BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (875 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P18004 Protein traC n=51 Tax=root RepID=TRAC_ECOLI 1821 0.0 UniRef50_B6ICF6 TraC protein n=1 Tax=Escherichia coli SE11 RepID... 799 0.0 UniRef50_D2TZZ8 Conjugal transfer ATP-binding protein TraC n=1 T... 739 0.0 UniRef50_A4WGS7 Type IV secretory pathway VirB4 components-like ... 729 0.0 UniRef50_D1RMN8 Type-IV secretion system protein TraC n=2 Tax=Le... 405 e-111 UniRef50_A8QYQ2 TraC protein n=2 Tax=Legionellaceae RepID=A8QYQ2... 395 e-108 UniRef50_B6ESX9 Conjugative transfer protein TraC n=14 Tax=Vibri... 337 1e-90 UniRef50_Q5ZTS4 TraC n=1 Tax=Legionella pneumophila subsp. pneum... 280 2e-73 UniRef50_B8EFP1 Type-IV secretion system protein TraC n=6 Tax=Sh... 275 5e-72 UniRef50_Q1MY39 ATPase n=1 Tax=Bermanella marisrubri RepID=Q1MY3... 263 2e-68 UniRef50_Q0F363 Putative uncharacterized protein n=1 Tax=Maripro... 246 3e-63 UniRef50_A0B4N6 Putative uncharacterized protein n=1 Tax=Burkhol... 245 7e-63 UniRef50_A1WDF4 Putative uncharacterized protein n=3 Tax=Burkhol... 237 1e-60 UniRef50_A3VN21 TraC n=1 Tax=Parvularcula bermudensis HTCC2503 R... 235 5e-60 UniRef50_D0SGY4 Type IV secretory pathway protein n=1 Tax=Acinet... 235 7e-60 UniRef50_C5ANL2 Putative uncharacterized protein n=2 Tax=Burkhol... 226 2e-57 UniRef50_A4XE86 Type IV secretion/conjugal transfer ATPase, VirB... 221 7e-56 UniRef50_D0Z4T2 IncF plasmid conjugative transfer pilus assembly... 218 6e-55 UniRef50_B2I3Z2 Type IV secretory pathway, VirB4 component n=1 T... 216 3e-54 UniRef50_Q1N8Z9 ATPase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8... 212 4e-53 UniRef50_Q1RJF1 Conjugative transfer protein TraC n=35 Tax=Ricke... 210 2e-52 UniRef50_Q3IUW4 TraC n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 199 4e-49 UniRef50_C5T9V4 Type-IV secretion system protein TraC n=5 Tax=Be... 199 6e-49 UniRef50_C5SIK7 Type-IV secretion system protein TraC n=1 Tax=As... 196 2e-48 UniRef50_B4RLR8 TraC n=10 Tax=Neisseria RepID=B4RLR8_NEIG2 196 5e-48 UniRef50_Q6MB95 Putative inner-membrane protein traC n=1 Tax=Can... 174 1e-41 UniRef50_C4NVU8 TraC n=29 Tax=Gammaproteobacteria RepID=C4NVU8_E... 174 1e-41 UniRef50_Q8L274 Pilus biogenesis protein n=5 Tax=Gammaproteobact... 174 2e-41 UniRef50_Q2LTZ9 Sex pilus assembly protein n=3 Tax=Deltaproteoba... 162 4e-38 UniRef50_B7XGR7 Putative pilus assembly protein n=2 Tax=Pseudomo... 158 7e-37 UniRef50_Q4HPB0 Conjugative transposon protein TraG, putative n=... 150 2e-34 UniRef50_A4JTN9 Sex pilus assembly protein n=2 Tax=Burkholderial... 142 5e-32 UniRef50_Q5NX56 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 142 8e-32 UniRef50_Q19NS3 TrhC n=11 Tax=Enterobacteriaceae RepID=Q19NS3_ECOK1 138 9e-31 UniRef50_C4Z002 Putative inner-membrane protein TraC n=1 Tax=Ric... 130 3e-28 UniRef50_A0R7Q8 Sex pilus assembly protein n=1 Tax=Pelobacter pr... 129 7e-28 UniRef50_C0QUW6 Type-IV secretion system protein TraC n=1 Tax=Pe... 124 2e-26 UniRef50_B7J837 Type-IV secretion system protein TraC n=1 Tax=Ac... 119 5e-25 UniRef50_A9AU11 Type IV secretion system protein n=1 Tax=Burkhol... 99 7e-19 UniRef50_B0RL05 Type IV secretory pathway VirB4 component n=2 Ta... 98 1e-18 UniRef50_A0L303 Type IV secretory pathway VirB4 components-like ... 91 3e-16 UniRef50_Q2IEL2 Type IV secretory pathway VirB4 components-like ... 82 1e-13 UniRef50_Q1NGT3 Sex pilus assembly protein n=1 Tax=Sphingomonas ... 81 2e-13 UniRef50_A6EBE8 Conserved protein found in conjugate transposon ... 80 2e-13 UniRef50_B0KAW2 Type IV secretory pathway VirB4 components-like ... 77 3e-12 UniRef50_A5KS14 Type IV secretory pathway VirB4 components-like ... 75 9e-12 UniRef50_C2FTT8 Conjugative transposon protein TraG n=1 Tax=Sphi... 74 2e-11 UniRef50_A6L0N6 Conserved protein found in conjugate transposon ... 74 2e-11 UniRef50_B0K833 Type IV secretory pathway VirB4 components-like ... 71 2e-10 UniRef50_B7ABM5 Type IV secretory pathway VirB4 component, ATPas... 70 3e-10 UniRef50_C1XZE7 Putative uncharacterized protein n=1 Tax=Meiothe... 69 5e-10 UniRef50_C1SHE1 Putative uncharacterized protein n=1 Tax=Denitro... 69 7e-10 UniRef50_A5FFJ6 Bacteroides conjugative transposon TraG-like pro... 69 8e-10 UniRef50_A0M144 TraG-like protein n=3 Tax=Flavobacteriaceae RepI... 69 1e-09 UniRef50_A4J314 Putative uncharacterized protein n=1 Tax=Desulfo... 69 1e-09 UniRef50_C4XEH5 Putative uncharacterized protein n=1 Tax=Mycopla... 68 1e-09 UniRef50_C5J6G0 TRSE-like protein n=1 Tax=Mycoplasma conjunctiva... 67 3e-09 UniRef50_Q2SSU5 Membrane bound ATPase, putative n=1 Tax=Mycoplas... 65 9e-09 UniRef50_C8WY82 Type IV secretory pathway VirB4 protein-like pro... 65 9e-09 UniRef50_C4G4W2 Putative uncharacterized protein n=1 Tax=Abiotro... 65 2e-08 UniRef50_Q84BZ8 Putative membrane-bound ATPase n=2 Tax=Spiroplas... 64 2e-08 UniRef50_C6I0M0 Putative uncharacterized protein n=1 Tax=Leptosp... 63 4e-08 UniRef50_UPI0001713796 hypothetical protein Aasi_0876 n=1 Tax=Ca... 63 6e-08 UniRef50_Q120F2 Type IV secretory pathway VirB4 components-like ... 61 2e-07 UniRef50_A4V6R2 Putative uncharacterized protein n=1 Tax=Pseudom... 60 3e-07 UniRef50_Q98QH8 TRSE-LIKE PROTEIN n=1 Tax=Mycoplasma pulmonis Re... 60 4e-07 UniRef50_C9RCA0 AAA ATPase n=1 Tax=Ammonifex degensii KC4 RepID=... 60 4e-07 UniRef50_B2TS95 Putative uncharacterized protein n=8 Tax=Clostri... 59 1e-06 UniRef50_D2QVN3 Type IV secretory pathway VirB4 protein-like pro... 59 1e-06 UniRef50_C3N6R5 AAA ATPase n=8 Tax=Sulfolobaceae RepID=C3N6R5_SULIY 59 1e-06 UniRef50_A6NYK4 Putative uncharacterized protein n=1 Tax=Bactero... 58 2e-06 UniRef50_Q2NC54 Type IV secretion system protein B4, putative n=... 58 2e-06 UniRef50_A8ZR82 Type IV secretory pathway VirB4 component, ATPas... 58 2e-06 UniRef50_C3CTH0 Type IV secretory pathway VirB4 component-like p... 58 2e-06 UniRef50_Q6MU50 Transfer complex protein TrsE n=2 Tax=Mycoplasma... 56 7e-06 UniRef50_Q4A7V5 TRSE-like protein n=2 Tax=Mycoplasma hyopneumoni... 56 7e-06 UniRef50_B3DVA0 Type IV secretory pathway, VirB4 component n=1 T... 55 2e-05 UniRef50_B0T8Q5 Putative conjugal transfer protein TrbE n=2 Tax=... 54 2e-05 UniRef50_C9LWN3 Putative conjugal transfer protein TrbE part 2 n... 54 3e-05 UniRef50_A4XMV0 AAA ATPase n=2 Tax=Caldicellulosiruptor saccharo... 54 4e-05 UniRef50_B9MP37 AAA ATPase n=1 Tax=Anaerocellum thermophilum DSM... 53 4e-05 UniRef50_Q601R8 Transfer complex protein n=7 Tax=Mycoplasma RepI... 53 5e-05 UniRef50_C7LKR7 Putative membrane protein n=3 Tax=Mycoplasma Rep... 52 9e-05 UniRef50_B6A599 Type IV secretion/conjugal transfer ATPase, VirB... 52 9e-05 UniRef50_C3WQT8 Conjugal transfer protein trbe n=2 Tax=Fusobacte... 52 1e-04 UniRef50_C3KSP5 AAA ATPase n=2 Tax=Clostridium botulinum RepID=C... 52 1e-04 UniRef50_C3WQ25 Conjugal transfer protein trbe n=3 Tax=Fusobacte... 51 2e-04 UniRef50_D2EEW4 Putative uncharacterized protein n=1 Tax=Candida... 51 2e-04 UniRef50_C7X382 Trse protein n=4 Tax=Enterococcus faecalis RepID... 51 2e-04 UniRef50_B5Z5T7 Putative uncharacterized protein n=1 Tax=Bacillu... 50 3e-04 UniRef50_D1JWZ2 Putative uncharacterized protein (Fragment) n=2 ... 50 3e-04 UniRef50_C3RFU1 Predicted protein n=9 Tax=Bacteroidales RepID=C3... 50 3e-04 UniRef50_Q0ZNV8 Putative TrbE protein n=1 Tax=Sulfolobus islandi... 49 6e-04 UniRef50_A0RVD5 ATPase/type IV secretory pathway component n=1 T... 49 7e-04 UniRef50_O87213 TrsE protein (TraE) n=11 Tax=Lactobacillales Rep... 49 9e-04 UniRef50_A6G8L2 Putative uncharacterized protein n=1 Tax=Plesioc... 49 0.001 UniRef50_C5ETG4 TRSE protein n=21 Tax=cellular organisms RepID=C... 49 0.001 UniRef50_C5TJS3 VirB4 protein n=2 Tax=Proteobacteria RepID=C5TJS... 49 0.001 UniRef50_Q8GCN3 TraE/TrsE family NTPase n=6 Tax=Mycoplasma RepID... 48 0.001 UniRef50_C5VLL8 Conjugative transposon protein TraG n=21 Tax=Bac... 48 0.002 UniRef50_B1ZPG6 Putative uncharacterized protein n=2 Tax=Opitutu... 48 0.002 UniRef50_B7U591 Putative uncharacterized protein n=5 Tax=Bacilla... 47 0.003 UniRef50_D1AV72 CagE TrbE VirB component of type IV transporter ... 47 0.003 UniRef50_A8F0L1 VirB4 n=48 Tax=Rickettsiales RepID=A8F0L1_RICM5 47 0.004 UniRef50_B5EKP3 CagE TrbE VirB component of type IV transporter ... 47 0.004 UniRef50_D1QR49 Plasmid transfer protein n=1 Tax=Prevotella oris... 47 0.004 UniRef50_UPI0001C42939 hypothetical protein BpOF4_20614 n=1 Tax=... 47 0.004 UniRef50_C0BU73 Putative uncharacterized protein n=2 Tax=Bifidob... 46 0.006 UniRef50_B4S9L3 CagE TrbE VirB component of type IV transporter ... 46 0.007 UniRef50_D1PSM3 Putative uncharacterized protein n=1 Tax=Subdoli... 45 0.009 UniRef50_C5F2I9 Type IV secretion/conjugal transfer ATPase n=1 T... 45 0.009 UniRef50_C8S1Y9 CagE TrbE VirB component of type IV transporter ... 45 0.009 UniRef50_UPI000185C73B conjugative transposon protein TraG n=1 T... 45 0.010 UniRef50_A7VRX8 Putative uncharacterized protein n=3 Tax=Clostri... 45 0.012 UniRef50_C8SC72 Type IV secretory pathway VirB4 protein-like pro... 45 0.015 UniRef50_C3QQR1 Plasmid transfer protein n=32 Tax=Bacteroidales ... 45 0.016 UniRef50_Q3EN28 TRSE PROTEIN n=9 Tax=Bacillales RepID=Q3EN28_BACTI 45 0.018 UniRef50_C8VVQ1 Type IV secretory pathway VirB4 protein-like pro... 44 0.022 UniRef50_Q84BZ9 Putative membrane-bound ATPase n=6 Tax=Spiroplas... 44 0.029 UniRef50_D0UIP4 ATPase n=5 Tax=Aggregatibacter actinomycetemcomi... 44 0.040 UniRef50_Q1M9N8 Putative crown gall-like type IV secretion syste... 44 0.041 UniRef50_C7CWC1 Predicted protein n=2 Tax=Enterococcus faecalis ... 43 0.042 UniRef50_B9JPS0 Type IV secretion protein n=1 Tax=Agrobacterium ... 43 0.045 UniRef50_A1VQ79 CagE, TrbE, VirB component of type IV transporte... 43 0.047 UniRef50_C2BD73 Putative uncharacterized protein n=1 Tax=Anaeroc... 43 0.048 UniRef50_C3DUE0 Hypothetical conjugation protein n=5 Tax=Bacillu... 43 0.057 UniRef50_A9I2D7 Type IV secretion system protein VirB4 n=1 Tax=B... 42 0.088 >UniRef50_P18004 Protein traC n=51 Tax=root RepID=TRAC_ECOLI Length = 875 Score = 1821 bits (4716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 875/875 (100%), Positives = 875/875 (100%) Query: 1 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT 60 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT Sbjct: 1 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT 60 Query: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS Sbjct: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 Query: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME Sbjct: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 Query: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED Sbjct: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 Query: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP Sbjct: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 Query: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS Sbjct: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG Sbjct: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY Sbjct: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP 540 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP Sbjct: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP 540 Query: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL Sbjct: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL Sbjct: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA Sbjct: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL Sbjct: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL Sbjct: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 Query: 841 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA Sbjct: 841 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 >UniRef50_B6ICF6 TraC protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF6_ECOSE Length = 868 Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/862 (46%), Positives = 575/862 (66%), Gaps = 7/862 (0%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPI 71 ++ L+ K PD S +A ++L EM +P F+ LLPYR Y+ +S LF+N T GF+LE P+ Sbjct: 8 LSQLMGGWKKPDGSQQAQQILDEMDYPSFASLLPYRQYDPDSELFINAKTAGFVLECRPL 67 Query: 72 NGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAIT 131 +GANE+I ++LD+ LR K+PR IPL L+ S V +E+GL +F W G++A+ FNAIT Sbjct: 68 SGANEAISKSLDYFLRDKIPRKIPLTFTLVGSPCVRPMLEHGLADFRWQGKRADEFNAIT 127 Query: 132 RAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQ 191 RA+Y +AA TQF +G PLTLRHYR+F+SY + E+ + + A L Sbjct: 128 RAFYERAALTQFANKKGY--PLTLRHYRLFVSYAEEVGSLTEQKKTELNQVANRVVAGLA 185 Query: 192 GASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 A + +Q VD + + +V E+ N ++ P + + LN +CV+ S L + D + Sbjct: 186 SAGLWSQRVDKKGLVSLVRELANFRHGNIEPPNGSVAEFEPLNTECVDRSLRLMLHPDRI 245 Query: 252 TLGLRENGRNSTAR--ILNFHLARNPEIAF-LWNMADNYSNLLNPELSISCPFILTLTLV 308 L+ R ILNF L +NPE + LW M DN SN+ +P +ISCPF++TL L Sbjct: 246 EQSLQSRRGGERERTRILNFMLEKNPEKPYALWQMGDNISNVTDPLCTISCPFVMTLALE 305 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 VE+Q T EAN K++ L+KK+ + +AK+ PSV+K+A EWG LR+ L + Q S+ ++ N Sbjct: 306 VEEQAGTQREANRKFIQLDKKANSPFAKFVPSVKKQAAEWGGLRESLSTNQDSLARFYFN 365 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 +T FC+D +E ALE E +LN+FR+NG + P F +RN+L+ PFM +GL+ + Sbjct: 366 VTLFCEDRDEVALETEMTVLNTFRRNGLSMYMPEFMQLRNYLSVFPFMMPEGLWSDICRT 425 Query: 429 GVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFR--GMNNTNYNMAVCG 486 +QRA + NVAN++P+VADN + GL P+YRNQL+F+++F R G++ N N++V G Sbjct: 426 NAIQRARASNVANILPVVADNQVCLQGLPIPSYRNQLSFLNLFDRNAGLDTDNNNLSVTG 485 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITD 546 TSG GK+ L+Q +IR VLDSGG A VFDMGD YK LC N+GGVYL+ LRFNPFANI D Sbjct: 486 TSGGGKSFLMQGIIRQVLDSGGRAWVFDMGDSYKGLCRNVGGVYLNALDLRFNPFANIKD 545 Query: 547 IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 I SAE +R+ L V+A+P+GN D+ LLL+AV WL K+N ARIDD+V +++ A + Sbjct: 546 ITASAESIRNLLVVLANPSGNCDDTFMSLLLKAVHEVWLRKKNSARIDDIVHYMRKALEQ 605 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 +Y ++ T+RSR+DE+IV L++Y + G YG+YFNS++PSL D+ + VLE+G L+D+P L Sbjct: 606 PEYRDTTTVRSRMDEIIVGLEKYCSWGLYGEYFNSEKPSLDDNVRFSVLEMGELKDKPDL 665 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 L AVMFS++IY+E RMY + R K+ +IDE W+LL N + +FIE GYRTAR++ GA Sbjct: 666 LAAVMFSMMIYVEQRMYLSDRQQHKVCLIDEAWKLLSKDNKRAEDFIENGYRTARKYNGA 725 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIG 786 YITITQ I DFD KAS AA+AAW NSS+KIIL+Q+ F KY PDQF +R++I Sbjct: 726 YITITQGIEDFDGQKASGAAKAAWANSSFKIILRQNRDAFRKYCLDNPDQFNRFEREVIE 785 Query: 787 KFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 F AA++ FSSF+L+ S+HRL +DP+SR M+SSDG DF++ + + G IH+ + Sbjct: 786 GFPAAREAHFSSFMLRYGGQVSFHRLLLDPISRVMFSSDGEDFDYREAGLRAGKDIHDII 845 Query: 847 WQLAWKKSGPEMASLEAWLEEH 868 +LAW+K EM +L W++ + Sbjct: 846 GELAWRKFPQEMETLTEWIKHN 867 >UniRef50_D2TZZ8 Conjugal transfer ATP-binding protein TraC n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ8_9ENTR Length = 848 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/848 (43%), Positives = 555/848 (65%), Gaps = 10/848 (1%) Query: 18 ALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANES 77 AL D + + + L M +P LLPYRDY+ + LF+N ++GF+LEA P+ GANE Sbjct: 4 ALMEKDTTRETAKKLESMDYPHLRDLLPYRDYDGDHQLFINQNSLGFLLEAQPLIGANEK 63 Query: 78 IVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMK 137 +VE+L+ +++ LPR IPL + L+SSQ V +++ GLR+FSW G +A+ N IT+ +Y+ Sbjct: 64 LVESLEELVKNNLPRDIPLQVILLSSQTVYEKLTTGLRDFSWQGNRADECNQITQGFYLD 123 Query: 138 AAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITT 197 AA QF P+ NLPLTLR Y +F ++C P K+ + ++I+++ + + + ++L + I Sbjct: 124 AARHQFANPQ--NLPLTLRDYHLFFAFCQPCKRITESEIIKVREIRRNLLSALSASDIHA 181 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL-GLR 256 + F+ ++ EMIN + + L P Q D+N Q V+++ + Y+ + G Sbjct: 182 ENASITRFLQMMREMINPDTERLKPYSAQWTEDKDINQQIVQNNTCYWFKPGYVEITGRN 241 Query: 257 ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTH 316 E + ++R ++F+L NP +LW + SNLLNP+ I CPF+++ + EDQ ++ Sbjct: 242 EEDKPFSSRAIHFNLDSNPRAHYLWQNGNIISNLLNPQNGIRCPFVMSFIIQTEDQSRSQ 301 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 EAN ++DLE+K +SYAK+ PS +++ EW LR+ L S +S+ Y+L +T FC+D+ Sbjct: 302 GEANKNFLDLERKVSSSYAKYIPSTKRQHAEWKSLREGLLSTATSLSGYYLGVTLFCRDD 361 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG--LFKQLKEAGVVQRA 434 E A + + +F G ++ MRNFL LPF G L+K + G +QRA Sbjct: 362 EEEAAKEAERTKKAFSMQGLNMVRADLMQMRNFLGHLPFAVGDNPKLWKDFLKTGAIQRA 421 Query: 435 ESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTG 494 ESF NL+P++ADN L+ AG++ P+YR+QLAF+DIF + NTN+N GTSGAGK+ Sbjct: 422 ESFQAVNLLPIIADNKLSQAGIVFPSYRHQLAFLDIFDASLPNTNFNWFESGTSGAGKSV 481 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERV 554 L Q + R VLDSGG+ +FD+GD YK+ C+++GG Y++GETLRFNPFANITDI SAER+ Sbjct: 482 LAQTIARQVLDSGGYLSIFDIGDSYKAFCQSVGGTYINGETLRFNPFANITDITLSAERI 541 Query: 555 RDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 RDQL ++ASPNG +DEVHE L+L+A+ SW K+ RIDDVV++LK Q E+ Sbjct: 542 RDQLCILASPNGLMDEVHESLILEAITESWPNKKQDMRIDDVVNYLKKHRGKIQ--EASR 599 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 I R+DE++VLL++YT G YG+YFNS EP+L+ D + VV ELGGL+ LL+AV+F+L Sbjct: 600 ITGRIDEILVLLNKYTTKGIYGRYFNSSEPTLKPDMRFVVTELGGLKANRDLLMAVLFTL 659 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 +++ EN MY TPR+L+K+N+IDEGW+LLD K+ KV +FIE+GYRTARRH G++ T+TQ+I Sbjct: 660 MLWAENLMYNTPRSLRKMNIIDEGWKLLDAKSPKVRDFIEEGYRTARRHNGSFGTVTQSI 719 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D S+AA AA+ NSS+K L Q AK F + + P F ++ +I KF A Sbjct: 720 RD---KNLSTAALAAYDNSSFKFTLMQDAKAFNSFQKEEPSTFNEMEWALIQKFPPASRA 776 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 FS+ L V +SS+HRL +DPLS ++SS G DF + +++ KEG +I++ ++++A +K Sbjct: 777 GFSAVHLSVGGYSSFHRLMLDPLSNELFSSRGDDFTYREKRLKEGANINDIIFEMAQQKD 836 Query: 855 GPEMASLE 862 +A L+ Sbjct: 837 PALLAKLK 844 >UniRef50_A4WGS7 Type IV secretory pathway VirB4 components-like protein n=5 Tax=Enterobacteriaceae RepID=A4WGS7_ENT38 Length = 866 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/861 (44%), Positives = 540/861 (62%), Gaps = 13/861 (1%) Query: 14 SLVTALKLPDESAKANEVLGEM-SFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPIN 72 SLV + K D +A A L + +P LPYR Y+ + LF+N+ + GF+LEA P+ Sbjct: 9 SLVNSRKREDGAATARANLEQTWGYPSLVAALPYRYYDDVNELFINEGSAGFILEAAPLP 68 Query: 73 GANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITR 132 GANE ++ ALD MLR KLPR P+ + L++S+ VG+RI G+ W G+ +E N IT+ Sbjct: 69 GANEQVIAALDDMLRKKLPRKTPVSVLLLASKCVGERIARGVSSDMWKGDMSEYLNKITK 128 Query: 133 AYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG 192 A++ ++A L PL LR+YR+FI Y P+K+ S+ + ++ + IR SL Sbjct: 129 AFWQRSALKG--LANEREYPLYLRNYRIFIVYGKPAKRFSQQVMDDLVQVRNTIRVSLGA 186 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 A I T +F+ ++ EM+N+ + + + LN Q VE D++V+ Y+ Sbjct: 187 ARIETINTHVNSFLSVMREMMNYRQEQVMTSSGDYNEDEKLNRQIVEPGIDVRVKPSYIR 246 Query: 253 LGL----RENGRN---STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 + L ENG S R++N LA++P+ LW ADN NL P+L I CPF+L+ Sbjct: 247 VELPDRIEENGTRLPASACRVVNMQLAKSPKRFALWQGADNLQNLRFPDLGIPCPFMLSW 306 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSY 365 T +E+Q T +EA K MDL KK+ ++Y + FPS +++A+EW R++L + + + Sbjct: 307 TTELEEQTATQNEALRKDMDLSKKANSAYGQLFPSTKRQAEEWRRNREQLSNNEIAFCRT 366 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 +LN+T F DNN A E +N FRKN E+++ ++ MRN+L C PFM +G+++ L Sbjct: 367 YLNLTLFTPDNNTDAQACELAAVNVFRKNDLEMVTVQYQQMRNWLGCFPFMMQEGMWEDL 426 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 K G R +S+N NLMP+VA+ L+ G+ PTYRNQ+AF D+F +TN+N+AV Sbjct: 427 KMTGATLRCKSWNAVNLMPVVAERQLSHVGMPLPTYRNQVAFFDMFGEENGSTNFNIAVT 486 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANIT 545 GTSGAGKT LIQ ++R VL++GGFA V DMGDGYK+ C GGVYLDG LRFNPFAN+ Sbjct: 487 GTSGAGKTFLIQGILRDVLNAGGFAWVIDMGDGYKNYCHQAGGVYLDGAKLRFNPFANVK 546 Query: 546 DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 DI+QSAE + L+V+ASP LD V E +L +AV +W K++ ARIDDV ++L + + Sbjct: 547 DINQSAEGIVRLLTVLASPTEPLDGVCEAILQKAVMTAWEKKQHGARIDDVHNYLTDPAV 606 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS 665 +E +A+ PTI SRL E+ +LLD Y G G+YFN+D P+L + + VLEL LED+P Sbjct: 607 NEAFADKPTIISRLAELAMLLDTYCTWGPDGEYFNADSPTLDGETRFAVLELLSLEDKPK 666 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 LL +++FSLI+ I+ +MY +PR+LKK+ +IDE WRLL N FIE GYRT RRH G Sbjct: 667 LLSSILFSLILAIQEKMYHSPRDLKKVCIIDEAWRLLGGSNPHAARFIETGYRTVRRHRG 726 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 A+ITITQ I DF AS A AAW NSS KI L Q + F +Y PDQF +++++I Sbjct: 727 AFITITQGIKDF---SASKEAEAAWNNSSTKITLLQDTRAFKQYLADNPDQFSDMEKEVI 783 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEA 845 F A +SS L+ SS+HRLFVDP++RAM+SS G DF F+Q ++ G + EA Sbjct: 784 RGFQPALLTGYSSLLVSAGEFSSFHRLFVDPITRAMFSSRGEDFAFMQDAQRAGSTAEEA 843 Query: 846 VWQLAWKKSGPEMASLEAWLE 866 + LA KK GPE+ LE W++ Sbjct: 844 AYLLAQKKFGPELQELEEWIK 864 >UniRef50_D1RMN8 Type-IV secretion system protein TraC n=2 Tax=Legionella RepID=D1RMN8_LEGLO Length = 858 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 274/844 (32%), Positives = 431/844 (51%), Gaps = 32/844 (3%) Query: 13 NSLVTALKLPDESAKANEV-LGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPI 71 NS+ L +ES+ N + +G+ +P F + LPY+ Y++ES LF+N G + P+ Sbjct: 14 NSIDDYLVDGEESSSQNTLNVGDHQYPLFCKELPYQYYDEESHLFINRWNTGLLYRITPL 73 Query: 72 NGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREF-SWSGEQAERFNAI 130 GANE I E LD +LRTK+ L + L+ VG ++ ++F + EQ Sbjct: 74 TGANEKIAEQLDSILRTKVSDEFTLQLILVKHNQVGHELDAFSKQFMNRDFEQLSVMGKS 133 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKI-IRAS 189 R++Y +AA F +N +T V + K K+ ++ +I AS Sbjct: 134 LRSFYGEAAVHGFKTNTNVNPRITQTECYVVVD---KIKGKNEEEVKACFAQFRIAFEAS 190 Query: 190 LQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 L A I +T +A+ + ++ + H PD++YPK DP + +Q V FD++V + Sbjct: 191 LMSAKIGFRTCNAEELLRLLHFYLAHEPDNIYPKISCYDPKKLIQHQVVGRDFDVEVAKE 250 Query: 250 YLTL-GLRENGR--NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT 306 L G+ G+ + A ++ + P LW+ +N +N+ NPE SI C I+++T Sbjct: 251 GLLFKGVNSQGKAFETVASVMT--IDGLPGEYHLWDNINNSANIFNPEQSIPCNHIISVT 308 Query: 307 LVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYF 366 +V++Q K AN K DL+KK+K YA EK+A+EW R L SG++ Sbjct: 309 YLVDEQNKAQGRANRKTSDLDKKAKGDYALHVAGTEKKAREWRHFRDDLASGKTRSCKML 368 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 N+ F + E A +VE F NG +L R FL LPF+ L K + Sbjct: 369 YNVVLFSR-RAEYARDVEA-ARTCFSYNGIKLALSRRMQTPYFLATLPFLFTNHLQKGFQ 426 Query: 427 EAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 ++ S+N MPL++D T +G+L PT RNQ + ID F G TNYN++V G Sbjct: 427 LPTMMWPISSWNATQYMPLLSDWSGTGSGILLPTLRNQFSCIDPF-SGKLGTNYNISVTG 485 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITD 546 TSG GK+ IQ L+ +VL +GG + D+G YK LC +GGVYL+ L NPF ++T+ Sbjct: 486 TSGGGKSFFIQMLMLNVLFNGGDLFIVDVGGSYKKLCHALGGVYLEYSNLAMNPFTHLTN 545 Query: 547 IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL--KNAS 604 I + + + ++A + G L +A+ ++ + ID V L + + Sbjct: 546 IGKEIQHILSLFQLLACAKDGASDDDRGTLREAILQAFSEHQQTTLIDHVQSKLLELHQN 605 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS-LRDDAKMVVLELGGLEDR 663 D E+Y + LD Y + +G FN+ PS L DA+++V++L +ED Sbjct: 606 DREKYPTGKILAKNLDP-------YCTHSEHGTVFNA--PSKLAPDARIIVVDLKEIEDD 656 Query: 664 PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRH 723 + V+ S++ + RM+ + R+ +K+ +IDE W L V FI +G+RT RRH Sbjct: 657 EHIRAPVLLSILSQFQGRMFNSDRSRQKMCIIDEAWSLFSGDQIAV-NFINRGFRTGRRH 715 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 +++TITQ I D+ A ARAAW NS+ K+I Q AK+ Q + + F + Sbjct: 716 NASFVTITQGIDDY---YAFPEARAAWENSAIKLIFLQDGDSLAKHQQEH-NTFSDFEFK 771 Query: 784 MIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLS-I 842 ++ F AKD FS L++ + SS+HRLFVDP ++ + SSDG D++ V ++G S I Sbjct: 772 LLSGFPKAKDAGFSQVLVRADGISSFHRLFVDPFTKVLLSSDGRDYQAVMNYIEQGYSYI 831 Query: 843 HEAV 846 H A+ Sbjct: 832 HAAM 835 >UniRef50_A8QYQ2 TraC protein n=2 Tax=Legionellaceae RepID=A8QYQ2_9GAMM Length = 865 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 257/841 (30%), Positives = 432/841 (51%), Gaps = 38/841 (4%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 M P LLPY N E+G F+N +MGF L+ P++GA+ES++ +L + + KL Sbjct: 46 MDLPSIKGLLPYETVN-EAGFFVNRNSMGFGLQLSPMSGADESLMNSLAQLFKNKLTVDT 104 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + + + R+ G ++ Y++ A + G N+P Sbjct: 105 DCTVLMYKHPWLEGRLSQNYEPILKQGGIYADLARLSLKYHLNAIKKGYK--NGRNVPAG 162 Query: 155 LRHYRVFISYCSPSKKKSRADILEMENLVKI-IRASLQGASITTQTVDAQAFIDIVGEMI 213 L Y ++ C P + +D+ E +L++ + L+ + + +DA F ++ +I Sbjct: 163 LSDYCCYLFICRPMQ----SDVKEQLHLLQADFESELKVSGFGFRRLDADDFKVLMRALI 218 Query: 214 NHNPDSL-YPKRRQLDPYSDLNYQCVED-SFDLKVRADYLTLGLRE-NGRNSTARILNFH 270 + + ++L +P ++ + L + + S +++ + + + + + G R++N Sbjct: 219 SPDFNTLSWPV---INESNGLIAESIPTPSTVIEIEDEAIEVSIADLKGETQRTRVVNCE 275 Query: 271 LARNPEIAF-LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 ++ P F LW D ++NLL+ E I CPF+++ T+ +Q K ++A + L Sbjct: 276 VSSYPSKPFALWQTPDLFANLLDTEQGIQCPFLISFTIRGVNQEKMKAKAKARAKSLSSN 335 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 + + PS+ +E EW + G+ ++ F N+ + ++ E E + Sbjct: 336 NNAVQSFINPSIREETAEWHFVHDHASKGELYLLPTFYNVVLYTTESKER--EHVAKAIA 393 Query: 390 SFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN 449 SFR GF L R FL LPF+ +GLF L+ G+ ++ FNVANL+P+VAD Sbjct: 394 SFRHLGFTLTQSRCKQWLRFLGSLPFILTEGLFSSLELLGMTKKLSHFNVANLLPVVADF 453 Query: 450 PLTPAGLLAPTYRNQLAFIDIF-FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 GL+ PTYR+QL +++ F R + TN+N ++GAGK+ Q I L G Sbjct: 454 KGAGQGLIVPTYRHQLFYLNTFDDRALPITNFNRLTVASTGAGKSFFEQAQILDGLSRGQ 513 Query: 509 FAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFA-----NITDIDQSAE----RVRDQLS 559 V D+G YK LC+ +GG Y+D TL NPF +T+I+ A ++R+ L+ Sbjct: 514 QIFVIDLGGSYKHLCKMVGGSYIDASTLALNPFTLFDFDGVTEINGQALNDSIQIRNLLA 573 Query: 560 VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 +MASP+ L EV + LL AV W RA++DDV+ L+ S+ Q+ RL Sbjct: 574 IMASPHEALGEVQKAWLLDAVTECWKVHGRRAKMDDVLSALQRMSERPQFQGD----QRL 629 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 ++ VLL +Y + G YG FNSD P L + + VVLE+G LE P LL VMF +I+ I+ Sbjct: 630 KDLTVLLGKYGSQGIYGHLFNSDTP-LLNSSDFVVLEMGELESNPELLTIVMFVMIVIIQ 688 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKV-GEFIEKGYRTARRHTGAYITITQNIVDFD 738 + Y + R +K +IDE WR L ++ V FIE+G+RTAR+H G + ITQN++D Sbjct: 689 GQFYHSDRKREKRCIIDEAWRFLARGSNPVCASFIEQGFRTARKHRGGFAVITQNLLD-- 746 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 + RA +S KI+++Q + +Y +P F PL+ +I FG AK Q FS+ Sbjct: 747 -TMNTLQGRAIAASSDTKIMMRQGS--LKQYMDEHPKHFSPLEARVIESFGEAKTQGFSN 803 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 ++Q N +++HR F DP SR ++S+ G + ++ +G+++ +A+ ++A K G E+ Sbjct: 804 LMIQFGNVTTFHRYFCDPFSRVLFSTSGEEVSDIESLTNQGVTLTDAIQRVAQKYYGEEL 863 Query: 859 A 859 Sbjct: 864 C 864 >UniRef50_B6ESX9 Conjugative transfer protein TraC n=14 Tax=Vibrionales RepID=B6ESX9_ALISL Length = 843 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 249/845 (29%), Positives = 403/845 (47%), Gaps = 48/845 (5%) Query: 