepID=A1AK55_PELPD Length = 301 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 5/187 (2%) Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCV 314 ++ L ++V + + + + + D LT ++NR + + L + P+ + Sbjct: 116 AITSLFLIVQDVTELATYEQKLIEMNTVDALTGVYNRRFLESRLKEECDRYGRYSRPFSL 175 Query: 315 MIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTER 374 M++DID FKKVNDT GH GD V+K V IR D LAR GGEEF LL + D + Sbjct: 176 MMIDIDFFKKVNDTHGHQGGDLVLKNVAAGAAAMIRKSDFLARYGGEEFCCLLPETDCDA 235 Query: 375 AKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKE 434 A+ +AE +R ++E + ++ +VTIS+G + +P + + AD ALY+AK Sbjct: 236 AETVAEHLRAHIENM--EHLFQKKVIRVTISLGIACFAPDD-SPETLVKRADEALYQAKR 292 Query: 435 TGRNKVV 441 +GRN+ V Sbjct: 293 SGRNRFV 299 >UniRef50_B5JWA7 Diguanylate cyclase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWA7_9GAMM Length = 394 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 93/392 (23%), Positives = 167/392 (42%), Gaps = 51/392 (13%) Query: 73 SNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALV 132 +L L + F I+++++ + L S V A+ L+ L +L F+A+ Sbjct: 29 RFILLGSLVLLAPLLFAISILVVLWVAPSFLNSQVAY---ALTTLYAAHVLVMLGFIAVA 85 Query: 133 NKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWK 192 K + +F + G A ++ S Y + + Sbjct: 86 LKKRHKQEDWPMFENFIV----------GSFTAVVMLSGYATGS---------------H 120 Query: 193 ASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAV------LYNISLLFMSRYSV 246 S +++F+ + + S + +R+ W VT + + L + LL S Y Sbjct: 121 FSEGLLLLFLGVNITSALAHVKKIRFLFWCVVTALVCLGINDLFGWLEHAPLLERSLYQP 180 Query: 247 ST-----WYISRTIEVV---SKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN 298 W++ + + + + + + ++ + + + ++ D LT + NR+ F Sbjct: 181 DGTPHILWWVVQAVMALILSALIYLCLLAVGRWVERENLYREMSTIDGLTRLTNRSSFIK 240 Query: 299 ELTVQSASAQKTP------YCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPD 352 + A Q+ P +++D+DHFK +NDTWGH GD+V+ I+ + R Sbjct: 241 RGDEELARLQRLPSDPSPTLACIMLDLDHFKSINDTWGHHAGDEVLVVASKIMMDNARQY 300 Query: 353 DLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQ 412 D + R GGEEF +LL +D A+ +AER+R+ + AI + T S+G Sbjct: 301 DEVGRYGGEEFAILLPSVDLALAEKIAERLRKKISEAVVKVDGKAI--QFTASLGVASFP 358 Query: 413 ENA-LNPNEIYRLADNALYEAKETGRNKVVVR 443 N N++ + AD ALYEAKE GRN+VV Sbjct: 359 SEGLENMNDLLKAADAALYEAKEGGRNQVVTA 390 >UniRef50_A8I8X7 GGDEF domain protein n=2 Tax=cellular organisms RepID=A8I8X7_AZOC5 Length = 510 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 9/196 (4%) Query: 255 IEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN--ELTVQSASAQKTPY 312 + ++ + M F + ++ D LT + NR +F + Q A+ Q++ Sbjct: 310 LLILGAAVALRREMLRRFEIEQEFLRLSQTDSLTGLPNRRHFDEFGQREWQRAARQRSSI 369 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDID 371 V+++DIDHFK+VND GHP GD+V++ V +II S+ RP D R GGEEF ++L + D Sbjct: 370 AVLMVDIDHFKQVNDRIGHPGGDRVLREVSDIIRASLHRPGDFAGRYGGEEFAIILPETD 429 Query: 372 TERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV-TQENALNPNEIYRLADNALY 430 A +AERIR +E T + VT+SIG E+ AD+ALY Sbjct: 430 APAAAHVAERIRAAIEANTAEG-----VAPVTVSIGLAAGLAAPKGTLAEMMIAADHALY 484 Query: 431 EAKETGRNKVVVRDVV 446 AKETGRN+VV V Sbjct: 485 RAKETGRNRVVSSHVA 500 >UniRef50_B8FHG3 Response regulator receiver modulated diguanylate cyclase n=6 Tax=Proteobacteria RepID=B8FHG3_DESAA Length = 319 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 4/185 (2%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT--PYCVMIMD 318 + + + + +A D LT I NR F L + A ++ ++++D Sbjct: 114 VKARIKTHIQLKRKSDLLDRLASIDGLTEIPNRRSFNAVLEREIRRAYRSGSSISLILLD 173 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKA 377 ID FKK ND +GH GD ++ V I + + R D+ AR GGEEFGV+L D D E A Sbjct: 174 IDLFKKYNDYYGHAAGDTCLRRVAKSIDRILNRASDIAARYGGEEFGVILPDTDLEGALH 233 Query: 378 LAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-PNEIYRLADNALYEAKETG 436 +AE IRE V L ++ ++ V++S+GA Q + P ++ AD ALY+AK++G Sbjct: 234 VAETIREAVASLNIEHAASSVADMVSVSLGAASLQPDVKTAPLDLINAADAALYQAKDSG 293 Query: 437 RNKVV 441 RNKV Sbjct: 294 RNKVC 298 >UniRef50_Q1JZ09 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ09_DESAC Length = 521 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 110/214 (51%), Gaps = 4/214 (1%) Query: 234 YNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNR 293 Y ++ ++ + S++ + +V + + ++ A + I+ RDPLT ++NR Sbjct: 308 YRLTDIWTQYKTQSSFVLVAMAIIVLLTCYLFVSRRKLYLAQQKLMRISERDPLTGLYNR 367 Query: 294 NYFFNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-R 350 F N + A KTP V+++DIDHFK ND +GH GD + V I I R Sbjct: 368 RKFMNYYEKEWKAAQRSKTPLAVLMIDIDHFKDYNDHYGHLAGDVALTAVAGAIETRITR 427 Query: 351 PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVV 