Phyre 2 alignment of P76137 with c2ezvA_

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Job Description | P76137
Confidence | 4.22% | Date | Wed Jan 25 15:21:05 GMT 2012
Rank | 73 | Aligned Residues | 49
% Identity | 22% | Template | c2ezvA_
PDB info | PDB header:hydrolase/dna | Chain: A: PDB Molecule:type ii restriction enzyme sfii; | PDBTitle: crystal structure of tetrameric restriction endonuclease2 sfii bound to cognate dna.
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | E | N | R | V | A | L | N | A | N | S | L | A | D | N | V | E | L | D | E | T | V | V | T | V | I | P | T | H | G | A | I | A | R | A | T | F | N | A | Q | I | G | G | K | V | L | M | T | L | K | Y | G | N | K | S | V | P | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | N | R | D | T | L | Q | R | S | Q | L | P | M | D | A | E | F | R | N | T | S | S | G | E | V | V | T | M | E | A | G | V | I | P | H | . | . | . | . | . | . | . | . | . | L | M | L | Q | S | A | N | D | G | V | L | P | A
Template Known Secondary structure |  |  | S | S |  |  |  |  |  | G | G | G |  |  | S |  |  |  |  |  |  | T | T | T |  | S |  |  |  |  |  |  |  | S |  | S |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  | S | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 150 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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