44 LPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIP--LCIHLM 101 LPYR ++ E LF N T++GF + + GAN+S +EAL+ +L T LP+G L Sbjct: 21 LPYRFFDDEHTLFHNTTSIGFGFQLNVLGGANDSAIEALNKIL-TTLPQGKQWDYQFTLT 79 Query: 102 SSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVF 161 S+ V IE S G R R Y A+ + F + + L H +F Sbjct: 80 SNHQVSHLIEQNTALMSKRGGICARLANNERTYADFASTSGFLHRQKHHFTLREHHSFLF 139 Query: 162 ISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLY 221 +S S DI ++ + + SL +T + I V +N N + Sbjct: 140 VSTTS-------RDIDKINDTKATLYTSLTQLGLTLTPIGVPELISYVDGHLNFNANKTR 192 Query: 222 PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN-STARILNFHLARNPEIAFL 280 P++ + + L+ Q + + V ++ +N T+R++NF L R P L Sbjct: 193 PEKATYNEHEPLHTQMLSPDSEFLVSRGHVDSRHTDNKHGEQTSRVINFGLLRLPSDFRL 252 Query: 281 WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS 340 + + + +S+L N SI+CPF ++ +ED K ++ + L K + P+ Sbjct: 253 YALPECFSSLKNVAQSINCPFTCSVQFQIEDNGKATADNDGHISALMKTVGSKMQVLVPT 312 Query: 341 VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS 400 + E E +++ L S + ++VS +N++ F + E + Q +++F G ++ Sbjct: 313 AKDELAERKQIQLGLLSKEFTMVSMVMNLSLF--SSKEKQRDDSQAAVSAFSSGGIDIAP 370 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT 460 +L+ LPFM +G +K K AG ++ +S N N P++ DN G+L PT Sbjct: 371 LNMLQGHAYLSSLPFMMSEGFWKDSKRAGRIRTMKSSNAVNFFPIIHDNKNFSGGMLLPT 430 Query: 461 YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYK 520 R Q++F D F G +N YN+A+ G SGAGK+ +Q L +SV G + D G YK Sbjct: 431 MRQQISFFDPFNCGSDN--YNIALTGGSGAGKSFFVQLLAKSVYSKFGKVWILDKGASYK 488 Query: 521 SLCENMGGVYLDGETLRFNPFANITDIDQSAER---VRDQL--------------SVMAS 563 L + G Y+ + + NPF ++ I +E V D+L + MAS Sbjct: 489 KLTLMLEGTYMTSKEIFLNPFTHLGKIKAKSEHEASVDDELNPLAEVLDNITALFATMAS 548 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 P LD +L A+ +W K R+DDV L S ES R R+ ++ Sbjct: 549 PREELDPFQTAVLGDAILNAWNDKGPLTRVDDVQAALFAIS-----TESDNDR-RISDIA 602 Query: 624 VLLDQYTANGTYGQYFNSDEPS-LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM 682 L++Y +N YG FN +PS L + + LEL G + ++L +F+L++ I +M Sbjct: 603 TQLNKYCSNNVYGDTFN--KPSMLNPNIHITTLELDGFPE--AVLRPAIFALMVSINQQM 658 Query: 683 YRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDK 741 Y T R+ KL +I+E W LL N + EFI GYRTAR+ G++ T+TQ I DF Sbjct: 659 YLTGSRSTPKLCIIEEAWSLLSGANAQAREFINTGYRTARKFGGSFCTVTQGITDF---F 715 Query: 742 ASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL 801 A++ A A + NS I L+Q + F + Q PD F P ++ ++ F + +S ++ Sbjct: 716 ANAEAMACYNNSDIHITLRQ-GEGFTSFLQDNPDTFSPYEQQVVKGFEKSGVAGYSCAMI 774 Query: 802 QVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASL 861 + H+S+HRLF DP +RA S++ +FEF + G + +A+ Q A G EM Sbjct: 775 KAGGHASFHRLFTDPFTRACLSTEPNEFEFCETLMSNGTELMDAIEQTAEHFYGDEMQKF 834 Query: 862 EAWLE 866 +A L+ Sbjct: 835 DAMLQ 839 >UniRef50_Q5ZTS4 TraC n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS4_LEGPH Length = 865 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 229/835 (27%), Positives = 388/835 (46%), Gaps = 67/835 (8%) Query: 44 LPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLM-- 101 LP Y+ E+ ++ M E + GA+E V L +L LP C H + Sbjct: 73 LPDEVYDSEADIYPYKQASHMMFECSTLIGASEETVTILTSILTDILPP--ESCFHALFW 130 Query: 102 SSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVF 161 +S +G I+ + + E + +Y K + LR +R+F Sbjct: 131 ASPKIGHMIDEMEHQRNQGSEVLKALAHRRAEFYRKGVYSSLTKESN----FVLRDFRLF 186 Query: 162 ISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLY 221 + P +K D L + +L + I +L+ +I + + + I + E + DSLY Sbjct: 187 LCISIP-RKSIEDDRLLLGSLREDISNNLKSVNIICKELSIEEVISLKREWL-FPTDSLY 244 Query: 222 PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLW 281 ++ D +++ +Q + ++V+++ + + E+ R I + + P+ W Sbjct: 245 EEKTNYDTNTEIRFQLTDIEASMRVKSNQIEIEREEDTR----VIKCLSVRQYPKSPVQW 300 Query: 282 NMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY-AKWFPS 340 + D + + N L ISCPF+ + + ++D+ K + + KY D + +K + AKW + Sbjct: 301 QLGDLFGKMFNTSLQISCPFLFSFAIRIKDKDKVMAALDAKYADEGQNAKQPFIAKWVKN 360 Query: 341 VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS---FRKNGFE 397 K+ E ELR+RL SG S+V + N+ F T V +D+ + FR N F+ Sbjct: 361 FNKKYAEIEELRERL-SGDDSLVDSYYNVLLFT-----TPANVRRDVRRAKDVFRGNQFD 414 Query: 398 LISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL 457 L +P ++ L +PF +G+F K G V+ SFN NL+P+ + AG Sbjct: 415 LRTPTGLQLQTLLASMPFAPAEGMFDDYKSFGRVRPLTSFNTVNLLPIQGE--WKGAGRF 472 Query: 458 APTY-RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 A Y + + F I+F NYN+A+ G GK+ L+ I+S+L GGF + D+G Sbjct: 473 AQVYPQRRGQFTAIYFFDNVVRNYNVAIVAPPGKGKSFLMNDYIQSLLSQGGFVYIIDVG 532 Query: 517 DGYKSLCENMGGVYLD---GETLRFNPFANI---TDIDQSAERVRDQL----SVMASPNG 566 Y CE + G +D + N F+ I D + + V +QL +MA P+G Sbjct: 533 GSYAKSCEMLNGQLIDFNHDTEISLNLFSTIDAQAKNDTAFKDVHNQLIQLVGMMARPSG 592 Query: 567 NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLL 626 N+ + + +A+ A W N I + L++++D I + LL Sbjct: 593 NVSDEERSHIEKAIEAMWRQHHNATTITLIAHHLESSNDP--------ISQNIGR---LL 641 Query: 627 DQYTANGTYGQYFNSDEPSLRDDAK--MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR 684 YT NG YG YF EP D K +V+LELGGL+ L V+ L+ I N MY Sbjct: 642 YSYTKNGRYGSYF---EPPCSLDFKRNLVILELGGLDGNKDLQRIVLKILMYQITNAMYY 698 Query: 685 TPRNLKKLNVIDEGWRLL-DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS 743 TP+++ K +IDE + LL D F+ +GYR A ++ G +IT+T + D++++ Sbjct: 699 TPKHIPKSCLIDESYELLSDNGTGGSANFVNEGYRRAPKYGGNFITVTHGLDDYENN--- 755 Query: 744 SAARAAWGNSSYKIIL---KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 A+ + N+ YKI L K + NQL D + +I + +S FL Sbjct: 756 PTAKMCYDNAYYKIFLGASKSTIDTLKTSNQL--DAY---GERLIRSLKITNE--YSEFL 808 Query: 801 LQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 + E +S+ HRL VDP SR + ++ GP+ E +++ GL + +A+ ++A + G Sbjct: 809 MMCEENSTVHRLIVDPFSRVLNTTRGPEVEALKRLMATGLPLADAISKVALEVYG 863 >UniRef50_B8EFP1 Type-IV secretion system protein TraC n=6 Tax=Shewanella baltica RepID=B8EFP1_SHEB2 Length = 862 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 232/868 (26%), Positives = 403/868 (46%), Gaps = 68/868 (7%) Query: 44 LPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIH--LM 101 LPYR Y+ +F N T+GF GAN+ +++ ++ ++ T LP G ++ Sbjct: 27 LPYRIYDDAEQVFENANTLGFGFAISLFGGANDDLIKTMNALVCT-LPEGDKWHYQFVMV 85 Query: 102 SSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ-FPLPEGMNLPLTLRHYRV 160 + VG+ IE ++F A A Y K ++T+ F L++ + Sbjct: 86 GNNQVGELIEQNQALLKGRNAICDKF-ANNEAIYAKHSSTKGFGTKLSSAYHYDLKNTKG 144 Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMIN--HNPD 218 F + S ++ D+ + ++ + + L + + + A I+ E +N H D Sbjct: 145 FF-FVSTTE-----DMPALLDMRLGVESELAQTGMHIRRLGADDLIEHCREHLNFSHQQD 198 Query: 219 SLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST----ARILNFHLARN 274 + P + + Y LN Q + + + D ++ +R S ++N L Sbjct: 199 RVTPAK--YNEYQPLNTQILSPDSEFIINRD--SVNIRHTPMQSDNSVDTTLINLGLKGL 254 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 P L+ + ++L S+ CP+ ++++ + + + + K L K + Sbjct: 255 PNDFRLYAFPNCIASLSYTMNSVQCPYRVSVSFYINKTGEQTTRNDSKIGSLTKTVNSPM 314 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 PS E E E+++ L S + + LN+T + + E + +FR Sbjct: 315 RLLIPSAADELAERKEIQKGLSSHAFKITTMTLNVTLYTTE--EKHRHDTSKAIATFRTA 372 Query: 395 GFELISPRFNHMRNF--LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 G +LI R N ++ L+ LPF +G K ++AG+ ++ N+ N +P+VAD Sbjct: 373 GIDLI--RNNKLQGMCTLSTLPFSMSEGFMKDSQKAGLCFMMKTSNLVNFLPIVADYKRL 430 Query: 453 PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVV 512 AGLL PT R+Q+++ D F G +N YNMA+ G SGAGK+ +Q L++S+ GG A + Sbjct: 431 SAGLLLPTMRHQISYFDPFNCGSDN--YNMAITGGSGAGKSFFMQALVKSIFAKGGKAWI 488 Query: 513 FDMGDGYKSLCENMGGVYLDGETLRFNPFAN----------------ITDIDQSAERVRD 556 D G YK L + +GGVYLD + NPF + + D Q+ + + + Sbjct: 489 LDKGQSYKKLTQTLGGVYLDSSQIFLNPFTHLGKVLSVRDAGTFGPILDDEGQAIDPITE 548 Query: 557 QL-------SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQY 609 L + MASP+ L LL A+ +W N IDDV L + Sbjct: 549 VLGNITALIATMASPDEKLTGFQTALLGDAILLAWQKCGNDTLIDDVQKALYD------I 602 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDRPSLLV 668 A +R+ ++ L+++ ++G +G FN +PS+ D + + LEL G + L Sbjct: 603 AAQKNDDTRISDIAAQLNKFCSSGIHGAIFN--KPSMLDPNIDITTLELDGF--KGELQR 658 Query: 669 AVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 V+F+L++ I +MY + R++ K+ VI+E W L+ N + +FI +GYRT R+ G++ Sbjct: 659 PVIFALMVTISQQMYLSGQRSIPKICVIEEAWSLMSGANAQSKDFINEGYRTVRKFGGSF 718 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGK 787 T+TQ + DF ++ + AA + S I L+Q F + +PD F P ++ MI Sbjct: 719 ATVTQGMNDFFANAEAEAALNS---SDIHITLRQ-GDGFGDFLNKHPDHFSPFEQHMIKS 774 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVW 847 F A D S +L+ S+HR+F DP SRAM S++ +FE + K G+ + +A+ Sbjct: 775 FPRANDAGHSCVMLKAGGLVSFHRIFADPWSRAMLSTEPKEFEHCENLIKGGMPLLDAIE 834 Query: 848 QLAWKKSGPEMASLEAWLEEHEKYRSVA 875 A +MA +A L ++ A Sbjct: 835 LTAQHFYPDDMARFDAILSAAATHKEAA 862 >UniRef50_Q1MY39 ATPase n=1 Tax=Bermanella marisrubri RepID=Q1MY39_9GAMM Length = 849 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 233/856 (27%), Positives = 393/856 (45%), Gaps = 103/856 (12%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIH 99 S L P+ Y++ G+F N+ ++GF LEA P G +E+ + L+ ++ K Sbjct: 50 LSSLFPWESYDETRGIFFNEDSVGFCLEASPSTGLSEADFKTLEGVISRKHE-----ADS 104 Query: 100 LMSSQLVGDRIEYGLREFSWSGEQAERFNAIT-----------RAYYMKAAATQFPLPEG 148 + +V D G+ + SW + F+ R Y ++ L G Sbjct: 105 TIQFTIVADSNVDGIYK-SWERSRTRNFDDPAYEIFQTLSENRRKYLLQGKWKS--LFSG 161 Query: 149 MNLPLTLRHYRVFISYCSPSKKK---SRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 M P +R++R+ IS+ P + S+ + + + + I ASL+GA + ++ V Q Sbjct: 162 M--PYVVRNFRLIISFTIPKPRGGNISQTTVDALSSKRESIIASLKGAKVHSKLVHPQDL 219 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSF--DLKVRADYLTLGLRENG---- 259 I++V ++ H D D Y +NY E+S D V ++ L R+ Sbjct: 220 INLVSALL-HPTD---------DGYKPVNYD--ENSLIKDQIVSSETAFLPGRDGSSIIY 267 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 R+ +L + + + P+ N + + L+ I CPFI T+++ D+V + Sbjct: 268 RDKKVSVLPWSVRQYPQYWKGSNSDELIGSFLDNVRQIPCPFITTMSINFPDRVDEGGKI 327 Query: 320 NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 K M + + ++ +K+ P +K A +W + ++ +G SS+V + F E Sbjct: 328 KQKTMRATQMADSAVSKFVPQWKKRASDWRYIEEKFQNG-SSLVKTLYQVVLFAPQGEEE 386 Query: 380 ALE-VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + E QD+ S+ G+ L RF + FL+ LP + G+ +R ++N Sbjct: 387 SCEQALQDLYESY---GWNLQKDRFIPVHGFLSALPMIFGREFVDDTNRLRRYRRMLTWN 443 Query: 439 VANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 N+ PL + LL R Q+ ID + N +N+A +SGAGK+ Sbjct: 444 AINVSPLFGEWQGDGNNSLLMHGRRGQVMTIDPYQNKAGN--FNIACSASSGAGKSFFTH 501 Query: 498 PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLRFNPFANITDIDQSAER 553 +I SVL GG +VFD G Y+ +GG YLD T+ NPF NI +D+ Sbjct: 502 EMIFSVLGEGGKVIVFDSGRSYEETVTLLGGQYLDFGDKTRTICLNPFTNIP-LDEGG-- 558 Query: 554 VRDQL-------SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 ++D L S MASP+ ++ ++ + L QA+ ++ N+ + V++ L + Sbjct: 559 LKDHLPLLKILISNMASPSEDIPQIMKSALEQAIAKAFAKFRNKCSVTRVIEELLEMNSD 618 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD-EPSLRDDAKMVVLELGGLEDRPS 665 E E+ +L Y+ +G YG+YF D L+D + VVLEL L +P Sbjct: 619 ESI-----------ELSKMLYPYSRDGVYGEYFEGDANIDLQD--RFVVLELDDLAKKPG 665 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 L V+ L++ I Y + R+ KKL +IDE WRLL + G+FIE+GYR AR++ G Sbjct: 666 LQEIVLLILMMNINEVFYHSDRSQKKLCIIDEAWRLL---QGRAGDFIEEGYRVARKYGG 722 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 A++T+TQ I D+ S A+AA+ N+ + +L+Q E ++R I Sbjct: 723 AFMTVTQRIADY---YTSPVAQAAYANADHTWLLRQKTDELRS----------SIERGEI 769 Query: 786 ----GKFGA-----AKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKR 836 GKF + +S RL VDP++ +YS+ + +F++ KR Sbjct: 770 DGSKGKFEVFNSLKTEQGKYSEIAFMSPAGLGVGRLIVDPVTEKLYSTKAEEVQFLRNKR 829 Query: 837 KEGLSIHEAVWQLAWK 852 KEG+ + A+ +LA K Sbjct: 830 KEGVDLMTALTELAGK 845 >UniRef50_Q0F363 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F363_9PROT Length = 792 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 213/817 (26%), Positives = 363/817 (44%), Gaps = 73/817 (8%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 P+FS LPY + ++ N+ + GF++E +P GA+ + L +L P + Sbjct: 22 PRFSHWLPYLAADAADCVYENENSHGFVMECMPQVGADMEMARILTSLLTLGWPPDTGIQ 81 Query: 98 IHLMSS----QLVGDRIEYGLREFSWSGEQAERFNAITR---AYYMKAA-ATQFPLPEGM 149 +H+ +S ++ + E S S + + + R Y + A A+ F Sbjct: 82 VHMYASPNIRSMLAGWASIRISETSDSQRASGIYRTLARRRVEYILSGARASLFN----- 136 Query: 150 NLPLTLRHYRVFISYCSPSK--KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFID 207 + P +R +RVF+S P + +++RA ++E+ K A L GA + + A I Sbjct: 137 SAPYLIRDFRVFVSVTLPGRMSEENRARLIELRRGAK---AVLAGAHLPAWDMSPSALIT 193 Query: 208 IVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARIL 267 + EM+N Y + DP + Q + L V+ D++ + NGR R++ Sbjct: 194 WLAEMLNQED---YDRDIAYDPGRLIRNQILNYGTTLDVKPDHILI----NGRTEV-RMM 245 Query: 268 NFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLE 327 + + PE LW M+ + L CPF+ TL + + D + A +K Sbjct: 246 S--VKNYPEEFPLWGMSGLVGDFYQANLQYPCPFLFTLGVHLPDLESAKAGAQMKAARAT 303 Query: 328 KKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDI 387 ++T AK+ P + ++W + L G S +V + + F ++ EQ Sbjct: 304 HDAETPMAKFLPDFALKKRDWDIVMHALAEGHS-MVQLYHQLVLFAPRGR--GVQAEQAA 360 Query: 388 LNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 R +E RF + L LP K ++ +K + N ++ PL+A Sbjct: 361 RAVLRGKSWESCLDRFMQTQGLLAALPMTLSKEMWSDIKRMERYSTKTTGNAMHMAPLLA 420 Query: 448 D--NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD 505 D TP L+ + R Q+ D+F NYN+AV SG+ K+ L+ + S L Sbjct: 421 DWKGTGTPT-LMLYSRRGQVMHFDLF--DNKEGNYNVAVAAASGSEKSFLLNEITLSYLG 477 Query: 506 SGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMA 562 GG + D+G Y+ LC + G +++ + NPF ++ D+D+ ++ L+ MA Sbjct: 478 IGGRVWIIDVGRSYEKLCRLLEGEFIEFAPDSNICINPFTHVRDLDEEMALLKPLLARMA 537 Query: 563 SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEM 622 + + D++ +L +A+R SW ++ N + DV D+L D R ++ Sbjct: 538 AASRETDDLENAMLEEAIRRSWESRGNTMTVTDVADWLAAQDD-----------DRARDL 586 Query: 623 IVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM 682 +L YTA G Y +YF +L D + VVLEL L+ + L V+ ++ I+ M Sbjct: 587 ARMLLPYTARGMYARYFEGRN-TLDFDNRFVVLELEELKAKKDLQAVVLMIVMYQIQQAM 645 Query: 683 YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 Y R +K+ +IDE W L+ GEFIE GYR R++ GA+IT TQ+I D+ A Sbjct: 646 YLGERGQRKICIIDEAWDLMS----GAGEFIETGYRRVRKYGGAFITATQSIGDYYKYDA 701 Query: 743 SSAARAAWGNSSYKIILKQ---SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSF 799 S AA+ NS + ++L+Q S ++ + +L D + + M+ + + FS Sbjct: 702 S---LAAFENSDWLLLLRQKKESVEQLTESGRLKVDDSM---KRMLMSLKTSHGE-FSEV 754 Query: 800 LLQVENHSSWHRLFVDPLS--------RAMYSSDGPD 828 + RL VDP S R + S G D Sbjct: 755 FIYSAAGMGIGRLVVDPYSTLLVFEQGRGLRSHQGTD 791 >UniRef50_A0B4N6 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4N6_BURCH Length = 864 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 221/848 (26%), Positives = 376/848 (44%), Gaps = 73/848 (8%) Query: 43 LLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMS 102 LLPY Y+ + L+ N ++GF+L P GA+ + +L H L +P G L L+ Sbjct: 51 LLPYDQYDPATELYYNTDSVGFVLAVAPQTGADAELTRSL-HGLYDSVPAGYGLQWMLLG 109 Query: 103 SQLVGDRIEYGL---REFSWSG-------EQAERFNAITRAYYMKAAATQFPLPEGMNLP 152 ++ + + + RE++ +G EQAER RA +++ Q PL G N Sbjct: 110 DPIIEESLNAYVDLRREYAEAGRAPSFYLEQAER-----RAAFIRGKLGQ-PLFLGQNYS 163 Query: 153 LTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQT------------- 199 +T + R+ +S I E++N+ ++ A+L AS+ ++T Sbjct: 164 ITDK--RLLLSIVRKGSLDDLKLIEEIQNIRDVVGATLSSASLASRTAEPDDLKRFLWPI 221 Query: 200 VDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR-EN 258 ++ AF E I+ P R QL + ++V+A +L G+ E+ Sbjct: 222 LNPSAFFGDGAETIDQTYSDDKPIRDQLTAFG----------HHMRVKAKHLLYGVPPED 271 Query: 259 GRNSTARIL--NFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTH 316 ARI +F + + P+ LW M + +L N CP+++TL +++ DQ Sbjct: 272 ADEPDARIAVRSFGVHQYPKSKELWEMNNIVGSLFNDVHQYPCPYLITLGVLILDQTAVE 331 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC-KD 375 + A L+ + +++ AK P + + ++W + +L G S+ + +T F + Sbjct: 332 TRAALRGARATQNAESKIAKLQPELALQNQDWKAVSMQLTQG-GSMCELYHTLTLFAPRK 390 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAE 435 E + + I S R F +++ + FL+ LP M + LK+ ++ Sbjct: 391 KMEQCVAAAKGIWRSERFKLFPMLT---QQLTTFLSALPMMLTSDMRDDLKKFRLITTKT 447 Query: 436 SFNVANLMPLVADNPLTP--AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 + N ++ P++ + T A LL R A +DI+ G TNYN V GTSGAGK+ Sbjct: 448 TVNATDMAPVLGEWSGTSGRANLLFFGRRGTPALVDIYSSG---TNYNGFVDGTSGAGKS 504 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI-----T 545 L+ +I + GG + D+G Y+ + G Y+D G + N F+ Sbjct: 505 VLLNEIIGAFRSVGGIVRICDVGYSYEKQIDMGDGQYIDFKPGSRIIINAFSTAGIDTEN 564 Query: 546 DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 +D + +R ++ M SP + LL AVR W V D L + D Sbjct: 565 GLDSEVKFIRPIIARMVSPTAPITPFEGALLDVAVRIVWKDYGQEGSPTLVRDALLSLKD 624 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS 665 E E+ V L+ + G YG Y N ++ D ++V LEL L P Sbjct: 625 QNGQPERIAY-----ELAVRLEPFCKGGVYGDYVNG-RTNVSLDNEVVGLELEHLNSDPQ 678 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 L +M L + N MYR R+ KL + DEGW+++ + + +F+E+GYR AR++ G Sbjct: 679 LRTVIMLGLTNQVTNEMYRFDRSRPKLFLQDEGWQIVG-DDQESADFMEEGYRRARKYEG 737 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 ++ TQ I D +KA+ +AA+ NS++K LKQS K + P + M+ Sbjct: 738 SFFFATQGITDAGMNKAT---QAAFDNSAWKFHLKQSDDTLKKIEKGDVMDLSPGLKRML 794 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEA 845 ++ L+ + R D + AM ++ GPD+EF+++ R G S +A Sbjct: 795 KSLRPVPGRYSEFVLVDPNGGTHLLRHIPDEFTLAMATTKGPDYEFMERLRTSGTSTEDA 854 Query: 846 VWQLAWKK 853 + L K Sbjct: 855 IRALIQAK 862 >UniRef50_A1WDF4 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A1WDF4_ACISJ Length = 874 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 224/860 (26%), Positives = 386/860 (44%), Gaps = 74/860 (8%) Query: 22 PDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEA 81 P A ANEV S +L Y Y+ ++GLF ND ++ F E I GA++ + Sbjct: 32 PAPVAAANEV---TSLYGLHSILKYDQYDPDTGLFYNDNSVAFCFEVIAQTGADDDMASR 88 Query: 82 LDHMLRTKLPR-GIPLCIHLMSSQLVGDRIEYGLREFSWS---GEQAERFNAIT--RAYY 135 L+ + P GI C L S ++ D+ + + + + G+ F + R Y Sbjct: 89 LNTLFTLVPPHYGIQWC--LFGSPVLDDQFQAYMDQRHIAVDNGKTTPFFQELAKRRVEY 146 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 + A + P N +++ R+ S + + EM L + +RASL+ AS+ Sbjct: 147 IYKAKGK---PLWPNDNYVVKNIRLLFSITKAGSFRDAKLVEEMYELRETVRASLRTASL 203 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNY--------QCVEDSFDLKVR 247 + +DA I + ++N P+S++ K +P+ DL Y Q ++V+ Sbjct: 204 PSFPLDADGLISFLWPILN--PESMFSK----EPFPDLRYDDGKSIKNQVTAFGQHVRVK 257 Query: 248 ADYLTLGL---RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 A+ L GL ++ + + F + + P+ LW MA+ + + L CPF++ Sbjct: 258 ANELLFGLPPEKQGDEDKRIAVRGFGVLQYPQKKELWEMANIIGSFFDDGLQYPCPFLVC 317 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVS 364 + D +A +K ++ +K+ A++ P ++ +A +W + +L +G S+ Sbjct: 318 GGVFTLDPNVVDGKAQIKAARTKQNAKSKMAEFQPELQAQANDWDIVLHQLNNG-GSMCE 376 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 + + F Q LN +R F + + + + LP + + Sbjct: 377 LYHTLLLFAP--KRVINRASQVALNVWRSERFTICPLQLLQLTALYSSLPMTLTETVRDD 434 Query: 425 LKEAGVVQRAESFNVANLMPLV-----ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN 479 L++ ++ + N ++ P++ A +P+ ++ R F+D F N Sbjct: 435 LQKLRLITSKTTVNAVDMAPVIGEWKGAGDPV----MMFFGRRGTPTFLD--FYSNQQGN 488 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETL 536 YN+ V G SG+GK+ + ++ + G V D+G Y++L G +L+ L Sbjct: 489 YNVFVAGVSGSGKSVTMNEVVSAYRGIGARVWVIDVGRSYQNLIRLQKGTFLEFTPSTKL 548 Query: 537 RFNPFANI---TDIDQSAE--RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL---AKE 588 NPF + ++D AE ++ + MASPN L E L+ +A+ A W Sbjct: 549 CINPFTWVGTDDELDFKAEMRMLKPMIGRMASPNAPLTEFQYALIGEAITAVWQDYGQDT 608 Query: 589 NRARIDD-VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 N RI D ++ +KN S S + E+ L +T +G YG +FN ++ Sbjct: 609 NPTRIRDYLLSNIKNESGSTERVAY--------ELAKQLAPFTKDGVYGDFFNG-RANIS 659 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH 707 DA MV LEL L++ P L V+F L I + MY T R+ KKL ++DE W+LL + Sbjct: 660 LDADMVGLELEELKNAPELRRVVLFVLTSRIAHDMYLT-RDRKKLCLVDEAWQLLG-ADK 717 Query: 708 KVGEFIEKGYRTARRHTGAYITITQNIVD-FDSDKASSAARAAWGNSSYKIILKQSAKEF 766 + EFIE+GYR AR++ G + TQ I D + +D AA+AA+ N+ +KI+L+Q K Sbjct: 718 ETAEFIEEGYRRARKYNGIFCVGTQGIEDAYKND----AAQAAYNNADWKILLRQDRKNL 773 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 K + F P + M+ + + FS L+ N S R DP S M S++ Sbjct: 774 EKLIEDGMVNFSPAVKRMLLSLRTERGR-FSEMLISSPNGDSVVRHIPDPFSLLMASTNA 832 Query: 827 PDFEFVQQKRKEGLSIHEAV 846 DF ++G S EA+ Sbjct: 833 QDFNECNALLEQGHSTMEAL 852 >UniRef50_A3VN21 TraC n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN21_9PROT Length = 857 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 236/883 (26%), Positives = 385/883 (43%), Gaps = 91/883 (10%) Query: 21 LPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVE 80 L E + + V E S + S +LPYR +++E L++N + G++LE +P GA+E++V Sbjct: 16 LTGEGSLFDGVRRETSLDRLSEMLPYRLWDEEKALYLNAASTGWILEVVPFLGADETVVS 75 Query: 81 ALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS---GEQAERFN--AITRAYY 135 L M +P L I +S +G ++ SW+ G +A F A+ R + Sbjct: 76 VLAEMFSDGIPDNAYLQILNWASPRIGPVLD------SWATARGGEAGVFKTLALHRVDH 129 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISY-----CSPSKKKSRADILEMENLVKIIRASL 190 ++ A + + P R +RVF++ SP + ++E L + +L Sbjct: 130 LRRGAFR---SLSAHAPFLARQFRVFVALGVEGDASPEVRH------QLEGLRSNVAQAL 180 Query: 191 QGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 + + ++ V I + E++N ++ DP L+ Q V L+V AD Sbjct: 181 KSLGVASRPVAPDGLIRFLDEVLNPQ-FAVTRASAGYDPAELLDRQIVRPDTSLRVEADR 239 Query: 251 L-----------------TLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNP 293 L T L E+ R + F + PE MA + LN Sbjct: 240 LLFETIAPADRSPFEAPGTTQL-EDYRTGRFDVRAFSARKFPERFDQGGMALAIGHPLND 298 Query: 294 ELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQ 353 +L + CP + L + + ++ A K+ E+++ T+ ++ P ++ +A +W +R+ Sbjct: 299 QLRLPCPVLSCLAIAFGSKESSNDLAAAKFGRAEQQAATNMVRFLPELKDKADDWKWVRE 358 Query: 354 RLGSGQSSV-VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 R+ G V FL + A + V + +R G+EL RF + C Sbjct: 359 RVRDGARLVRAGSFLIMVAPEGEAEAAERAVR----SLYRGMGWELAKDRFVATQTLGAC 414 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN-PLTPAGLLAPTYRNQLAFIDIF 471 LP GL L++ ++ + + PL + ++ L+ R Q F Sbjct: 415 LPLTLADGLGADLQKLRRLRFMVTDTCVQIAPLQGEYLGMSTPDLMLLGRRGQPFFWSP- 473 Query: 472 FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY- 530 F N+N+A+ G+SG+GK+ L+Q L+ + +G V D G+ +K +CE +GG + Sbjct: 474 FGNQGAGNHNVAIIGSSGSGKSVLMQELVTGLRGAGTNVTVIDDGESFKHMCEALGGRHV 533 Query: 531 ---LDGETLRFNPFANI------TDIDQSAER---VRDQLSVMASPNGNLDEVHEGLLLQ 578 L+ + NPF+ + D D + E VR + MA GL+ Sbjct: 534 KFTLEADVC-LNPFSLLDERKAKEDGDYATESLTLVRAMIEQMAKGEERATAEERGLIDS 592 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 AV W A+ A IDDV LK EQ AE + + L YT G YG + Sbjct: 593 AVAEVWKARGILAGIDDVAAALK-----EQGAEGVKLAN-------ALRPYTTAGLYGPF 640 Query: 639 FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 FN E SL D + V E+ LE +P L VM +L+ I RM R L VIDE Sbjct: 641 FNG-EASLVIDNPLAVFEMKDLEAKPELRAVVMLALMFLINQRMMADRREKMAL-VIDEA 698 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W LL GEFI R R++ GA IT TQ I D+ + A+AA+ NS + I+ Sbjct: 699 WALLG--RGAAGEFIAGFARRCRKYGGAIITGTQGIDDY---YRTEGAKAAFENSDWCIV 753 Query: 759 LKQSAKEFA---KYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 LK + A K +L D D+I + + +S L+ + RL +D Sbjct: 754 LKLKPEAIALVLKSERLSIDAHTA---DIIRSLSVSAGE-YSEMLIMGPHGRHVGRLVLD 809 Query: 816 PLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 P S ++SSD F ++ +GL++ EAV ++A++ E+ Sbjct: 810 PFSATLFSSDARTFAEIEALEAQGLTVAEAVERVAFRHQDKEV 852 >UniRef50_D0SGY4 Type IV secretory pathway protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY4_ACIJO Length = 869 Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 225/868 (25%), Positives = 386/868 (44%), Gaps = 66/868 (7%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIV 79 K P +N++L Q + Y ++ E+GLF N+ T+GF E IP GAN+ +V Sbjct: 26 KRPSPVKLSNKILESYGMHQ---VFKYDMFDPETGLFFNEGTIGFCFEVIPQTGANDEMV 82 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIE--YGLREFSWSGEQAERFN---AITRAY 134 L M T +P + I + + I+ Y +R+ + + F A R Sbjct: 83 NRLLTMF-TPIPADTGIQIQTFGNTVFDGMIDRYYQIRQAAQEQGDIDSFGIDLAKKRIA 141 Query: 135 YMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS 194 Y + + PL G +++ + IS +++ +I M NL + SL+ A Sbjct: 142 YFERKIGE-PL-YGSQSNYSIKKPTMVISVTREGNLENQKEIDLMTNLRHSMLNSLKQAE 199 Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSLYPKRR----QLDPYSDLNYQCVEDSFDLKVRADY 250 + +DA A I + ++N P+ L+ R + D + Q + +VR Sbjct: 200 LAAFHMDAHALITHLTIILN--PEILFSNERLPIIEYDENKRVKEQITKIGHMAEVRRKS 257 Query: 251 LTLGL--RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLV 308 + G +N ++ + ++ + R P+ LW M++ + + L CP+I+T + Sbjct: 258 VVFGAVPEKNEKDERVAMRSYGVMRYPKRKQLWEMSEVVGAMFDDSLQYPCPYIITCGIY 317 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 D +T + A +K+ ++ S++S AK+ P E+GE+ Q SVV + N Sbjct: 318 TLDANQTETMARVKHARAKQNSQSSMAKFQP-------EYGEIEQDW----ESVVFHTSN 366 Query: 369 ITAFCKDNNETALEVEQDILNSFRK--------NGFELISPRFNHMRNFLTCLPFMAGKG 420 A C+ + L D ++S+ + N F +I+ F + P K Sbjct: 367 GGAMCEMYHIITLIAPVDKIDSYSQTAINIWSSNKFNIIALDFLQLAALYVSCPMTLNKS 426 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN 479 LK+ V+ + N ++ PL+ + + ++ + FID F + N Sbjct: 427 TRDDLKKLKVMTTKTTINAIDMSPLIGEWQGVGDPVVMLFGRKGTPCFID--FYANTDGN 484 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETL 536 YN+ VCG SGAGK+ L+ ++ + G + D+G +K+ + G D G +L Sbjct: 485 YNLYVCGVSGAGKSVLLLEILAAYRAVGAKLFILDVGRSFKNFVDLAKGTTFDFNSGRSL 544 Query: 537 RFNPFANITDIDQSAE--------RVRDQLSV---MASPNGNLDEVHEGLLLQAVRASWL 585 NP++ I ++ E +R L + MASP +L++ E LL +A+ A+W Sbjct: 545 CMNPWSWIQVAEEEEEGGLNTFQQELRMLLPIYAKMASPKNSLNQFQEALLEEALSATWR 604 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 N +D+V +L D + E+ L +T NG YG YFN + + Sbjct: 605 EYGNENNVDNVQAYLLQIKDQ----GGQQVDRVAFELGKQLQAFTTNGMYGSYFNG-KAN 659 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + D ++ LEL L+D P+L VMF + I MY T R+ KKL IDE W+LL Sbjct: 660 ISFDNDVIYLELEELKDAPALRSVVMFCVTSRIMKEMYLT-RDRKKLCFIDEAWQLLG-D 717 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + + +FIE+GYR AR++ G + TQ I D ++AS RAA+ N+ +KI L+Q K Sbjct: 718 DAETAKFIEEGYRRARKYNGIFGIGTQGIDDAFKNEAS---RAAYTNADWKIFLRQDEKN 774 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSD 825 F + F P + +I + ++ ++ R D S AM S++ Sbjct: 775 FQELIDSKKVSFSPYMQRLIKSLRKI-NGMYAEMIISSPRGEHLLRHIPDEFSLAMASTN 833 Query: 826 GPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 D+ + K G + +A+ QL +K Sbjct: 834 AKDYTRLDNLMKGGYTTIQAIEQLLKEK 861 >UniRef50_C5ANL2 Putative uncharacterized protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANL2_BURGB Length = 866 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 211/843 (25%), Positives = 371/843 (44%), Gaps = 61/843 (7%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLM 101 +LLPY Y+ + L+ N +++GF+L P GAN+ + L + T +P + ++ Sbjct: 50 QLLPYDQYDPATELYYNTSSIGFVLVVAPQTGANDELARTLLGLYDT-MPADHGVQWMML 108 Query: 102 SSQLVGDRIEYGL---REFSWSGEQAERFNAITRAYYMKAAATQF-PLPEGMNLPLTLRH 157 + ++ + ++ + R ++ SGE + A Q PL