410 P D AR GGEEF LL + D A +AE+IR VE+L + A +T+SIG Sbjct: 428 PRDCTARYGGEEFIGLLPETDDLAAAQVAEKIRIQVEKLQVQHAYSATADHITVSIGITS 487 Query: 411 TQENAL-NPNEIYRLADNALYEAKETGRNKVVVR 443 QE N E+ LAD ALYEAKE GRN V + Sbjct: 488 LQEGDKINRMELINLADKALYEAKEAGRNCVKIA 521 >UniRef50_B3QHH6 Diguanylate cyclase n=3 Tax=Rhodopseudomonas palustris RepID=B3QHH6_RHOPT Length = 379 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 12/305 (3%) Query: 138 NTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVT 197 + + + +L G + Y L + + W+A+ + Sbjct: 83 DRPLQTAAQATAVVAFALSVTAIGQFAPEPFAGRYMMAALFVIFAGTLVSALPWRATRI- 141 Query: 198 IMIFMWLTLLSVNLYFNGLRYD-IWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIE 256 + + L + +GLR+ W+ + ++ C V I+L R ++ E Sbjct: 142 --MTIAAAALYTLIVVSGLRWPPAWSNIDLVGLCLVTCVIALRARQRKD------AQIAE 193 Query: 257 VVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKT-PYCVM 315 + + + A ++ DPLT +FNR Y + ++AS + V+ Sbjct: 194 LQQIRRRDALLKQELRQANAALGRLSTTDPLTGVFNRRYLDELIEQETASLVPSLGQSVL 253 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 ++D+DHFK ND GH GD ++ +V + +++R D++ R GGEEF V+L +D Sbjct: 254 MIDVDHFKLFNDHGGHAAGDSCLQQIVTAVRRNLRSCDVVVRYGGEEFAVVLPGLDEAEL 313 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 + AER+ V L +P + VTIS+G A + + AD +LY AK Sbjct: 314 RETAERLCHAVSDLQIPHPGLGQGRVVTISVGIAP-PVPAETLADAIQRADQSLYRAKRA 372 Query: 436 GRNKV 440 GRN+V Sbjct: 373 GRNRV 377 >UniRef50_Q1JXK3 Diguanylate cyclase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXK3_DESAC Length = 475 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/161 (42%), Positives = 88/161 (54%), Gaps = 5/161 (3%) Query: 282 AHRDPLTNIFNRNYFFNE--LTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIK 339 A DPLT I NR Y + L ++ TP V++MDIDHFKKVNDT+GH VGDQV+ Sbjct: 312 ATTDPLTGIANRRYALEQAALEIKRNQRTGTPLSVVMMDIDHFKKVNDTYGHHVGDQVLM 371 Query: 340 TVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIP 399 V R DL++R GGEEF +LL + A+ AE+IR+ +E L+ E + Sbjct: 372 EVAQTCRSHCRESDLVSRFGGEEFLILLPSTNLNGAQTHAEKIRQAIEDLSFPTAEGNV- 430 Query: 400 QKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 VT S G Q + + AD ALY+AK GRN V Sbjct: 431 -SVTASFGVSQWQGETK-IDRVVSRADAALYQAKHDGRNCV 469 >UniRef50_A4TZM8 GGDEF domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZM8_9PROT Length = 578 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 3/185 (1%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASAQKTPYCVMIMD 318 + ++ + + R + +A D LT FNR +F ++ A+ P ++++D Sbjct: 390 VIGVLTDISDRKAMERELRRLATTDSLTGAFNRRHFLAAAGTELERANRYGNPLTLLMLD 449 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 +D+FK +ND GH GD ++ +V + ++R D++ R+GGEEF VLL + A Sbjct: 450 VDYFKSINDAHGHGTGDDALRRLVEGLRHALRDIDVIGRLGGEEFAVLLPETGMAGALIT 509 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 AER+R V L D P+ T+SIG + + + AD ALY AK+ GRN Sbjct: 510 AERLRAQVADLRLDLPDGG-QLAFTVSIGIAAPRAEDGSVEAVLARADKALYRAKDEGRN 568 Query: 439 KVVVR 443 +V Sbjct: 569 RVCAE 573 >UniRef50_A0LR80 Diguanylate cyclase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR80_ACIC1 Length = 710 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 4/204 (1%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL--TVQSASA 307 + + + + + ++ D LT ++N Y L ++ A+ Sbjct: 477 FTENDVRTLGTFAGQASVAIENVLLHQEAERLSLTDALTGLWNYRYLTMTLGHEIERATR 536 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 + P ++++D+D FK +ND GH GD V+ + + ++R D +AR GGEEF V+L Sbjct: 537 FRRPLALLMIDLDRFKDINDRHGHQAGDAVLVELARRLHTTVREVDTVARYGGEEFVVIL 596 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 + D + A AER+R+ V + IP VT SIG V + + + R AD Sbjct: 597 PETDADGAAHTAERLRQAVRGTPFHVEQMDIP--VTASIGIAVFPRHGSSAAILLRAADE 654 Query: 428 ALYEAKETGRNKVVVRDVVNFCES 451 ALY AK +GR+ + Sbjct: 655 ALYVAKHSGRDAWRFARAGGETPA 678 >UniRef50_A5V1I0 Diguanylate cyclase with GAF sensor n=2 Tax=Roseiflexus RepID=A5V1I0_ROSS1 Length = 681 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 5/228 (2%) Query: 225 TVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHR 284 ++A + + R S Y + L + + A Sbjct: 452 VLVAVMRRGGRVIGAILVRASRPYAYTDADCSALELLGATAAIAINNAHLFAEARRHATI 511 Query: 285 DPLTNIFNRNYFFNELTVQSASAQK--TPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT ++NR FF + + +Q+ P ++++D+DHFK VNDT+GH GDQV++ V Sbjct: 512 DELTGVWNRRTFFENVRREFQRSQRTLHPLAILMIDVDHFKSVNDTYGHAAGDQVLRGVA 571 Query: 343 NIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKV 402 +R D++ R GGEEF V L + D A +AER+R VER +I + Sbjct: 572 ERCRNQLRVIDIIGRYGGEEFAVALPETDIHAAGQIAERLRIAVERAPFVTDYGSI--SL 629 Query: 403 