G N +T + Sbjct: 109 ADPIIEEHLDRYVDLRRTYANSGEAPPFYLEQAERRAAALRANQGRPLFHGQNYSITDK- 167 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV-------- 209 R+ +S EM+NL +++ A+L+ AS+ ++T I + Sbjct: 168 -RLMLSVVRKGSADDAKVREEMQNLREVVGATLRSASLASRTATPDDLIRFLWPILNPEY 226 Query: 210 -----GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR-ENGRNST 263 E+++ DS P R QL P+ +V+A++L GL E + Sbjct: 227 LFGNGAEVVDQQYDSDRPIRDQLVPFG----------HHARVKAEHLLFGLPPEEKGDPD 276 Query: 264 ARIL--NFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANL 321 RI +F + + P LW M + +L N CP+++TL ++ DQ + A L Sbjct: 277 KRIAARSFGVLQYPSKKELWEMGNIVGSLFNDVHQYPCPYLITLGVMTLDQNAVETRAAL 336 Query: 322 KYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC-KDNNETA 380 + + +K+ A P + + ++W + +L SG S+ + +T F +D E Sbjct: 337 RGARAAQNAKSKMAPLQPELALQDRDWRAVGLQLESG-GSICELYHTLTLFAPRDGIERC 395 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 + + I S R F +++ + L+ +P L L + ++ + N Sbjct: 396 VAAARGIWRSERFKLFPMVT---QQLTTLLSAMPMALTPDLRDDLNKLRLISTKTTVNAT 452 Query: 441 NLMPLVADNPLTPAG--LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 ++ P+VA+ T LL R A ID++ + TNYN V GT+GAGK+ L+ Sbjct: 453 DMAPVVAEWGGTRGAPSLLFYGRRGTPALIDLY---SSPTNYNGFVDGTTGAGKSVLMNE 509 Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI-----TDIDQS 550 +I + GG V D+G Y+ GG Y+D + NPF++ IDQ Sbjct: 510 IIAAFRSVGGIVRVCDVGYSYEKQISLAGGQYIDFKPNSGIVINPFSSAGFDPENGIDQE 569 Query: 551 AERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYA 610 + +R ++ M SP +++ LL AVR W V L + D + Sbjct: 570 VKFIRPIIARMVSPTAPIEQFEGALLDLAVRQVWQDYGRDGSPTLVSKALLSLKDQNKRP 629 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAV 670 E E+ V L + G YG+Y N ++R D +++ LEL L P L + Sbjct: 630 ERVAY-----ELSVRLGPFCDGGVYGRYVNGPT-NVRLDNEIIGLELEHLNSDPDLRTVI 683 Query: 671 MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 + L + N MYR R+ KKL + DEGW+++ + + EF+E+GYR AR++ G++ Sbjct: 684 LLGLTNQVTNEMYRFDRSRKKLFLTDEGWQVVG-DDKETAEFMEEGYRRARKYEGSFFFG 742 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 TQ I D K + A +AA+ S++K + Q K + P + M+ Sbjct: 743 TQGIGD---TKLNRAIQAAFDFSAWKFHMAQGKDAIPKIEREKSIDLSPSLKKMLSSLAP 799 Query: 791 AKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLA 850 ++ L+ R + + AM ++ GPD+ F+Q+ ++G+S +A+ L Sbjct: 800 YPGRYSEFVLVDPNGDEHLLRHIPEEFTLAMATTKGPDYNFMQRLIQQGVSTEDAIRSLI 859 Query: 851 WKK 853 K Sbjct: 860 EHK 862 >UniRef50_A4XE86 Type IV secretion/conjugal transfer ATPase, VirB4 family n=10 Tax=Sphingomonadales RepID=A4XE86_NOVAD Length = 868 Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 222/873 (25%), Positives = 380/873 (43%), Gaps = 89/873 (10%) Query: 24 ESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALD 83 ESA + P S LPYR Y+++ GLF+N ++GF+LE P+ GA+E E L Sbjct: 17 ESAHPEAERPVLGAPMLSNWLPYRSYDKKHGLFINTDSLGFILELAPMMGADERSGELLT 76 Query: 84 HMLRTKLPRGIPLCIHLMSSQLVGDRI-EYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 L +P G + + S VG+RI ++ + G A+ RA +++ AA Sbjct: 77 QFLSDAVPSGCEIQLIHWQSPSVGERIADWVMPRVVAKGVYGR--AAMHRARWLRRAAW- 133 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ---T 199 + + P LR+ RV +S + AD L ++ + +LQ SI + Sbjct: 134 --MSISRDAPFYLRNTRVILSVGARLSGPIGADTL--ASVRDSLHGTLQSLSIPARDMGP 189 Query: 200 VDAQAFID--IVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL---- 253 V+ AF+D + + N + Y +LDP +N QCV + +V D + L Sbjct: 190 VELIAFLDDFLCPAVDNADKPEHY---SELDP---INVQCVRRDLETQVTPDRIVLQTER 243 Query: 254 ----GLRENGRNSTARIL------NFHLARN-PEIAFLWNMADNYSNLLNPELSISCPFI 302 G R++G ++ F RN P+ W++ +++N +L C + Sbjct: 244 FRPTGERQDGAPVIGEVVPDKFDWRFFSVRNLPKQWAPWDVQKIIGDVINDKLRFGCNVM 303 Query: 303 LTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 L LV +D+ S A LK M + + A++ P + ++ EW ++ + G+ Sbjct: 304 TVLGLVYQDEEAVASRAGLKVMRTTSLADSRSARFLPQLSEQRDEWQYVQAEIRQGRKLA 363 Query: 363 VSYFLNITAFCK----DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 Y+ + A D NE ++ + ++ G++LI R+ + L +P Sbjct: 364 QVYY-GVGALSPLGKGDINERMVK------SVYKACGWDLIDERYLQVMGLLAAMPLSLP 416 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNP--LTPAGLLAPTYRNQLAFIDIFFRGMN 476 GL LK + + A++ PL ++ P LL R Q F F Sbjct: 417 NGLSADLKRMKRFKTMLTTTAASIAPLQGEHTGGHIPHVLLI-GRRGQPFFWSPFQNAAG 475 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---G 533 N+N+AV G SG+GK+ +Q + ++ +G +V D G ++ + + GG +++ Sbjct: 476 --NHNVAVFGKSGSGKSVFLQDVCAAMSGAGAKVIVIDDGRSFEHMVKAFGGAFVEFKLS 533 Query: 534 ETLRFNPFANI------TDID------QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR 581 NPF I +D D + ++ + MA L + GL+ AV Sbjct: 534 SGFSLNPFDMIDGEALASDEDGEDYEVECLAMLKSIVGQMARQQDRLSDTERGLIDSAVS 593 Query: 582 ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 W K+ IDDV L+ SP D M + GTYG++F Sbjct: 594 TVWREKQRHGTIDDVAAALRALP-------SPYAGDLADAM----SPFLKGGTYGRFFEG 642 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRL 701 S+ A + V EL L +P L + +L+ M R++ KL +IDE W+L Sbjct: 643 -ACSIDLSAGLTVFELSDLSSKPELRSVALTALMFLTLRVMRDLDRSVPKLTMIDEAWQL 701 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 L ++G+ IE RT R++ G+ IT TQ++ DF S + AA NS + I+L+Q Sbjct: 702 L--GGGQMGQAIETYARTCRKYGGSLITATQSLNDF---YKSEGSLAALENSDWSIVLQQ 756 Query: 762 ---SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 + + AK+ + D + + + G +S L++ + RL +DP S Sbjct: 757 KEETINDLAKHQRFEMDHYTESLLRSLKRNGTE----YSDVLIKGPETLAVGRLVLDPYS 812 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 +YSS F ++ K + GL++ +A+ ++A+ Sbjct: 813 ATLYSSSPRVFSEIEDKVRGGLALPDAIERVAF 845 >UniRef50_D0Z4T2 IncF plasmid conjugative transfer pilus assembly protein TraC n=4 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T2_LISDA Length = 692 Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 178/688 (25%), Positives = 310/688 (45%), Gaps = 58/688 (8%) Query: 44 LPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI--PLCIHLM 101 LPYR Y+ ESGLF N +T+GF + + GAN+ +V AL+ ++ +LP G L Sbjct: 28 LPYRYYDDESGLFENQSTLGFGKKLNVLGGANDELVAALNELV-MRLPEGKNWDFQFVLT 86 Query: 102 SSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVF 161 VG I+ + S G E+ Y AA + G + L++Y Sbjct: 87 GDNQVGHIIDSNYEQASVRGGIVEKIAQNQAIYAHYAARNGYNTKLGPSYRFDLKNYNAS 146 Query: 162 ISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLY 221 +C+ S+AD + +L + + I Q ++ ID V + +N N Sbjct: 147 F-FCT-----SKADRETVSDLKTTLDYAFVQTGIDHQPIEPHDLIDNVSQALNFNSARNT 200 Query: 222 PKRRQLDPYSDLNYQCVEDSFDLKVRADYLT--LGLRENGRNSTARILNFHLARNPEIAF 279 PKR + L+ Q +E + + Y+ + R++NF L R P Sbjct: 201 PKRPHYNEDELLHSQMLELDSEFLIHKKYIESRCSFAHQDEVAHTRVINFTLRRLPSEFR 260 Query: 280 LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP 339 L++ ++ ++L N ++ CPF ++ +E K + K +L K + + A + P Sbjct: 261 LYSFSNCLASLRNAANALRCPFRISCNFQIEPTGKEKVKNEGKIRNLSKWAHSPMAIFIP 320 Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC-KDNNETALEVEQDILNSFRKNGFEL 398 + +KE +E EL+ + + S IT F K+N + + + + F + G + Sbjct: 321 TAKKELQEREELQDAFLREECKIASMVFTITLFSNKENMKADMASARGV---FSEAGLPI 377 Query: 399 ISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLA 458 + + L LPF + ++AG V++ ++ N+ N P+VA+ G+L Sbjct: 378 VEADMIQGQTLLASLPFNM-IDFYDDCRKAGRVRQIKTSNLVNFFPIVAEYKRIMGGMLL 436 Query: 459 PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDG 518 PT R+Q+++ D F M+ NYNMA+ G SG+GK+ + Q + RSV + GG + D GD Sbjct: 437 PTMRHQISYFDPF--NMSTDNYNMAITGVSGSGKSFITQNIARSVFERGGKVWILDKGDS 494 Query: 519 YKSLCENMGGVYLDGETLRFNPFANITDIDQSA--------------------------- 551 YK + M GVY+ ++ NPF +I ++Q A Sbjct: 495 YKKFTQTMSGVYMTAGSVFLNPFTHIATVEQKAGISFSEASNLKPSEGHDDDDVHPLASI 554 Query: 552 -ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYA 610 + ++ MA+PN +L++ + L A+ +W + ID V + L + A Sbjct: 555 LGDITGLIASMAAPNTDLNDTLDSALSDAILRAWDRHKQNTLIDHVQEALF------ELA 608 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDRPSLLVA 669 + R+ ++ L++Y +G YG FN +PS D D + +EL G D ++L Sbjct: 609 KERDDDRRISDLGHQLNKYCTDGIYGDIFN--KPSQLDPDVHLTTIELEGFTD--NVLRP 664 Query: 670 VMFSLIIYIENRMYRT-PRNLKKLNVID 696 V+F+L++ I MY R + K+ +I+ Sbjct: 665 VIFALMVSINQAMYLAGERRIPKVCIIE 692 >UniRef50_B2I3Z2 Type IV secretory pathway, VirB4 component n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Z2_ACIBC Length = 908 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 213/881 (24%), Positives = 379/881 (43%), Gaps = 85/881 (9%) Query: 42 RLLPYRDYNQESGLFMND-TTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHL 100 ++ Y +N + L+ ND ++ F LE IP G+NE V + ++ + P + I Sbjct: 49 QIFKYNMFNVKRSLYYNDGPSVSFALEIIPQTGSNEDFVSRIVSII-SSFPAETGIQILN 107 Query: 101 MSSQLVGDRI-EY-GLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE-GMNLPLTLRH 157 + + D + EY LR + + F +K ++ P+ G + ++ Sbjct: 108 FGNTIFEDDLQEYLDLRVAEYQNGKVSDFAIEFAKNRIKHIQSRKGRPQFGRDSYYVIKK 167 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP 217 ++ +S K I +ME L+ A LQ A + + + I+ M++ P Sbjct: 168 PKIILSVTRSGSYKDPQLIKQMEELLHQTSAQLQQAKLPNIVLTPMLLLKIIKPMLD--P 225 Query: 218 DSLY---PKRRQLD---PYSDLNYQCVED-SFDLKVRADYLTLGLRE-----------NG 259 +SL+ P + Y +Y +E L R T+G+ E G Sbjct: 226 ESLFRTVPPEHEFQVSRSYYSEDYNRLESIKSQLTPRGHSATVGVSEIVFGQPIIDKTKG 285 Query: 260 RNSTARIL----------------------NFHLARNPEIAFLWNMADNYSNLLNPELSI 297 N + R+ F + R P+ L+ M + + L Sbjct: 286 TNRSVRVYDSEWIEEDDDEDLEEDNRIAFRGFGVMRYPKFKHLYEMGNVIGDFFENSLQY 345 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 CP+I+++ + + D+ + ++A +K + +++ AKW P + A++W + L Sbjct: 346 PCPYIISMGIHILDKTSSETKARIKQARSTQNAESKMAKWQPEYAEIARDWNAITYHLHK 405 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 G + + I F + + D N ++ NGF ++ + + +P + Sbjct: 406 G-GGMCELYHTIGIFAPRSQLDSYSANVD--NLWKSNGFSVMPLSCLQLPLLYSSMPMIL 462 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMN 476 K LK+ ++ + N ++MP++++ ++ R F D+F Sbjct: 463 TKKARDDLKKLKLITTKTTINAVDMMPILSEWQGFGKPVIMVFGRRGTPCFFDLF--SNK 520 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV-VFDMGDGYKSLCENMGGVYLD--- 532 NYN +CGTSGAGK+ + I + S GF + + D+G +K+ G +D Sbjct: 521 QGNYNFYICGTSGAGKS-VFSLEILAAYKSLGFKIYIIDVGRSFKNFVALGKGQAIDFAK 579 Query: 533 GETLRFNPFANITDID---------------QSAERVRDQLSVMASPNGNLDEVHEGLLL 577 E + NPF + I+ Q + + + MASP+ LD+ + LL Sbjct: 580 REKICMNPFTWLEVIEDEELSEKEGTLNTFAQEMKMLLPMYAKMASPSKPLDDYDKALLS 639 Query: 578 QAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQ 637 +A+R +WL N +D + DFLK D ++ I +R + L+ + NG YG Sbjct: 640 RAIRETWLKFRNNNGVDQISDFLKEIRD-----QNGNIDARGWALGTQLENFKTNGMYGS 694 Query: 638 YFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE 697 YFN + ++ + +M+ LEL L+D P L V+F ++ I MY + R+ K+ +DE Sbjct: 695 YFNG-KANIDMNNEMIYLELEELKDSPELKTVVLFGVMNRIMRDMYLS-RSQGKIVFVDE 752 Query: 698 GWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKI 757 W+LLD + FIE+GYR AR++ G++ TQ I A+ AARAA+ +S +K Sbjct: 753 AWQLLD-DTEETAAFIEEGYRRARKYFGSFGMGTQGID---DAFANDAARAAYNSSDWKF 808 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL 817 L+Q + F K Q F I + W+S ++ N R DP Sbjct: 809 FLRQDEQSFEKLLQEKKANFSEAVIKQIKSIESIHG-WYSEIMVTSPNGQHIVRHVADPF 867 Query: 818 SRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 S AM S++ D+ F+++ +G+S+ EA + L KK E+ Sbjct: 868 SLAMASTNKDDYNFIEECTNKGMSMTEATYALMRKKEAEEV 908 >UniRef50_Q1N8Z9 ATPase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z9_9SPHN Length = 862 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 212/871 (24%), Positives = 386/871 (44%), Gaps = 90/871 (10%) Query: 28 ANEVLGEMSFP-----QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEAL 82 E L +S P +FS LPYR Y++++ LF ND ++GF+LE P+ GA+E + +L Sbjct: 20 GGEELASVSLPMPDVEKFSGYLPYRSYDRDTELFYNDASVGFVLEIAPLTGADERVHTSL 79 Query: 83 DHMLRTKLPRGIPLC-IHLMSSQLVGDRIEYGLREFSWSGEQA-ERFNAIT--RAYYMKA 138 + + L +P C H++S RI ++E+ + A + F I RA ++ Sbjct: 80 NQIFSDIL---MPGCDFHVVS--YASPRISKVVQEWCYPRYLAGDVFAKIANYRAGHLAR 134 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 A + +G P R++R S ++ SR + ++ + + + A T+ Sbjct: 135 GAWKSMAGDG---PFVTRNFRTVFSVS--VRQGSRVNKRDLLTIRESLIAHFSAIGTPTR 189 Query: 199 TVDAQAFIDIVGEMINHNP----DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL--- 251 T + E+ + D+L+ LDP +N QC+ F++ + D + Sbjct: 190 TFTPIELMQFCDELTTPSTGTGDDALH--YSDLDP---INVQCIRPDFEIAIERDRILTR 244 Query: 252 TLGLRENGRN-------------STARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 + LR GR S+ + + PE W+ ++ NP+L+ Sbjct: 245 SQSLRMTGRTLHDGVPELGIFTPSSFDVRALVVKNYPERFAAWDGQQLIGSIFNPKLNFG 304 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 CP + V D ++ + A LK++ ++ ++ P + ++A EW + + G Sbjct: 305 CPVAMVFQGRVLDDTESATRAGLKHVRSKQLAEGKAVSLIPHLSRQAAEWENVASLVRVG 364 Query: 359 QSSVVSYFLNITAFC-KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 +V F NI +D+ E L + + ++ G++L ++ ++ + P Sbjct: 365 H-RLVQGFYNINVISPRDSAEENLRTVKAV---YKAAGWDLSDQLHINIMSYCSMFPMNI 420 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVAD--NPLTPAGLLAPTYRNQLAFIDIFFRGM 475 GL L + + + N A P+ + P +L R Q A+ F Sbjct: 421 SSGLGDMLSRMKMQRTMVTTNAAAFAPMHGEFLGGNLPHMMLV-GRRGQPAYWSPFQN-- 477 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--- 532 N N+N A+ G SG+GK+ +Q L S++ SG A++ D G ++ C+ +GG +++ Sbjct: 478 NEGNHNTAIFGKSGSGKSVFLQELCVSLVGSGAHAIIIDDGRSFEHTCKALGGRFIEFTL 537 Query: 533 GETLRFNPFANI------TDIDQSAERVRDQLSV---MASPNGNLDEVHEGLLLQAVRAS 583 L NPF I TD D + + +S+ MA L + +G++ +AV Sbjct: 538 SSGLSVNPFRMIDADLAATDEDYHVDCLAMLMSIIGQMARHEQRLSDFEKGIIDRAVNQV 597 Query: 584 WLAKENRARIDDVVDFLKNASD--SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 W + ID V+ L N D +Q A S L+Q++++GTYG++F Sbjct: 598 WNDMGSNGTIDAVITALVNDDDPVGQQIATS-------------LNQFSSSGTYGRFFIG 644 Query: 642 DEPSLRD-DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 D S+ D V EL L R L AV+ S++ M ++ R + K IDE W+ Sbjct: 645 D--SIIDLTNPFTVFELSDLASREDLRSAVLTSIMFLASQYMRKSDRTIPKALFIDEAWQ 702 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 LL K + +F+E RT R++ G+ IT TQ+I D+ S +RAA NS + ++L Sbjct: 703 LL--KGGSMAQFVEIYARTCRKYYGSLITATQSINDY---YKSDGSRAALENSDWSVVLA 757 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA 820 Q + + +++ + +I + +S ++ + RL +D S A Sbjct: 758 QKPETIGELSRMGRFELNEFTNALIRSL-KRQGTDYSDVFVRGPDTEFVARLVLDKFSSA 816 Query: 821 MYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 ++SS F ++ ++G+S+ +A+ +A+ Sbjct: 817 LFSSSPKVFAEIEALHRQGMSMADAIETVAF 847 >UniRef50_Q1RJF1 Conjugative transfer protein TraC n=35 Tax=Rickettsieae RepID=Q1RJF1_RICBR Length = 862 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 217/868 (25%), Positives = 382/868 (44%), Gaps = 125/868 (14%) Query: 46 YRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRT--KLPRGIPLCIHLMSS 103 Y Y++ES LF N ++GF+L P+ G + + L++ LP G I ++ S Sbjct: 39 YESYDEESSLFFNRASVGFVLLGWPLVGTSLQAQGEIAEFLKSDENLPAGSSFQILMIGS 98 Query: 104 QLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFIS 163 + + ++ +W Q R I + + T+F L + ++ + IS Sbjct: 99 DHIREYLD------NW---QLHRKGTIFAE--LSSRRTKF-LEQKAKAEGNIKDVVLLIS 146 Query: 164 YCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPK 223 P+ DI EM ++++ + + + T V+A + V +I + +P Sbjct: 147 VTIPTLT---IDINEMIRRREVLQDTFKSIGLATYNVEATLLLKFV-RLIFGWREEEHP- 201 Query: 224 RRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNM 283 +L+PY L+ Q + +F L + DY++L N ++ + P L M Sbjct: 202 --ELNPYEILSEQILPGNFSLYEKEDYVSL-------NDNQIFISLEAGKRPAEWLLSAM 252 Query: 284 ADNYSNLLNPELSISCPFILTLTL-VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 N L + I F++ L +V +QV + A K LE+ K+FP++ Sbjct: 253 DLFLGNELRRDEYIRSNFLIHFGLQIVPNQVIAKTAAITKREALERNINAGMGKFFPNLA 312 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPR 402 EA++ L SG VV+ LN+ + K N A + R++G+ + + Sbjct: 313 SEAQDLAGAVACLQSGDR-VVNIHLNVIMWDKKNK--AKGAASQFCSQLRRSGWYFVPCK 369 Query: 403 FNHMRNFLTCLPF---------MAGK-------------GLFKQLKEAGVVQRAESFNVA 440 ++H+ L LP + GK G+ L G + + Sbjct: 370 YDHLAVVLASLPMQLVEAAPNSLVGKFNRFNNIFNKKTRGVGIALSNLGRGIKTIASESK 429 Query: 441 NLMPLVAD--NPLTPAGLLAPTYRNQLAFIDIF---FRGMN--------NTNYNMAVCGT 487 L+P++ + L+ G+L R Q+ + F G N N N+N+ + G Sbjct: 430 VLLPIIGEWKGDLSSPGMLLTGRRGQIMYWSPFGSALIGSNLYSTAATPNENFNLCIAGV 489 Query: 488 SGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANI 544 G+GK+ +Q L+ SVL +GG V D G +K C +GG Y++ + + NPF+ I Sbjct: 490 PGSGKSVFMQELMLSVLGTGGKVFVLDYGRSFKRTCLLLGGNYIEFDVKNPISINPFSEI 549 Query: 545 TDIDQSAERVRDQ----------LSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID 594 D S + Q L+ MA+P +++ + +L +A+ A W K N+ I Sbjct: 550 P-ADGSEGSIEAQADFLASFPSILATMAAPQYGTNDLQQPMLQKALIAVWQEKGNKVEIT 608 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 D+ D+L E YA+ E+ +L +T +G YG++F S + L +A +VV Sbjct: 609 DIADWL--LKREESYAQ---------ELGNMLFPFTRDGQYGKFF-SGKAKLSLNADIVV 656 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 +E L P+LL ++ +I++I M + R L +IDE W+LL K + GEFIE Sbjct: 657 IETDHLRSSPALLAVIVQIMIVHINQSMVKGDRKRPFLIMIDEAWKLLSGK--RSGEFIE 714 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 + R AR++ G+ TQ + D+ ++ S AA A+ NSS+K+ILKQ+ + F K + P Sbjct: 715 EAGRIARKYNGSITLATQQLTDYFREEGS-AAEKAFENSSHKVILKQNPESF-KAMRASP 772 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH----------------RLFVDPLS 818 K D+ + LLQ + + H RL +DP + Sbjct: 773 ------------KLAGFVDEDWKLNLLQSIHSNPPHYSEAAIYGPSVNGVVARLMLDPFT 820 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 + S++ D++ ++ + G+S+ +A+ Sbjct: 821 LMLTSTNARDYQAIEDRMIAGMSVTDAI 848 >UniRef50_Q3IUW4 TraC n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW4_RHOS4 Length = 827 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 212/836 (25%), Positives = 382/836 (45%), Gaps = 83/836 (9%) Query: 43 LLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPL-CIHLM 101 LLPYR ++ ES LF N + GF++E P+ GA++ + L ++ + P G + ++ Sbjct: 33 LLPYRLFDPESELFFNQNSTGFLIEVNPVVGADD-VASNLQAVINSNAPNGATIQFLNWT 91 Query: 102 SSQLVGDRIEYG---LREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 S + G + + LR E A+R A R LP H Sbjct: 92 SPDIDGQLVRWARHRLRGDELVMEMAQRRMAHLRGARFGTDHVIKALPH---------HR 142 Query: 159 RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPD 218 RVF++ C + E++N + + S+ G + + F+ +GE+++ Sbjct: 143 RVFVA-CWLDGDADLSQQKELKNFRRSLY-SVFGGEAYVRHLGPDDFLKFLGEVLHC--- 197 Query: 219 SLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENG--RNSTARILNFHLARNP- 275 R L SDL Y E++ + ++ LT+ G + + + R P Sbjct: 198 ------RGLVGISDLTYTA-EEALNHQLPGAGLTVQRTAIGLMGEPPMAVSSATVRRFPR 250 Query: 276 EIAFLWNMADNYSNLLN--PELSI---SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 E F+ + LLN PE + P + + T+ V + S K L+ + Sbjct: 251 EWQFVLGI------LLNGVPERIAERPAGPVLTSFTMRVRSKSDATSFLMKKRAGLQHTA 304 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 T +A++ + ++ E+ L Q++ G+ + + ++ + A+ K E A ++ Sbjct: 305 STQFARFATGLSEKMAEFEGLNQQVELGERLLDTTYV-VCAYAKGTAEDARHSLAEVAKI 363 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD-- 448 +R G L + F + FL LPF + LK+ ++ +S + L P+ + Sbjct: 364 YRYAGLVLENDTFVQLPVFLAALPFAVHGKRMEDLKKLQRMKILKSEAASALAPIHGEWT 423 Query: 449 NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 G+L + Q+ D F ++ NYN+AV G SGAGK+ +Q L+ S+ +GG Sbjct: 424 GSGNGRGVLLLGRQGQIMDWDNF---ASDGNYNVAVVGKSGAGKSVFMQELVTSIYAAGG 480 Query: 509 FAVVFDMGDGYKSLCENMGGVYL--DGET-LRFNPFANITDID--------QSAERVRDQ 557 VV D G +K+ E +GG ++ DG +R NPF+ ++ D + E V Sbjct: 481 RVVVIDDGYSFKNTVEILGGTFVGFDGSVQIRLNPFSMLSAEDMEKDEYRADAIELVTGI 540 Query: 558 LSVMAS----PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 ++ MA+ ++E EG + + V W K + DV + L+ ++ +Q Sbjct: 541 IASMAALGEGKQSRVEEFEEGRISRIVADVWAEKGAAGEVTDVWERLRAFAEEDQ----- 595 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 RL +++V L+ +T +G YG YF + +LR + V EL ++ + +L V+ Sbjct: 596 ----RLADVVVKLEAFTRSGPYGHYF-AGPATLRLETAFTVFELSDIKGQ-KVLQDVVLQ 649 Query: 674 LIIYIENR-MYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 +++++ M++TPR + +IDE W LL K+H FIE R AR++TGA IT TQ Sbjct: 650 IVMFLGTELMFKTPRAVPVAILIDEAWDLL--KSHATARFIEGVVRRARKYTGALITGTQ 707 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 +I D+ ++ A++ NS + ++L Q A+ ++L D+ L + + G+ + + Sbjct: 708 SIDDYYNNVAATVCLQ---NSDWTVLLAQKAETI---DRLVQDRRLSVSPHIAGQLKSLQ 761 Query: 793 D--QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 FS ++ N + RL +DP S A+YSS G E + + + +G + EA+ Sbjct: 762 SVKGLFSEMGVKGPNGWFFGRLLLDPFSLAIYSSKGSTVEKINRLKDQGYTTVEAI 817 >UniRef50_C5T9V4 Type-IV secretion system protein TraC n=5 Tax=Betaproteobacteria RepID=C5T9V4_ACIDE Length = 860 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 221/855 (25%), Positives = 370/855 (43%), Gaps = 77/855 (9%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCI 98 QF+ LPY Y + +F+N MGFMLE +P +GA+E + E L L P L Sbjct: 31 QFAGWLPYSAYLADEKIFVNRDGMGFMLEVMPQSGADERMAEVLVS-LYANCPPDTGLQF 89 Query: 99 HLMSSQLVGDRIEYGLREFS----WSGEQAERFNAITRAY-----YMKAA---------A 140 HL +S I + LR+++ +QAE+ R + K A Sbjct: 90 HLFASP----HIRHQLRQYTNLRVEDEDQAEKARPFGRPVPNENLFRKLARQRVQHLLHG 145 Query: 141 TQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKI---IRASLQGASITT 197 TQ L G + TLR +R+ +S P S AD+ E L+ + + A+L+ A + Sbjct: 146 TQASLTAGFHY--TLRDFRLMLSVAFPG---SAADLNRREALLALRDSMAATLRSAMLPN 200 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVR-ADYLTL-GL 255 + DA I+ + NPD + + Y D + +D +++ + D+ T+ Sbjct: 201 RVCDAADLINWCA--LFTNPDRIAHSDAEDLNYDDDRWLRYDDGREIRDQIVDFDTIQDP 258 Query: 256 RENG----RNSTARILN---FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLV 308 +G + ++A +L + + PE LW M +L+ P L S PF++TL + Sbjct: 259 HPSGITLWKETSAEVLEARFYSIKSFPERFALWQMGSLIGDLMQPALQYSAPFLITLGVH 318 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 V D T S ++ + +K+ A P V K+ +W + +G S+VS + Sbjct: 319 VLDPNATKSIITANHVRATQNAKSKMADVMPDVRKKLDDWSAAANAIDTG-GSLVSLYHQ 377 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 + F + + + + +R GF+L + + H + L LP K L + Sbjct: 378 LAIFTPPDKAASAHEAANAI--WRARGFQLNADAYMHRQALLASLPMTLTPRFHKDLAKM 435 Query: 429 GVVQRAESFNVANLMPLVAD--NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 V R N ++ PL+A+ TPA L+ R Q+ +D+F + NYN A+ G Sbjct: 436 RRVTRKTMANAIHMAPLIAEWRGTRTPA-LVFGGRRGQVMTLDLFDNDLG--NYNFAIIG 492 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFAN 543 G+GK+ L+ L S G + D+G ++ LC G Y++ + NPF Sbjct: 493 APGSGKSVLMNELAWSYRAIGAKVWMLDLGRSFEKLCRKAQGTYIEFRPDVDICLNPFTI 552 Query: 544 ITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNA 603 + DI++ + + +S M S LDEV + V W A N I + D K Sbjct: 553 VHDINEDIDMLVPGISKMCSMQHTLDEVQYKAISAMVLKLWRAHGNDLTITGLRDAFKTG 612 Query: 604 SDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR 663 + E R+ ++ ++L+ Y G Y ++F ++ +V+E L+ R Sbjct: 613 TIEELGVSGD---QRIKDLAIMLNPYARGGQYERFFEG-RANVDFSNDFIVIENEELKRR 668 Query: 664 PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE-GWRLLDF--KNHKVGEFIEKGYRTA 720 P L V L+ I MY T RN +K+ IDE +L D + +E+ R A Sbjct: 669 PDLHAVVNILLLHQITGEMYLT-RNRRKVLFIDELKQQLGDIGADDPIKAAVVEEAARRA 727 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ---SAKEFAKYNQLYPDQF 777 R++ GA T TQ+ D+ S+ AA+ S + +L+Q S + + +L D+ Sbjct: 728 RKYGGALGTATQSADDY---YGSAQMEAAFNCSDWVFLLRQKPESIEMLDRKGRLAMDE- 783 Query: 778 LPLQR---DMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQ 834 P +R + + GA FS + R +DP + ++S+ D + Sbjct: 784 -PKKRLLNSLRTEAGA-----FSELYISSPVGEGVARNILDPATHLLFSNKLEDNAPIDA 837 Query: 835 KRKEGLSIHEAVWQL 849 R +GLSI EA+ +L Sbjct: 838 LRAQGLSIDEAIAEL 852 >UniRef50_C5SIK7 Type-IV secretion system protein TraC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK7_9CAUL Length = 915 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 219/856 (25%), Positives = 360/856 (42%), Gaps = 81/856 (9%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 P S LPYR +++ L++ D T+G +LE IP+ G ++ L + LP G + Sbjct: 41 PSLSGYLPYRSFDEVRQLYVQDATVGLVLELIPLLGVTDAQHALLAQVFNDALPDGAHVQ 100 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 I +S G ++ R S GE E R + M T F + P ++R Sbjct: 101 IINYASPRTGHIVDSWARSRSAGGEIFEELARHRRQHLMNGIWTSF----SKSAPFSMRD 156 Query: 158 YRVFISYCSPSKKKSRAD--ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINH 215 YRV ++ A + E+ ++K AS+ GA+ T +F V +N Sbjct: 157 YRVILAIEVRGDVSGPAGDALAELREVIKGTLASMGGAAFTLMPDQLLSFCAAV---LNP 213 Query: 216 NPDSLYPKRRQLDPYSD---LNYQCVEDSFDLKVRADYLTLG------------LRENGR 260 ++Y PY LN Q V + D L L + R Sbjct: 214 TSSTVYDS----IPYDREDWLNQQIVRRDTTVTQYRDRLVATTAYAGDGYDQDLLPKGSR 269 Query: 261 NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELS--ISCPFILTLTLVVEDQVKTHSE 318 F R PE A +A + N +L S +L + + D+ KT E Sbjct: 270 RERWEFRAFSPVRYPENASQAVVARLIGDFFNNQLQNIGSNLTVLYFSPMTLDESKTTVE 329 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQ--RLGSGQSSVVSYFLNITAFCKDN 376 +K M +++ + AK+FP++++ A +W Q +G+ + + ++IT Sbjct: 330 --MKTMRTSQQASSPTAKFFPAIQRAADDWTAANQAVSMGAKLCHMGMFAISITPL---- 383 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAES 436 + A E+ + + GFEL H++ L LP G GL K ++R + Sbjct: 384 -QDADRAERQLRAVWGGAGFELSRSDVLHLQTLLAALPLTMGDGLADDYKAHKRLRRMPT 442 Query: 437 FNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFF---RGMNNTNYNMAVCGTSGAGK 492 +A L P + +L R Q F F GM N+N++V G SG+GK Sbjct: 443 SCMAMLAPFQGEFRGFQRPDMLFLGRRGQPFFFSPFSNEEEGMGGGNHNVSVIGASGSGK 502 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI----T 545 + L+Q + + G +V D G +++ C+ GG +++ L NPF+ + Sbjct: 503 SVLMQEMAGGLRGRGADVIVLDDGYSFRNTCKIQGGQFIEFNLSSDLNINPFSLVDYQEA 562 Query: 546 DIDQS--AERVRD-QLSVMASPNGNLDEVHE--GLLLQAVRASWLAKENRARIDDVVDFL 600 D+D+ +E + + +V+ G+ + E G++ +AV + K I+DV +L Sbjct: 563 DLDEEYRSESINALKYTVLQMAKGDDLYLKEELGMIERAVVEVFETKRAEGGIEDVALYL 622 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 E + P M + ++ Y G+YG+ +N + +L + V EL L Sbjct: 623 ------EAHFGDPG-----RAMAIAMEPYRLRGSYGKLYNG-QANLEISSPFTVFELSPL 670 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 E + L V+ SL++ I RM R KK IDE W+LL + G FIE R Sbjct: 671 ESKKDLRAVVILSLLMVIRQRMKHGGRARKKALFIDEAWQLLG--DGAAGPFIEGFARRC 728 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK---QSAKEFAKYNQLYPDQF 777 R+ GA IT TQ++ D+ + ++ RA NS + IILK +S FA L + Sbjct: 729 RKEGGALITGTQSLEDY---QRTAGGRACIQNSEWNIILKLKPESVDAFANEGILRASEA 785 Query: 778 -LPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKR 836 L L R + G +S ++ RL +DP S A+YS+ + +++ Sbjct: 786 ELELIRSLFTSQGE-----YSEAYIRGAGTKFIGRLVLDPYSLALYSTKPEVLDAIERLV 840 Query: 837 KEGLSIHEAVWQLAWK 852 G S EAV +A+K Sbjct: 841 SAGYSAKEAVRSVAFK 856 >UniRef50_B4RLR8 TraC n=10 Tax=Neisseria RepID=B4RLR8_NEIG2 Length = 858 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 211/853 (24%), Positives = 357/853 (41%), Gaps = 81/853 (9%) Query: 37 FPQFSRLLPYRDYNQESGLFM-------NDTTMGFMLEAIPINGANESIVEALDHMLRTK 89 F S L Y Y+ ++ LF MGF+LE P G ++ ++ L Sbjct: 33 FDHLSDYLNYGAYDTKTELFTLMSVKGDKPLGMGFILELNPFLGGSDDLIGKWGS-LYAL 91 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI---TRAYYMKAA------- 139 LP P+ + + S LR + EQ + I R+ + A Sbjct: 92 LPEKTPIQVQIFGSP--------DLRNYFKEYEQVQASRPIDDPMRSTFETLAKKRTEFW 143 Query: 140 --ATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITT 197 TQ L E N + LR+ R +S + ++ + +L+ +R SL+ I Sbjct: 144 NKGTQKVLVE--NTAIRLRNLRCILSVNLNIPPDNAVEVSKAVSLLARMRDSLRSMQIYG 201 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRR-QLDPYSD----LNYQCVEDSFDLKV--RADY 250 +T +A + ++N P+ ++ ++ ++DP D L+ Q +E +KV Sbjct: 202 RTWNADDLLAWTTLLLN--PNRMFTGQQDEIDPVWDETKFLSEQMIETRTSIKVLDSGSG 259 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 L G R G A+ + R PE L NM +++ ++ + PF++++ + Sbjct: 260 LRFGNRAAGDCVIAQC--YSANRYPEEFHLSNMGALIGDVIEANMNYTSPFLISMAMFKR 317 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 D + + LK ++ +++ A P K +++ + G G +VS + Sbjct: 318 DYDTSSNTVKLKAARAKQTAESKMAAVMPEAAKIKRDYDICLEAFGKGGGGLVSLLHQVV 377 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 + + N E ++ ++ GF L ++ + ++LT LP K + K L Sbjct: 378 IWERPENINL--AESQAVSIWQAQGFGLYRDQYLQLGSYLTALPMAIDKEVEKYLDSKKR 435 Query: 431 VQRAESFNVANLMPLVAD-----NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 N + P++ + P+ GL R Q ID+F N YN A+ Sbjct: 436 WSTKTMTNAVCMSPVIGEWHGLGRPVI--GLFGK--RGQAMGIDLFANPAGN--YNFAII 489 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFA 542 G SG+GK+ ++R+ + G + D+G Y+ C+ +GG Y++ L F PF Sbjct: 490 GASGSGKSFFANEIVRNYMGLGTQVWIIDVGRSYEKFCQMIGGQYIEFTYEAGLCFPPFQ 549 Query: 543 NITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD-FLK 601 +TDI++ E ++ S+MASP+ +L E E L + + W +D V + LK Sbjct: 550 MVTDINEDIEMLKLIFSLMASPSDSLTEQQEAKLQRIIEEVWYEFGQEGTVDHVRERCLK 609 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQ---YTANGTYGQYFNSD-EPSLRDDAKMVVLEL 657 P R M+ + DQ Y + G YG YFN ++D +VVLEL Sbjct: 610 CLITGSNEGGKPGERDL--SMVAVADQLYTYCSEGIYGSYFNGKLNVEFKND--LVVLEL 665 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 L+ +P L +M ++ I MY + R+ K+ +IDE W LL FIE+GY Sbjct: 666 EELKTKPDLQQIIMQLIMYRIMQGMYLS-RSQYKIMMIDEAWALLG-DTGTAARFIEEGY 723 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP--- 774 R R++ GA T+TQ D+ K AA AA N+ + L+ AK P Sbjct: 724 RRVRKYKGACGTLTQGANDYYKTK---AAEAALENADFVFQLRTGAKSLKTIQDKEPFEV 780 Query: 775 -DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQ 833 D + + R + +K ++S + RL+ DP + SS D E V Sbjct: 781 NDGIMQILRTL------SKTDYYSEIFVSTPIGYGVGRLYSDPFNVLASSSKAEDVEAVN 834 Query: 834 QKRKEGLSIHEAV 846 R +GL+ EA+ Sbjct: 835 HYRNQGLNTAEAI 847 >UniRef50_Q6MB95 Putative inner-membrane protein traC n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB95_PARUW Length = 828 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 193/845 (22%), Positives = 369/845 (43%), Gaps = 91/845 (10%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIH 99 S L Y Y++++ LF+N ++GF +E +P+ G++ + + + + L G + Sbjct: 42 LSAYLSYDVYDEDNELFINKKSLGFAIEMLPLVGSDHAAQKNIQSLFDEVLEEGESIQCL 101 Query: 100 LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYR 159 L + + + + W + ++ + + + T RH++ Sbjct: 102 LWTDHRIDPFLNF------WEEPRKQKGGIFAKIAHQRVK--------------TFRHHK 141 Query: 160 VF--------ISYCSPSKK--KSRADILEM-----ENLVKIIRASLQGASITTQTVDAQA 204 F +SY P K ++ A +++ E ++I+RA + A + + +D Sbjct: 142 QFFPSLFRFVLSYTVPFKGDLQTNAPLIQKMKAKKEKCLRILRALSRSARVW-KPID--- 197 Query: 205 FIDIVGEM--INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS 262 +D+VG M + + +++ P +PY L Q + L+++ G + R S Sbjct: 198 LMDVVGGMCQFSFSTEAVTP---LWNPYQSLASQ-IPRGTSLEIQE-----GQLKANRPS 248 Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 +F + PE L M ++ + CPF L + Q + ++ Sbjct: 249 PLAFKSFRVVDFPEFWSLSQMQHLIGDVERDSFRLLCPFYLHWAVHCPSQQLAEQKFKVR 308 Query: 323 YMDLEKKSKTS-YAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 +EK+ ++S + K P + E KE R+ + G V + N++ + + + Sbjct: 309 EKFVEKQGQSSMFLKMVPQLADELKEIQYARKEIYQGARYV---WTNLSVGIWSSPDNLV 365 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 E+ + FR N F L+ + + FL+ LP + + K LK + + N Sbjct: 366 HSEEILKGIFRNNRFTLVENQAFPLAAFLSALPLSLAESV-KGLKNLNFFRTTLNRECGN 424 Query: 442 LMPLVAD--NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 +PL + L +G+L R QL + F ++ NYN+ V G SG+GK+ +Q L Sbjct: 425 YVPLQGEWYGTLKSSGILLAGRRGQLMNWNPF--DNDHGNYNITVVGRSGSGKSVFMQEL 482 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFA-----NITDIDQSA 551 I + L +G V D+G + LC+ + G ++ T+ NPF N+ +++ Sbjct: 483 IFNGLGTGAKVFVLDVGRSFDKLCQALEGQMIEFSRQSTICLNPFTKFPLNNVNELNDCI 542 Query: 552 ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE 611 ++ ++ MA + L+ ++++ W K A + DV ++LK D Sbjct: 543 ILLKSIIANMADSINGMSSEQMSLIEESIKEVWKLKGCEASLTDVANWLKQHED------ 596 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 +++R ++ +L YT +G +G YF ++ V++EL L+++ L V+ Sbjct: 597 ---VQAR--KIGRMLFPYTIDGVFGHYFEGKN-NVDFTNPFVLIELEELKEKKELQAVVL 650 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 LI+ I ++ + R + +DE W LL + ++ G FIE R R++ G+ I T Sbjct: 651 QLLILTITDQAFLGDRKTRFYICVDEAWDLL--RANQTGPFIETLARRLRKYNGSLIVGT 708 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA--KYNQLYPDQFLPLQRDMIGKFG 789 Q + DFDS A+AA+ NS + L Q K A K P+ + ++ G Sbjct: 709 QQLEDFDS---YPGAKAAYANSDWACFLPQDDKTIATLKAESKMPEGKIQAIENLNTLHG 765 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 +S L+ S HR ++D S +YS+ DF +Q+ R++G S+ EA+ +L Sbjct: 766 V-----YSEVLICQGKSYSTHRFWLDSFSNLLYSTQAADFSRLQKLREQGKSLEEAIEEL 820 Query: 850 AWKKS 854 +K+ Sbjct: 821 VQEKA 825 >UniRef50_C4NVU8 TraC n=29 Tax=Gammaproteobacteria RepID=C4NVU8_ECOLX Length = 815 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 196/839 (23%), Positives = 367/839 (43%), Gaps = 67/839 (7%) Query: 32 LGEMSFPQFSR---LLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLR 87 L E P+ R ++P Y+++ +F M+D + GF P+ GA+E + E ++ L Sbjct: 9 LEETLIPEHLRAAGIIPVLAYDEDDHVFLMDDHSAGFGFMCEPLCGADEKVQERMNGFLN 68 Query: 88 TKLPRGIPLCIHLMSSQLVGDRI--EYGLREFSWSGEQAERFNAIT--RAYYMKAAATQF 143 + P L L S + + GLR+ G + E ++ R +++ T Sbjct: 69 QEFPSKTTLQFVLFRSPDINQEMYRMMGLRD----GFRHELLTSVIKERINFLQHHTTDR 124 Query: 144 PLPE---GMNLPLTLRHYRVFISYCSPSKKK--SRADILEMENLVKIIRASLQGASITTQ 198 + G+ ++ ++F++ P K + +++ ++ L + +SLQ + + Sbjct: 125 IFAKTNKGIYDNGLIQDLKLFVTCKVPIKNNNPTESELQQLAQLRTKVESSLQTVGLRPR 184 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN 258 T+ A +I I+ ++N PD+ + R +++ E FD + G+R Sbjct: 185 TMTAVNYIRIMSTILNWGPDASW---RHDSVDWEMDKPICEQIFDYGTDVEVSKNGIRLG 241 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 + A++++ + P++ + + +L SI +++ + + T + Sbjct: 242 --DYHAKVMS--AKKLPDVFYFGDALTYAGDLSGGNSSIKENYMVVTNVFFPEAESTKNT 297 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV-VSYFLNITAFCKDNN 377 K ++ K+ P + + + + L + + G V ++Y + + A K+ Sbjct: 298 LERKRQFTVNQAYGPMLKFVPVLADKKESFDTLYESMKEGAKPVKITYSVVLFAPTKERV 357 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 E A ++I +R++ FEL+ +F + FL CLPF + + L + ++ Sbjct: 358 EAAAMAARNI---WRESRFELMEDKFVALPMFLNCLPFCTDRDAVRDLFRYKTMTTEQA- 413 Query: 438 NVANLMPLVADNPLTPAGLLAPTYRN-QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 A ++P+ + T A RN QL + + +NTN N+ + SG+GK+ L Sbjct: 414 --AVVLPVFGEWKGTGTYHAALISRNGQLMSLSLH---DSNTNKNLVIAAESGSGKSFLT 468 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAER 553 LI S L G V D G Y+ L E + G ++ +G + NPF I + + + Sbjct: 469 NELIFSYLSEGAQVWVIDAGKSYQKLSEMLNGDFVHFEEGTHVCLNPFELIQNYEDEEDA 528 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD-FLKNASDSEQYAES 612 + + MAS G LDE L Q + W K ++DD+ + L+ +D Sbjct: 529 IVSLVCAMASAKGLLDEWQISALKQVLSRLWEEKGKEMKVDDIAERCLEEEND------- 581 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 RL ++ L +T+ G+YG+YF S + ++ + VLEL L+ R L V+ Sbjct: 582 ----QRLKDIGQQLYAFTSQGSYGKYF-SRKNNVSFQNQFTVLELDELQGRKHLRQVVLL 636 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 LI I+ ++ RN KK+ ++DE W LL K +V F+E YR R++ G+ + TQ Sbjct: 637 QLIYQIQQEVFLGERNRKKVVIVDEAWDLL--KEGEVSVFMEHAYRKFRKYGGSVVIATQ 694 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 +I D + + RA NS+ +L Q+ + + L L G F K Sbjct: 695 SINDLYEN---AVGRAIAENSASMYLLGQTEETVESVKR---SGRLTLSE---GGFHTLK 745 Query: 793 -----DQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 +S ++ ++ RL V + +YS+D D + Q K+G+SI EA+ Sbjct: 746 TVHTIQGVYSEIFIKSKSGMGVGRLIVGDFQKLLYSTDPVDVNAIDQFVKQGMSIPEAI 804 >UniRef50_Q8L274 Pilus biogenesis protein n=5 Tax=Gammaproteobacteria RepID=Q8L274_PROVU Length = 828 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 212/854 (24%), Positives = 363/854 (42%), Gaps = 91/854 (10%) Query: 39 QFSRLLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 +FS + P Y++++ LF + + + F P+ G+ + L +L + P + Sbjct: 15 RFSDVCPVNAYDEKNRLFTLENKYIAFGFVCRPLAGSTGKETDQLKTLLSSNFPPKTIVQ 74 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 L++S + +I + + E NAI +T +P+ + +R Sbjct: 75 WDLIASPNIVKKINQ-MDFLRINCEDPILKNAIYNRSKFLLHSTDYPMK---GVGTRVRD 130 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGA----SITTQTVDAQAFIDIVGEMI 213 + + P K EM NL R S + + + +++IDI+ ++ Sbjct: 131 CLLVCTVKIPIKANYEPKDEEM-NLFNEFRTSFDTSLGILGLAPSPLTRESYIDILASVL 189 Query: 214 NHNPDSLYPKRRQLDPYSDL--NYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 N ++ + R + DL + Q V+ +R+ Y+ G E+ + R Sbjct: 190 NQGENASWRDRSPVQVQDDLLVSEQLVDPDRSFFIRSKYVAFGNPEDEKQRGERQTETTF 249 Query: 272 ARNPEIAFL----WNMADNY--SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 R L W Y +L++ I I++++L+ DQ S K Sbjct: 250 IRTLSAKKLPTRFWPGQAQYYLGDLMSGATGIKSSCIISMSLIFNDQQSAKSTFTRKRAW 309 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYF-LNITAFCKDNNETALEVE 384 + ++S AK PS + + + L +L +G+ + F ++I + KD A + Sbjct: 310 VVQQSDGPMAKLIPSYKTSREGFDILADKLDNGEPVCRAKFTVSIFSNSKDGVFRASQEA 369 Query: 385 QDILNSFRKNGFELISPRFNHMRN-FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN-- 441 LN+++ F+++ P N + FL+ LP +F + V+ R + ++ Sbjct: 370 ASYLNTYQ---FKMV-PDTNFVAPIFLSALP------MFNEASAEKVIGRYRTLALSEAL 419 Query: 442 -LMPLVADNPLTPAGLLAPTYRN-QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 L PL AD T L T R+ Q+ ID+F ++TNYN + SG+GK+ L + Sbjct: 420 VLTPLYADWQGTKNPALMLTSRSGQIQMIDLF---DSDTNYNACIAAESGSGKSFLTNYI 476 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANI----------TD 546 I + G D+GD YK++CE GG YLD + N F I TD Sbjct: 477 ITAYRSLGAKVWCIDVGDSYKNICETYGGDYLDFHPDKKPCLNFFELIEDYFGEDPTNTD 536 Query: 547 IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD-FLKNASD 605 + + + L+VMA+P LD+ L + V + +D V + LK+A Sbjct: 537 GNGEEDLIIGLLTVMAAPQKGLDDFQTARLKEHVALLIREHGKQTTVDMVAESCLKDAD- 595 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF-NSDEPSLRDDAKMVVLELGGLEDRP 664 R+ ++ L +T+ G YG+YF + R+ VLEL LE Sbjct: 596 -----------RRVSDIGSQLYPFTSRGQYGRYFVGKNNIDFRN--PFTVLELSRLESSE 642 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 L V+ LI I+ M+ R+ K+ VIDE W LL +G+FIEKGYR R++ Sbjct: 643 HLKQVVLLQLIYQIQQDMFLGDRSQMKIVVIDEAWALL---KGNIGDFIEKGYRRFRKYK 699 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL---------KQSAKEFAKYNQLYPD 775 GA ITITQ+I D D S +A NS++ ++L Q++K A + Y Sbjct: 700 GAAITITQSINDIYKD---SVGKAIADNSAFMLLLGQGESAINEAQASKRLALDDAGY-- 754 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQK 835 +FL R G +S + + RL VDP S +YS+ D +++K Sbjct: 755 RFLKTVRSSSG--------VYSEVFVISKAGQGISRLIVDPFSLLLYSTHPDDVSEIRRK 806 Query: 836 RKEGLSIHEAVWQL 849 + GL+ +A++++ Sbjct: 807 KDGGLTTEQAIYEI 820 >UniRef50_Q2LTZ9 Sex pilus assembly protein n=3 Tax=Deltaproteobacteria RepID=Q2LTZ9_SYNAS Length = 844 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 204/847 (24%), Positives = 359/847 (42%), Gaps = 94/847 (11%) Query: 39 QFSRLLPYRDYNQESGLFMN-DTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 +FS LP+ Y+ E+ + N D T GF+ E P+ A E + L+ + R LP G + Sbjct: 42 RFSDYLPWIAYDGETEAYHNADGTKGFLWECSPLCFAGEKTLFTLEGLFRLGLPHGSVMQ 101 Query: 98 IHLMSSQLVGDRIEY----GLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 L + + IE R+ + E +E+F A +++ EGM++ L Sbjct: 102 FILHADSHIDPYIEAYRSGKTRDLAIVHEASEKFAA-----FLEKGV------EGMDIFL 150 Query: 154 T--LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 LR++R+F++ P +++ + L ++L I L+GA + + V A ++ + Sbjct: 151 KTPLRNFRLFVAVKFPEEREMK---LHAKDLSNSILEILRGADLYPRPVPPHALVEWMRR 207 Query: 212 MINHNP-------DSLYPKRRQLDPYSDLNYQCVEDSFD-LKVRADYLTLGLRENGRNST 263 +N P D P R+Q+ +SD +E S D +KV Y R +T Sbjct: 208 YLNDVPSPNNDAYDDSIPIRKQV-IFSD---TVIEKSMDRMKVGNRYF--------RCTT 255 Query: 264 ARILNFH---LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED-QVKTHSEA 319 + L N +W + + + I+ PF L +V + + K H++ Sbjct: 256 VKHYPKEVDPLQTNELFGGVWGVVSDANQ-------ITTPFFFALNVVFHNLKSKLHTKC 308 Query: 320 NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 NL L+++ S+A PS+ ++ E+ + G V + I D+ +T Sbjct: 309 NLV---LQQQGVGSFA---PSLMRKKDEYMTAVDEVEKGTPFV--RVIPILWVWGDSEKT 360 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR---AES 436 E + G+ + R FL+ LPF GL+ + + R A Sbjct: 361 VSESIVRAKRMWEAQGYVMQEDRGILPVLFLSSLPF----GLYDRDDNVDNLDRDFIAPC 416 Query: 437 FNVANLMPLVADNPLTPAG---LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 +VA +P+ AD + G L+ + Q +D+F R NN +N+ + +SG+GK+ Sbjct: 417 DSVAVTLPVQAD--FSGGGKPSLIFIGRKGQPCSLDVFDRHANN--HNIFIAASSGSGKS 472 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD-GETLRF--NPFANITDIDQS 550 L+ L+ + S + D+G YK + G +LD E R NPF N+ D Sbjct: 473 FLVNYLVYNYFASSALIRIVDIGGSYKKMTRLFGARFLDFSEQSRICMNPFTNVMDPAGD 532 Query: 551 AERVRDQLSVMASPNGNL-----DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNAS- 604 + + M + ++ E L+ AV+ +W + A ID V ++L Sbjct: 533 LPVIASIVLQMVYSSTDIVPEDTAETAMSLIKSAVKWAWRTEGADASIDTVYEYLSTFPE 592 Query: 605 -----DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 DS + RS + L ++T+ YG++FN + VVLEL Sbjct: 593 HAEEFDSCHENDIAAFRSLSRNLSFNLTEFTSGHLYGKWFNGTSDFNIAGDEFVVLELEH 652 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 L+ + L + +I + +Y + R+ + + DE W+ + + + IE+GYR Sbjct: 653 LKPQKELFKVITLQVINAVTQDLYISDRSRPRFIIFDEAWQFMQ-EGSSLKGVIEEGYRR 711 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLP 779 AR++ G++ ITQ+I+D + S NS++K L+ S + AK L + Sbjct: 712 ARKYGGSFTVITQSILDL--KQFGSIGDVIRSNSAFKFYLESSDFDRAKLEGLIEHEGFA 769 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEG 839 L+ I K + +S + RL VDP S +Y+SD + ++ G Sbjct: 770 LK---ILKSVRSNKPKYSEIFMDTPFGQGVARLAVDPFSYYLYTSDAAEIAEIESLVDNG 826 Query: 840 LSIHEAV 846 +S EA+ Sbjct: 827 MSYGEAI 833 >UniRef50_B7XGR7 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGR7_PSEPU Length = 821 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 196/837 (23%), Positives = 346/837 (41%), Gaps = 62/837 (7%) Query: 36 SFPQFSRLLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 S P+ S+L+ Y LF + +GF P++G+N + L L P Sbjct: 8 STPRLSKLINGLAYEPNLYLFQLEGNRLGFAFLCSPLSGSNGDEGDRLKAGLTVDWPEKT 67 Query: 95 PLCIHLMSSQLVGDRIEYGL----REFSWSG------EQAERFNAIT--RAYYMKAAATQ 142 + L+ ++ + + ++ G R F SG E +T RA Y + Sbjct: 68 TIQFSLICTENI-NEMKTGFLRLRRAFRESGRTDLPVETQALLEKVTNARADYFSDRTMR 126 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSP--SKKKSRADILEMENLVKIIRASLQGASITTQTV 200 P + +R + +S P + ++ + + L +R SL ++ + Sbjct: 127 ---PVDSISGVRIREQSLVVSVTIPIANALPTQTEANAAKELFDGLRTSLDSCNLAAVPL 183 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRRQLDPYSD--LNYQCVEDSFDLKVRADYLTLGLREN 258 ++ +I ++N P + + + + +D LN Q ++ + L V+ D+L +G Sbjct: 184 TNDSYREIFSSILNQGPTASWREDPDMKADTDKPLNEQILDYNRSLDVKKDHLQIG---- 239 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 + R P++ + + + +++L+ I I+ +TL Q++T + Sbjct: 240 ---EDCFVKTLSAKRFPDVMWQGDASQYLADILSQRGGIRGNCIINMTLYFPPQLETKDK 296 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 + + +S + P + K + + L + L G +V + + + F + N E Sbjct: 297 LSKRRQWSINQSFGPMVHFVPVLRKTKEAYDTLFEDLDKGLPNVQAT-MTLVVFGR-NRE 354 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 ++ + + F GF L+ +F + F+ LP A K+L + ++ Sbjct: 355 DLIQAASNAKSHFATQGFSLMEDKFCVLPVFVNSLPMCADPDAMKELFRFKTLSLTQALP 414 Query: 439 VANLMPLVADNPLTPAGLLAPTYRN-QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 L+P+ D T + RN Q +F ++TNYN + SG+GK+ Sbjct: 415 ---LLPIYGDWKGTGTHVAPFISRNGQPVSFHLF---DSDTNYNAMIAAQSGSGKSFATN 468 Query: 498 PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY--LDGET-LRFNPFANITDIDQSAERV 554 LI S L G V D+G Y L E G + D E+ L NPF I D + + + Sbjct: 469 YLITSYLSIGAKVWVIDVGLSYLKLSEAYKGDFARFDQESNLCLNPFELIEDYSEEEDVL 528 Query: 555 RDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 LS MA+P L + L + + W +D + D L D Sbjct: 529 VGLLSAMAAPTVPLIDFQTAGLKRHLTQCWETLGKTMIVDSIADSLLADPDP-------- 580 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 R+ ++ L +T+ G YG++FN +L VLEL L+ R L V+ L Sbjct: 581 ---RIQDIGHQLFAFTSKGQYGRFFNGKN-NLNFKNPFTVLELEELKGRQHLQQVVLLQL 636 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 I I+ MY R+ K+ +IDE W LL N VGEFIE GYR R++ G+ I ITQ + Sbjct: 637 IYQIQQDMYLGERDRPKIVIIDEAWSLLSQGN--VGEFIEHGYRRFRKYGGSAIVITQGV 694 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD--MIGKFGAAK 792 D +K A NS++ ++L Q A+ + + ++ LPL I K + Sbjct: 695 NDLYQNKVGQAIAE---NSAFTLLLGQKAEAI---DAIQENKRLPLGEGGYRILKTVKSY 748 Query: 793 DQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 +S + + RL VDP S +YS+ D + ++ G+ EA+ ++ Sbjct: 749 KGHYSEIFMLTPRGAGIVRLTVDPYSILLYSTAPEDVQAIRNYTLTGVPQDEAILRV 805 >UniRef50_Q4HPB0 Conjugative transposon protein TraG, putative n=4 Tax=Campylobacterales RepID=Q4HPB0_CAMUP Length = 837 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 200/846 (23%), Positives = 360/846 (42%), Gaps = 78/846 (9%) Query: 39 QFSRLLPYRDYNQESGLFMN-DTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 +FS LPY Y+ + ++N D + G + P ++ ++ +L +KLP + + Sbjct: 37 KFSDFLPYMSYDDKEKYYINNDNSYGAIFICSPRIMMGDTTATTIEEIL-SKLPDDMFIQ 95 Query: 98 IHLMSSQLVGDRIEY-----GLREFSWSGEQAER-FNAITRAYYMKAAATQFPLPEGMNL 151 L + + ++EY R + + + + +T YY K + + Sbjct: 96 FTLFGLKNINQKLEYYRSIHKQRAYKENNTLLHKAVDEMTEFYYTKTKESP-----STTM 150 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 L+ Y + IS S K DIL + +R L + Q ++ ++ E Sbjct: 151 TSYLKDYYLLISLKSDKKD----DILTFK---LTLRNILSSNKFSPQPLEPSVLKPMLWE 203 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + N N + R D Y LN Q + + + DY+ E + + ++ Sbjct: 204 IFNPNHNLRDIPR--YDEYCYLNRQLIHADTAICIHDDYM-----ECDKKTYISLIPQSF 256 Query: 272 ARNPEIA-FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 + ++ F + DN S L+ FI + + + N + +K S Sbjct: 257 PNSANLSEFGEKLGDNISRTLDTNQFKDTFFITCSAMRLPKKRAKQVSKNHTIILSQKFS 316 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 +T + K F +V +E+ EL R+ + S+ ++ +N+ +N E A + + I++ Sbjct: 317 ETFFRK-FAAVREES---VELLDRIDLRKESLYAFDMNVI-ISGENYEEAEKNARSIISY 371 Query: 391 FRKNG----FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + K G L H NF+ LP K + + S ++ +PL Sbjct: 372 WNKGGEHKALILCEALGIHQLNFIASLPMGINKEYVFDI--TAKYRSMFSDQISQFIPLE 429 Query: 447 ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 AD ++ + R Q+A +D+F +NTNYN + TSGAGK+ L+ L + Sbjct: 430 ADYKGVEPNIILFSRRAQIAGLDLF---SSNTNYNAYLVATSGAGKSVLLNMLAFNSYAR 486 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQSAERVRDQLSVM-- 561 G + D + + LCE + G Y+ + L+ FNPF++I + Q E + + LS + Sbjct: 487 GDRVFIIDQDNSFLKLCETIDGQYVALDPLKPMSFNPFSDIQNEAQLIEEL-EYLSALIY 545 Query: 562 ---ASPNGNLDEVHEGLLLQAV----RASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 +S N + + HE L+ A+ R + K N I D+ E + +S Sbjct: 546 MLGSSKNESESKKHEKLVKNALQDLLRELFKEKGNALEITDI---------KEAFIKSED 596 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 IR + + L + G Y ++ S + + +V E GLE L ++ L Sbjct: 597 IRFK--DFANQLGTFCKGGIYEKFL-SGKCEFNIKKEFIVSEFKGLEGHDDLRDPLIMLL 653 Query: 675 IIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 I +I MY +P RN K ++DE R L KN K+ +FIE+ YR AR++ G+ I TQ Sbjct: 654 IYHINQLMYMSPDRNSKIQIIVDEAHRFLG-KNPKMDDFIEQLYRRARKYGGSAILATQG 712 Query: 734 IVDFDSDKASSAARAAW---GNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ---RDMIGK 787 D + K +RA NS++KI +KQ+ N L + L ++M+ Sbjct: 713 FDDIYNAKEGGLSRAGITIVNNSAWKIFMKQTE---TSVNMLLKSEVFNLNEIDKEMLRS 769 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVW 847 K ++ +F++ E+ +RL +D + ++D D +++ GLS+ EA+ Sbjct: 770 ISTTKGEYSEAFIMTPEDVKLPYRLVMDRYFYYLTTTDPKDKAKIKELTDSGLSLEEAIS 829 Query: 848 QLAWKK 853 QL ++ Sbjct: 830 QLIQRE 835 >UniRef50_A4JTN9 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A4JTN9_BURVG Length = 819 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 201/853 (23%), Positives = 355/853 (41%), Gaps = 90/853 (10%) Query: 44 LPYRDY-----NQESGLFM----NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 LPY+ + ES +F+ ++ +G A P+ GA++S V+ L P G Sbjct: 23 LPYKKVTVQACDPESKVFLASDGSEHYLGACFVADPLKGADDSTVDKFRSALSMPFPPGT 82 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + I L++S D ++ L E + + R A+ A ++ Q + L Sbjct: 83 FVQIGLLASPDADDYLDAYL-EGKYHDNEVLRALALQHASLVRRGKDQALVTRSGVL--- 138 Query: 155 LRHYRVFISYCSPSKKK--SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG-- 210 L R+ I+ +P + + DI ++ + + A + T +DA+ ++ ++ Sbjct: 139 LNRQRLVITIKTPCARALPTDGDIAAARETADRVQEAFKAAELETLQLDAEGYLVLLRLL 198 Query: 211 ----EMINHNPDSLYPKRRQLD-PYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + +H+ D P Q+ P +NY +D +K N A+ Sbjct: 199 TKLWDHPSHHYDETRPINEQVYFPGDAVNY---DDPTTIKF-----------NDGAHYAK 244 Query: 266 ILNF-HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 +++ + + +A + +M + L N I+ P+ + LTL DQVK + Sbjct: 245 VMSVKYFPKRASLAIMNHMIGDPLGLSN---QITDPYYMVLTLHYPDQVKKVDWVKGRSS 301 Query: 325 DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVE 384 L + A P++ + L + G+ S+V N T F + L Sbjct: 302 MLNHQVFGPTAHMIPALGYKKHGMDVLIHDI-EGKGSIVCE-ANFTLFLFSRSREKLNKL 359 Query: 385 QDILNSFRKN-GFEL------ISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 L ++ + FE+ + P +N++ T + F + + VQ Sbjct: 360 VAGLQAYYTSLAFEIREDRRILEPLWNNLLPLNTSREGIKNLFRFHTMGISHAVQ----- 414 Query: 438 NVANLMPLVAD--NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 MP++ + LL T R Q A ID++ + TNYN V +GAGK+ L Sbjct: 415 ----FMPVIGEWTGSGRSGALLLVTRRGQPALIDLY---ESATNYNGVVFAEAGAGKSFL 467 Query: 496 IQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAE 552 Q ++ L G D G Y LC+ + G +++ L NPF I ++++ + Sbjct: 468 TQKIVSDYLAEGAKVWAIDAGRSYFKLCKAVKGTFVEFKQDSDLCLNPFTFIENLEEEMD 527 Query: 553 RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES 612 ++ L+ MA+P+ LD L +A+ + + A + V +F D + Sbjct: 528 ILKAMLAKMAAPDETLDAYPMSRLEEAITSVYTKYGKNATVKAVAEFCLAQPDEDT---- 583 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 RL + + A G Y ++F D +L D VVLEL L+ R +L V+ Sbjct: 584 ----QRLGKQLFPF----AGGAYTRWFEGDN-NLDMDNAFVVLELSDLKGRKALQQVVLL 634 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 L+ I M+ T R KK+ +IDE W LLD + +G+ +E YR AR+ GA + +TQ Sbjct: 635 QLMSRINYDMFLT-RGRKKILIIDEAWELLD--DPLMGKAMEALYRKARKEEGAVLIVTQ 691 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL--PLQRDMIGKFGA 790 +I D + S ARA NS+++ ILKQ+++ + QF P M+ Sbjct: 692 SIEDLYN---SPNARAIAANSAWQFILKQNSESID--GAIAGGQFKIEPYGAAMLKTVHT 746 Query: 791 AKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLA 850 ++ + + E+ RL VD ++ ++S+ + + G S+ +AV Q Sbjct: 747 VPGKYSEVMVKRSESEWGIFRLTVDRFTQVLFSTKNDERNAIFDAIDRGDSVVDAVHQFI 806 Query: 851 WKKSGPEMASLEA 863 + E A LEA Sbjct: 807 -DRENSEKAELEA 818 >UniRef50_Q5NX56 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX56_AZOSE Length = 815 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 173/751 (23%), Positives = 318/751 (42%), Gaps = 77/751 (10%) Query: 42 RLLPYR-----DYNQESGLFM-----NDTTMGFMLEAIPINGANESIVEALDHMLRTKLP 91 R LP++ ++ E+GLF + +G P+ G S+ E L LP Sbjct: 20 RRLPWQYLGAEGFDDETGLFYCVSPSGERHLGATFMTTPLLGGGGSVFEKFKAALACPLP 79 Query: 92 RGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNL 151 G + + L+ S I+ L ++ EQA +K P+ Sbjct: 80 AGSFVQVGLLGSP----DIDPYLDAYTDGKEQATGLLEKLVRTRVKMFQDAVHKPQFKTN 135 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG-ASITTQ--TVDAQAFIDI 208 + R +R+ + P S D+ E +++ + ++G +SI Q +D ++ + Sbjct: 136 GVLNRDFRLIFTVKIPCS--SLPDLEERQSIRSDVTRVMEGFSSIGFQFRMLDPHGYLHL 193 Query: 209 VGEMIN--HNP----DSLYPKRRQ-LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 + + + P D L P R Q P D+ ++ E F ++ Sbjct: 194 IRKFYHMWEKPEFSYDELIPIREQAFYPGDDIEFKENEILFHQGSDQEFFV--------- 244 Query: 262 STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANL 321 R+++ L + + N+ + + I+ PF T DQVK E Sbjct: 245 ---RVMSPKLFPKRTVFGVANLL--IGDQMGGANQITEPFFFQFTAHYPDQVKKKGEVRQ 299 Query: 322 KYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 ++M + ++ + A WFP + + + + + L++ F K+ + A Sbjct: 300 RHMWITQQCIGNSATWFPILGYKKEGIETFIHEIDGQGGMALEVNLSLMIFSKNRDRLAR 359 Query: 382 EVEQDILNSFRKN-GFELISPRFNHMRNFL--TCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + LNS+ F++ + + +FL LP A + + ++ Sbjct: 360 QTAS--LNSYLSTLSFDMREDK--RILDFLWHNALPMNASADAMTRTFRTNTMSARQA-- 413 Query: 439 VANLMPLVADNPLTPAGL--LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 A L+PL AD + A L T R Q++ ++ +NT YN+ V +G GK+ L Sbjct: 414 -APLVPLFADYKGSGANATSLFVTRRGQVSAFSVW---DSNTGYNVVVFAGTGGGKSFLA 469 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAER 553 Q +I L G V D+G + L + G Y++ + NPF +++ID+ + Sbjct: 470 QLVIVDNLAEGCKVWVIDVGKSFFKLNRALKGDYIEFSEESQIILNPFTFVSEIDEDIDI 529 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 ++ ++ MA+P G LD+ L + ++A+W + + + V + D P Sbjct: 530 IKATIAKMAAPEGGLDDYQMAALEEGIKATWDRYAHNSTVTAVAQWCMQQPD-------P 582 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 +R ++ L +T +G+YG++F E ++ + VL+L L+ RP L V+ Sbjct: 583 RVR----DLGQQLYPFTVSGSYGRWFEG-EATIDVSNRFTVLDLLHLKSRPILQKVVLLQ 637 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 L+ I MY TP +K+ V+DE W L+D + + + IE YR R+++GA I ITQ Sbjct: 638 LMNRIATEMYTTPG--RKILVLDEAWELMD--DPLMAKAIEALYRKVRKNSGAVIFITQG 693 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 + D S RA + NS+++I+L+Q A+ Sbjct: 694 VGDLFQ---SPNGRAIYANSAWQIVLEQRAE 721 >UniRef50_Q19NS3 TrhC n=11 Tax=Enterobacteriaceae RepID=Q19NS3_ECOK1 Length = 893 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 203/894 (22%), Positives = 355/894 (39%), Gaps = 133/894 (14%) Query: 49 YNQESG---LFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHL----- 100 Y+Q +G ++ +GFM P G ++ + L M + P I L Sbjct: 23 YDQLAGTHYFLIDGNRLGFMFICNPSPGVFDNQQDVLAEMFKMDFPTDTVCQISLTALPD 82 Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL-PEGMNLPLTLRHYR 159 ++ QL G R +A+ N YY ++ PL P+ NL LR ++ Sbjct: 83 LTLQLSAWSAVRGGRMTGNDKLKADLLNGYQLDYYDRSMHK--PLKPDHDNL--MLRDFQ 138 Query: 160 VFISYCSPSK-------KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 V+IS P + + SR D L E + K+I L VDA+ ++ + ++ Sbjct: 139 VWISLSIPLQSALPTELEHSRIDSLYSELVSKLITIGLHPFK-----VDAENWLYCIDKV 193 Query: 213 INHNPDSLYPKRR-QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 +N +S + + ++ LN Q V ++ + + + + + Sbjct: 194 VNPGKNSRWAEGFIDVNTMKRLNEQVNVPGRKYTVTENHFSSVTQSDDESEHRYFKQLSV 253 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 + PE M + N ++ +I PF++T T+ D +K E N++Y + K Sbjct: 254 VKFPEYVNFGCMYELVVNWMHGRKTIFSPFMITQTVQFADPLKLSKE-NVRYKAITNKQA 312 Query: 332 T--SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 + S + P + ++ + + L G + Y +T +N +++ + L Sbjct: 313 SIPSVVTFCPRLRDMDNDYMAVTRELEDGAKLLRGY---LTFTVMGSNANSVQTAANDLK 369 Query: 390 SFR-KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA- 447 SF ++ ++ F +F++CLP L + VV A++ P+ Sbjct: 370 SFYLESRVKVADDSFIVFPSFMSCLPMCNDPKTIFDLDRSEVVSNT---GAAHMTPIFGP 426 Query: 448 -----DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS 502 D P+ L + QL +DIF + +YNM + TSGAGK+ LI + Sbjct: 427 WKGNTDRPV----LSLVSREGQLMGLDIF---KTSASYNMVIGATSGAGKSFWTAYLINN 479 Query: 503 VLDSG---------------------------GFAV-VFDMGDGYKSLCEN-MGGVYLD- 532 L +G G V V D+G Y+ + E ++D Sbjct: 480 YLGAGPRSNNLVHYRSTFKHFLENEYPDDDPDGAQVFVVDVGRSYQGIAEQYTNSQFIDF 539 Query: 533 GETLRF--NPFANITDI------------------------DQSAER--VRDQLSVMASP 564 G+T F NPFA +TDI D+ A+ V +QL +MAS Sbjct: 540 GKTPDFTLNPFAFLTDITVNDDVFNEAPEFTGESTSNDAEKDKVAQTIMVLNQLKIMASE 599 Query: 565 NGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIV 624 G +D+ + ++LQ + + R + F E R+ ++ Sbjct: 600 KGLIDDYQQSVMLQLIAEEYQESRKSGRTGSITGFALRCKKHED--------KRIKDIGE 651 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR 684 L + G YG F P + D++ +VLEL L+ P L V+ S+I ++ M+ Sbjct: 652 QLGAWCEGGIYGHRFTDTLPPINFDSRFIVLELEELKGTPHLQTVVLMSIIQAAQHAMFI 711 Query: 685 TPRNLKKLNVIDEGWRLL---------DFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 ++L ++DE W + + N F+E +R R+ A I ITQ+ Sbjct: 712 KKDGRRRLFILDEAWEYIRPDNSSGAGNQSNQFFSSFLEAAWRRFRKTNCAGICITQSFE 771 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAK--EFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 D+ + SS RA NS +KII+KQ + E K N+ + +R + K Sbjct: 772 DYFT---SSVGRALTANSPWKIIMKQEKESIEAMKANKYFSTSDAEYER--MKNIRTVK- 825 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD-FEFVQQKRKEGLSIHEAV 846 + FS L++ EN RL+VD +++D D + + + +E S EA+ Sbjct: 826 KVFSEMLVRFENFQEICRLYVDRKMELCFTTDSADRSKLWEIQSRENCSYGEAI 879 >UniRef50_C4Z002 Putative inner-membrane protein TraC n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z002_9RICK Length = 925 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 204/923 (22%), Positives = 374/923 (40%), Gaps = 116/923 (12%) Query: 29 NEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM-GFMLEAIPINGANESIVEALDHMLR 87 N LG + F L Y+ Y G+F ND + GF+ E G+NE + + L+ Sbjct: 35 NNFLGAVPLKDF---LHYKSYVAGIGIFFNDDGIAGFLTEISMRVGSNELLEKNLNLFFN 91 Query: 88 TKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAIT--RAYYMKAAATQFPL 145 ++P G+ + ++ S + D+ + L + + IT R +++ A Sbjct: 92 NEIPEGVYMQFLVVGSNNIEDK--FSLWKKGRIAHNDPMLDRITKYREAFLRERARDIGN 149 Query: 146 PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQ-GASITTQTVDAQA 204 +G R ++ ++S CS LE+ K + T++ D Sbjct: 150 SDGR----IGRDWKTYVS-CSMRGVDGNNSKLELLVKFKEKLLKKFISIKLNTRSCDVAD 204 Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFD----LKVRADYLTLGLRE--- 257 +V +++N L + R +D S N +++ + L +D + G+ E Sbjct: 205 LKYLVNDLVNMQLTPLSSQER-VDTNSSDNSSHTKNNANKHNLLDRLSDQILEGINEASI 263 Query: 258 -----NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + ++L + PE + +M +LL P+L P L ++ + + Sbjct: 264 TEEEIKHLKTDLVTRGYYLKKLPESFGINDMV----SLLGPDLEGGFPARLIISYSIANN 319 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFP----SVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 + E + L +S + KW+ S++ EAK W L R +G+ + F Sbjct: 320 INKADEGKIISEGL--RSIHASEKWYTRHDISLQNEAKWWKVLIDRNKNGEKFLTENFQI 377 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 K+ E A E+ +L+ + F+L H+ L+ LP M +K LK Sbjct: 378 FITTTKNAVEIA---EEKLLSHYNSLDFQLARNDKLHLVGLLSILP-MQQAAFWKSLKFF 433 Query: 429 GVVQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 +V+ + V +P+ + + +G+L + ++ + F+R NYN+ V Sbjct: 434 QLVKNVPASEVVAKLPIHGEWKGINRSGVLLLGRKGEMFNWNPFYRVGGAGNYNVCVMAP 493 Query: 488 SGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF--------N 539 SG+GK+ +Q L S++ V D+G Y+++ E + + E LRF N Sbjct: 494 SGSGKSFFLQELATSLVTQNVQVFVLDIGASYQNIAEGLN----NSEFLRFNALNDLSLN 549 Query: 540 PFANITD--------------------IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQA 579 PF I I Q + L ++ S N N E+ E ++ Sbjct: 550 PFHGIIGSGAVYLEAQKLKREGKSKDAIMQRTGLTSEGLEILFSDN-NKQEIAENETIEV 608 Query: 580 VR---------ASWLAKENRARIDDVV-DFLKNA-------SDSEQYAESPTIRSR---L 619 ++ A AK A + V D K A +QY + + L Sbjct: 609 LKIGEHFVTKDAVIYAKTTIATMCGVSGDNTKEAIIEKGLNEGIKQYGDCLNLDKYARVL 668 Query: 620 DEM--------IVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 +EM + L YT++G +G+YF + + + ++ + + E ++ L ++ Sbjct: 669 EEMENGMGRELAISLYPYTSSGVHGRYFRQGKNA-KFNSPLTIFEFEEIKGDEVFLSVIL 727 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 +++ I + R+ + + ++DE WR++D H VG F+E RT R++ G+ IT Sbjct: 728 GIVLMQITMQFLCGDRSKRFVLIVDEAWRIID---HSVG-FLEAFARTVRKYGGSLITCV 783 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 Q DFD+ +A NSS+ +L+Q E A Q+ + +I Sbjct: 784 QEFKDFDN---GPKHQAILNNSSWTAVLRQ---EPAGIGQMRHSEKFKNCTSLIETITKD 837 Query: 792 KDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 + +S +L N RL VDP S +YS++ D+ F+ Q + GL A+ +L Sbjct: 838 PENKYSEIMLMGSNLRVIGRLVVDPYSECLYSTESEDYGFLHQCKNNGLDKDTAIRELI- 896 Query: 852 KKSGPEMASLEAWLEEHEKYRSV 874 K+ G ++ + E+ YRS Sbjct: 897 KRKGKKLPEFKIEYEQ-VAYRST 918 >UniRef50_A0R7Q8 Sex pilus assembly protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7Q8_PELPD Length = 816 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 190/845 (22%), Positives = 351/845 (41%), Gaps = 90/845 (10%) Query: 39 QFSRLLPYRDYNQESGLFM-NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 + S LP+ Y+++S L++ D +G+ E P+ A E+ V L+ + +P P Sbjct: 28 KISDYLPWIAYDRDSHLYLLADDCLGYAWECSPLFFAGENTVSTLEGLFGGDIP---PEA 84 Query: 98 IHLMSSQLVGDR-IEYGLREFSWSGE-QAERFNAITRAY--YMKAAATQFPLPEGMNLPL 153 ++ L GD IE L E+ + + IT + + ++ + G + Sbjct: 85 VYQFI--LFGDSYIEPILHEYKQRKKLDHDVVELITESLSDFYRSGTSGLKNMSG----I 138 Query: 154 TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMI 213 ++ +R+FIS P K D+ + +++ I L GAS+ ++ + +D + Sbjct: 139 PVKRFRLFISIKFPQKWAEGVDLNQTWSMINEI---LTGASLHPVCLEPELLLDWGRRLF 195 Query: 214 NHNP---DSLY----PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 N P +SLY P R+Q+ + L EN N +I Sbjct: 196 NDKPSANNSLYDENIPIRKQMLLGTKLTRN--------------------ENTLNVDGKI 235 Query: 267 LNFHLARN----PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV-KTHSEANL 321 + E + + L++ PF+ +T+++E Q K H++ N Sbjct: 236 FRCITPKTWPHEIETLSINKLFGGIKGLMSDGEQFKTPFLYCMTVLMEPQKNKLHTKCNF 295 Query: 322 KYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 L+++ S+A P++E+ E+ L G+ FL I ++ Sbjct: 296 I---LKQQGVGSFA---PALERTKGEYLWAVDELERGKK-----FLRIIPALWVYSDDEW 344 Query: 382 EVEQDILNS---FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR---AE 435 +V + + + + NGF + R + FL LP G + AG ++R Sbjct: 345 KVNESLTRAKVIWESNGFVMQEDRGILVPLFLASLP----HGFYNVGNNAGYLERDFIVP 400 Query: 436 SFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTG 494 + +A +P D + +L + +L D+F +G +N N V G SG+GK+ Sbjct: 401 AETIAATIPCQGDFSGFGSPSMLLVGRKGELFGFDLFAKGADNFN-GFCVAG-SGSGKSV 458 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSA 551 L+ ++ G + D+G K L + Y++ NPF +++D + + Sbjct: 459 FANSLLCNMRAEGNIIRIMDIGRSMKKLAKMFNARYMELSEDSMDNLNPFTHVSD-ETAL 517 Query: 552 ERVRDQLSVMASPNGNL--DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQY 609 + + ++ MA +G E+ L+ QAV ++ + N A I V +L++ Sbjct: 518 QTIIPVVTQMAFSSGASMPSELDVNLIGQAVEWAYANEGNDAGITTVFQYLRDFKKLVG- 576 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 +ES IR D++ L ++ +G Y +YFN +MVVLELG ++ +L Sbjct: 577 SESFEIREAADKLAFNLAHWSGDGVYAKYFNGKATFDIASDEMVVLELGSIKSLANLYRV 636 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 V +I + Y + K+ ++DE + L +H G IE YR R+H+ Sbjct: 637 VTQLVINEVALDAYHSSGKDKRFILMDEAHQYLGESSHIKGT-IEGFYRMLRKHSAGCFV 695 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL--YPDQFLPLQRDMIGK 787 I+Q+I+D + + + + NS+YK LK E A +L Y + + L + + Sbjct: 696 ISQSILDLN--RFGAVGEVIFNNSAYKFYLKSDDYEKAHNLKLLDYDNFTMALLKSV--- 750 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVW 847 +S + RL +DP S Y+SDG + ++ GLS +A+ Sbjct: 751 --TTNKPNYSEIFMHTPFGKGLGRLVLDPFSYYAYTSDGEEVAEIESMVDGGLSYADAIR 808 Query: 848 QLAWK 852 ++ K Sbjct: 809 KMVAK 813 >UniRef50_C0QUW6 Type-IV secretion system protein TraC n=1 Tax=Persephonella marina EX-H1 RepID=C0QUW6_PERMH Length = 926 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 164/653 (25%), Positives = 277/653 (42%), Gaps = 93/653 (14%) Query: 160 VFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDS 219 V I + S + R + L IR +++ +A + I E++N Sbjct: 158 VHIPFESDNPDVVRIQFRRIRKLANRIREAIRAEGFGCDFANADMMLAIYKEILNPELQG 217 Query: 220 LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAF 279 ++ LD N Q ++ + L++ L L F ++ P Sbjct: 218 AIKYQKGLD----FNRQVLDRNTTLRLVGG-LESDLEVANDEKKKYWRGFWFSQYPNEMT 272 Query: 280 LWNMADNYSNLL------NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS-KT 332 LW +SN+L NP I F + + + VED K ++ K + ++ ++ K+ Sbjct: 273 LWK----FSNILFPYDDTNPSPIIPTDFFMCMQVKVEDIEKRQTKITAKAIQMQDQAEKS 328 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSV-VSYFLNITAFCKDNNETALEVEQDILNSF 391 +A+W P +++ + +++ + G+ S +L I+A DN E ++ + F Sbjct: 329 EFARWIPKIKRRGEYAKYIKEVIEDGKVPYSASMYLFISA---DNPEHLDDIASGAVQRF 385 Query: 392 RKNGFELISPRFNHMRNFLT-CLPFMAGKGLFKQLKEAGVVQRAESF---------NVAN 441 F+L + N L CLP Q+KE R E F N+A+ Sbjct: 386 VSKKFKLAREIDASLFNVLMECLPL-------NQIKE-----REEFFINYSTLFDANIAS 433 Query: 442 LMP-----LVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 LMP L + P+T L + L D F ++TN+N+ SG GK+ Sbjct: 434 LMPFQGTSLGSKRPIT----LYLDRKYSLWGFDPF---HSDTNFNIVKIAASGGGKSFSE 486 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQSAER 553 L +G V D+G YK LC +GG Y++ + R FNPF +I + D+ Sbjct: 487 NDFHVLNLSAGRKIRVIDIGWSYKPLCSLLGGEYIELDDERNPCFNPFTHIIE-DEKGNI 545 Query: 554 VRDQLSVMASPNG---NLDEVHEGLL-----LQAVRASWLAKE---------NRARIDDV 596 D+L+V+ G LD E L+ L A S++A+ N+ + +V Sbjct: 546 HEDELAVLIPFVGLLAGLDLNPEALISNEDNLMARYCSFIARAITNAYKSYGNKTGLKEV 605 Query: 597 VDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLE 656 V+ L+ D I +L + + ++G Y +YFN E ++ VVLE Sbjct: 606 VEELQKLEDD----TGDNIPQKLSQALYEF----SHGHYARYFNG-ENNIHYSKDYVVLE 656 Query: 657 LGGLEDR-PSLLVAVMFSLIIYIENRMYRTPRNL---KKLNVIDEGWRLLDFKNHKVGEF 712 L +E++ P L A+++SLI+ I + +K V+DE W +L + K G F Sbjct: 657 LEQIENKDPRLKQAILYSLILRIFREFFLAHLRKDYSRKFLVVDEAWSIL--RESKAGYF 714 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 +E R R++ + + ITQ I D AS A RA + NS++ +ILK S ++ Sbjct: 715 LETAARRFRKYGCSLVVITQKIEDL---LASPATRAIYANSAHLMILKPSEQD 764 >UniRef50_B7J837 Type-IV secretion system protein TraC n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J837_ACIF2 Length = 866 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 124/575 (21%), Positives = 246/575 (42%), Gaps = 56/575 (9%) Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLG 356 ++ P L T+ + DQVK + + +S W P + + + L + + Sbjct: 274 LTLPAALVWTINIPDQVKKRRAITNESTLINWQSGKRMMSWSPKLRLKKEGIDFLMEAIN 333 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 +G +++ F + + +T ++ K GF ++ + + FL +P Sbjct: 334 TGDNALEMAFTAL--LWGPDAKTVKNASGSFISHAAKAGFVMLPDKQIALPMFLNAMP-- 389 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLM---PLVAD--------NPLTPA--GLLAPTYRN 463 LF + + R +S + + P+++D + L+PA G L + R Sbjct: 390 ----LFPDRESMAMTFRYKSVGTTHAVAACPVISDWQGNNMEDSRLSPACSGTLLVSRRG 445 Query: 464 QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLC 523 L DIF +N+ +N + G + +GK+ Q L+ L G V ++G ++ LC Sbjct: 446 HLMVFDIF---ASNSGHNFVLAGMTRSGKSVTAQQLVMDQLSVGAQVWVIEVGRSFEKLC 502 Query: 524 ENMGGVYLDGE---TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAV 580 + GG ++D + NPF + +D + + M SP G L + + A+ Sbjct: 503 KLFGGDHIDLRPEMDVGLNPFTVVGVLDDEISELTAIIGTMISPRGELSDEDLSTVAMAI 562 Query: 581 RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 R+ + A DV +L A D+ A + M +++++T NG +G++FN Sbjct: 563 RSVYGKAGREATPTDVQAYLV-AQDNNPRAIA---------MGKMMNEFTLNGAHGRWFN 612 Query: 641 SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 + + ++ V LEL L+ RP +++ V+ ++ I + +++ +DE Sbjct: 613 APMNVSLNGSRFVNLELMELQRRPQVMLVVLMQMMFAIGKEISSATDKRRRILFVDEASV 672 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 LL+ + +F+E R +H GA Q + D ++ + R +++ ++++ Sbjct: 673 LLEIQTAL--DFLEGLARRVAKHQGALGIGIQALSDLYKNEKT---RTISAQTAHFLVMR 727 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA------KDQWFSSFLLQVENHSSWHRLFV 814 Q+A A+ QF+ IG G A K + ++ L E + RL + Sbjct: 728 QNADSVAQLEN--NKQFV------IGPSGLAMMKTVRKTKEYAETFLYSEESMAIGRLKL 779 Query: 815 DPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 DP R ++++DGP+ E V + + G+ A+ Q Sbjct: 780 DPYRRVLFATDGPEKEEVVEAMRNGVDPDAAIRQF 814 >UniRef50_A9AU11 Type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU11_BURM1 Length = 860 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 142/594 (23%), Positives = 241/594 (40%), Gaps = 49/594 (8%) Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLG 356 I P I+T T+ V +Q + + + + + E++++ Sbjct: 268 IEGPCIITTTVRVANQRREWTRVESAIRSRRQHQPLPIKLGVEDTPRVLADLEEIKRQCA 327 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 + V N F +D +E A+ + + K GF+ + LP Sbjct: 328 EDGTKFVYVSTNAFLFGRDRDE-AVRAGASVKGTLDKLGFDGRDVVATGLVRLAQTLPLN 386 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADN--------PLTPAGLLAPTYRNQLAFI 468 + L AG A S V L+P+ D PLT G+ PT R + + Sbjct: 387 FSNTIADDL--AGEATMASS-EVGCLLPVYGDYLGNVNSDFPLT--GMAYPTRRGTMHYF 441 Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG 528 D + ++N+N+N + SG GK+ +Q I + L G V+FD G C +GG Sbjct: 442 DPY---VSNSNFNGVMAAESGVGKSFSLQAKITAELAEGDNIVLFDNGRSSLKFCALIGG 498 Query: 529 VYLDGETLR-----FNPFANITD--IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR 581 Y + + PF+N+TD D+ E + +MA D L +AV+ Sbjct: 499 EYNEFGGAKAWRPSLQPFSNLTDEEFDEQQETITSLHMLMAYDEEKPDPGARIALSEAVK 558 Query: 582 ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD----EMIVLLDQYTANGTYGQ 637 A+W + A + + L+ +S A I++++ +I L + + T G Sbjct: 559 AAWGQRGKDAEVSTTIACLQAIVES---AAENQIQNQVHVAAANLIPRLKAFVDSPTRGP 615 Query: 638 YFNSDEPSLRD-DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 YF PS D A+ V EL GL D L V+F + + +R+ + + K++ V D Sbjct: 616 YFRG--PSTLDPKAQFTVFELAGLGDDNHLKRVVLFCCVNILLSRIKKF-KGRKRIYV-D 671 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E L F + E Y R++ + I Q+++ S KA S S++K Sbjct: 672 EAQDL--FSIDSAADAFEGLYLKGRKNGVSVWVIVQSLLKLASFKAGS---VILRQSAWK 726 Query: 757 IILKQSAKEF-AKYNQLYPDQFL--PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 +I+ Q E A +Q F P + +I + K+ W S L+ + RL+ Sbjct: 727 MIMAQKKDEIDAVIDQKVMTAFADDPYFQKLIKSVESKKNFW-SEILIMSDKTYEVVRLY 785 Query: 814 VDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEE 867 VD + ++SS+G + V Q +EG+ EAV ++ G + A W+ E Sbjct: 786 VDKFTATLFSSEGAARDDVLQMMEEGVGPLEAVRKVM----GDKKARRREWMSE 835 >UniRef50_B0RL05 Type IV secretory pathway VirB4 component n=2 Tax=Yersinia RepID=B0RL05_YEREN Length = 857 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 164/746 (21%), Positives = 309/746 (41%), Gaps = 91/746 (12%) Query: 40 FSRLLPYRDYNQE----------SGLFMN-DTTMGFMLEAIPINGANESIVEALDHMLRT 88 S LP+ Y +E S F N D T+G++ E P+ E + L ++++T Sbjct: 33 LSSFLPFVSYKEEIETESGEKIKSKAFFNIDNTIGWIWELTPLPFVGEDQLGKLHNIVKT 92 Query: 89 KLPRGIPLCIHLMSSQLVGDRI-EYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE 147 P+G L + D + EY G+ N + Y++ A P+ Sbjct: 93 HYPKGTVAQWILYPDHNIDDILDEYAACRVQ--GDPITDMNVRNTSQYLRNGAENGIHPQ 150 Query: 148 GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFID 207 +P+ R++RVF + + + + E+L+ I A + + + A I Sbjct: 151 MNGIPV--RNFRVFYTI--------KCEEMIREDLLSSIEQIFDTAGMAPRRIGATELIR 200 Query: 208 -----IVGEMINHNPDSLYPKRRQL---DPYSDLNYQCVEDSFDLKVRADYLTLGLRENG 259 G+ D P +Q+ DP D ++ ++ + D+ Sbjct: 201 WMSEFFCGKKFTGEYDPERPLAKQMMSNDPAYDRSF---DNGGHHEALQDFSVTPNILGH 257 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 R T N ++ + Y +++ I PF+ TLT++ D+++T A Sbjct: 258 RYGTCLFPNVIPQKDNNPLRTNELFGGYKGVIDDRGQIKYPFLYTLTIIY-DELQTDI-A 315 Query: 320 NLKYMDLEKKSKTSY----AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYF---LNITAF 372 N K S+T + A ++++ E+ +++Q L G +YF L + Sbjct: 316 N-------KASQTMFQRVGAGLVFALKERINEFSQMQQTLAQGGD--FAYFIPQLWVFGK 366 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMR-NFLTCLPFMAGKGLF---KQLKEA 428 K + A+ +D+ + + FEL+ P N + +LT LPF G + LK Sbjct: 367 TKKDVRAAVSEAKDLWGNHK---FELM-PETNMSKVMYLTALPF----GFYNIDSNLKNM 418 Query: 429 GVVQRAESFNVANLMPLVADNPLTPAGLLAPTY---RNQLAFIDIFFRGMNNTNYNMAVC 485 A+ N+A +P+ D G TY + Q+ +D+F + +N+ +N V Sbjct: 419 DRFFYADYENIARFLPVQGD--FRGGGKPVQTYIGRKGQIIGLDMFDKRVNS--HNFYVV 474 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFA 542 +G GK+ L+ L+ S G + D+G YK L G Y+D + + NP Sbjct: 475 AETGGGKSFLLNDLLDSYASCGAKIRITDLGASYKKLTHIRKGRYIDFALDKPMCMNPSD 534 Query: 543 NIT----DIDQS-AERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDV 596 I D++Q+ A V S S G + EV LL QA AS + +DD+ Sbjct: 535 FIAKDAEDLEQNIAAAVLIYSSCAYSFTGQTVTEVEANLLDQACHASHRKGNQESGVDDI 594 Query: 597 VDFLKNA----SDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF-NSDEPSLRDDAK 651 + +L++ A + I ++ + LL+ + +NG + ++F E S+ D + Sbjct: 595 IAYLRSGEWKKGQEISVAAAQEIENQAQRLAFLLNNFGSNGQFKKFFVGKSEFSISQD-E 653 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH---- 707 V ++L L+ + L ++ ++ + +Y + R+ K + +E ++ + + Sbjct: 654 FVCVDLEKLKSQKQLFFPMIMQVMNAMTQDLYLSDRSQKSFILFEEIASMVKQQGNISMD 713 Query: 708 KVGEFIEKGYRTARRHTGAYITITQN 733 + +E+GYR AR++ GA+ + Q+ Sbjct: 714 GLASMVEEGYRRARKYLGAFGIVLQS 739 >UniRef50_A0L303 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L303_SHESA Length = 894 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 181/874 (20%), Positives = 340/874 (38%), Gaps = 115/874 (13%) Query: 35 MSFPQFSRLLPYRDY-----NQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTK 89 + ++S ++P D + G + +G P G S + LD + + Sbjct: 11 LGIEKYSSIIPILDEFVSEEGEHLGYILEGGYLGVTWLCPPSGGYGASTISTLDSIFKKV 70 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA---------YYMKAAA 140 P G L L++S D + L + + RF+ + YY A Sbjct: 71 YPEGTVLQFSLVAS----DDLVTVLDNYRHCRGKRNRFDTVIDNDNMTEYMVDYYKALAD 126 Query: 141 TQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKII---RASLQGASITT 197 T P + +PL R++ V+ S P KK + E+E+ V + ASLQ Sbjct: 127 TSIPSRDMEGVPL--RNFEVWASIKVPIKK-AMPSTEEVEDFVDMANNHEASLQQIFGVA 183 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLD-------PYSDLNYQCVEDSFDLKVR-AD 249 + + I+ + + N +P++++ + ++D + Q +E ++KV +D Sbjct: 184 TKMQPEILINRLQMIHNPSPNAVWRRGIKVDGRQGCYRSSQPIRAQLLEPGTEVKVDGSD 243 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 Y+ + E+G S I + + P+ + + + L + + P + LVV Sbjct: 244 YMAIKA-EDG--SKRFIQSVSIKEFPDSIYQGTLHLMTGDWLKGDDG-AIPGNFMINLVV 299 Query: 310 EDQVKTHSEANLKYMDLEKK-SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 E K ++ K + K+ + +A+W S++ +++ L ++ + LN Sbjct: 300 EMSPKKVAKDYSKRRLMAKQIGEGPWARWISSLKYGLQDFEYYEHYLEREKAQHCRFHLN 359 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 + ++ I R GF + + + + ++ G + + + Sbjct: 360 FQMWGPTLKSVKNSTKKLIT---RMEGFSWSA----GVDSLIGRFTWLNGLPMCTSSEVS 412 Query: 429 GVVQRAESFNVANLM----PLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 ++R + F +NL+ P+VA P TY + + F +++NYN+ + Sbjct: 413 SFIERFD-FLPSNLVKFFVPMVASWPGNAVRHPVLTYIARDGQLITFDPLKSDSNYNIFI 471 Query: 485 CGTSGAGKTGLIQPLIRSVLDSG-----------------GFAVVFDMGDGYKSLCENMG 527 TSGAGK+ LI +L +G G + D G Y E Sbjct: 472 TATSGAGKSVSANYLIEGLLSTGENRYPDALGNIHGDPDGGRVFIIDSGRSYVKTTELYA 531 Query: 528 GVYLD---GETLRFN--PFANI----TDIDQS-------------AERVRDQLSVMASPN 565 G +++ FN PF +I D D+ E + + L +MA P Sbjct: 532 GQFVEVMPDNRFAFNLCPFKSIDESQKDTDEGVVDSDANNYLGAQGEMLLNVLKLMAFPL 591 Query: 566 GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVL 625 G+ + + + W K IDD D E +R D++ Sbjct: 592 GDCNSYQYSAMSVLLMQLWNEKGRETSIDDFADACAKHPREE-------VRQISDQLTPW 644 Query: 626 LDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT 685 Y G FN ++P ++ + +VVLEL GL L + I I+ M+R Sbjct: 645 C--YLRGGQNSWMFNPNKPPIQFEKDLVVLELDGLNGSDQLKAVCIMLCIQRIQQEMFRH 702 Query: 686 PR-NLKKLNVIDEGWRLL------DFKNHKV----GEFIEKGYRTARRHTGAYITITQNI 734 + ++ K ++DE W L D + +V +F+E G+R R++ + I+Q++ Sbjct: 703 DQLHIVKAFILDEAWEFLKENKGVDEQTRQVLQTLAKFLESGWRRFRKYNSLGVCISQSM 762 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D + S A A NS++ L Q+ +E A+ N+ +F+ ++ + Sbjct: 763 KDANE---SPAGIAMASNSAHLFYLMQNGEELARLNK--EGKFIEQDYLLLRNIKTVR-P 816 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 +FS LL S RL++ P ++A+ S PD Sbjct: 817 FFSEVLLCSGGTKSVGRLYL-PRAKALTYSTAPD 849 >UniRef50_Q2IEL2 Type IV secretory pathway VirB4 components-like n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEL2_ANADE Length = 861 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 117/497 (23%), Positives = 208/497 (41%), Gaps = 46/497 (9%) Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG-FELISPRFNHMRNFLTCLPF 415 S + +S L + A D E A E + ++F G EL+ + L+ LP Sbjct: 356 STKVVALSVSLLLEAGSLDELEAATEASR---SAFAAAGNSELLVEEVTQVPALLSMLP- 411 Query: 416 MAGKGLFKQLKEAGVVQRAESFNVANLMPLVA---DNPLTPAGLLAPTYRNQLAFIDIFF 472 QL++ G R N A+ +P+ A + + LL PT + D+F Sbjct: 412 ---GACRYQLRKKGCTSR----NAADFLPVFAPWRGSARASSVLLTPT--GEAFRFDLFD 462 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 + ++ V +G+GK+ + L +G A++ D G +K L E +GGV++ Sbjct: 463 KSSGVNAHHGIVVADTGSGKSVTLGALTLDARAAGVEAILIDNGKSWKPLTELLGGVHIP 522 Query: 533 GE-TLRFNPFANITDI--------DQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVR 581 + + +PF + + + ++ E V L V + D+V ++ +A+R Sbjct: 523 VDLSTSISPFLSYSQLAGEGTEISNEDIEHVVQFLEVCVADRTRPPFDKVERDVVARAIR 582 Query: 582 ASWLAK-ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 ++ + R +V + ++ P R+ D+++ L + G Y + N Sbjct: 583 WTYETRFRQRPEEPPLVGQFSEGLATHEWTH-PDDRAIADDLVRRLAIF-CTGIYADFLN 640 Query: 641 SDEPS-LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENR-MYRTPRNLKKLNVIDEG 698 PS LR DA ++ +L + + M ++I I NR M R R L + +DEG Sbjct: 641 --RPSQLRFDAPLLTFDLAKVSENAGTKSVAMATIIQAITNRAMARRTRTLVE---VDEG 695 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 L + F+ YR R++ A I+QN+ DF + A GNS+ +I Sbjct: 696 HEYLG-ADDATERFLGGCYRKMRKYDTAMWMISQNLNDFLGSRVGR--EAIVGNSTIRIF 752 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG-AAKDQWFSSFLLQVENHSSWHRLFVDPL 817 L+ A ++ + F R G K WFS FLL ++ RL + PL Sbjct: 753 LRH----LAGKHRAVVEHFGLSPRAAAAFAGLELKPGWFSDFLLMYGARTAVVRLALHPL 808 Query: 818 SRAMYSSDGPDFEFVQQ 834 + + ++D D +F+ + Sbjct: 809 AYWILTTDKEDQDFLAR 825 >UniRef50_Q1NGT3 Sex pilus assembly protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT3_9SPHN Length = 839 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 103/419 (24%), Positives = 174/419 (41%), Gaps = 40/419 (9%) Query: 456 LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM 515 LL + QL +D+F +NN YN V SGAGK+ L+ L + G + D+ Sbjct: 420 LLYAGRKGQLITLDLFDPRINN--YNFIVSAESGAGKSFLLNNLCQQYYAQGALIRIIDI 477 Query: 516 GDGYKSLCENMGGVYLD--GETLRFNPFANITDIDQSAERVRDQLSVM-------ASPNG 566 G Y LC G Y+D E L NPF +D + ++V A+ Sbjct: 478 GGSYAKLCTLCSGRYIDIGEEHLVLNPFDMGFALDGDDRQSAISMAVAIVAEMAHAATRK 537 Query: 567 NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES---------PTIRS 617 + LL AV+ + + A ID V D+L YA S P R Sbjct: 538 GVSTSEWNLLKSAVQWTIDSGRAEAGIDAVRDWL---GAYPAYATSDLDKVDHLIPAAR- 593 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA--KMVVLELGGLEDRPSLLVAVMFSLI 675 E+ L + ++G YG YFN PS D + + VVLEL L+ P L ++ ++ Sbjct: 594 ---ELAFNLRDFASSGAYGHYFNG--PSTFDISADEFVVLELERLKAMPDLFNVIVMVVV 648 Query: 676 IYIENRMYRTPRNLKKLNVIDEGWRLLDFKN----HKVGEFIEKGYRTARRHTGAYITIT 731 + +Y + R+ + + DE + + + ++ E +GYR AR++ G++ + Sbjct: 649 NAVTQELYLSARDRPRFVLCDEAAQFMTRTDGQDLSRLAEVFGQGYRRARKYQGSFGVVL 708 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 Q++ D + N++ + +L+ S + A N++ + D++ Sbjct: 709 QSMNDL--LLFGGIGQVILENAATRFLLQGSTYDRAVENKIL--DYSGFVLDLLKSVRNN 764 Query: 792 KDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLA 850 K +S + RL VDP S + +S + + + + G S EA+ LA Sbjct: 765 KPH-YSEVFIDSPLGLGIARLVVDPFSYWINTSAPQEVAAFEARLRSGRSPLEAICDLA 822 >UniRef50_A6EBE8 Conserved protein found in conjugate transposon n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBE8_9SPHI Length = 514 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 24/292 (8%) Query: 466 AFIDIFFRGMNN---TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSL 522 ++D+F + M TN N+ +CG SGAGK+ ++R++ D G V D+G YK L Sbjct: 108 VYVDLFDQPMKTGVVTNRNLFICGGSGAGKSMACNHMLRTLYDEGTHCVTIDIGGSYKGL 167 Query: 523 CENMGGVYL---DGETLRFNPF----ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL 575 C+ +GG Y + ++FNPF ++ DI++ E ++ L + +G E + Sbjct: 168 CDLVGGYYFSYTEENPIKFNPFFIGTDDVLDIEKK-ESLKTLLLALWKRDGEHFSRSEYV 226 Query: 576 LLQA---VRASWLAKENRA--RIDDVVDFLKNASDSEQYAESPTIRSR---LDEMIVLLD 627 + + +LA+ + + DFL + Q E+ ++ + L ++ +L+ Sbjct: 227 AISGAITLYYEYLAENSSVFPGFNSFYDFL--MLEYMQVMENGKVKEKDFDLGNLLYVLN 284 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 Y G + N+ E + + +V EL + L V ++ ++M R + Sbjct: 285 PYYKGGEFDYLLNATENLDLLNERFIVFELDNIRSHEVLFPVVTIIIMEMFISKM-RKLK 343 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 +K+ IDE W + + FI+ ++T R+ G ITQ + D S Sbjct: 344 GQRKILAIDEAW--VAIAKTGMSHFIKYLFKTVRKFNGIAALITQEVDDLIS 393 >UniRef50_B0KAW2 Type IV secretory pathway VirB4 components-like protein n=6 Tax=Thermoanaerobacterales RepID=B0KAW2_THEP3 Length = 594 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 92/406 (22%), Positives = 170/406 (41%), Gaps = 58/406 (14%) Query: 403 FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR 462 F PF L ++KEAG + + VA P A +G++ R Sbjct: 164 FRQEEGLKAAGPFCT---LPDEVKEAGA-RNMPAETVAASFPFTASGINDGSGIVLGKDR 219 Query: 463 NQ-LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 + L +DI+ RG + TN N + GAGK+ + L+ G ++ D YK Sbjct: 220 DGGLVLVDIWKRGGDRTNSNWTILAKPGAGKSFTAKMLLLREYMQGSRVIIIDPEREYKE 279 Query: 522 LCENMGGVYLD--GETLRFNPF-ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQ 578 +C +GGV+++ G + NP + +++ E + +V SP L +Q Sbjct: 280 MCRKLGGVWINCTGGEGKINPLQVRLRPVEEEDE----ENAVFQSP--------LALHIQ 327 Query: 579 AVRASW------LAKENRARIDD-VVDFLKNASDS------------------------E 607 +R + L +A ++D +V+ K A + + Sbjct: 328 TLRTFFSLYLRDLTDTEKAALEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELYEYCVK 387 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSL 666 + E+P RL VLL + A G Y + ++ D+ +V ++ L++ + Sbjct: 388 KAEENPETYGRLS---VLLKR-AAEGA-DSYLWAGPTAVEADSDFIVFDVHDLQNAEDQV 442 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 A F+++ + N + R R + + V+DE W L+D + + F+ + R++ G+ Sbjct: 443 KRAQYFNVLSFAWNILERDRRE-RTVLVVDEAWMLVDPQTPQAIAFLRDTSKRIRKYNGS 501 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 I I+QN++DF + + +A N +YK++L Q K+ L Sbjct: 502 LIVISQNVIDFLAPEVQRYGQALLDNPTYKLLLAQGEKDLEAITTL 547 >UniRef50_A5KS14 Type IV secretory pathway VirB4 components-like protein n=7 Tax=candidate division TM7 RepID=A5KS14_9BACT Length = 625 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 118/453 (26%), Positives = 196/453 (43%), Gaps = 67/453 (14%) Query: 339 PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 P VE ++ ELR ++ G Y L +T + D E ++ I G +L Sbjct: 127 PQVEAAIQDAEELRNQIQVGSERFFRYGLYVTMYA-DGLEELNFIQHKIETIL---GQQL 182 Query: 399 ISPRF---NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG 455 + + + + P M+ + ++ G + + F A+L G Sbjct: 183 VFSKVASSQQEQGMNSTFPQMSDQLQIRRNMNTGAISTSFPFTSADLT--------QEKG 234 Query: 456 LL--APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAVV 512 +L + N L D F N NM V SGAGK+ ++ +RS++ G ++ Sbjct: 235 ILYGVNMHNNGLVIFDRF----TLENANMVVFAKSGAGKSFTVKLEALRSMM-IGTDVII 289 Query: 513 FDMGDGYKSLCENMGGVY----LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNL 568 D + Y+ LC+ +GG Y L+ +T R NPF ID +E D L NL Sbjct: 290 VDPENEYQRLCDAVGGSYVRLSLNSDT-RINPFDLPQVID--SEDADDAL------RANL 340 Query: 569 DEVHEGLLLQAVRASWLAKEN-RARIDD-VVDFLKNA---SDSEQYAESPTIRSRLDEMI 623 +H L L A+ L N A +D ++D A SD + P L E + Sbjct: 341 VTLHGLLRLMLTNAAVLLTPNEEADLDQALIDTYARAGITSDPLTHQSPPPTIGDLYETL 400 Query: 624 V-----------LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED--RPSLLVAV 670 + L +YT+ GT+ F S + ++ + MVV + LED RP Sbjct: 401 LHMGGSGPSLAQRLRKYTS-GTFAGIF-SQQSNVDINNNMVVFNIRDLEDELRP----VA 454 Query: 671 MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 M+ ++ +I N++ RT + K++ ++DE W+L+ + + F+ + AR++ TI Sbjct: 