TISIGAVVTQENAL-NPNEIYRLADNALYEAKETGRNKVVVRDVVNFC 449 TIS+GA V + + + AD ALY AK +GRN V V Sbjct: 630 TISVGAAVYHPDDHVTLDAVIDRADRALYIAKRSGRNSVRVWSYPATT 677 >UniRef50_B7KCD2 Diguanylate cyclase with PAS/PAC and GAF sensors n=2 Tax=Cyanothece RepID=B7KCD2_CYAP7 Length = 960 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 4/215 (1%) Query: 229 FCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLT 288 + ++ + +++ ++ + S + +N+A D LT Sbjct: 740 WGLLIAHHCTSPRQWQPFEAELLTQLATQLAIAIQQSELHQQLQSTNQQLENLALIDQLT 799 Query: 289 NIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG 346 I NR F ++L + QK P +++ DID+FK+ NDT+GH GD + V + Sbjct: 800 QIPNRRCFDHDLERHWQNLARQKRPLSLLLCDIDYFKQYNDTYGHSGGDVCLTQVAQALK 859 Query: 347 KSIR-PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTIS 405 S R DL+AR GGEEF ++L D D A A+A+ I++ ++ L + + VT+S Sbjct: 860 ASARRASDLVARYGGEEFVIILPDTDNFGAIAVAQNIQKTLKELRLPHRASGVSSYVTVS 919 Query: 406 IGAVVTQENALNPN-EIYRLADNALYEAKETGRNK 439 IG + P+ E+ AD ALY+AK GR++ Sbjct: 920 IGIATLIPRSDLPSIELINAADQALYQAKAQGRDR 954 >UniRef50_B3PIC1 Sensory box/GGDEF family protein n=5 Tax=Gammaproteobacteria RepID=B3PIC1_CELJU Length = 322 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 109/195 (55%), Gaps = 4/195 (2%) Query: 251 ISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQ 308 + ++ +T + A + +N++ D LT++FNR Y+ L + Sbjct: 128 VDHICVIIYDVTDTAVNKIAQQHANKQLQNLSRTDHLTSLFNRGYWELRLIQEFKRYDRY 187 Query: 309 KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLT 368 ++P ++++DIDHFKK+ND +GH VGD+ I+ V +I + +R D+ R GGEEFG++LT Sbjct: 188 ESPSSLIMLDIDHFKKINDNYGHTVGDEAIRCVSRVIKEQVRDLDIAGRYGGEEFGIILT 247 Query: 369 DIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNA 428 + + A +AER+R +E+ T + I TIS+G ++ + + AD+A Sbjct: 248 STNGDGACVIAERLRSIIEKQTVYAEGHEI--HFTISLGVAELNDHMHDHRQWIEKADHA 305 Query: 429 LYEAKETGRNKVVVR 443 LY++KE+GRN+ + Sbjct: 306 LYKSKESGRNRCTLS 320 >UniRef50_B8JB86 Diguanylate cyclase n=4 Tax=Anaeromyxobacter RepID=B8JB86_ANAD2 Length = 764 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 4/196 (2%) Query: 250 YISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQS--ASA 307 Y ++ + +++ T+ +A D LT + N F L A Sbjct: 560 YGRDAVQQLLVISMHAAQSIDRARLFDQTERLATTDGLTGLTNHRTFQERLDAHLGQAQR 619 Query: 308 QKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLL 367 +++ DIDHFK VNDT+GHPVGDQV++ V + ++ R D++AR GGEEF +++ Sbjct: 620 YGKRTSLLLCDIDHFKSVNDTYGHPVGDQVLRGVARTLARAARGTDVVARYGGEEFAIVM 679 Query: 368 TDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADN 427 + DT A +AERIRE V +L + + P KVT+S+G ++ + AD Sbjct: 680 PETDTGGAMVIAERIREKVGQLVFETEQG--PLKVTLSLGVATFPDDGAQKPALIERADA 737 Query: 428 ALYEAKETGRNKVVVR 443 LY AK GRN+ V Sbjct: 738 CLYHAKRHGRNQSVSA 753 >UniRef50_Q0VMN2 GGDEF domain protein n=2 Tax=Alcanivorax RepID=Q0VMN2_ALCBS Length = 409 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 85/374 (22%), Positives = 151/374 (40%), Gaps = 28/374 (7%) Query: 91 TVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMT 150 + ++ +I + + + + +R + L V Q + + T Sbjct: 47 ALALVAFLIVSAMFIESRISVDVLSFSWRSRLFT--LMLTGGCLVLLRKPQWRNWLHEAT 104 Query: 151 LCISLFFVFGGPIVAHIL--SSHYESY---NLHIAELTNENGQVVWKASYVTIMIFMWLT 205 L ++ G + + S Y + L I + + A + ++ + Sbjct: 105 LVLAFAISLTGNYLGVTIEPSLSYPFFLHTPLAILMICILIRVPFYVALGSSAIMIACMI 164 Query: 206 LLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 G + +++ + ++ + +++S + + Sbjct: 165 --FSLQLNPGRYPFEPTTLVLVSLAFTCTGLFGQYVYERLLRQYFLSEHV--------LF 214 Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS-AQKTP-----YCVMIMDI 319 + SA V +N A D +T NR + L QKTP +++ DI Sbjct: 215 QHRNELHSANLVLENQATVDGMTGCINRRGMESRLNHLYHQLKQKTPDAPERITLILFDI 274 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNI---IGKSIRPDDLLARVGGEEFGVLLTDIDTERAK 376 D FK+ NDT+GHP GD+ +K V ++ + +S D +AR GGEEF + L D A Sbjct: 275 DFFKQYNDTYGHPAGDECLKKVASVPLGMVQS--DTDFVARYGGEEFVITLADSSFNDAL 332 Query: 377 ALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETG 436 AER+R VE+L + I Q VTIS+G + NA N ++ ++AD ALY+AK +G Sbjct: 333 VFAERMRNRVEQLGIPHSGSRISQVVTISVGVACSDSNAENGGQLLKMADEALYQAKGSG 392 Query: 437 RNKVVVRDVVNFCE 450 RN+V + E Sbjct: 393 RNRVALMSNQGVVE 406 >UniRef50_Q2BP76 GGDEF domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP76_9GAMM Length = 322 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 4/211 (1%) Query: 239 LFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN 298 + ++ + T + ++ +T V + A + + ++ D LT +FNR Y+ Sbjct: 114 ITLTPLTSPTGEVDHVGILIYDVTDNVTSQLELQQANKKLQALSREDRLTGLFNRGYWEE 173 Query: 299 ELTVQSASAQKTPYC--VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLA 356 L + ++ +++ DIDHFK+VNDT+GH GD+VI+ V + + + R D+L Sbjct: 174 CLNNEFERFNRSQMTSTLVMFDIDHFKRVNDTYGHQAGDEVIRVVADTLREQARKTDILG 233 Query: 357 RVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENAL 416 R GGEE+G +LT + E A AER+R +E L E+ + K TISIG Sbjct: 234 RYGGEEYGAILTGTNGENAMIFAERLRARIESLVVPYGEHQL--KFTISIGVSELTYEHD 291 Query: 417 NPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 +P E +D ALY++K++GRN V + Sbjct: 292 SPKEWLEQSDQALYKSKQSGRNWVTLFGESE 322 >UniRef50_Q47I66 Response regulator receiver modulated diguanylate cyclase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47I66_DECAR Length = 322 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 8/280 (2%) Query: 168 LSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVI 227 +++ L I + T + ++ A I + T+ + + + W + ++ Sbjct: 40 VATGEGEQALKIIQETWPSMVLLDDALQGIDGISLTRTIRTWEQSRDEAGFSPWTPIVLL 99 Query: 228 AFCA---VLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHR 284 + +L L + + V + + I + R K IA Sbjct: 100 SSVNDEDILAKGILAGADDFLYKPVSEVVLLAKVRAMLRIATRQQEICAVHRQLKEIAIL 159 Query: 285 DPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVV 342 D LT I NR +F + L + +TP ++I D+D FK+ ND +GH GD +K V Sbjct: 160 DSLTGIPNRRHFDDTLAAEWKRCIRTETPLSIVISDVDFFKQFNDIYGHQAGDVCLKAVA 219 Query: 343 NIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQK 401 + + +S+ R +D +AR GGEEF +L D A A+AER+R++ L + I + Sbjct: 220 SSLSESLFRVEDTVARYGGEEFVAILPGTDANGAYAVAERMRQSARDLCIPHERG-IDGR 278 Query: 402 VTISIGAV-VTQENALNPNEIYRLADNALYEAKETGRNKV 440 ++ S G P ++ R AD LY AK GRN+V Sbjct: 279 ISCSFGVASTCPSADKAPQQLLRTADAGLYAAKRAGRNRV 318 >UniRef50_A6GB67 Diguanylate cyclase (GGDEF domain) n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB67_9DELT Length = 752 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 5/235 (2%) Query: 208 SVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIF 267 SV ++ R+D V V+ + + + V Y E++ ++ V Sbjct: 514 SVAIFDKQTRFDQARSVLVLPLVRGEQVLGAITLISSRVKA-YPPAAREMLRVISHQVGV 572 Query: 268 MCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKV 325 + + A D LT + N F L + + +++ DIDHFK V Sbjct: 573 SMQNARMYQSMEERATTDGLTGLTNHRAFQERLEQLHALSERTGQKFSIILTDIDHFKSV 632 Query: 326 NDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIREN 385 NDT+GHPVGD V+K V I + R D++AR GGEEF ++L D D E A A R+RE Sbjct: 633 NDTYGHPVGDAVLKRVAAIFTRRARKVDIVARYGGEEFVLVLPDTDAEGAAVFANRLREE 692 Query: 386 VERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 + T + + VT+S+G ++ +E+ LAD ALY KE GRN+V Sbjct: 693 IAAQTITSDNGSF--SVTLSLGVAEFPRDSTKRHELIELADQALYYCKEHGRNRV 745 >UniRef50_C8WZ84 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ84_DESRD Length = 550 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 4/183 (2%) Query: 261 LTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTP--YCVMIMD 318 + MV + H K ++ D LT +FNR +F + + + A++T + ++D Sbjct: 357 VMAMVNDITHQQQYQEHLKRLSRTDELTGLFNRRHFITLMHKEFSRARRTHERLTLAMLD 416 Query: 319 IDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKAL 378 IDHFK VND +GH VGD V++ + I+ + +RP D+ AR GGEEF + D D +A + Sbjct: 417 IDHFKDVNDKYGHDVGDHVLQHLGRILREDVRPYDIAARYGGEEFAICFPDTDLSQADHI 476 Query: 379 AERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRN 438 ER+R I T+S G + + + + + ADNALY AK GRN Sbjct: 477 CERLRTLCAASEVSRNGGTIG--FTVSFGLSELRPEHEDLDGLLKSADNALYAAKANGRN 534 Query: 439 KVV 441 ++ Sbjct: 535 RIE 537 >UniRef50_Q4C2G9 GGDEF n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C2G9_CROWT Length = 373 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 4/205 (1%) Query: 239 LFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFN 298 L + + +T E+ + + A + +A DPL I NR F Sbjct: 163 LQELTRNQAKIIAEQTAELKEINAELKAANTKLKEANEELEQLAILDPLLPIANRRRFDE 222 Query: 299 ELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIR-PDDLL 355 L + A ++ +++ D+D+FK+ ND +GH GD+ + + I KS+R P DL+ Sbjct: 223 YLKQEWARMCRERRYLSLILADVDYFKQYNDKYGHQAGDRCLIAIAKTIQKSLRRPADLV 282 Query: 356 ARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVT-QEN 414 R GGEE ++L + + + A +AE I+E + L + I VTIS+G Sbjct: 283 CRYGGEELVIVLPNTNPDGAIKVAETIQEEIALLKIPHFRSKISDYVTISMGLASMIPIK 342 Query: 415 ALNPNEIYRLADNALYEAKETGRNK 439 ++P+ + +AD +LY+AK GRN Sbjct: 343 GVSPSMLINVADKSLYQAKNNGRNC 367 >UniRef50_C8QVV3 Diguanylate cyclase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVV3_9DELT Length = 519 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 10/258 (3%) Query: 198 IMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEV 257 ++IF LL + Y + + + I + Sbjct: 269 LLIFSQGGLLIGGGILVLVIYTLHGMIRSLDHLLAEIGQIGAEEDFGRRLPVAAGHEIGI 