455 MYIILSHIWNKV-RTEQK-KRMLIVDEAWQLMKYDDS--ANFMFSLAKRARKYYLGLTTI 510 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 TQ++ DF S RA NSS +++LKQS+ Sbjct: 511 TQDVEDF---MGSKMGRAIVANSSMQLLLKQSS 540 >UniRef50_C2FTT8 Conjugative transposon protein TraG n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTT8_9SPHI Length = 829 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 21/318 (6%) Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG 528 D+ R N N V G+SG GK+ I + + L V+ D+G Y LC GG Sbjct: 403 DLVMRTGRIKNRNRFVLGSSGTGKSYAINAICQQYLQYNTDVVIVDVGHSYSGLCSTYGG 462 Query: 529 VYL---DGETLRFNPFANITDIDQSAERVRDQLSVMA----SPNGNLDEVHEGLLLQAVR 581 Y+ + + + NPFA I++ + + E+ ++++ G + V ++ + Sbjct: 463 KYITYSEEKPITMNPFA-ISEEEYNIEKKDFLITLICLLWKGSEGTVTTVERDVISNVIS 521 Query: 582 ASWLAKENRARIDDVVDFLKNASDSE-QYAESPTIRSR------LDEMIVLLDQYTANGT 634 A + ++A I+D VD L S E + P IR+ ++E +L ++ G Sbjct: 522 AYYAHHFDKA-IEDRVDKLDFNSFYEFAVRKIPDIRNEESIAFDVEEFRFVLKKFYRGGE 580 Query: 635 YGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV 694 Y N + + + +V E+ +++ +LL V ++ +M R +N +K + Sbjct: 581 YEAILNEEADQSLFNEQFIVYEIDNIQNNKTLLPIVTLIIMDLFVQKM-RHRKNRRKTLI 639 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 ++E WR + + + F+ +T R+ G I +TQ I D + + NS Sbjct: 640 LEEAWRAI--SSPMMANFLLYLNKTVRKFWGEIIEVTQEINDIIGNPI--IKDSIINNSD 695 Query: 755 YKIILKQSAKEFAKYNQL 772 I+L+Q+ +F K +L Sbjct: 696 TIILLQQNEADFRKVAEL 713 >UniRef50_A6L0N6 Conserved protein found in conjugate transposon n=119 Tax=cellular organisms RepID=A6L0N6_BACV8 Length = 844 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 79/342 (23%), Positives = 144/342 (42%), Gaps = 41/342 (11%) Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENM-------GGVY 530 TN N + G SG+GK+ L+R+ + G ++ D G+ Y+ LC + G+Y Sbjct: 438 TNRNKFILGPSGSGKSFFTNHLVRNYYEQGAHILLVDTGNSYQGLCRMIHERTRGGDGIY 497 Query: 531 LDGET---LRFNPFANITDIDQSAERVRDQLSVM---------ASPNGNLDEVHEGLLLQ 578 + E + FNPF TD Q R+ + + +P + + G + Sbjct: 498 ITYEEDNPISFNPF--YTDSGQFDVEKRESIKTLILTLWKREDEAPKRSEEVALSGAVNA 555 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR---LDEMIVLLDQYTANGTY 635 +R +E R + +F+ D + +R + +D + +L+ + G Y Sbjct: 556 YIRKITENREARPDFNGFYEFVD--GDYRRMIAEKKVREKDFDIDGFLNVLEPFYKGGDY 613 Query: 636 GQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVI 695 NSD + + +V EL + LL V ++ +M R + ++K+ +I Sbjct: 614 DFLLNSDRELDLTNRRFIVFELDNISGNKVLLPVVTLIIMETFIAKMRRL-KGIRKVILI 672 Query: 696 DEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSY 755 +E W+ L N + +I+ ++T R++ G + +TQ + D S + A NS Sbjct: 673 EECWKALMSAN--MSGYIQYLFKTVRKYFGEAVVVTQEVDDIIS--SPIVKEAIINNSDC 728 Query: 756 KIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 KI+L Q Y ++F +QR ++G K Q S Sbjct: 729 KILLDQRK---------YMNKFEHIQR-LLGLTEKEKSQILS 760 >UniRef50_B0K833 Type IV secretory pathway VirB4 components-like protein n=6 Tax=Thermoanaerobacter RepID=B0K833_THEP3 Length = 611 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 38/325 (11%) Query: 478 TNYNMAVCGTSGAGKTGLIQPL-IRSVLDSGGFAVVFDMGDG-YKSLCENMGG--VYLDG 533 TNYN+ + TSGAGK+ LI+ L +R L G VF DG Y + + MGG V + Sbjct: 249 TNYNLGIFATSGAGKSFLIKLLSMRGAL--LGIKTVFVDPDGEYNRMVQKMGGSVVKIST 306 Query: 534 ETLR-FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK----- 587 ET NPF + D++ R D + +A + + EG++ + A LA Sbjct: 307 ETENIINPFDVEEEEDENEIRYVDIVQKIAEIKALVGMIVEGVMKDKISAEELAAVEEAV 366 Query: 588 --ENRAR-IDDVVDFL--KNASDSEQY-----AESPTIRS---------RLDEMIVLLDQ 628 E AR I+ + L KN +DSE++ E PT+ S R + + ++ Sbjct: 367 RDEYEARGINKSPESLYEKNIADSEEFYFKKKKEMPTLSSFVERLKKNPRGERIAAVMKP 426 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 + GT G + SL +D+ +V ++ + DR L M+ + +I + + Sbjct: 427 FLKGGTLGIFDGQTNVSL-EDSYLVNFDVSEIRDR-FLRTYAMYVITNWIWEKFVKKDVK 484 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 KK V+DE W + +K+ F+E R AR+ + +Q+ ++F + S +A Sbjct: 485 QKKRVVVDEAWMFMKYKD--TAYFLENLSRRARKRNTSLTVASQSFIEFSN---SQEGKA 539 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLY 773 NS+ ++KQ+A + +++ Sbjct: 540 VLTNSAAVFLMKQAATDIDSVQEVF 564 >UniRef50_B7ABM5 Type IV secretory pathway VirB4 component, ATPase TraC n=3 Tax=Thermaceae RepID=B7ABM5_THEAQ Length = 847 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 107/421 (25%), Positives = 178/421 (42%), Gaps = 50/421 (11%) Query: 403 FNHMRN-----FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL- 456 F +RN +LT PF G K V E+ N A+ P +P + Sbjct: 378 FRVLRNGLLTPWLTLAPFSGGVAEEK-------VYLLET-NAAHFFPTTGAWRGSPRPVA 429 Query: 457 LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL-DSGGFAVVFDM 515 L + L ++D F + M N YN V G SG+GKT +Q L+ +L D V+ D Sbjct: 430 LFKNRQGALVYVDPFDKRMRN--YNGIVVGGSGSGKTFALQYLLSELLKDDKVSVVILDR 487 Query: 516 GDGYKSLCENMGGVYLD---GETLRFNPF-ANITDIDQSAERVRDQLSVMAS--PNGN-- 567 G Y++L E GG ++ G NPF ++ + E+ D L V+ + P G+ Sbjct: 488 GKNYQALVEAFGGALIEIRPGAGTSVNPFDLEEGQVEPTPEKKGDLLKVLRAMVPAGDDR 547 Query: 568 LDEVHEGLLLQAV------RASWL------AKENR---ARIDDVVDFLKNASDSEQYAES 612 E E +L+A RA+ + +E R A + D+V L + S Sbjct: 548 TQEAIENAILEAAIEQTYKRATTVDIGPDGTEEKRYLGATLSDLVKTLLTLDEIGGRGVS 607 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 P+ + + + L +T + G + + + A++V EL GL+ L V Sbjct: 608 PSEKEVARSLALRLQSWTGDSPMGSFVDRPTSVPLESARVVCYELEGLDAYEGLDVVGTM 667 Query: 673 SLIIYIENRMYRTPRNLKKLN---VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 + I R R ++ N V+DE W++ FKN +E+ YR R G + Sbjct: 668 LMAGLIWKRASEGKRRGEERNLLVVLDEAWKV--FKNPYAASLVEELYRRFRHLGGGIWS 725 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILK-QSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 ITQ++ DF + A + N+++ +L+ Q E+ + PD+ + + + + G Sbjct: 726 ITQSLQDFTGESAGRIVQ----NTTWVFLLRVQGEDEYVQRVFNLPDRAMAVFKSLGGVK 781 Query: 789 G 789 G Sbjct: 782 G 782 >UniRef50_C1XZE7 Putative uncharacterized protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZE7_9DEIN Length = 866 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 85/304 (27%), Positives = 132/304 (43%), Gaps = 51/304 (16%) Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGF-AVVFDMGDGYKSLCENM 526 ID+F TN+N AV G SG+GKT +Q L+ + G ++ D Y L Sbjct: 450 IDLF--DPKTTNWNTAVIGASGSGKTFTVQMLLSDAMAEGEMDLIIVDKKGDYTPLVTLA 507 Query: 527 GGVYLDGETLRFNPFANIT----DIDQSA-ERVRDQLSVM---------ASPNGNLDEVH 572 GG T+ P A +T D+ A E ++L+ + SP+ +E+H Sbjct: 508 GGA-----TISIAPGAGVTLNMFDLPPGATEPSEEKLTFLQRVFHILKSGSPD---EEIH 559 Query: 573 --EGLLLQAVRASWLAKENR-----------ARIDDVVDFLKN---ASDSEQYAESPTIR 616 E L ++AVR ++ A R + DV++ L N S AE T+ Sbjct: 560 LKEQLWMEAVRTAYQAALERLPGEEGFRLGTVTLSDVLNTLPNLGKLSGRPIEAEEKTLA 619 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE--DRPSLLVAVMFSL 674 +L + L +T G G++ + + D +V ++ G + D P + A+ SL Sbjct: 620 RKL---AIELSVWT-QGAMGRFLDGKTNVVMGDNPVVYFDIAGFDAFDDPR-VTALGISL 674 Query: 675 II-YIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 I I +R+ R PR KKL + DE + FK + YR AR + TITQ+ Sbjct: 675 IAQLIYDRLNRRPRERKKLILFDEAHAV--FKIEASAALVTDLYRRARSYGAGVWTITQS 732 Query: 734 IVDF 737 I D+ Sbjct: 733 IADY 736 >UniRef50_C1SHE1 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE1_9BACT Length = 771 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 152/751 (20%), Positives = 288/751 (38%), Gaps = 116/751 (15%) Query: 39 QFSRLLPYRDYNQES-GLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 QFS L PY Y++E+ F+ D ++G++ E P+ A+++I + ++R + Sbjct: 27 QFSSLFPYVSYDEETESYFLRDNSVGWIWECSPVLFADDNIFNQIASVIRGAEAPDTIIQ 86 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQA--------ERFNAITRAYYMKAAATQFPLPEGM 149 L + + D+I G + ++ + ++ R + + P Sbjct: 87 YMLFADPFI-DQIADGYKNLRGRNKEILPIHSQLIDDYSEFIRKHGNRGMWQLSGTP--- 142 Query: 150 NLPLTLRHYRVFISYCSPSKK-------KSRADILEMENLVKIIRASLQGASITTQTVDA 202 LRH+R+FIS P K K R +++ + + ++ S++ + + D Sbjct: 143 -----LRHFRLFISVRIPVKADASTNTGKYRKEVVGHLDYISNVKESMKLFNPLSMKPDR 197 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS 262 I ++ ++N PD + K + D ++ Q + +++ + + R G + Sbjct: 198 --LITMLYRLVN--PDLEHNKTIEWDENIPIHKQILYSDTEVERAKNSIRFNGRRVGILT 253 Query: 263 TARILNF--HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK----TH 316 ++ +L N I ++ N +N + CPFI ++ +V+ +K T Sbjct: 254 PKKLPREIDNLFANDLIGYVSKGITAAENDIN---QLQCPFIYSVNIVINKNLKSKLQTK 310 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV-VSYFLNITAFCKD 375 + N K + K + + +E + QR G+ V V L I A +D Sbjct: 311 AVQNSKATESANKDGRHFDAFAAGTNNRKQENFYVAQRYEMGERFVHVIPQLMILAESED 370 Query: 376 NNETALEVEQDILNSFRKNGFELISPR--FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 + L + I N+ G E + R H+ F+ LP F+ L ++ Sbjct: 371 ELTSKLNRAKSIWNTC---GVECQTERDYLLHVL-FIAGLPCGMYHSNFQDLDRDFIL-- 424 Query: 434 AESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 +S + P+ A + + LL R +L +DI G N Y V G +GAGK Sbjct: 425 -DSKGASLFAPVQASFSGVGSPVLLYIDRRGELVSLDILNTGKNKNAY---VTGGTGAGK 480 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLRFNPFANITD-- 546 + + + S + G + + D Y+ C G Y++ G L F A + Sbjct: 481 SFFMNGFVNSYMSIGAKFRIITVCDSYRKACYMTDGQYIEHDESGMVLNFFEAAGVVKGT 540 Query: 547 --------------------IDQSAERVR------DQLSVMASPNGNLDEVHEG---LLL 577 ++Q ++ D L V + G+ +G ++L Sbjct: 541 LIQSINHNGVTYPARTKVEILEQGGSEIKILVGDSDVLYVRSENVGSYCIEMDGDTLIML 600 Query: 578 QAVRASWL-------------------------AKENRARIDDVVDFLKNASD-SEQYAE 611 + AS + K IDD+ D+L N S+ Q Sbjct: 601 TGILASMVTSRAGSELDEDELTIIENAVSYMFSVKGRETMIDDIHDYLMNISEYHAQDDR 660 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 S R + + L +Y + G YG +FN + ++R + +VV +L ++ + Sbjct: 661 SKYHRDTAYRLALRLGKYCSGGQYGHFFNG-KSTVRFKSDLVVADLTKTPVDLRKVIVLA 719 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 F+ I IE +Y+ R + V+DE W+ L Sbjct: 720 FANI--IEQEIYKGDRKTPQFVVLDESWQTL 748 >UniRef50_A5FFJ6 Bacteroides conjugative transposon TraG-like protein n=36 Tax=Bacteria RepID=A5FFJ6_FLAJ1 Length = 837 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 38/309 (12%) Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLC-------ENMGGVY 530 TN N + G SG+GK+ ++R + G ++ D G+ Y+ LC GVY Sbjct: 437 TNRNKFILGPSGSGKSFFTNHMVRQYYEQGAHVLLVDTGNSYQGLCGLINSRTRGEDGVY 496 Query: 531 L---DGETLRFNPFAN---ITDIDQSAERV---------RDQLSVMASPNGNLDEVHEGL 575 + + FNPF + DI++ E + RD S L G Sbjct: 497 FTYTEDNPIAFNPFYTDDKVFDIEKR-ESIKTLIMTLWKRDDEPPTRSEEVALSNAVNG- 554 Query: 576 LLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR---LDEMIVLLDQYTAN 632 ++ +R + LA + +++K D + + +R + + + +L+ Y Sbjct: 555 YIELIRDNGLAPS----FNGFYEYVK--GDYHEILKEKQVREKDFDIANFLNVLEPYYRG 608 Query: 633 GTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKL 692 G Y NSD + +V E+ ++D L V ++ N+M R + ++KL Sbjct: 609 GEYDYLLNSDRQLDLLAKRFIVFEIDAIKDHKILFPIVTIIIMEVFINKMRRL-KGVRKL 667 Query: 693 NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGN 752 +I+E W+ + + E+I+ ++T R+ G I +TQ + D K+ + N Sbjct: 668 ILIEEAWKAI--AKEGMAEYIKYLFKTVRKFFGEAIVVTQEVDDI--IKSPIVKESIINN 723 Query: 753 SSYKIILKQ 761 S KI+L Q Sbjct: 724 SDCKILLDQ 732 >UniRef50_A0M144 TraG-like protein n=3 Tax=Flavobacteriaceae RepID=A0M144_GRAFK Length = 804 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/393 (21%), Positives = 172/393 (43%), Gaps = 44/393 (11%) Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL-----DGET 535 N A+ +G GK+ L ++R +SG V+ D+G Y + G Y G++ Sbjct: 424 NFAIFAPTGEGKSFLANNILRQYFESGVRLVIIDLGGSYTKFAKLYPGQYTVLRYESGKS 483 Query: 536 LRFNPF--ANITDIDQSAERVRDQLSV----MASPNGNLDEVHEGLLLQAVRASWLAKEN 589 L NPF NI D+ S ER+ D LSV + + + + + + + +R +L + Sbjct: 484 LGINPFYINNINDL--SPERLED-LSVFLFELFASDLKVTKAQSVSIKKILRHYYLNTPH 540 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRS---RLDEMIVLLDQYTANGTYGQYF--NSDEP 644 +D F++ S+ ++ I + + ++ +Y +G Y F + D+ Sbjct: 541 NHSMDSFYQFIE--SNQKELLSKLKIHPDYFNITNFLHIMSEYVGDGLYSFLFEMSEDQT 598 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF 704 +D +++V EL ++D +L +VM LI R R+ K + + DE + L F Sbjct: 599 YKIEDKRLIVFELDEVKDNKEIL-SVMLKLIKSAIQRTIWKNRSEKGIILFDEFAKQLKF 657 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 +N V E +E Y+ R+ GA I Q+I ++ S++ IL+ + Sbjct: 658 EN--VLESVEFYYQAIRKQNGAIGIILQSINQLPNNSTSAS------------ILENTQV 703 Query: 765 EFAKYNQLYPDQF---LPLQRDMIGKFGAAKDQW-----FSSFLLQVENHSSWHRLFVDP 816 ++ +N+ ++ L L + + + + K+ ++ +++ S+ RL V Sbjct: 704 IYSLHNEKGYEELVRRLSLSKHDLNQLKSIKNNLTGSRKYTEIFIKIGKQSNVFRLEVPM 763 Query: 817 LSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 A Y +DG + + + + S+ +A+ + Sbjct: 764 EVYAAYQTDGSENDHIMALYDQHKSMEKAITEF 796 >UniRef50_A4J314 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J314_DESRM Length = 616 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/374 (21%), Positives = 158/374 (42%), Gaps = 60/374 (16%) Query: 438 NVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 N A L PL++ + P+G+ F+D+F +M +CG + +GK+ + Sbjct: 206 NAACLSPLISSDFTHPSGIYFGVNQSGSPVFLDLFIGAPRLFGPHMFLCGGTRSGKSYTV 265 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP----FANITDID---- 548 + + + +G + V+ D Y+ + E +GGV +RF P NI DI+ Sbjct: 266 KGITARSIANGMYTVIIDPEGEYQKIVEALGGV-----IVRFKPNMECMFNIFDIEPEED 320 Query: 549 -----------QSAERVRDQLS--VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD 595 AE + ++ V + N L L +AVRA +L++ + Sbjct: 321 EDTGNKYLDIAGKAEEICHLITSLVESQANEKLSAEERALASRAVRAEYLSRNITEDPES 380 Query: 596 VVDF-LKNASD-----SEQYAESPTIRS---RLDEM-----IVLLDQYTANGTYGQYFNS 641 + K D + Y E PTI S RL+EM +L +T G G YF+ Sbjct: 381 IYQSGGKTTGDGTVFIGKTYKEMPTISSFITRLEEMGAPKLATMLYPFTKEGGMG-YFDG 439 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRL 701 D ++VV ++ GL+ + A MF + + + + ++ +K ++DE W + Sbjct: 440 QGIGKFYDNQLVVFDVSGLKTEFQRMYA-MFVMTSWAWEKFVKKDKSKRKRLLVDEAWLM 498 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 + ++ +F+ R ++ + + +Q+ +F S++ K+IL Q Sbjct: 499 M--RHTDTAKFLSDLARRGAKYNTSLMLASQSFREFTSEEG-------------KVILAQ 543 Query: 762 SAKEFAKYNQLYPD 775 +F + +++P+ Sbjct: 544 CNTKF--FLKMHPN 555 >UniRef50_C4XEH5 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEH5_MYCFE Length = 700 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 68/340 (20%), Positives = 149/340 (43%), Gaps = 36/340 (10%) Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG 528 D+F + + T+++M + G G+GK+ + G ++ D YK LC+ + G Sbjct: 313 DLFKKTKDRTSFSMIIWGVPGSGKSATTSKIALHQFVVGNEVIIIDPQREYKDLCKKLDG 372 Query: 529 VYLD---GETLRFNPFANITDIDQSAERVRDQLSV----------------------MAS 563 +++ G + NP +I++ +V D+L + + Sbjct: 373 NWIEMGKGLETKINPLQINYEIEKDNIKVSDELLISNHTKMVKEFFSLLYPDLDARDLRV 432 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 N L+E + ++ ++ L + + D + FLK+ ++ AE + L+++ Sbjct: 433 ANFLLNEFYLSNKIKNIQK--LKNTDFPTMKDYIKFLKSYKFKDKKAE-LYYKDSLNKLS 489 Query: 624 VLLDQ-YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR--PSLLVAVMFSLIIYIEN 680 ++ DQ + NG + +N ++ + + V++ L + + A ++ ++ Y+ N Sbjct: 490 IIFDQDFNNNGIFSNLYNG-HTNINFNKTLTVIDTYNLINNIASNEGQASLYLILSYVRN 548 Query: 681 RM---YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 R+ + + K ++DE R ++ N EF+ +T R++ G+ I TQN DF Sbjct: 549 RISNNFFENKTRKICLIVDEAHRFINANNMSSLEFLFDTVKTIRKYNGSVILTTQNPSDF 608 Query: 738 D-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 + SD+ + + N Y +I +Q+ +Q+Y + Sbjct: 609 ELSDEVMNLTKGMVENIQYTLIFRQNQNGVNAISQMYKSK 648 >UniRef50_C5J6G0 TRSE-like protein n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6G0_MYCCR Length = 879 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/337 (22%), Positives = 143/337 (42%), Gaps = 28/337 (8%) Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE-- 524 F D F + + N N+ + GTSG+GKT + + LI L G ++ D + Y L + Sbjct: 490 FFDQFLQQDSRKNSNLFILGTSGSGKTTITKKLISYNLSIGNHVIILDPQNEYAKLGKLF 549 Query: 525 NMGGVYLDGE-TLRFNPFANITDIDQSAERVRD-QLSVMASPNGNLDEVHEGLLLQAVRA 582 N ++L+G FNP + + +V++ L +++ L+ + + + + Sbjct: 550 NANIIHLNGSGQTVFNPLQIRKIFNPNDSKVKNTNLELLSLNISKLETFFKIIFPELNQI 609 Query: 583 SWLA-KENRARIDDVVDFLKNASDSEQYAES--PTIRSRL-------------DEMIVLL 626 S++A K+ ++ + F + + D +Y + PTI + E +LL Sbjct: 610 SFMALKQAVEKLYEKFGFYELSDDITEYENTFYPTIDDLIQVVKEAEFDFLTKQEKNILL 669 Query: 627 ----DQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII-YIENR 681 ++ N G+ FN+ + + + L + F L + +I+ Sbjct: 670 ASLKSEFNKNSILGKMFNNHSTNYNATQNFAIFNVAALMQLDKKIYQSAFFLTLSFIQGE 729 Query: 682 M--YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD- 738 + + N K + V+DEG + +D N F+ +T R++ G I TQN DF Sbjct: 730 ISDFYMQDNKKIILVVDEGHKFIDESNLFALNFLFDTAKTIRKYNGGLIITTQNPGDFAI 789 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 + +A+ + A N Y I +K+ K + LY + Sbjct: 790 TGEAARKSEAIIENCQYSIFFNLKSKDIEKIDNLYKN 826 >UniRef50_Q2SSU5 Membrane bound ATPase, putative n=1 Tax=Mycoplasma capricolum subsp. capricolum ATCC 27343 RepID=Q2SSU5_MYCCT Length = 955 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 157/765 (20%), Positives = 295/765 (38%), Gaps = 92/765 (12%) Query: 68 AIPINGANESIVEALDHMLRTKLPRGIPLCIHL------MSSQLVGDRIEYGLREFSWSG 121 A +NG + SI+E D L+ KL + + + QL D+ E L + Sbjct: 119 AFEVNGIDLSILEDKDVELKIKLYEQFLKSLDVEVYQIKIDKQLQLDKYEQWLTQHQQGT 178 Query: 122 EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMEN 181 + AE+ + Y+ + L + Y VF S D ++N Sbjct: 179 KNAEKIKQLDD--YINQIKEK-------ELEYNSKFYLVF----------SSKDNQSLQN 219 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDS 241 +K ++ +T + ++ FI+++ +M + ++ + +++Y D Sbjct: 220 AIKNLKIFFSKIELTYKQLENFEFINLLKDMYFDFDKDDFTQQDIKEHIDNIDYLLSYD- 278 Query: 242 FDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPF 301 +LK++ +Y+ E + + L A +P+I++ ++++ +++ Sbjct: 279 -NLKIKNNYMIFANNEYETYISCKTLK-EYASSPDISWFFDISTERGTVVS--------- 327 Query: 302 ILTLTLVVEDQV-KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 ++ + + Q+ + + AN+K +K +K + E EL L G Sbjct: 328 --RISPLKQQQINRMVNNANIKARVNQKLNKQVKLTDVITEEANIDSIQELAANLKLGNE 385 Query: 361 SVVSYFLNITAFCK--DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + FL T F D+ E E +I N F L + F F+ P Sbjct: 386 KL---FLISTTFISFGDSLSDLKENENNIKLELSNNDFVLSNQSFKQFETFINSFPLGLA 442 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFI-DIFFRGMNN 477 K + Q S+ +AN P V +N +G+ N FI D F R N Sbjct: 443 SN-----KNIVLKQEISSWALANSFPFVDNNWTDISGIYFGDTLNYSPFIIDFFKRKSNV 497 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD-MGDGYKSLCENMGGVYLD---G 533 N N V G SG+GK+ ++ L+ +G ++FD + L + G ++ G Sbjct: 498 LNCNATVIGASGSGKSVTMKKLVNFNCVAGIKTIIFDPERTEFLPLIKKWNGQIINVALG 557 Query: 534 ETLRFNP---FANITDIDQSAERV-RDQLSVMASPNGNLDEVHEGLLLQAVRASW--LAK 587 + NP F N+ + + + + + L V+ NL E ++L+A S K Sbjct: 558 NKTKINPLEIFKNVENDNLNINSIISNHLQVLEEWFSNLFSNLEEIVLEAFLISIQNCYK 617 Query: 588 ENRARIDDVVDF----LKNASDSEQYA--ESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 ++ + D+ D + Y E +SRL + +++ + NG Y +N Sbjct: 618 NSKFYNKPIKDWTSQDFPTFDDLKPYVLDEVSKAQSRLIRLEYIINNFVGNGKYANLWNG 677 Query: 642 -DEPSLRDDAKMVVLEL-----GGLEDRP-----SLLVAVMFSLIIYIENRMYRTPRNLK 690 L +D +++ + GG R SLLV ++ + II+ + R P + Sbjct: 678 YTNIDLTND--LILFDFADFGSGGQNTRIKAAQLSLLVKIVDN-IIWNNDLTIRQPIQI- 733 Query: 691 KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAW 750 ++DE + N + R R+ G++I TQNI DF A AR Sbjct: 734 ---IVDEAHTFISSDNTYALNMMSTFARRIRKRNGSFILATQNISDFVKPGAIKDARDII 790 Query: 751 GNSSYKII-------LKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 N+ + I LK ++K+N ++ ++ +G F Sbjct: 791 NNTQFSFIGKLMPQDLKDLDTLYSKFNGFTENEMTNIRTQEVGNF 835 >UniRef50_C8WY82 Type IV secretory pathway VirB4 protein-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY82_ALIAD Length = 659 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 54/329 (16%) Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGE 534 N N + G +GAGK+ L++ L+ G V+ D Y + + +GGV + + Sbjct: 268 VNANGVIIGKAGAGKSFLVKGLVARSAAMGIRHVIVDYEGEYTPMVQALGGVVIRLDEHS 327 Query: 535 TLRFNPFANITDIDQSAE-------RVRDQLSVMASPNGNLDEVHEGL------------ 575 +FNPF + ++ A+ V++++S M ++ +H G Sbjct: 328 PYKFNPFELEEEEEKQADGTIRRFVDVKEKISDMERLIVSMAHLHAGHDLLDSYTRNAIN 387 Query: 576 -LLQAV-----------------RASWLAKENRARIDDVVDFLKNASD--SEQYA---ES 612 +LQ + +W + A+ D +V +K S+ Y E Sbjct: 388 DMLQELYERDFGFTSDPESLYERHETW---QRDAKGDRLVRRVKRPQPRFSDFYVKLEER 444 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 SRL+E+ + L ++ GT G + L+D +V +L L ++ + M Sbjct: 445 AASDSRLEELAMRLRRFREGGTEGMFDCYSNVELQD-VPVVSFDLSHLPEKSMARLLGMQ 503 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 ++ +I + + +LKK VIDE ++L+ H + F+E +R R+ +G+ + +Q Sbjct: 504 VVLEWIMEKFIKKNVHLKKRVVIDEAQKMLEHLYHAI--FMEDVFRRIRKRSGSAVAASQ 561 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQ 761 DF S RA NS KI+L+Q Sbjct: 562 ---DFRKFAESEQGRAILQNSDTKILLRQ 587 >UniRef50_C4G4W2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4W2_ABIDE Length = 605 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 51/351 (14%) Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 L +D + R + TN NM V G +G GK+ ++ +I + G ++ D YK +C+ Sbjct: 217 LVILDTWKRSGDRTNSNMVVLGINGTGKSTAVKHIILNEFMLGKRIIIIDPEREYKDMCK 276 Query: 525 NMGGVYLD--GETLRFNPFANITDIDQSAERVRD--------------QLSVMASPNGNL 568 GG +++ G + NP I S++ +D +LS +A NL Sbjct: 277 ACGGDWINAAGGKGKINPLQ----IKVSSKDTQDDDSYEDNEEDTEEEKLSELAIHLKNL 332 Query: 569 DEVHEGLLLQAVRASWLAKENRARI-------------------------DDVVDFLKNA 603 EV L + ++ + LA R+ I +D+ +++ Sbjct: 333 -EVFFSLYINSLTDTKLAIIKRSLIELYKIFNIDWDTDNSKLKAEDYPIMEDLYNYI--L 389 Query: 604 SDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR 663 S++E+ + + + E I L + A G +N +L DA+ VVL+ L+D Sbjct: 390 SEAERMKDEGDDQFKEYEDIARLFEDVAKGGDSFLWNG-HTTLNSDAQFVVLDTKDLQDS 448 Query: 664 PSLLVAVMFSLI-IYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 + + L+ ++ M R R K + V DE + L+D + + F+ + R+ Sbjct: 449 SERIKGTEYYLLSTWMWAEMSR-DRTEKVVGVFDEAYLLIDKRVPQTLAFLRNASKRCRK 507 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 + G+ I I+ ++VDF + +A +YK I + + QLY Sbjct: 508 YEGSMIIISHSVVDFLDESVKMYGQALLDLPTYKFIFGCDGENLKQTKQLY 558 >UniRef50_Q84BZ8 Putative membrane-bound ATPase n=2 Tax=Spiroplasma RepID=Q84BZ8_SPIKU Length = 888 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 87/342 (25%), Positives = 142/342 (41%), Gaps = 45/342 (13%) Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 + F D F RG + N N GT+G GKT + + + +G ++ D + LC Sbjct: 506 VIFTDQFKRGGDFQNSNALFIGTTGGGKTTTVSKFLNYHIINGRKVIIIDPKREFGKLCN 565 Query: 525 NMGGVYLD---GETLRFNPFANITDIDQSAE---RVRDQLSVMAS------PNGNLDEVH 572 G ++D G FNP IDQ + D L ++ + PN +DEV Sbjct: 566 YHDGNWIDVGSGHKGNFNPLQINAKIDQYQNINTIIGDHLQILETFFHFTHPNLKMDEV- 624 Query: 573 EGLLLQAVRASWLA-------KENRAR------IDDVVDFLKNASDSEQYAESPTIRSRL 619 G L Q + +L K N+ DD+++FL AE + ++ Sbjct: 625 -GFLTQRILDLYLKLGINNEEKFNKMENNDWPIFDDLLNFLTKLEPDLGEAE---MLHKI 680 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 ++I +T G Y +N DD + +L++ L + +L A MF ++ YI Sbjct: 681 TKIIQY--DFTGYGKYAALWNKHSTITLDDNLLNILDIQTLYSKQKVLKAQMFLMLNYI- 737 Query: 680 NRMYRTPRNLKKLNV-------IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 RT N + N +DE ++D N + +F+ + + R G I +TQ Sbjct: 738 ----RTEINNNRFNTDNEIILAVDEAHIVIDKDNPQALKFLFETVKMIRGFNGGVILVTQ 793 Query: 733 NIVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 N+ DF + + A A N+ Y ILK K+ ++LY Sbjct: 794 NLTDFRMTAELEREASAILNNAQYVGILKLKQKDLHDVSELY 835 >UniRef50_C6I0M0 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0M0_9BACT Length = 832 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 41/328 (12%) Query: 456 LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL--DSGGFAVVF 513 A +R + +D + R + N N V G SG+GK+ ++ L+ L AV+ Sbjct: 430 FFAKNHRQEPVSLDFWSRELPNAN--GLVIGRSGSGKSFGVKMLLHQYLLASPDHHAVIV 487 Query: 514 DMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDIDQSAE-----------RVRDQLS 559 + G ++ LC GG Y+ + NPF D+ + + + Sbjct: 488 ENGGDFERLCAFFGGDYVRVDLSGNFSLNPFPLKEDLAREGGLYDPDWMGFLVALIETFL 547 Query: 560 VMASPNGNLDEVHEGLLLQAV-----RASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 + A P + +H G+L Q + R + + R + D+V L + + E Sbjct: 548 ITAHP---VTPLHRGILGQCLGDLYDRLPY--AQGRPSLSDLVRTLFSFRGRDAEDEENA 602 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 +R M L+ ++ G Y FN+ + R ++++ +L GL DR L ++F+ Sbjct: 603 VR-----MAKTLESWS-TGLYAPLFNNPQ-GFRPRSRLLAFDLSGL-DRQEALRGIVFAF 654 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 I + +N + V DE RL+ F+E YRTAR+ G + ++Q+ Sbjct: 655 IAGLSMEKLFREKNRRLYFVYDEAHRLM--TQFSGTGFLEHMYRTARKFGGGVVAMSQSP 712 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQS 762 D+ + S GNSS+K I S Sbjct: 713 EDWLGE---SREGGILGNSSWKWIFPCS 737 >UniRef50_UPI0001713796 hypothetical protein Aasi_0876 n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=UPI0001713796 Length = 368 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 29/277 (10%) Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQSAER-V 554 +I+ +G +V D G Y+SL +GG Y++ + L+ NPF I ++ R + Sbjct: 1 MIKDRYYAGHTVIVIDSGGTYRSLFRALGGKYIEYTSEKPLKLNPFL----IKKTEGRYI 56 Query: 555 RDQLSVMASPNGNLDEVHEGLL---LQAVRASWLAK------ENRARIDDVVDFLKNASD 605 D + N E L + V + L+K E+ + D++ + + Sbjct: 57 PDSYKISFLSNFIAKMWKEDLKNNPIAPVEYALLSKFLTLYYESLPK-DEIPTLTRFCTW 115 Query: 606 SEQYAESPTIRSRL---DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED 662 + Y I + L + +++L+ +T G Y ++FNS E +D++++ EL ++ Sbjct: 116 VKGYVAEEAIDTTLFNINNFLIVLEPFT-QGIYKEHFNSTEVVYLEDSRLLCFELESVKS 174 Query: 663 RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 L V+ L Y+ + P +K + V +EGW +LD ++IE+ +R R+ Sbjct: 175 DSKLYPLVVKVLFDYVMQIVASQPEQIKAIKV-EEGWTMLD---DSSKDYIEELFRKGRK 230 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 A ITQN+ D + SS A A N+S I+L Sbjct: 231 TNTAIWIITQNV---DEIRDSSIAGAMKNNASTFILL 264 >UniRef50_Q120F2 Type IV secretory pathway VirB4 components-like n=1 Tax=Polaromonas sp. JS666 RepID=Q120F2_POLSJ Length = 846 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 111/478 (23%), Positives = 184/478 (38%), Gaps = 54/478 (11%) Query: 287 YSNLLNPELSISCPFILTLTLVVEDQV---KTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 YS ++ +++ C ++L D+ K +A + Y K T + E Sbjct: 275 YSGYMDSLMAVDCEYVLVQCYRFIDRTVAEKAIQDAEMFYRSEVKSVLTRVFERMTDSES 334 Query: 344 EAKEWGELR------QRLGSGQSSVVSY-FLNITAFCKDNNETALEVEQDILNS-FRKNG 395 E G L+ L +S VSY + N+T + E D++ S R NG Sbjct: 335 EKVNTGNLQLAQDAQDALVELTASDVSYGYYNMTILALGTTQKEAENAADLMASNLRANG 394 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA- 454 F ++ R M FL +P A L +L A + N+A+L P+ + P Sbjct: 395 FTILRERQGLMSAFLATMPGNADAILRWKL--------ASTANLADLAPIRTISKGEPTH 446 Query: 455 -------GLLAPTYRNQLAFIDIFFRGMNNTNYNM---AVCGTSGAGKTGLIQPLIRSVL 504 G P L + + NN ++ AV G +GAGKT L+ LI Sbjct: 447 PLFSRLIGHDVPALARFLTPYGVTY-DFNNHETDVGHTAVIGGTGAGKTSLMTLLISMFQ 505 Query: 505 D-SGGFAVVFDMGDGYKSLCENMGGVYLD-----GETLRFNPFANITDIDQSAERVRDQL 558 + G +FDM +GG ++D G+T+ NP + + ++R + Sbjct: 506 KYNPGQTFIFDMKYSLMMATVLLGGKHIDMGGKGGKTIGMNPVKTML-LANDDMQLRQWV 564 Query: 559 SVMASPNGNLDEVHEG-LLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 V+ GN +E ++ A++ + + R+ + + A SP + Sbjct: 565 EVLIGAGGNTISSNESQVIYTAIQGLRRSPPSTWRLSALYALIAGADQDLAAKLSPYVDR 624 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 D+ I +G Y YF++DE + ++V +E+ G+ P L M Sbjct: 625 TDDDEI-------GSGPYASYFDNDEDHFQ-LTQIVGMEVEGILKTPQLASPFMDYAFYN 676 Query: 678 IENRM-YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 IE R+ TP L I+E W +L N E E RT R + TQ++ Sbjct: 677 IERRLDGATP----TLIYIEEAWYML--ANKAFVEKFETWLRTFRSKRAFIVFATQSL 728 >UniRef50_A4V6R2 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6R2_PSEFS Length = 960 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 106/475 (22%), Positives = 193/475 (40%), Gaps = 68/475 (14%) Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIF 471 +PF + K LK + + ES V+++ P+ + P +L Q F+D++ Sbjct: 474 MPFNFRQTSMKLLKRS-IPHLTES--VSHMAPMFVEYQGVPDPAILMNNRAGQPIFLDLW 530 Query: 472 FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV-VFDMGDGYKSLCENMGGVY 530 +N + +CGT+G+GK+ L+ ++ V + D GD Y+SLC + G Y Sbjct: 531 GNSVNTAH--SLICGTTGSGKSFTFNNLLMALRVKYRPKVWIIDKGDSYESLCLVLNGNY 588 Query: 531 LDGETLRF--------------NPFA--------NIT-DIDQSAERVRDQLSVMASPNG- 566 + T RF NPFA N+ ++D+ R + +M + +G Sbjct: 589 VRLTTERFVEPVSGRTIDPICINPFALKRDENNRNVKPELDEIFFVARMLIMMMEAGDGS 648 Query: 567 -----NLDEVHEGLLLQAVRA---SWLAKE--NRARIDDVVDFLKNASDSEQYAESPTIR 616 NL +V LL QA+ W+ + R D + L + EQ E Sbjct: 649 GSTKSNLTKVTSSLLYQALEEFYRDWVETRPMDEPRFRDFIPHLIKTNFHEQKGEV---- 704 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL---LVAVMFS 673 L + + L Y G + F+ + + VLE + P+L +A+ Sbjct: 705 --LAQNLTL---YYGTGPFAAIFDG-YLDVDWENDFTVLETQRMSKSPALGIVTLALFRQ 758 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 + +Y + ++ R+ KK+ +DE W L N + + YR RR+ + I+Q Sbjct: 759 IDLYCK---FKLDRSRKKVVAVDEAWATLSDPN--AAKALSSFYRELRRYGAGCLLISQT 813 Query: 734 IVDF------DSDKASSAARAAWGNSSYKIILKQSAKEF--AKYNQLYPDQFLPLQRDMI 785 + DF ++ + N+S+ L S ++ AK + D+ + L R + Sbjct: 814 VKDFVNLIKAETSGGGDSQDGILENTSHYFFLACSESDYRVAKEELAFTDEEIDLWRSLA 873 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 + ++ Q +S RLF P++ + SS D+ +++ R E + Sbjct: 874 SLPPMYSEVFYRMRTSQSLYYSGVFRLFSAPMTLWIASSHPDDYR-MRELRTEAI 927 >UniRef50_Q98QH8 TRSE-LIKE PROTEIN n=1 Tax=Mycoplasma pulmonis RepID=Q98QH8_MYCPU Length = 853 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 68/349 (19%), Positives = 154/349 (44%), Gaps = 46/349 (13%) Query: 456 LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM 515 L T +++ +DIF + + N+N + GTSG+GK+ L + ++ + + SG ++ D Sbjct: 475 FLGKTEQDENIILDIFTKNDDRKNFNTFILGTSGSGKSTLAKKILANQITSGNKVIIIDP 534 Query: 516 GDGYKSLCENMGGVYLD---GETLRFNPFANIT----DIDQSAER----VRDQLSVMASP 564 + Y + + + G ++ NP I D + S +++ ++ Sbjct: 535 ENEYATFSKRLNGENINLNINSDKSLNPLEIIDNFLDDFETSKNNHLMWLKEWFKILYKE 594 Query: 565 -----------NGNL---DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYA 610 N NL DE+ L ++ ++ ++ I D++ LK+ D Sbjct: 595 LNEEDLRRIIFNVNLLYSDEI----FLSKIKDKSISSKDFPIISDLIKILKSNDDKS--- 647 Query: 611 ESPTIRSRLDEMIVLLD-QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS--LL 667 L ++I +L+ + NG + + +N + +L + +VV+ + + + S L Sbjct: 648 --------LKKIINILEFDFENNGKFSKLYNKSK-NLNFENNLVVINVKDIYETTSKEFL 698 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVI-DEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 + +F+++ +I+ + +KL + DE +D N + F+ + + R++ G+ Sbjct: 699 INSLFTILGFIQREINLNRFKKEKLVIFFDEAHLFIDKDNLEALNFLFRTIKRIRKYNGS 758 Query: 727 YITITQNIVDFDSD-KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 I TQN DF+ + + S + A N+ Y L +++ + ++++ Sbjct: 759 VILATQNPSDFNLEGEVSRKSLAIISNTQYTFFLNLRSEDISNVSKMFS 807 >UniRef50_C9RCA0 AAA ATPase n=1 Tax=Ammonifex degensii KC4 RepID=C9RCA0_AMMDK Length = 569 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 106/440 (24%), Positives = 172/440 (39%), Gaps = 69/440 (15%) Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 DN LE N + E+ F + F LP M L G V+ Sbjct: 108 DNRSKELE------NILARKAAEVRPLVFRQLEGFKNTLPVMT-----YSLSSPGAVRNL 156 Query: 435 ESFNVANLMPLVADNPLTPAG-LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 +P+ A P+G L T F D F N ++A G +G+GK+ Sbjct: 157 TLGGAMACLPVTASELSHPSGAFLGFTSTGAPVFFDPFVGPPWLPNPHVAAFGYTGSGKS 216 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG---VYLD-GETLRFNPFANITDIDQ 549 ++ LI + +G VVFD Y+ C + G + L+ G NP + + D Sbjct: 217 VTLKLLIGRLSLAGVRFVVFDPEGEYRRPCRELWGGEVITLEAGVPAGVNPLDLLPEKDP 276 Query: 550 SAER-----------VRDQLSVMASPNGN--LDEVHEGLLLQAVRASW-----------L 585 R VR ++ +A G L LL AVR + L Sbjct: 277 DTGREVVNVADKVADVRALVATIARGFGGRELTPQEVSLLEAAVRELYSERGVTSDPESL 336 Query: 586 AKENRARIDD---VVDFLKN-------ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTY 635 + RA D V LK A+ E++ E+ +R ++LD + + Sbjct: 337 YERGRALPDGSFAVGRVLKRMPRLSDLAAKLERWPETKDLR-------LILDPFLEGSSL 389 Query: 636 GQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVI 695 G + + L DA +VV +L ++D + L A MF ++ + +R + KK+ V+ Sbjct: 390 GMFDCETDKEL--DAPVVVFDLSRIKDEFTKLYA-MFVVLTWCWHR-FALRHAGKKMVVL 445 Query: 696 DEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSY 755 DE W + + +F+E R R+H + +Q+I +F A RA + + Sbjct: 446 DEAWMFAKWPDS--AKFLETLARRGRKHRTGLVVASQHIEEF---LAREEGRAVISSCAT 500 Query: 756 KIILKQS---AKEFAKYNQL 772 +IIL Q+ A+E A+ +L Sbjct: 501 RIILGQNPTVAREVAEAFRL 520 >UniRef50_B2TS95 Putative uncharacterized protein n=8 Tax=Clostridium RepID=B2TS95_CLOBB Length = 637 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 85/367 (23%), Positives = 159/367 (43%), Gaps = 65/367 (17%) Query: 453 PAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA- 510 P G+ L T D+F + +YN V G G+GK+ L++ +L++ G Sbjct: 218 PTGMYLGTTKTGGNVIFDLFTKDDIRKSYNALVIGLMGSGKS----TLLKKILNNNGIVN 273 Query: 511 ---VVFDMGDGYKSLCENMGG--VYLDGETLRFNP---FANITDID-------QSAERVR 555 +FD+ +K+L +GG + LDG NP FA I D D QS + Sbjct: 274 NTIRIFDIAGEFKTLVRILGGEVIALDGSDGIINPLQIFATIIDEDTNEILEEQSYMQHL 333 Query: 556 DQLSVM---ASPNGNLDEVHE----------GLLLQAVRASWLAKENRARIDDVVDFLKN 602 ++S+M +PN N +E+ E + +A+ ++++++FL N Sbjct: 334 SKVSMMYQFLAPNANSNEIREFEKSLSNFYSSFGIDTRKATQYETNEYPIMEELIEFLLN 393 Query: 603 A--SDSEQYAESPTI----RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD--DAKMVV 654 + ++ I + RL+ +I+ L+ + YG+ FN +++D + ++V Sbjct: 394 ELYENVQKGILKANITNNRQERLENIILTLEGTVRD--YGKLFNG-HTTIKDITNKQIVS 450 Query: 655 LELGGL-EDRPSLLVAVMFSLIIY----------IENRMYRTPRN-----LKKLNVIDEG 698 E+ L + + A F+++ +E + + R +K L ++DE Sbjct: 451 FEVRNLVQFDKRIFNAQTFNILTMLWNNALLQGLVEKKAFDEGRKTTMEAIKYLVLMDEA 510 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA----RAAWGNSS 754 + ++ N +++ R AR++ G I TQ+I D D SS A R + + Sbjct: 511 HKFINSNNIMAVDYLINFEREARKYFGGLIFATQSIRDVVPDNTSSEALEKIRTLFELTQ 570 Query: 755 YKIILKQ 761 YK I++Q Sbjct: 571 YKFIMQQ 577 >UniRef50_D2QVN3 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVN3_9SPHI Length = 792 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 112/517 (21%), Positives = 214/517 (41%), Gaps = 75/517 (14%) Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAK--EWG 349 N L + P +L + ++ED +E + ++ E+K + + + E + K E Sbjct: 224 NLALDLQVPHLLVTSFLIED-----TEKVIGSLEFEQKINRN-LDFLMTHENKIKMLELE 277 Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 + L + S++S L++ + DN V++ I SFR G + N Sbjct: 278 DYIDGLRTDNKSLISVNLSLVVWNTDNKLREGLVQRGIA-SFRAMGGADVFVETMDTTNL 336 Query: 410 LTCLPFMAGKGLFKQLKEAG-----VVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQ 464 L G ++ L +G + A ++ AN L++D P Sbjct: 337 FFALAPGNGYQNYRWLLMSGDNAACYLNCATNYRTANQGELLSDRYGNPI---------- 386 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 +++F +NN N V G +G+GK+ + + ++G ++ D+G Y SL Sbjct: 387 --LVNLFNTDLNNQN--SVVVGPTGSGKSFTMGYFMLQRYEAGRRQIIIDVGGTYYSLMT 442 Query: 525 NMGGVYLDGET---LRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR 581 +GG Y + ++FNPF + + D+++ +++ + + ++ + QA R Sbjct: 443 ALGGRYYQYDPQNPIKFNPFGILVNSAGQYVPDGDKINFLSTLLAIIWKGYKRPVRQAER 502 Query: 582 ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQY--TANGT----- 634 + + R+ + N + PT L L QY GT Sbjct: 503 SVLV------RLIPMYYEWYNTQIEQDPGNPPTPVPSLVGFYDFLYQYLKEKEGTEELVR 556 Query: 635 ------YGQYFNSDEPSL----RD--DA---------KMVVLELGGLEDRPSLLVAVMFS 673 + ++F EP + RD DA ++V ++ ++D LL +V+ Sbjct: 557 WHKAFDFAEFFTCLEPFVVGHYRDVLDAGENEDISGYRLVCFDMARIKDN-ELLKSVVTM 615 Query: 674 LIIYIE-NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 LI + + + R P+++K L +DE W +L + +G+F+E YRT R++ G+ ITQ Sbjct: 616 LITELSLDVIRRYPKDVKYL-YMDEAWSML---SEGMGDFVEMMYRTIRKNNGSMCIITQ 671 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIIL-KQSAKEFAK 768 + + + S+ N+ KIIL Q K+ + Sbjct: 672 GVKEIED---SAVGPVIIANADTKIILNHQDTKQLDR 705 >UniRef50_C3N6R5 AAA ATPase n=8 Tax=Sulfolobaceae RepID=C3N6R5_SULIY Length = 624 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 10/137 (7%) Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR 684 LL+ T + Y F PSL++ K V+L L + R L A M L++Y + + + Sbjct: 442 LLNMTTGSDKY--VFQGSPPSLKN-KKFVILGLKTEDTRKKRLAATM--LMLYAYSLINK 496 Query: 685 TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASS 744 PR+++KL +IDE L ++++ V + I YRTAR + IT+TQ I ++ + S Sbjct: 497 LPRDVEKLILIDEAHFLFEYQS--VAKIIAIIYRTARALRTSMITMTQLIQHYNMNNYS- 553 Query: 745 AARAAWGNSSYKIILKQ 761 R AW + K+ILKQ Sbjct: 554 --REAWQLADNKLILKQ 568 >UniRef50_A6NYK4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYK4_9BACE Length = 870 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 44/331 (13%) Query: 461 YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD--MGDG 518 + N L +D F +N N N +CGTSGAGKT +Q + + G + G Sbjct: 452 HNNSLCIVDPFNTKVNK-NANFTICGTSGAGKTFTMQLMSLRLRMRGVQCYILAPLKGHE 510 Query: 519 YKSLCENMGGVYLD---GETLRFNPFA---------------NITDIDQSAERVRDQLSV 560 +K C +GG Y+ G + N + +DID + QL + Sbjct: 511 FKRACHKIGGTYIKLAPGSSACINVMEIRPTLTPEMELIDELDYSDIDSMLAKKIQQLMI 570 Query: 561 MAS---PNGNLDEVHEGLLLQAVRASW----LAKENRARIDD----VVDFLKNASDSEQY 609 S P+ + +E E LL +A+ ++ + +N + +D V + D + Sbjct: 571 FFSLLIPDMSNEE--EQLLDEALVKTYANFGITHDNSSIYEDPGSGKVKTMPILGDLYEV 628 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 + + +RL ++ +A Q FN + ++ + VVL++ L+ + L V Sbjct: 629 LKESPLTARLATIVSRFVTGSA-----QSFNR-QSNINLSNRYVVLDISELKGK-MLPVG 681 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK-NHKVGEFIEKGYRTARRHTGAYI 728 +M +L Y+ +++ + R KK+ IDE W+L+ N + EF + ++ R + G + Sbjct: 682 MMIALD-YVWDQV-KADRTKKKMVFIDEIWKLIGGSANRQAAEFCLEIFKIIRGYGGGAV 739 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 TQ++ DF + R+ NS KIIL Sbjct: 740 AATQDLSDFFGLEDGRYGRSILNNSKTKIIL 770 >UniRef50_Q2NC54 Type IV secretion system protein B4, putative n=7 Tax=Alphaproteobacteria RepID=Q2NC54_ERYLH Length = 812 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 24/279 (8%) Query: 470 IFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGV 529 FF N N +V G SG+GKT ++ L ++FD G + +GG Sbjct: 428 FFFNFHNGDLGNFSVIGPSGSGKTVVMNFLAAQAQKFAPRTILFDKDRGAELFVRGIGGR 487 Query: 530 Y---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA 586 Y GE FNP A + D + +RD L V+ G +E+ + AV A++ Sbjct: 488 YDRIYAGEPTGFNPLA-LPDSAANRAFLRDWLGVLLKAEGP-EELQT--IAHAVDAAY-- 541 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 EN A + + +F + S S R ++ L + +G + F++ L Sbjct: 542 -ENDASLRQLRNFRELLSGSR--------RPEPGDLPDRLSAWIHSGEHAWLFDNQRDEL 592 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 D + + ++ L + P L M L IE R+ P + +IDEGW+ LD + Sbjct: 593 DLDNRTLGFDMTALLENPKLRTPTMMYLFHRIEERLDGNP----AMILIDEGWKALD--D 646 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 I +T R+ TQ+ D + S+A Sbjct: 647 EVFAARIRDWLKTLRKRNALVGFATQSAADALESRISTA 685 >UniRef50_A8ZR82 Type IV secretory pathway VirB4 component, ATPase TRAC n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=A8ZR82_DEIGD Length = 841 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/357 (21%), Positives = 144/357 (40%), Gaps = 37/357 (10%) Query: 436 SFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 S NVA+++PLV P + +R++ + NY + G++G+GKT + Sbjct: 409 SVNVAHMVPLVG--PWRGSNKPIAVFRSRWGSLTGLNPADGTLNYGTLIVGSAGSGKTFM 466 Query: 496 IQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG----------GVYLDGETLRFNPF---A 542 Q G ++ D Y+S ++G G ++DGE +R+N F Sbjct: 467 TQGWAARTGALGAEFIIVDQKRDYESFIASLGEDGQFIPFAPGEFVDGEVVRYNAFELPE 526 Query: 543 NITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR----------AR 592 + D++ + +L + + ++ A+ ++A R Sbjct: 527 GEFEPDENHKMFLLGFITALLGEEDLGSIEKAIVTAAIEQVYIAAVTRNGQGQVIYTPVT 586 Query: 593 IDDVVDFLK--NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 + V LK NA +E + ++ + + + L Y + G + + E ++ +A Sbjct: 587 LSKFVRTLKNLNAVGTESLRDFEEAQTTIRRLAMSLQTYIGDTPMGTFLDG-ESTICMNA 645 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVG 710 K V ++ + ++ L + +I I +R P + K+ VI+E L FK Sbjct: 646 KYVYFDIAKIREQQDLTRVALLLIIKQIWDRAKAHPDRV-KVAVIEEIGVL--FKIQAAL 702 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA 767 +F+ Y+ R + + +TQ I DF K N+S II K SA+E A Sbjct: 703 DFVATLYKLGRAYNLWPVGVTQEIADFQLGK------GLINNTSQFIIGKVSAEEAA 753 >UniRef50_C3CTH0 Type IV secretory pathway VirB4 component-like protein n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTH0_BACTU Length = 622 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 82/342 (23%), Positives = 143/342 (41%), Gaps = 51/342 (14%) Query: 466 AFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL-IRSVLDSGGFAVVFDMGDGYKSLCE 524 ID + R N N N+ V G +G+GKT + L +RS L G V+ D YK L Sbjct: 215 VLIDFYDRNKLN-NSNITVFGQAGSGKTFFVSLLTMRSAL-RGVRTVIIDPEGEYKPLTR 272 Query: 525 NMGG--VYLDGETLRF-NPFANITD--IDQSAE------RVRDQLSVMASPNGNLDEVHE 573 +GG +Y+ ++ F NPF T+ +D E +V D L+++A G L Sbjct: 273 ALGGAHIYVAPDSKHFLNPFDVETEYNVDTGKEEIDLKSKVADLLNLVAVMAGGLTPEQR 332 Query: 574 GLLLQAVRASWLAKENRARIDDVVD-----------------------FLKNASDSEQYA 610 ++ + + K + D + D F + E YA Sbjct: 333 SIVGHNLAKVYKDKGFTSAPDSLYDNEPYFDELTGEFSETGRKRQMPRFTDFHDEFESYA 392 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQY--FNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 L+ + L + G Y + + S+E + DA +V ++ LE+ S+L Sbjct: 393 RKEQ-NKELESLANALKIFKEGGVYDMFDCYTSEELANFKDAPIVTFDISRLEE--SVLR 449 Query: 669 AV-MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN----HKVGEFIEKGYRTARRH 723 + MF + + + + ++KK V DE W L++ KN +F+E R R+ Sbjct: 450 PIGMFVSMSWTWEKFAKKNPHIKKRIVCDEAWMLVN-KNMAGFEYTSQFLENCSRRIRKR 508 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 G + +QN ++F +++ +A N+ I L+Q + + Sbjct: 509 NGGLLVASQNFIEFANNE---QGKAVLTNAVVNIFLRQDSTD 547 >UniRef50_Q6MU50 Transfer complex protein TrsE n=2 Tax=Mycoplasma mycoides group RepID=Q6MU50_MYCMS Length = 814 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/340 (21%), Positives = 138/340 (40%), Gaps = 49/340 (14%) Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVF-DMGDGYKSLCENMGGVYLD---GE 534 N N + SG+GKT + ++ ++F D + Y LC G +++ G Sbjct: 425 NANTTIIAKSGSGKTASTLAIADRLISQNKTKMMFIDPDNDYLKLCSKYNGKHINLGSGF 484 Query: 535 TLRFNPFANITDIDQSAERVRDQLS-------------VMASPNGNLD----------EV 571 R NP + + ++ + L V+++ L+ E+ Sbjct: 485 ESRINPLQILYHLKDETKKNKSHLKGESDVKLINSNEVVISNHIAFLEHFFDIINPNYEI 544 Query: 572 HEGLL--LQAVRASW---------LAKENRARIDDVV----DFLKNASDSEQYAESPTIR 616 + +L ++++ W L + I+D++ DF K+ ++Y Sbjct: 545 NRYILKMIKSLYTRWDFISKDLFNLKTTDWPTINDLINEFYDFKKDRKKEDEYVNEAMWN 604 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL--EDRPSLLVAVMFSL 674 + L+ L D++T G +N D++++V ++ L + ++ A + L Sbjct: 605 NALE---FLKDEFTGFGKLSHLYNGHSTLNTQDSEVIVFDIKTLIESNNFKIIQAQIMLL 661 Query: 675 IIYIENRMYRTPR--NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 + +N + N + VIDE L+D +N EFI+K + R+ G ITQ Sbjct: 662 TAFTQNEFELNSKLSNKNTILVIDEAHLLIDAQNPIALEFIKKTTKRVRKKRGGIWLITQ 721 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 NI DF + + +RA N YK+ L+ ++E K +L Sbjct: 722 NINDFSDPRILAQSRAILSNMQYKLFLQMDSEEIEKLAEL 761 >UniRef50_Q4A7V5 TRSE-like protein n=2 Tax=Mycoplasma hyopneumoniae 7448 RepID=Q4A7V5_MYCH7 Length = 820 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 76/348 (21%), Positives = 142/348 (40%), Gaps = 51/348 (14%) Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE-- 524 F + F++ N N+ + GTSG+GKT + + LI L G +V D + Y + + Sbjct: 428 FFNQFYQKGVRKNSNLFILGTSGSGKTTITKKLIIYNLAIGNSVIVLDPQNEYSKIGKKT 487 Query: 525 NMGGVYLDGETLR-FNP------FANITDIDQSAERVRDQLSVMASP--------NGNLD 569 N ++L+ L FNP F + D+ + D +++ S +L Sbjct: 488 NANIIHLNSSGLTVFNPLQIRKTFNPNSSEDEDSFLNSDLIALHISKLETFFRIIFPSLK 547 Query: 570 EVHEGLLLQAVRASW---------------LAKENRARIDDVVDFLKN-----ASDSEQY 609 VH +L +++ + L E I D+++ +K SD+++ Sbjct: 548 NVHFIAILNSLKILYQNFGFFEIKDIDITKLENEEYPIISDLIEIIKENEFDYLSDNDKK 607 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLV 668 + + E +L G+ FN + + K + + L + + Sbjct: 608 VLIASFETDFGEYSIL----------GRMFNDVSSTNEINTKFSIFNVAALMNLEKRVYQ 657 Query: 669 AVMFSLIIYIENRM--YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 A F + +I+ ++ + N K + V+DEG + +D N F+ +T R++ G+ Sbjct: 658 AAFFLALSFIQGQISEFYLESNRKIVLVVDEGHKFIDETNLFALNFLFDTAKTIRKYNGS 717 Query: 727 YITITQNIVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 + TQN DF + +A+ + A N Y I +K+ K N LY Sbjct: 718 LMIATQNPGDFAITGEAARKSEAIIENCQYSIFFNLKSKDIEKINLLY 765 >UniRef50_B3DVA0 Type IV secretory pathway, VirB4 component n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVA0_METI4 Length = 889 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 39/307 (12%) Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG--VYLDGETLR-F 538 + + G G+GK+ L Q ++ L + ++ D G+ Y L E GG + LD T + F Sbjct: 482 LYISGVKGSGKSALAQIIVLRHLRPDSWLIILDKGNSYDRLVELSGGTTIRLDMATPKCF 541 Query: 539 NPFANITDIDQSAE----------RVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWL-- 585 NPF T + E +V + L ++A S G + E +L+++ Sbjct: 542 NPFEVYTQRNSKGELIEPSDHELIKVVNCLEILATSQRGEPLRIEEKNILESLTRQTFSN 601 Query: 586 AKENRA---RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 A +NRA +DD + +D++ AES +++ +D G Y ++FN Sbjct: 602 AIKNRATYVTLDDFARQMAYRADAQFLAES--LKAFVD------------GRYKRWFNGT 647 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + K++ + + L A++ ++++ + + P K L V E W+ Sbjct: 648 T-QVHWKTKVIHFDFEYISKDKDLAAALIPMAVLFVSDIILSHPHVFKML-VFGEMWQ-- 703 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 N I + ++T R+ A I +Q I+D + A A+A N I+ Q Sbjct: 704 HVSNPATANLIIEAFKTYRKKRCAIIGESQAILDLVDNPA--VAKAVIQNVDTWILFPQG 761 Query: 763 AKEFAKY 769 ++ ++ Sbjct: 762 SEHHIEF 768 >UniRef50_B0T8Q5 Putative conjugal transfer protein TrbE n=2 Tax=Alphaproteobacteria RepID=B0T8Q5_CAUSK Length = 812 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 88/362 (24%), Positives = 156/362 (43%), Gaps = 55/362 (15%) Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA------DN 449 F +I R N + +L LP + +++ + + N+A++ PL A N Sbjct: 362 FSIIKERINAVEAWLGTLPGQT----YANVRQPPL----STLNLAHIAPLSAVWAGPSSN 413 Query: 450 PL--TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL-IRSVLDS 506 P P L+A T + + + + +T V G +GAGK+ L+ L ++ + Sbjct: 414 PHLGGPPLLMAKTEGSTPFRLSLHAGDVGHT----LVVGPTGAGKSVLLALLALQFRRYA 469 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLD-GETL---RFNPFA--NITDIDQSAERV--RDQL 558 G V FD G ++ MGGV+ D G L +P A ++ +D AERV D + Sbjct: 470 GARIVAFDFGGSIRAAALGMGGVFHDLGGVLLDAERSPVALQPLSRVDDPAERVWASDWI 529 Query: 559 SVMASPNGNLDEVHEGLLLQAVRAS-WLAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 +V+ S G + + AVR W A + A ++ + + A PT+ Sbjct: 530 AVLLSGQGVV-------VTPAVRDHIWSALASLASAP-----IEERTLTGLVALLPTL-- 575 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 ++ L YT G +G+ ++D +L A + E GL P+ +++ Y Sbjct: 576 ---DLKSALTPYTLAGPWGRLLDADFEALAAGA-VHAFETEGLLGTPA-----APAVLAY 626 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 + +R+ R L +IDEGW L + G + + +T R+ + + TQ++ D Sbjct: 627 LFHRIERDLDGRPTLILIDEGW--LALADPAFGAQLREWLKTLRKKNASVVFATQSLTDI 684 Query: 738 DS 739 D+ Sbjct: 685 DA 686 >UniRef50_C9LWN3 Putative conjugal transfer protein TrbE part 2 n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWN3_9FIRM Length = 821 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 117/545 (21%), Positives = 207/545 (37%), Gaps = 86/545 (15%) Query: 353 QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 Q LG +S Y + + +D + LE IL S G+ N M ++ Sbjct: 334 QELGQDYTSYGYYTMTVMVSDEDQGK-CLEKANRILESINSLGYTAYIETDNSMESWWGS 392 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG------LLAPT--YRNQ 464 +P G ++ +V S N +L P+ A T +G L P Y + Sbjct: 393 IP-----GCYRANIRRPIVS---SLNFCHLAPVTA----TWSGDKRNECLKGPVLLYTDT 440 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV-VFDMGDGYKSLC 523 + + +CG +G+GK+ L+ L L V +FD ++L Sbjct: 441 TGYTPFRLSLHVGDVGHTLICGRTGSGKSVLLNTLEVHFLKYPNSNVFIFDKAASSRALT 500 Query: 524 ENMGGVYLD------GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL 577 +GG + + GE L F P A++ D ++ L + N + + + Sbjct: 501 LAVGGNFYNIASEGSGE-LSFQPLAHVEDEKETKWAKEWILGYLNLKNITITPAKDNFVW 559 Query: 578 QAVRA-SWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYG 636 +A+ + KE R + F + D E IR L + T G YG Sbjct: 560 KALLSLREFPKEQRT----ISTFCEMVQDQE-------IRQALAAL-------TVKGAYG 601 Query: 637 QYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 + F++++ + + V E+ L P+++ + + L IE ++ + + L ++D Sbjct: 602 KLFDNNK-DISGIGRWQVFEMETLMATPAIVPSTLEYLFHRIETKLQKA--SGPSLIIMD 658 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E W L F N E I++ ++ R+ + I TQN+ D + A N K Sbjct: 659 EAW--LFFDNPMFKEKIKEYFKDMRKKNTSIILATQNLTDLSA--KPELLSAVLNNCPNK 714 Query: 757 IILKQSAKEFAKYNQLYPDQFLPL---QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 I L + K ++Y + Q D+I +D ++SS E + RL Sbjct: 715 IYLSDKEAKTEKSQEIY--RMFGCNEKQMDIIANMEPKRDYYYSS-----EKGNRIFRLA 767 Query: 814 VDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWL------EE 867 + P+ + FV K+ +++ Q A ++S +E WL +E Sbjct: 768 LQPI----------ELPFVTATAKKDQQAMDSILQSAGRES-----FIEEWLKYKDCQDE 812 Query: 868 HEKYR 872 E YR Sbjct: 813 WEDYR 817 >UniRef50_A4XMV0 AAA ATPase n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV0_CALS8 Length = 590 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 85/419 (20%), Positives = 160/419 (38%), Gaps = 63/419 (15%) Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 G + F + +++CLP A + LK E F LM A L P Sbjct: 152 GLNMRCLSFEQAKGYISCLPLGA-----RNLK------YIEKFR---LMTTSATACLFPV 197 Query: 455 GLLAPTYR-----------NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV 503 G TY N F + F R + N + MA+ GT+GAGK+ ++ ++ + Sbjct: 198 GNTDITYEEGFYIGYNAITNSPVFYNQFDRSLPNPH--MAIFGTTGAGKSTTMKTMLGRM 255 Query: 504 LDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPF---------ANITDIDQSA 551 G V D Y+ + +GG Y+ GE L NPF D++ Sbjct: 256 AAYGYNICVLDPEREYEKIINKLGGKYIRIRPGEKLGINPFDVEIEEEEGKRFIDLNSKV 315 Query: 552 ERVRDQLSVMAS--PNGNLDEVHEGLLLQAVRASWLAK---------ENRARIDD----- 595 +R L++++ LD V ++ + VR + K AR D+ Sbjct: 316 ADIRFILNIISEYYVGRRLDGVQMAIIERIVRKLYYDKGITSDPESLYTSARTDEKGRLI 375 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 V K + E S + ++ + G+ + + ++ D K++ Sbjct: 376 VGKIKKELPTLSELREELFKESETQALAKAMEVFVGEGSLSLF--DCQTTIDADDKIIAF 433 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 +L E L +++ +I N+ + KK+ + DE W ++ E++E Sbjct: 434 DLKEFERDNFLKFFASVNILSWIWNKFSNAKLKGQKKVVIFDEAWMFTRYQAS--AEYLE 491 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 R R++ + + +Q +++F + RA + KI+++Q + A+ + + Sbjct: 492 FISRKGRKYKISLMIASQTLLEFLQN---DTGRAIINMCASKILMRQESDMAAQIAEFF 547 >UniRef50_B9MP37 AAA ATPase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP37_ANATD Length = 621 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 88/424 (20%), Positives = 158/424 (37%), Gaps = 83/424 (19%) Query: 399 ISPR---FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG 455 + PR F +R +L LP G+ + E++ M + P G Sbjct: 181 LKPRALTFRQLRGYLATLPL-------------GLQKHTENYKT---MTTGSSACCVPTG 224 Query: 456 LLAPTYRNQLAFIDIFFRGMNNTN-----YN----------MAVCGTSGAGKTGLIQPLI 500 Y+N + F G N T YN +AV GT G+GK+ ++ ++ Sbjct: 225 NTEVYYKNGI------FLGYNLTTGAPVFYNQFDDSLLGPHVAVFGTIGSGKSTTMKTML 278 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPF---------ANITDID 548 G +A V D YK L +GG Y++ G NPF +I+ Sbjct: 279 ARSAAFGFWACVLDPEGEYKKLINMLGGKYVEVKAGGKAGINPFDLEIEEDEGKRFINIE 338 Query: 549 QSAERVRDQLSVMASP--NGNLDEVHEGLLLQAVRASW-----------------LAKEN 589 +R L +++ LD + Q+VR + + + Sbjct: 339 GKISEIRFLLGIISESFMGKRLDGTQLSKIEQSVRKLYADFGITKDPESLYSNMKVDETG 398 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD 649 + + V L SD + + +L + +L+ +T GT G + + +++ Sbjct: 399 KIYVGKVKKVLPTLSDLRRELSNFEETKQLAD---VLEIFTGEGTLGLFDCQTDIEIQEH 455 Query: 650 AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM-YRTPRNLKKLNVIDEGWRLLDFKNHK 708 ++V L + P L ++ +I N+ + R K+ V DEGW +++ Sbjct: 456 DRIVGFNLKEFDKDPFLKFFASVVIMNWIWNKFSHEKMRKYNKIVVFDEGWMFTKYQS-- 513 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS---AKE 765 +++E R R++ + + +Q I++F + R K +LKQ AKE Sbjct: 514 TNDYLESISRRGRKYHISLMIASQTILEF---LRTETGRTMLNMCHSKFLLKQEPDLAKE 570 Query: 766 FAKY 769 A Y Sbjct: 571 TATY 574 >UniRef50_Q601R8 Transfer complex protein n=7 Tax=Mycoplasma RepID=Q601R8_MYCH2 Length = 880 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 74/344 (21%), Positives = 138/344 (40%), Gaps = 42/344 (12%) Query: 466 AFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCEN 525 F D+F + + N N + GTSGAGK+ + + L+ +V D + Y + +N Sbjct: 485 VFFDLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLDPQNEYWKIGDN 544 Query: 526 MGGVYLD---GETLRFNPFA-----NITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL 577 + ++ G+ FNP N + AE + +A NL++ G+LL Sbjct: 545 LNANRINFGGGDLTIFNPLQIQKVFNPQSKQEEAEDFNNS-ETIALHLQNLEKFF-GILL 602 Query: 578 QAVRASWLAKENRARIDDVVDFLKNASDSEQYAES--------PTIRSRLD--------- 620 + + A I+ + + KN + + PTI + Sbjct: 603 PNLEHKMVM----AVIETINEMYKNRGFYVLFEDVCLLEPDKFPTITDLIQKFQELNFDY 658 Query: 621 ----EMIVLLD----QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 E ++L ++ G + FN +L +V+ + L + F Sbjct: 659 ITDFEKTIILSTLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMHLEKRIYQSAF 718 Query: 673 SLII-YIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 L++ +IE ++ +N K + ++DE R +D N +F+ K +T R++ G+ I Sbjct: 719 FLVLSFIEGKIATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTIRKYNGSLIIT 778 Query: 731 TQNIVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 TQN DF S +A+ + A N Y + + K ++L+ Sbjct: 779 TQNPGDFAISGEAARKSEAIIENCQYAFFFNLKSNDIEKVDKLF 822 >UniRef50_C7LKR7 Putative membrane protein n=3 Tax=Mycoplasma RepID=C7LKR7_MYCML Length = 947 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 71/310 (22%), Positives = 122/310 (39%), Gaps = 34/310 (10%) Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GE 534 TNYNM G+SG GK+ ++ I S L V D + Y L G +D G Sbjct: 567 TNYNMFTVGSSGKGKSTDVKKAIVSNLAQNNKVYVIDPQNEYAKLGHKFGATIIDLGSGY 626 Query: 535 TLRFNP-------------FANITDIDQSAERVRDQLSVMASPNGNLD----------EV 571 NP + + I++ E + S++ +P+ N D E+ Sbjct: 627 NTTINPLQVQIQLFEEDQKLSIDSIINKHLEWIETFFSLI-NPDWNQDQLVLVMEFVKEL 685 Query: 572 HEGLLLQAVRA-SWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT 630 ++ L +RA L N I D++ ++N +++ E + + + L + Sbjct: 686 YKNKGLYKLRAYKSLESFNYPIISDLIKLMRNYKFVDEFEEQRKKLTLANIIDRLSYNFE 745 Query: 631 ANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAV-MFSLIIYIENRMYRTPRNL 689 NG Y +N+ + ++ ++ L + S V +F L+ +I+N+++ Sbjct: 746 YNGKYHHIYNA-QTNIDLSNDFIIFNTQKLFNTSSSNGKVGLFVLLSFIQNKIFNNAIEF 804 Query: 690 KKLN---VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF-DSDKASSA 745 N VIDE +D N +F+ +T R+ I TQN DF S + Sbjct: 805 ANTNTVLVIDELHMYIDPNNPATLDFVYSMTKTVRKFNAGMILCTQNPSDFLGSSMITKK 864 Query: 746 ARAAWGNSSY 755 A A N Y Sbjct: 865 AEAILQNCQY 874 >UniRef50_B6A599 Type IV secretion/conjugal transfer ATPase, VirB4 family n=2 Tax=Rhizobium leguminosarum RepID=B6A599_RHILW Length = 839 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 