328 Query: 258 VSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYCVM 315 +++ ++ + + LR +A D LT + NR F L + ++ P ++ Sbjct: 329 IARHFNKLLEV--VERLLREKDQLAGTDQLTGLNNRRRFKELLDQELIRYRRIPKPLSLL 386 Query: 316 IMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERA 375 I DIDHFK+VNDT+GH GD V+K + ++ ++R D AR GGEEF VLL E A Sbjct: 387 IFDIDHFKRVNDTYGHETGDLVLKEMAQLLQATVRRTDTPARWGGEEFLVLLPATTAEAA 446 Query: 376 KALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKET 435 ALAE++R+ +E +VT S G + + + R D ALY+AK Sbjct: 447 MALAEKLRQAIEEHDFPR-----VGRVTASFGVAAFHDGEQEESALLRRVDKALYQAKRQ 501 Query: 436 GRNKVV-VRDVVNFCESP 452 GRN+VV + P Sbjct: 502 GRNRVVNWAAAAKPADLP 519 >UniRef50_C6BW86 Diguanylate cyclase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BW86_DESAD Length = 555 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 14/274 (5%) Query: 191 WKASYVTIMIFMWLTL---LSVNLYFNGLRYDIW--NGVTVIAFCAVLYNISLLFMSRYS 245 +K I F+W + L + + + +V ++ Sbjct: 280 YKEVMDPIYSFLWTAIGGAFLTLLIITPFSIKLIQSISIPLKRLSSVARQMTEGKFDCEC 339 Query: 246 VSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQ-- 303 T EV + + ++ + A D LT + NR Y E T Sbjct: 340 TGTGVSHPPEEVTQLIDGFCAMQGKVDRTVQELQKSAVTDQLTGLPNRRYLMKEGTRLVD 399 Query: 304 SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEF 363 A P +MIMDIDHFK +NDT+GH VGD V++ + + +R D++AR GGEEF Sbjct: 400 IAIRAGQPCSLMIMDIDHFKVINDTYGHTVGDIVLQQISKAFQEVVRSSDIIARYGGEEF 459 Query: 364 GVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENA----LNPN 419 V+ D + + LAER+R++VE +N E P TISIG + Sbjct: 460 VVVAPGSDIDSGRTLAERLRQSVEARIFNNDEQ--PLTCTISIGVSHYATDIKFGVDAYE 517 Query: 420 EIYRLADNALYEAKETGRNKVVVRDVVN-FCESP 452 ++ ADNALY+AK+TGRN++ + + N +SP Sbjct: 518 DMLARADNALYKAKDTGRNRICIAEPHNKLTDSP 551 >UniRef50_A8UY29 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY29_9AQUI Length = 336 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 4/221 (1%) Query: 226 VIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRD 285 ++A L + R S + +++ L + F+ + A D Sbjct: 115 LVAILGDKEPFGSLSVGRVMSSKPFTEEDGKILRSLAFIFSFIVKEELEKKRLLEKAIID 174 Query: 286 PLTNIFNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVN 343 LT ++NR Y + A P +++ D+D+FK+VNDT+GH VGD+V+ + Sbjct: 175 HLTGLYNRFYLEEAGAREIARAKRYGFPISLIMFDLDNFKQVNDTYGHQVGDRVLVKFAS 234 Query: 344 IIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVT 403 I+ ++R D+ R GGEEF VLL E A +AERIRE E+ ++T Sbjct: 235 IVSSNVRSTDMPVRYGGEEFVVLLPHTYPEEAVKVAERIREEFEKFLFRFEGE--VMRLT 292 Query: 404 ISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 +S G + E+ ++AD A+YEAKE G+N++ V Sbjct: 293 VSAGISFCNSGECSLGELIQMADKAMYEAKEKGKNRIEVFS 333 >UniRef50_Q2SNU2 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNU2_HAHCH Length = 367 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 75/333 (22%), Positives = 134/333 (40%), Gaps = 14/333 (4%) Query: 120 QMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHI 179 + + + ++ V + + + ++++ + + + + Sbjct: 25 SVIKALAYAASFMSFVIGVKSWLWTHTAHASALFLFCALMLMNVISYNRTLNQQLFKTLF 84 Query: 180 AELTNENGQVVWKASYVTIMIFMWLTLLS-VNLYFNGLRYDIWNGVTVIAFCAVLYNISL 238 L + + +W + Y GLR W + ++A A+++ Sbjct: 85 LWLVGLLFLYLIAGGGESNTGILWFYVFPPFVFYVAGLRTGSWMLIIMVALIAIIFRFPE 144 Query: 239 LFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRV--------TKNIAHRDPLTNI 290 L R + + R VS ++V M H R + A D LT + Sbjct: 145 LPWVRTVYNLDFQLRFAATVSFVSVFAFVMDHSRRKARQELINMARLYEKAARTDELTQL 204 Query: 291 FNRNYFFNELTVQ--SASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKS 348 NR +L + + + V+++DIDHFK +NDT+GH GD V+ + ++ + Sbjct: 205 PNRRDMQQQLEKEYFRYKRHGSHFSVILLDIDHFKMINDTYGHDAGDFVLMKISELLVNA 264 Query: 349 IRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA 408 R D+ AR GGEEF + L D +A LAER+R+++E I + TIS G Sbjct: 265 CRKMDMAARWGGEEFLIQLPDTSLVQALTLAERLRKSIEASPLQYKNQEI--RYTISCGV 322 Query: 409 VVTQENALNPNEIYRLADNALYEAKETGRNKVV 441 A + + + AD LY+AK GRN V+ Sbjct: 323 CSI-SQAKDLASLLKQADVNLYQAKIKGRNMVI 354 >UniRef50_Q31LE3 Diguanylate cyclase with GAF sensor n=2 Tax=Synechococcus elongatus RepID=Q31LE3_SYNE7 Length = 664 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 6/242 (2%) Query: 208 SVNLYFNGLRYDIWNGVTV--IAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 + L LR + + I + ++ + + + + V Sbjct: 415 ATLLKRLQLRASLVAPIFAQEILWGLLIVGQNSQPRRWEKLEIDLLKQLATQVGIAIQQA 474 Query: 266 IFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFK 323 + +A + +A D LT + NR +F L ++ ++ P ++++DID FK Sbjct: 475 RLYAQLAAANQQLLRLAQSDGLTGLANRRHFDQCLDIEWQRAIREQHPLGLILIDIDCFK 534 Query: 324 KVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERI 382 + NDT+GH GD +K V + + I RP DL+AR GGEEF V+L + + + +AE + Sbjct: 535 QFNDTYGHQAGDDCLKAVATALTQVIARPADLVARYGGEEFVVILPNTNEQGILQIAESM 594 Query: 383 RENVERLTGDNPEYAIPQKVTISIGAVVT-QENALNPNEIYRLADNALYEAKETGRNKVV 441 R V++L + ++ V++S+GAV +P + AD ALY+AKE GRN+V Sbjct: 595 RSAVQQLKIPHRSSSVCSSVSLSLGAVTWVPTPHKSPEALIAAADQALYQAKELGRNRVC 654 Query: 442 VR 443 + Sbjct: 655 LA 656 >UniRef50_Q6ARI2 Probable sensory transduction system regulatory protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ARI2_DESPS Length = 449 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 7/236 (2%) Query: 216 LRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSAL 275 L + + ++ + L R + + + + + A Sbjct: 214 LSHGLIWLSGLLLIYFGGRRVMLSTEERNQANKELLRHKQHLE---IKIRQRTAELTEAN 270 Query: 276 RVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPV 333 + ++I+ D LT I NR +F N + + + +KTP ++++DID+FK ND +GHP Sbjct: 271 QKLEHISLTDGLTGIANRRHFDNLIAKEWSRAIREKTPITLIMIDIDYFKLFNDLYGHPE 330 Query: 334 GDQVIKTVVNIIGKSIR-PDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGD 392 GD +KTV + +R D +AR GGEEF +L + A +AE++R ++ +L + Sbjct: 331 GDICLKTVAMALNAEMRRSTDFVARYGGEEFAAILPNTGGPGALVMAEKMRASIAKLEIE 390 Query: 393 NPEYAIPQKVTISIG-AVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVN 447 + + I +TIS+G V + + + AD ALY AK GRN+ Sbjct: 391 HKDSEINNYLTISLGAISVVPKKGSDFSHFIEQADKALYTAKTEGRNQARAFSPDG 446 >UniRef50_C1DFX7 Transmembrane protein with C-terminal GGDEF motif n=1 Tax=Azotobacter vinelandii DJ RepID=C1DFX7_AZOVD Length = 529 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 13/277 (4%) Query: 178 HIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNIS 237 +A+ + + I+ L + + + L I + +A A + S Sbjct: 262 VVAQRPSAATLAALDGLMLEILFDALLFFVPLLVAIWWLSKLIARPLRQLAITARHWEFS 321 Query: 238 LLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFF 297 V +WY ++ L + + + + PLT + NR Sbjct: 322 TAQEQIRRVHSWYFEAEQLKLAMLGGLALLHGKLGRLNQE----NITAPLTGLVNRRG-- 375 Query: 298 NELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 + ++ Q+ P+ V+++DIDHFK+VND GH VGDQV++ V +++ R DL+ R Sbjct: 376 QQFALERWQEQQQPFAVIVLDIDHFKQVNDNHGHDVGDQVLQHVSHLMDSVSRSSDLVCR 435 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN 417 GGEEF +LL + E A +AER+R + + + VTIS G +A + Sbjct: 436 SGGEEFVLLLPETGLEAATQVAERLRGLIS-----HTQTPTGSFVTISTGVAHWPGSASS 490 Query: 418 PNEIYRLADNALYEAKETGRNKVVVR--DVVNFCESP 452 + +LAD ALY AK GRN+VVV + ++P Sbjct: 491 VPAVLKLADEALYRAKRNGRNRVVVAGQREIGSEDAP 527 >UniRef50_Q4KF29 GGDEF domain protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KF29_PSEF5 Length = 523 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%) Query: 228 AFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPL 287 A I L + + W + + ++ + A + IA D L Sbjct: 297 ASAYQSTAIVALVLLGVGLFGWVFVQQVRNNERIEA------DLREAQEALEVIATHDSL 350 Query: 288 TNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNII 345 T + NR F LTV+ Q++P ++++DID+FK+ NDT+GH GD + V + Sbjct: 351 TGLANRRLFERALTVEFGRGARQRSPLSLVMVDIDYFKRYNDTYGHVAGDHCLTEVAQAL 410 Query: 346 GKSI-RPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTI 404 R DL R GGEEF VLL D D A A+AE+IR +V + + + VT+ Sbjct: 411 KGCCQRKADLAVRYGGEEFAVLLPDTDIHGALAMAEQIRRSVMQRNIAHSGSPVG-CVTV 469 Query: 405 SIGA-VVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP 452 S+G + AD ALY+AK TGRN+ + + P Sbjct: 470 SLGCYAFVPTGRDSIEMFIERADAALYQAKATGRNR-AMALAADHVGEP 517 >UniRef50_C0Z6I5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6I5_BREBN Length = 530 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 9/194 (4%) Query: 253 RTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPY 312 R E++S+ + + +I + A DPLT + NR + A ++ P+ Sbjct: 346 REAELLSR--AIRFALTNIKKKTEQLTHDARTDPLTGLTNRRTLEETMQKWMA--EQIPF 401 Query: 313 CVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDT 372 +M+MD+D FK +NDT+GH GD+V++ II S+RP+D+ R GGEEF VL++ Sbjct: 402 SIMMMDLDRFKAINDTYGHQAGDEVLRHFAKIISSSLRPEDVSCRFGGEEFVVLVSHTGL 461 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEA 432 E A +AERIR +E I Q++T+S G +A++P + +AD A+Y+A Sbjct: 462 EEAYQVAERIRRALE-----TRTNPIGQRLTVSQGIAHYPSHAVSPEGLLHVADEAMYKA 516 Query: 433 KETGRNKVVVRDVV 446 K GRN+ ++ + Sbjct: 517 KRAGRNQTMIAEEE 530 >UniRef50_A1U2H0 Diguanylate cyclase n=2 Tax=Marinobacter RepID=A1U2H0_MARAV Length = 630 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 86/431 (19%), Positives = 153/431 (35%), Gaps = 44/431 (10%) Query: 53 IDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDI 112 + + + L I V +FL + Y + + + + Sbjct: 190 LFEGIYYGIVLVMILYNLFVFMAVGERSFLYYVGYIAA-MPLFLASLHGVTFQYLWPEAT 248 Query: 113 A------IYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAH 166 I +L + + ++ +N N ++ M + + + G I Sbjct: 249 WWNDQSIIVFLNLVVLFGGAFSIRFISVTRQNHPWLNRWTWAMIMTAGMLALAGLLIPYQ 308 Query: 167 ILSSHYESYNLHIAELTNENGQVVW-------KASYVTIMIFMWLTLLSVNLYFNGLRYD 219 L V W + V + ++ ++ F L + Sbjct: 309 WLILPSILVAFVGCSTMLMLSVVRWIKKDPAARYYTVAWVFMLFGGIVLALSKFTMLPRN 368 Query: 220 IWN--------GVTVIAFCAVL-----------YNISLLFMSRYSVSTWYISRTIEVVSK 260 + + VI L + + + +++ + + Sbjct: 369 LLTENATQVGSALGVILLSIALADRLNREKKKSFAAQQKLLREERKARLAQEKSLRIQQE 428 Query: 261 LTVMVIFMCH-----IFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQK--TPYC 313 ++ + ++ DPLT + NR +F + A + Sbjct: 429 ANALLEERVQERTRDLEILNEQLLELSATDPLTGLKNRGHFDKKFQSDVVHAYRFEETLS 488 Query: 314 VMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSI-RPDDLLARVGGEEFGVLLTDIDT 372 ++I+DIDHFK NDT+GH VGD +K V + I + + RP DL AR GGEEF VLL D Sbjct: 489 LLIVDIDHFKGFNDTYGHLVGDDCLKMVADCIKQHVTRPQDLAARYGGEEFVVLLPDTPE 548 Query: 373 ERAKALAERIRENVERLTGDNPEYAIPQKVTISIGA-VVTQENALNPNEIYRLADNALYE 431 A +AE IRE+++++ + + +T+SIG A ++ AD ALY Sbjct: 549 AGACRVAELIREDIQKMAFRVSDQVL--HLTVSIGVCSCAPSQADATKALFACADGALYR 606 Query: 432 AKETGRNKVVV 442 AK GRN+VV Sbjct: 607 AKAEGRNRVVA 617 >UniRef50_Q2SP63 Response regulator containing a CheY-like receiver domain and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SP63_HAHCH Length = 584 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 81/386 (20%), Positives = 157/386 (40%), Gaps = 12/386 (3%) Query: 66 IYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCI 125 + +R + L+ + + + + ++ Y+ L Sbjct: 186 LLERIGKEQLAYGAYYGGFLVLVIYNFFMFIAVRDRTFAHYLLYVTSYGLYMAVHNGLTF 245 Query: 126 LIFLALVNKVSENTKQRNLFSKKM-TLCISLFFVFGGPIVAHI-LSSHYESYNLHIAELT 183 + ++ L + L + + I ++ + + I+ Sbjct: 246 QFLWPNFPWFANHSLLILLILSLLGALQFARSILVTQQIAPRTDFAARVLEWLMLISLAC 305 Query: 184 NENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSR 243 ++++ F+ L + + + A+ A+L + + Sbjct: 306 TPFFTYHTMIVPISLLTFVIAAQLLLMGVLALMAGSRPARYYMTAWTALLIGVLAYMLKT 365 Query: 244 YSV-STWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTV 302 + + +++ + LT MV+ + S + + + D LT +FNR +F ++ Sbjct: 366 FGLLPHNVLTQNGFQIGSLTEMVLLSLALSSRVNELQRKTYTDALTGLFNRRHFDDKFAT 425 Query: 303 QSASAQ--KTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG 360 + AQ K P ++++DID FK+ NDT+GH VGD +K V I+ K +R + R GG Sbjct: 426 EFHRAQQSKQPLTLLVIDIDCFKQFNDTYGHNVGDHALKEVARILAKGVRKPNCPCRYGG 485 Query: 361 EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN-PN 419 EEF V+L + D + A +LA R+R VE E K++IS+G + + PN Sbjct: 486 EEFAVILPNTDHDAAMSLANRLRVKVEE------ETESGYKLSISVGVASMAHDEFDCPN 539 Query: 420 EIYRLADNALYEAKETGRNKVVVRDV 445 +++ AD ALY AK+ GRN+V+ Sbjct: 540 KLFERADYALYTAKQQGRNRVIDYRS 565 >UniRef50_A6VYW5 Diguanylate cyclase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYW5_MARMS Length = 714 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 93/458 (20%), Positives = 193/458 (42%), Gaps = 38/458 (8%) Query: 17 LFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCV 76 + L L + S F + ++ P + ++ +L + +V +F +R + + Sbjct: 264 VVFLLLAAIGSVFGLIHLTQLYPAFDGMFIVTSLLLVGSVLLVF-------NRVRLEQKL 316 Query: 77 LSLAFLSCLIYFVITVIIIQQIIEERLTS----SVVQNDIAIYYLFRQMSL----CILIF 128 L LA+ ++ + + I +++ + I F + Sbjct: 317 LILAYFVFCSVMMLDMAVAHNWISWSSVPVSSGALLFSVAIIGLSFNHYLSTQRRLAKLN 376 Query: 129 LALVNKVSENTKQRNLFSKKMTLCI--SLFFVFGGPIVAHIL----SSHYESYNLHIAEL 182 ++L +KV E T+Q ++ +K+ L LF IV+ I+ S H + Sbjct: 377 ISLESKVIERTEQLSIMAKQEALRANGLLFQQEKIEIVSDIIFELESCHTLEVGIEKIAN 436 Query: 183 TNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYD--------------IWNGVTVIA 228 + E + + + W + S + + ++ V Sbjct: 437 SIEALCAPFSGVFSIAVTDEWRNVHSWGQIIDSTPTENAAFTKAKFNNEQGVFPFRVVNQ 496 Query: 229 FCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLT 288 +V Y L + ++ + I+ ++++ + + + + ++ D LT Sbjct: 497 QGSVRYVALLQVQATEGLNGYPIAHFMKLLKRAIEKINITLANIALREELQRFSYEDELT 556 Query: 289 NIFNRNYFFNELTVQS--ASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIG 346 + NR +F + + A + P ++I DID+FK NDT+GHP GD+ +KT+ +++ Sbjct: 557 GLKNRRFFSEVMEHEITAAEQNQEPLSLLICDIDYFKTFNDTYGHPAGDEALKTLASLLS 616 Query: 347 KSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISI 406 +++ R+GGEEF V++ + E AE +R VE+ + + + + +TISI Sbjct: 617 PFFYEGNIVCRLGGEEFVVVMPRVKREDCLRKAEELRAAVEKTQIEYEGHLL-ENITISI 675 Query: 407 GAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRD 444 G E +P ++++ D+ALY+AKE+GRN + V + Sbjct: 676 GISSWPELISDPRQLFQQTDSALYQAKESGRNCIRVTE 713 >UniRef50_C4KD29 Response regulator receiver modulated diguanylate cyclase n=2 Tax=Betaproteobacteria RepID=C4KD29_THASP Length = 634 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 100/205 (48%), Gaps = 4/205 (1%) Query: 240 FMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNE 299 +R + Y+ + F + + R + A D LTN+ NR N Sbjct: 422 LRARLRAARHYVQLLEAWERDRAQLKQFAAELAISNRRLAHAAMTDLLTNLPNRRSGMNA 481 Query: 300 LTVQSA--SAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLAR 357 L A S + P VM++DIDHFK++ND+ GH VGD V++ V I +S R DD + R Sbjct: 482 LAKAWAASSRFEQPLSVMMLDIDHFKRINDSHGHAVGDTVLRDVAQAIQQSARKDDSMCR 541 Query: 358 VGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALN 417 +GGEEF V+ + D + A AER+R VERL E I V SIG + Sbjct: 542 MGGEEFLVICPNTDLKAAVQAAERLRRMVERLRIQAGETEIQTSV--SIGVATREVGMTE 599 Query: 418 PNEIYRLADNALYEAKETGRNKVVV 442 + + AD ALY AK+ GRN+ V Sbjct: 600 TDALVNAADRALYRAKQAGRNRSCV 624 >UniRef50_Q47X90 GGDEF domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47X90_COLP3 Length = 364 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 150/362 (41%), Gaps = 25/362 (6%) Query: 89 VITVIIIQQIIEERLTSSVVQNDIAIYYLF-RQMSLCILIFLALVNKVSENTKQRNLFSK 147 +I ++I+ + + ++++F +++ + K + Sbjct: 20 MIAMLIVSSAYFWIFIKFIPFEILVVWFVFQMFLAMYRFYNAIMFKKHLAQKAHEKIEKN 79 Query: 148 KMTLCISLFFVFGGPIVAHILSS-----HYESYNLHIAELTNENGQVVWKASYVTIMIFM 202 ++ +S F ++ +LS YE +L + + + Y ++F Sbjct: 80 ELYFMLSNVFQAAMWTISSVLSIVYAPQPYELVSLIMIIGIITAAALSMSSLYKAYLLFF 139 Query: 203 WLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLT 262 + ++ + G+ V+ F + I L S Sbjct: 140 FSMIIPQIIIMISFGEHQHIGLVVLIFIYIPATILLSRAIYNSR---------------L 184 Query: 263 VMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSAS--AQKTPYCVMIMDID 320 V + ++ ++ D LTNI+NR YFF A+ ++ P ++++DID Sbjct: 185 SSVEANDSLEKSVNELHRLSIMDNLTNIYNRRYFFEMSKKLIATAFREQKPVSLIMLDID 244 Query: 321 HFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAE 380 FK+VND +GH GD ++ +V + K +R D+ AR+GGEEF +LL + E AK +AE Sbjct: 245 LFKRVNDNYGHQAGDCILIDLVKELEKVMRKSDVFARIGGEEFTILLNNTSLEGAKVIAE 304 Query: 381 RIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV 440 ++R +E +I +TISIG + ++Y+ AD LY AK GRN+V Sbjct: 305 KMRLTIENKVFIYNTTSID--ITISIGVSELNTENTSIEDLYKQADKQLYRAKHKGRNRV 362 Query: 441 VV 442 Sbjct: 363 CT 364 >UniRef50_Q31GR6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GR6_THICR Length = 566 Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 86/424 (20%), Positives = 174/424 (41%), Gaps = 32/424 (7%) Query: 28 WFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIY 87 ++ Y + FI + + +FI + L + + + Sbjct: 165 IVPISILDTESLFKNYTSIFATSMFIYGIIIAMILYHFIL------FASIQLRYYAYYVL 218 Query: 88 FVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSK 147 ++ + + + ++Q+ I Q + L +A + + Sbjct: 219 YLTSFLAMNVSYNGYTFQFLLQDFPVIQNWI-QATTIFLFAIAGLLFAKAFLNLKRYIPL 277 Query: 148 KMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLL 207 TL ++ +VF ++ + + V A ++++ +++ + Sbjct: 278 AHTLTKAMIWVFV---------------SVMVISALFGYHEHVMFAIGMSVLFSLFVFTI 322 Query: 208 SVNLYFNGLRYDIWNGVTVIA--FCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMV 265 ++ Y G + + + A + ++++ + YS + + + + Sbjct: 323 ALLSYLKGNKTARFFLLGTTAGLIGTSVTALTVMAIIPYSHLGYQAVDYGLAIDSILLSF 382 Query: 266 IFMCHIFSALR---VTKNIAHRDPLTNIFNRNYFF---NELTVQSASAQKTPYCVMIMDI 319 + + S + + A+ D LTN+ NR F L S + + +++DI Sbjct: 383 ALVDRVKSTEKDKLQAEASANTDALTNVANRRAFNHFCEHLAFDSQNFYQGKLVALMLDI 442 Query: 320 DHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALA 379 D FK++ND++GH VGD V++ V +++ + + D + R+GGEEF VLL D + E A+ +A Sbjct: 443 DFFKEINDSFGHSVGDIVLQKVASLLRNNTKSADKIFRMGGEEFLVLLLDTELEDAQKVA 502 Query: 380 ERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNK 439 ERIR +E + I +T+SIG ++ +LAD ALYEAK +GRNK Sbjct: 503 ERIRAAIEEMETHKENKTI--SITVSIGMADFLPEDVSLLSTIQLADKALYEAKRSGRNK 560 Query: 440 VVVR 443 VV+ Sbjct: 561 VVLA 564 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.317 0.146 0.468 Lambda K H 0.267 0.0445 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,553,126,113 Number of Sequences: 3077464 Number of extensions: 144149387 Number of successful extensions: 670714 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23286 Number of HSP's successfully gapped in prelim test: 6397 Number of HSP's that attempted gapping in prelim test: 587151 Number of HSP's gapped (non-prelim): 37293 length of query: 452 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 320 effective length of database: 634,171,108 effective search space: 202934754560 effective search space used: 202934754560 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 95 (41.1 bits)