29/276 (10%) Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV--LDSGGFAVVFDMGDGYKSLCENMGG 528 FF + V G +G+GKT ++ LI + +VFD G + GG Sbjct: 461 FFNFHQGDVGHTTVFGPTGSGKTVIMAFLILQAYRVSPRLKTIVFDKDRGLDIMVRAAGG 520 Query: 529 VYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPNG---NLDEVHEGLLLQAVRA 582 Y+ GE +NP + D +++ + LS M P+ NL E ++ A++ Sbjct: 521 TYMALEPGEPSGWNPLL-LDDTEENRVFLYGLLSFMLKPSKEGENLTPQEEAIIRNAIK- 578 Query: 583 SWLAKENRA--RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 S L ++R+ R+ + L + +E +I LD++ +G Y F+ Sbjct: 579 SVLKTKDRSYRRLSSLRALLAGSERTE------------GSLIARLDKWVGHGPYAWLFD 626 Query: 641 SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 + + +L M+ ++ + D P++ A + + ++ +Y + +N++DE W+ Sbjct: 627 NADDNLDISRPMIGFDMTSILDDPTVRTAALLYMFHRLDA-IYDGKAPI--INLMDEAWK 683 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 LLD K ++ ++T R+ G I TQ+ D Sbjct: 684 LLDDDEFK--RTMKDYFKTIRKRNGLVIFGTQSADD 717 >UniRef50_C3WQT8 Conjugal transfer protein trbe n=2 Tax=Fusobacterium RepID=C3WQT8_9FUSO Length = 823 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 103/443 (23%), Positives = 174/443 (39%), Gaps = 93/443 (20%) Query: 350 ELRQRLGSGQSSVVSYF-LNITAFCKDNNETALEVEQDILNSF-RKNGFELISPRFNHMR 407 E++ L Q+ ++S TA ++ N+ LE + DI+ S ++ GF + N ++ Sbjct: 331 EMKDILSMLQNDLISLGKFTFTAIVRNKNKEQLEKDLDIVMSIVQQRGFTAVKENVNTLQ 390 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL-MPLVADNPLTPAGLLAPTYRNQLA 466 F +P G F+ NV + +P + L P + R Sbjct: 391 AFFGSIP-----GDFRH-------------NVRKVPLPSMTAIDLFPINSMWCGERENKH 432 Query: 467 F-IDIFFRGMNNTNYN-------------MAVCGTSGAGKTGL---IQPLIRSVLDSGGF 509 F F + T YN MA+ G +GAGK+ L I + DS F Sbjct: 433 FNAPALFYANSGTGYNSVYFNTHVRDVGHMAMYGRTGAGKSTLLCFIAASFKKYADSQVF 492 Query: 510 AVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFANITDIDQSAER---------VRDQL 558 +FD G + L GG + D + L F P A I D ER + +Q Sbjct: 493 --IFDKGGSTRVLTAATGGKFYDLGRDNLSFQPLAKI---DDRLERNWAYEWLCEIYEQE 547 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 +V+ +P E+ + + +A+ + EN+ I L+N T+RS Sbjct: 548 NVILTP-----ELKDAIS-EALNSLIDVPENQRTITKFQILLQNN----------TLRS- 590 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG-LEDR---PSLLVAVMFSL 674 + YT +G +G YF+ + + V E+G LE + P LL + L Sbjct: 591 ------AIRPYTTDGPFGNYFDGTKDFFNSEYSWQVFEMGKVLESKVVAPPLLKYIFHKL 644 Query: 675 --IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 I+ E + P + ++DE W++L+ N V +F + +T R+ + I TQ Sbjct: 645 ETIMLTEGK----PTQI----ILDECWKVLEDPNF-VKKF-KDWLKTMRKLNVSVIFATQ 694 Query: 733 NIVDFDSDKASSAARAAWGNSSY 755 I D + +++ + Y Sbjct: 695 EITDILESSIKNTLKSSVATTIY 717 >UniRef50_C3KSP5 AAA ATPase n=2 Tax=Clostridium botulinum RepID=C3KSP5_CLOB6 Length = 620 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 85/377 (22%), Positives = 155/377 (41%), Gaps = 52/377 (13%) Query: 436 SFNVANLMPLVADNPLTPAGLLAPTYRNQLA----FIDIFFRGMNNTNYNMAVCGTSGAG 491 S+ V+ L P+ + P G A RN + FI+ F N N+ V G G+G Sbjct: 213 SYGVSALFPISNPDLTHPNG--AYVGRNLFSGSPVFINQFIGPPLLNNPNIGVFGIPGSG 270 Query: 492 KTGLIQPLIRSVLDSGGFAVVFD-MGDGYKSLCENMGGVYLD---GETLRFNPFANITDI 547 K+ I+ I G V D G+ KS+ + M GVY+ GE N F D Sbjct: 271 KSVFIKSFINKHSSLGTKVAVLDPEGEYRKSIVDLMDGVYITITAGEISGINLFDISPDF 330 Query: 548 DQ-----------SAERVRDQL-SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD 595 ++ ++D L S+M S +G GL L AV + + I+ Sbjct: 331 NEKTGVEFVPIMDKVSDIKDLLSSIMRSTSG---RPLNGLELVAVETAVIETYANFGINK 387 Query: 596 VVDFLKNASDSE----QYA------ESPTI---------RSRLDEMIVLLDQYTANGTYG 636 ++ L ++ YA + PT+ + E+ +L Y + G Sbjct: 388 DINSLYQRGGTKLPDGSYAVGRVKKKMPTLSHFHKNLSKKPNAKELSNILIPYLRGNSMG 447 Query: 637 QYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 + E +L DD K++ +L + D + + F L+ ++ + +++KK+ +D Sbjct: 448 MF--DCESTLPDDVKIIGFDLSHITDEFTKFYST-FVLLSWLWQKFVMQNKSVKKIIAVD 504 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E W + + + F+E R R+H + + +Q I +F ++++ A + S Sbjct: 505 ETWMFVKYP--ESAHFLEVLARRGRKHKCSLLFASQYIDEFLNNESGLAVIKSCATS--- 559 Query: 757 IILKQSAKEFAKYNQLY 773 ++L+Q+ + + Q Y Sbjct: 560 VLLRQNPQPAEQIVQYY 576 >UniRef50_C3WQ25 Conjugal transfer protein trbe n=3 Tax=Fusobacterium RepID=C3WQ25_9FUSO Length = 824 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 40/288 (13%) Query: 483 AVCGTSGAGKT---GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLR 537 + G +GAGK+ GLI + +S F +FD G + L +G + D + L Sbjct: 442 CIIGPTGAGKSTALGLINAQYKKYPNSQVF--IFDKGGSARILTYAIGETFFDLGVDNLT 499 Query: 538 FNPFANITDIDQSAERVRDQLSVMASPNGNL-DEVHEGLLLQAVRA----------SWL- 585 F P I + + + ++ + NG + E+ + +L + W+ Sbjct: 500 FQPLRGIGILKNNLDEDEKKIRSLKEKNGEVFSELDKQKILNKEKERAYRELEWANEWVL 559 Query: 586 ---AKEN-------RARIDDVVDFLKNASDSEQYAESPTIRSRLD--EMIVLLDQYTANG 633 A+EN + +I ++ L A+ E++ +R+ L+ E+ L++YT G Sbjct: 560 EIFAQENIELNQVQKTKIWQALELL--ATSEEKFRTISNLRTSLNDRELKDTLEKYTIKG 617 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 G++F+SDE + + V E+ + + S + ++ L +E ++ P + Sbjct: 618 ALGRFFDSDEENF-SFSDWQVFEMEKIMNVKSAVTPLLSYLFHKVEEKLTGAP----SII 672 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDK 741 V+DE W L F N + I + + R+ I TQ + D + K Sbjct: 673 VLDECW--LFFDNEQFANKIREWLKVLRKKNTGVIFATQELGDIMNSK 718 >UniRef50_D2EEW4 Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEW4_9EURY Length = 628 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%) Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG 533 + + N N+ + G++G GKT LI +++ ++G ++FDM Y++L VY+D Sbjct: 92 SLEDLNRNILIVGSTGHGKTSLIYSILKKASENGINYLIFDMKKDYRALGLGKDSVYIDA 151 Query: 534 ETLRFNP 540 LR NP Sbjct: 152 NDLRINP 158 >UniRef50_C7X382 Trse protein n=4 Tax=Enterococcus faecalis RepID=C7X382_ENTFA Length = 851 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 21/189 (11%) Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNF-LTCLPFMAGKGLFKQL-KEAGVVQRAES--F 437 E EQ+++ RK+ F+ R F T + F G L K+ KE A S F Sbjct: 366 EREQEVMRKLRKHQFQAACFLDEQERQFKATFVSFKEGAKLIKRKGKEIKGTALAGSYAF 425 Query: 438 NVANLMPLVA---DNPLTPAGL--LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 N AN + A PL +G+ L+ T+++ L +Y+ + G+ G GK Sbjct: 426 NYANHIDHDAPYSGYPLYGSGVVCLSTTHKDSL-----------RKSYSSIILGSQGFGK 474 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANI-TDIDQSA 551 T + ++ ++ F + D K L E +GG + DG +R NP +D+D Sbjct: 475 TTAAKKQLKQAVEYNNIHYGFYVSDETKRLTEALGGEFYDGREVRLNPCQIYRSDVDART 534 Query: 552 ERVRDQLSV 560 +R +++ S+ Sbjct: 535 KRTKEEQSL 543 >UniRef50_B5Z5T7 Putative uncharacterized protein n=1 Tax=Bacillus cereus H3081.97 RepID=B5Z5T7_BACCE Length = 819 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 60/416 (14%) Query: 366 FLNITAFCKDNNETALEVE-QDILNSFRKNGFELISPRFNHMRNFLTCLPF-MAGKGLFK 423 + N+ D ++ LE + ++I ++ FE+ P+ + + F + +P A ++ Sbjct: 333 YCNLMLVIFDKSKEGLERKVKEIEQFYKGTDFEIARPKVDQLALFNSVIPSSFAEVNYYE 392 Query: 424 QLKEAGVVQRAESFNVANLMP----LVADNPLTPAGLL----APTYRNQLAFIDIF---- 471 Q+ + ++ A SF+++N + + +T LL A RN + + Sbjct: 393 QVVDTSLLATA-SFDISNKIGNRFGMYLGKVVTNYELLDVTQAKNIRNNIVIFNPLITKR 451 Query: 472 -FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 RG +TN N+ V G G+GK+ L++ L G + D + YK E Y Sbjct: 452 ALRGTVHTNGNILVTGPPGSGKSMLVKSLFTWSTFFGAKILYVDPKNEYKKFFEAAVEKY 511 Query: 531 LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 E N ++ E V G D + +AV + + E Sbjct: 512 PTKEFKSMYQKMNFVELSSGGENV-----------GAFDPLIFLKGDEAVETASIILETL 560 Query: 591 ARID-----DVVDFLKNASDSEQYAESPT------IRSRLDEMIVLLDQYTANGTYGQYF 639 ++D D VD ++ + + + I+ + +++ L++Y N YG+ Sbjct: 561 GKVDSRNRKDSVDIFESIQEVMKLPKPNLSKVLNRIKEKNEQLGKFLEKY--NIGYGRML 618 Query: 640 NSDEPS--LRDDAKMVVLELGGLEDRPS------------LLVAVMFSLIIYIENRMYRT 685 DE S L D ++ +L L GL+ S + V++M SL Y+ ++ T Sbjct: 619 FGDEDSQTLNFDKQVNILGLQGLQLPQSEKKLEEMNQAEIIGVSIMVSLSKYV--NIFST 676 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGE-FIEKGYRTARRHTGAYITITQNIVDFDSD 740 ++ + + + DE W L K K GE IE RT R + ITQ DF+++ Sbjct: 677 KKDEEAMIIFDEAWVL---KKSKNGEALIESMLRTGRSLETDIVIITQAFDDFNAN 729 >UniRef50_D1JWZ2 Putative uncharacterized protein (Fragment) n=2 Tax=Bacteroides RepID=D1JWZ2_9BACE Length = 627 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 39/314 (12%) Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG---ET 535 N N V G SG+GK+ + I + G ++ D+G Y+S+ G Y D + Sbjct: 229 NKNRIVIGPSGSGKSFWLNNYILQSYELGRDVMIIDIGGSYRSMIALNRGKYFDSTEQKK 288 Query: 536 LRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL-LLQAVRASWLAKEN---RA 591 FNPF + D D++ + + + S + + + + + VR L EN R Sbjct: 289 FAFNPF--LCDRDKNGKYLYIDTTDAESADDQIKTIVAIISYIWKVREPMLPAENAILRK 346 Query: 592 RIDDVVDFLKNASDSEQYAES-PTI---RSRLDEMI------------------VLLDQY 629 + D++ N+S E++ PT+ R+ L E+ +LL+ Y Sbjct: 347 SVIGFYDYVNNSSIGEKHERIFPTLITYRAYLKEVFSKRMTEFEKQKFEIEELLLLLEPY 406 Query: 630 TANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNL 689 T +G N+ E +++ ++ + + + +L + ++ R + Sbjct: 407 T-DGELSFLLNATENVDIVHDRLIAFDMEDASKKEYFPLVAIITLQMIVDKIKKR--QGF 463 Query: 690 KKLNVIDEGWRLLDF-KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 K +IDE LDF ++ K G+FI YRT R+ G+ QNI+ F + SS + Sbjct: 464 AKELIIDEA---LDFLQDEKFGDFIAYLYRTFRKKEGSITLAAQNIL-FLKNMPSSIKDS 519 Query: 749 AWGNSSYKIILKQS 762 N + KIIL S Sbjct: 520 IIINCATKIILDHS 533 >UniRef50_C3RFU1 Predicted protein n=9 Tax=Bacteroidales RepID=C3RFU1_9BACE Length = 868 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 39/314 (12%) Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG---ET 535 N N V G SG+GK+ + I + G ++ D+G Y+S+ G Y D + Sbjct: 470 NKNRIVIGPSGSGKSFWLNNYILQSYELGRDVMIIDIGGSYRSMIALNRGKYFDSTEQKK 529 Query: 536 LRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL-LLQAVRASWLAKEN---RA 591 FNPF + D D++ + + + S + + + + + VR L EN R Sbjct: 530 FAFNPF--LCDRDKNGKYLYIDTTDAESADDQIKTIVAIISYIWKVREPMLPAENAILRK 587 Query: 592 RIDDVVDFLKNASDSEQYAES-PTI---RSRLDEMI------------------VLLDQY 629 + D++ N+S E++ PT+ R+ L E+ +LL+ Y Sbjct: 588 SVIGFYDYVNNSSIGEKHERIFPTLITYRAYLKEVFSKRMTEFEKQKFEIEELLLLLEPY 647 Query: 630 TANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNL 689 T +G N+ E +++ ++ + + + +L + ++ R + Sbjct: 648 T-DGELSFLLNATENVDIVHDRLIAFDMEDASKKEYFPLVAIITLQMIVDKIKKR--QGF 704 Query: 690 KKLNVIDEGWRLLDF-KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 K +IDE LDF ++ K G+FI YRT R+ G+ QNI+ F + SS + Sbjct: 705 AKELIIDEA---LDFLQDEKFGDFIAYLYRTFRKKEGSITLAAQNIL-FLKNMPSSIKDS 760 Query: 749 AWGNSSYKIILKQS 762 N + KIIL S Sbjct: 761 IIINCATKIILDHS 774 >UniRef50_Q0ZNV8 Putative TrbE protein n=1 Tax=Sulfolobus islandicus RepID=Q0ZNV8_SULIS Length = 668 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 10/107 (9%) Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 ++Y P+++KK+ VIDE R+L ++ + + +R R + I ++Q I DF + Sbjct: 526 KIYSLPKSIKKIVVIDEAHRIL--ARRELAYIMSRFFRETRNLNTSVIAMSQLITDFTT- 582 Query: 741 KASSAARAAWGNSSYKIILKQS-----AKEFAKYNQLYPDQFLPLQR 782 S A+A + N++ +IILKQ KE A++ L ++ +QR Sbjct: 583 --SEEAKAVYENAATRIILKQKDGKLVEKELAEFAGLSENEIEFVQR 627 >UniRef50_A0RVD5 ATPase/type IV secretory pathway component n=1 Tax=Cenarchaeum symbiosum RepID=A0RVD5_CENSY Length = 634 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 64/319 (20%) Query: 463 NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI----RSVLDSGGF-----AVVF 513 N+L + + + +NYNM + G+SGAGK+ + I R + + G A + Sbjct: 296 NELTGTPVIYDYLRRSNYNMTILGSSGAGKSVAAKTYIDNFRRMLSEKYGASQPYKAYIL 355 Query: 514 DMGDGYKSLCE----NMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLD 569 D+ Y L E N+ + +D L +PF + DQ+ D L+ ++ NL Sbjct: 356 DLHGEYAQLAEYLEMNVLNI-MDRTELGLDPFHLLDTGDQAV----DMLATVSEMPANLR 410 Query: 570 EVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQY 629 L RA + + D+V L+N D +AE L ++ Sbjct: 411 S------LAISRA-----QGAGSVADLVQILQN--DKTGHAED------CRRAATYLLEF 451 Query: 630 TANGTYGQYFNSDEP-------SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY-IENR 681 A G F D P +LR+ K S + A++ SLI+ I N Sbjct: 452 -AEGELAGMFRGDLPLHGRTVVTLRNADK-------------SKINAMLISLILQRIWND 497 Query: 682 MYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDK 741 + RT R++ KL VI+E W +L + I+ R+ R+ + +TQ D D Sbjct: 498 IRRTERHVPKLLVIEEAWFVLSMPS--TARIIDDIARSGRKENLHCLVMTQ---DIDEMI 552 Query: 742 ASSAARAAWGNSSYKIILK 760 S A A NS+ ++L+ Sbjct: 553 TSPAGAAVIKNSATMMMLR 571 >UniRef50_O87213 TrsE protein (TraE) n=11 Tax=Lactobacillales RepID=O87213_9LACT Length = 672 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 133/335 (39%), Gaps = 57/335 (17%) Query: 463 NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTG-LIQPLIRSVLDSGGFAVVFDMGDGYKS 521 N + ID+ R N NM V GTSG GKT +IQ ++R + ++ D + Y Sbjct: 255 NSIIAIDMLDRN-TTLNQNMVVIGTSGVGKTTYMIQKILRYAIQDYQIYII-DPENEYTR 312 Query: 522 LCENMGGVYL---DGETLRFNPFA-----------NITDIDQ----SAERVRDQLSVMAS 563 + E++GG L + NP +T++D+ +R++ V+ Sbjct: 313 IVESLGGSVLHLTSNAKYKINPLQIFSEEILSADEAVTNLDELVKDKIQRLKGFFEVLKD 372 Query: 564 PNGNLDE-VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEM 622 +++ V + ++ A S + K NR N +EQ+ PT+ + DE+ Sbjct: 373 DMTQVEKAVMDNIVKNAYINSGILKYNRL----------NEIKNEQW---PTLSNVYDEL 419 Query: 623 I-----------VLLDQYTANGTYGQYFNS---DEPSLRDDAKMVVLELGGLEDRPSLLV 668 + D Y G+Y N+ ++ D K+V +L L+ + Sbjct: 420 TKLSEKDPEKFKTIKDFYFILGSYTHGSNTLFDGATNINLDTKIVSFDLKPLQSEQEVQA 479 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK-VGEFIEKGYRTARRHTGAY 727 + Y+ + + + + KKL +DE + L HK F + Y+ R++ Sbjct: 480 GAYLNTFQYLWDEITKDRKKRKKL-FVDE-FHFLTL--HKSASTFFHQAYKRFRKYNAGA 535 Query: 728 ITITQNIVDF---DSDKASSAARAAWGNSSYKIIL 759 I TQ I D +D + A GNS K+ Sbjct: 536 IAGTQQIQDVIEGQTDSGQNIGEAIIGNSFTKVFF 570 >UniRef50_A6G8L2 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8L2_9DELT Length = 1511 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 35/244 (14%) Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYK--SLCENMG-GVY-LDGE 534 N+ + V G SGAGKT +++ +I +V +G FD + Y E +G VY +D + Sbjct: 1177 NFGLLVTGDSGAGKTQILRAIIHAVTQAGVPVCAFDYKNDYADPEFSELVGLDVYNVDRQ 1236 Query: 535 TLRFNPFANITDIDQSAERVR--DQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRAR 592 L FNP D A+ +R +++ + +L + E L +A++ ++ A+ +AR Sbjct: 1237 GLPFNPLELAGDETGRAQPIRHIHEIAQILKRVFSLGDQMEARLRKAMQRAYEARGIKAR 1296 Query: 593 I-------------DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 + D+V++ L++ +E+ S L ++ + A T+ + Sbjct: 1297 VWIDVDDAPAPPSFDEVIEQLESTGKNEKLLNR---LSPLFDLGLFPSSEDAESTFDELL 1353 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR--TPRNLKKLNVIDE 697 + V L+L GL ++ A+ +I+ + R PR L++L V DE Sbjct: 1354 E----------RSVALQLNGLP-HDNIKQALSEFIIVRLHAHALRGEQPRRLRRLLVFDE 1402 Query: 698 GWRL 701 WR+ Sbjct: 1403 AWRV 1406 >UniRef50_C5ETG4 TRSE protein n=21 Tax=cellular organisms RepID=C5ETG4_9FIRM Length = 798 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 88/354 (24%), Positives = 139/354 (39%), Gaps = 56/354 (15%) Query: 438 NVANLMPLVADNPLTPAGLLAPTYR--NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 ++A LMP P GL T R L D TN N V G G+GK+ Sbjct: 399 DIAALMPFNVQEIYEPTGLCYGTNRISKNLCVAD----RKKLTNGNAMVFGVPGSGKSFF 454 Query: 496 IQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPF---ANITDID 548 + + V L +G +V D Y + +N+GGV ++ NP N D+ Sbjct: 455 CKSEMLGVYLQTGDDIIVIDPTLEYFDIAQNLGGVCINLSNYTQNYINPLWLDVNELDLA 514 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD--FLKNASDS 606 S +RD+ M GL QA+ + L +++ ID + +L A Sbjct: 515 DSKGLIRDKGEFML-----------GLCEQAM-SEMLNSRHKSIIDRCIRKLYLDIAMSK 562 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYG---------QYFNSDEPSLRDDAKMVVLEL 657 E+Y P + D ++ ++ + G FN + +L D + +V Sbjct: 563 EKYV--PVMSDFYDLLMKQPEEEARDIALGLELFVSGSLNIFNH-QTNLDVDNRFIVY-- 617 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV----IDEGWRLLDFKNHK----- 708 G+ D L A+ ++++ +EN R RN +K IDE LL H Sbjct: 618 -GIRDLGKELSAI--AMLVMLENVRARIARNAEKGRATWLYIDECHVLLGTGEHSGRSEY 674 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 G+F+ ++ R+ G ITQNI D + A NS + +LKQ+ Sbjct: 675 SGKFLYSLWKKVRKQGGLCTAITQNISDM---LQNYTAVTMLANSEFIALLKQA 725 >UniRef50_C5TJS3 VirB4 protein n=2 Tax=Proteobacteria RepID=C5TJS3_NEIFL Length = 838 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 35/266 (13%) Query: 481 NMAVCGTSGAGKTGLIQPLIRSV--LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGET 535 N V G SG GKT LI L+ V D FD G + GG Y+ G+ Sbjct: 462 NTMVIGKSGTGKTALINFLLSQVQKYDPKPTIFFFDKDRGAEIFVRACGGAYMALESGQP 521 Query: 536 LRFNPFANITDIDQSAERVRDQLSVMASPNG--NLDEVHEGLLLQAVRASWLAKENRARI 593 FNPF + + V+ +M G + + +L+AVRA I Sbjct: 522 TGFNPF----QCENTEANVQFLCGLMKQLGGKAHYSAAEDDDILRAVRAMLDTPPALRSI 577 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD---A 650 + L N D YA + ++T + G F D P + D A Sbjct: 578 SNFQKSLPNTGDDSLYAN--------------IRKWTRGNSLGWVF--DNPQDKIDFSGA 621 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVG 710 ++ + + + P V +I Y+ +RM + + ++DE W++LD + + Sbjct: 622 NIIGFDYTDVIENPQ----VRDPVIGYLIHRMEELIDGRRFIYIMDEFWKILDGEG-GLK 676 Query: 711 EFIEKGYRTARRHTGAYITITQNIVD 736 EF + +T R+ G I TQ+ D Sbjct: 677 EFAKNKQKTIRKQNGMGIFATQSPED 702 >UniRef50_Q8GCN3 TraE/TrsE family NTPase n=6 Tax=Mycoplasma RepID=Q8GCN3_MYCFE Length = 937 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 97/468 (20%), Positives = 177/468 (37%), Gaps = 74/468 (15%) Query: 378 ETALEVEQD---ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 E A E++Q+ I N F ++ F + F FL + K L ++ + + A Sbjct: 428 ENAEELKQNNLKIKNGFTRSNFGINDLTFRQFEGFLDMSNYPLSK-LDREYYQITSINNA 486 Query: 435 ESFNVANLMPLVADNPL----TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 + + NL PL N L G +P N + + N+N+ + GTSG Sbjct: 487 IGYPLKNL-PLNDGNNLLLGNEVGGNDSPIVWNMFSLTS------SRANHNVMILGTSGM 539 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDI 547 GK+ L + ++ S L +G A++ D Y MGG +D G+ NP + I Sbjct: 540 GKSTLTKKILTSSLAAGNIAIIIDPQAEYVKWANKMGGQIVDLGSGDGTVINPLQVKSFI 599 Query: 548 DQSAERVRDQLSVMASPN------------GNLDEVHEGLL-LQAVR--ASW-------- 584 + + + + + + +++E+ + +L L+ ++ SW Sbjct: 600 AREEDDANVNFNTLINNHLLWLEKFFSFIFDDMNEMKKNILQLEIIKLYQSWGIYRLKEV 659 Query: 585 --LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD-QYTANGTYGQYFNS 641 L + +DD++ +K + + + ++ +M LL+ ++ GT G +N Sbjct: 660 KELKNDGWPTMDDLIKQMKKFVAPKDHHDKEGYTKKVLDMAELLEGKFGRYGTLGALYNG 719 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLL-----VAVMFSLII----------------YIEN 680 ++ + +VV + L D + + V+ SL+ Y E Sbjct: 720 -HTNINIENDLVVFKTSNLIDTEGSVNARIGIMVLISLVNGFIFDNAFNNKKRINEYKEK 778 Query: 681 RMYR--TPRNLKKLN-----VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 R + + ++KL IDE + KN +I + R+ I TQN Sbjct: 779 NKIRLISKKEIQKLTRYCSFCIDEEHLYISEKNITTLNYISDTTKLVRKLDCGTIHTTQN 838 Query: 734 IVDFDSDKA-SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 D+ S A A+ GN Y L + +LY PL Sbjct: 839 PSDYASSTAVEQIAKKITGNCQYSFFLGLVGDDIEAVKKLYKTAEAPL 886 >UniRef50_C5VLL8 Conjugative transposon protein TraG n=21 Tax=Bacteroidales RepID=C5VLL8_9BACT Length = 961 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 15/159 (9%) Query: 619 LDEMIVLLDQYTANGTYGQYFNSD-EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 +D +L+Q+ G N+D E SL D+ + +V E+ ++D P L V+ ++ Sbjct: 699 IDNFAAILEQFYRGGELESTLNNDLEQSLFDE-RFIVFEIDKIKDDPVLFPIVVLIIMDV 757 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD- 736 +M R + K L +I+E W+ + + + E+I+ Y+T R+ G +TQ + D Sbjct: 758 FLQKM-RIKKGRKAL-IIEEAWKAI--ASPTMAEYIKYLYKTVRKFHGIAGVVTQELNDV 813 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 DS A NS KI+L Q AK+ Y D Sbjct: 814 IDS---PIVKEAIINNSDVKILLDQ-----AKFKDRYDD 844 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGET 535 N N G SG+GK+ + ++R +L+ V+ D GD Y+ +C GG Y+ Sbjct: 419 NANFFCIGPSGSGKSFHMNSVVRQLLEQNTDVVMVDTGDSYEGICSYFGGTYITYSKEHP 478 Query: 536 LRFNPF 541 + NPF Sbjct: 479 ISMNPF 484 >UniRef50_B1ZPG6 Putative uncharacterized protein n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZPG6_OPITP Length = 898 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 7/142 (4%) Query: 622 MIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL-EDRPSLLVAVMFSLIIYIEN 680 + LL+ ++ANG YG+ F+ ++ K+ ELG + E L A F + Y + Sbjct: 669 LATLLEPWSANGAYGELFDGVS-NVNLTGKIAHFELGYIPESAEELKAAAAFLIANYTRS 727 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 M R PR L+K NV +E R K + + + Y+ R++ + QN F Sbjct: 728 HMMRLPRALRKANVFEEVARFALIPTGK--KVLRESYQQLRKYNVWNLASVQNYEQF--- 782 Query: 741 KASSAARAAWGNSSYKIILKQS 762 + S GNS +L+QS Sbjct: 783 RNSDIRGPVLGNSRILFLLRQS 804 >UniRef50_B7U591 Putative uncharacterized protein n=5 Tax=Bacillales RepID=B7U591_BACSU Length = 655 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 90/409 (22%), Positives = 164/409 (40%), Gaps = 77/409 (18%) Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMN 476 AGK L A + + FN + L D+P L T + D+F Sbjct: 204 AGKAL-----PAATLAASLPFNFSKL-----DDP--NGSYLGTTTTGGIVLFDLFHLSKT 251 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY--LDG- 533 YN + GT GAGK+ ++ + + G + FD+ +K L + GG Y LDG Sbjct: 252 RNYYNGVIVGTMGAGKSTALKKIGLDNILRGNYIRGFDVTGEFKPLIDLFGGRYISLDGS 311 Query: 534 -------ETLRFNPFANITDIDQSAERVRDQLSVMAS------PNGNLDEVHE-GLLLQA 579 + L+ + ++T ++ + LS M P+ ++ E +L+ Sbjct: 312 SGIINALQVLKTSADPDLTFLENEQQSFMKHLSKMNDFYKFIVPSATDQDLQEFSRMLKK 371 Query: 580 VRASW------------LAKENRARIDDVVDFLKNA--SDSEQ--YAE--SPTIRSRLDE 621 + + L+ + D ++F++ D E+ + E SPT RL++ Sbjct: 372 LYNKFGLTPDMKEGITQLSNDRYPIFSDFLEFVREELYEDFEKKLFREEISPTRTKRLED 431 Query: 622 MIVLLDQYTANGTYGQYFNSDEPSLRD--DAKMVVLELGGLED-RPSLLVAVMFSLIIYI 678 + + L+ + YG+ FN S+ D + ++V + L + A MF+ + I Sbjct: 432 IELTLESIVED--YGRLFNG-HSSIDDITNEQIVFFSIRSLVGMTKKVFNAQMFNALTLI 488 Query: 679 ENRMYRTPR----------------NLKKLN----VIDEGWRLLDFKNHKVGEFIEKGYR 718 + M + + +KK+ +IDE RL++ N +F R Sbjct: 489 WDNMIQVGKPQYDGLYEDNGLTMEEKMKKIKRMLVIIDESHRLINANNELAVDFTTDFAR 548 Query: 719 TARRHTGAYITITQNIVDF--DSDKASSAA--RAAWGNSSYKIILKQSA 763 AR++ G + +Q+I DF + KA + + + YK I+KQ + Sbjct: 549 EARKYFGGLLFASQSIRDFVPEGSKADVVGKIKTLFELTQYKFIMKQDS 597 >UniRef50_D1AV72 CagE TrbE VirB component of type IV transporter system n=2 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV72_STRM9 Length = 850 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 71/374 (18%), Positives = 155/374 (41%), Gaps = 61/374 (16%) Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKE---------AGVVQRA--ESFNVANLMP 444 E++ + N +R L F+AG + L V++A ++ ++ L+P Sbjct: 358 LEILDKKINEVRRILNFYDFVAGVDKYNTLDSIFGSLPGNIVNNVRKAPMNTYLLSALLP 417 Query: 445 LVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 + + +N L L +L ++++ + + ++ + G +GAGK+ L+ Sbjct: 418 MSSLYTGNKINNHLKDVALFTTKTEKELFYLNLHNKDIGHS----LIIGPTGAGKSFLLS 473 Query: 498 PLIRS-------VLDSGGFAVV-------FDMGDGYKSLCENMGGVYLD--GETLRFNPF 541 + + VLD G + + FD + L GG + D + + F P Sbjct: 474 MIAANFLKYEGKVLDEYGSSKIKPAQVFFFDKDASSRVLTYTSGGKFYDLGKKEIAFQPL 533 Query: 542 ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 NI + + ++++ + D ++ +A+ + +AK + ++ ++ Sbjct: 534 KNIHIKSEREWALGWIINILEQERVSYDATTRNIVEKALDSLSIAKVESRTLSNLRTYIA 593 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 ++S TI S +LD Y N YG+YF++ + + E+G + Sbjct: 594 SSS--------KTIAS-------VLDSYCGNNVYGEYFDN-NFDNISNNNFITFEMGDVI 637 Query: 662 DRPSLLVAVMFSLIIYIEN-RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 +P ++ ++ + IE ++ TP + ++DE W L KN K+ + I + + Sbjct: 638 SKPKVISPLLDYIFHKIETEKLDGTPTVI----LLDECWIFL--KNEKMRDKINEWLKVL 691 Query: 721 RRHTGAYITITQNI 734 R+ + I TQ++ Sbjct: 692 RKKNTSVIFATQSL 705 >UniRef50_A8F0L1 VirB4 n=48 Tax=Rickettsiales RepID=A8F0L1_RICM5 Length = 814 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 70/313 (22%), Positives = 133/313 (42%), Gaps = 46/313 (14%) Query: 484 VCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNP 540 + G +GAGKT L+ L FD G + + GVY G FNP Sbjct: 465 IIGPTGAGKTVLMNFLCAEAQKFKPRMFFFDKDRGAEIFIRALNGVYTVIDPGLKCNFNP 524 Query: 541 FANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVDF 599 + D ++ + + V+ + NG +L +L QAV ++ ++ R+ +V+ F Sbjct: 525 L-QLEDTSENRTFILEWFRVLVTSNGESLTAQDNKILSQAVSGNFRLEKKDRRLSNVIAF 583 Query: 600 LKNASDSEQYAESP-TIRSRLDEMIVLLDQYTANGTYGQYFNS--DEPSLRDDAKMVVLE 656 L ++P ++ SR+ + G++ + F++ D+ L+ A++ + Sbjct: 584 LG--------IDTPNSLASRIA-------MWVGKGSHAKIFDNEIDDIDLQK-ARVFGFD 627 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + L P L V+ +YI +R+ + K + V+DE W L+D N I+ Sbjct: 628 MTELLKDPVSLAPVL----LYIFHRINISLDGQKTMIVLDEAWALID--NPVFAPKIKDW 681 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF----AKYNQL 772 + R+ I TQ++ D AA++ ++ +++Q+A + K + Sbjct: 682 LKVLRKLNTFVIFATQSVED--------AAKSRISDT----LIQQTATQIFLPNLKATDI 729 Query: 773 YPDQFLPLQRDMI 785 Y F+ QR+ I Sbjct: 730 YRSAFMLSQREYI 742 >UniRef50_B5EKP3 CagE TrbE VirB component of type IV transporter system n=3 Tax=Acidithiobacillus RepID=B5EKP3_ACIF5 Length = 840 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 72/306 (23%), Positives = 122/306 (39%), Gaps = 40/306 (13%) Query: 484 VCGTSGAGKTGLIQPLI---RSVLDSGGFAVVFDMGDGYKSLCENMGGVY--LDGET--L 536 + G +G GK+ L+ L + DS + FD G +L E MGG + L+G T L Sbjct: 472 IAGMTGGGKSTLLALLAAQWQRYPDSR--VIAFDKGMSLYALTEAMGGQHYDLNGPTSDL 529 Query: 537 RFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDD 595 F P ++ D ++A D + +A+ G + + AV LA+E+ + Sbjct: 530 FFAPLQHVDDPAEAA-FAADWVEALATLQGMTITSTERSAIRDAVHG--LARESGRSLTA 586 Query: 596 VVDFLKN--ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR-DDAKM 652 ++ ++N D+ QY YT G G+ +++ L DA M Sbjct: 587 LLQMIQNRGIKDALQY-------------------YTLTGQTGKLLDAESDGLSMADASM 627 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 + E+ L + V +++Y+ +R+ + L ++DE W LD N Sbjct: 628 ITFEMSHLMNGGPAEHRVTVPVLLYLFHRIEQMLDGRPTLILLDEAWTFLD--NELFLAK 685 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + + + R+ A + TQ++ D K SS + KI L A L Sbjct: 686 LRQWLKELRKKNAAVVFATQSLNDL---KNSSLLPVLKESCPTKIFLPNRAATSPDLKPL 742 Query: 773 YPDQFL 778 Y D L Sbjct: 743 YIDMGL 748 >UniRef50_D1QR49 Plasmid transfer protein n=1 Tax=Prevotella oris F0302 RepID=D1QR49_9BACT Length = 972 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 6/144 (4%) Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 +D +L+Q+ G N+D D K +V E+ ++D P L V+ ++ Sbjct: 712 IDNFAAILEQFYKGGELEHTLNNDLDKSLFDEKFIVFEIDKIKDDPILFPIVVLIIMDVF 771 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 +M R + K L +I+E W+ + + + +I+ Y+T R+ G +TQ + D Sbjct: 772 LQKM-RLKKGRKAL-IIEEAWKAI--SSPTMAGYIKYLYKTVRKFNGIAGVVTQELNDVI 827 Query: 739 SDKASSAARAAWGNSSYKIILKQS 762 + A NS KI+L QS Sbjct: 828 D--SPIVKEAIINNSDVKILLDQS 849 >UniRef50_UPI0001C42939 hypothetical protein BpOF4_20614 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42939 Length = 667 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 86/405 (21%), Positives = 150/405 (37%), Gaps = 81/405 (20%) Query: 365 YFLNITAFCKDN-----NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 Y++++ A N N +EVE+++ ELIS +L+ LP G+ Sbjct: 162 YYVSVQASIFANSYEELNSKCVEVEREV----SAESIELISAHGRQKEGWLSTLPL--GR 215 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN 479 + + + Q+A + + P + G+ N+ + + F +NN Sbjct: 216 NYLAK-SDRNLDQQA----LTAIFPHSSSKLNHTGGIPIGVSGNEYVYYNQFDAKLNN-- 268 Query: 480 YNMAVCGTSGAGKTGLIQPLI-RSVLDSGGFAVVFDMGDGYKSLCENMGGVYL------D 532 YN+ V G SG+GK+ ++ +I R +D V+ D+ Y S+ + +GG + Sbjct: 269 YNLGVFGESGSGKSTFLKQVIGRGFMDGINRTVILDVEPEYVSMAQALGGTVIVIRSDDS 328 Query: 533 GETLRFNPF---------------------ANITD-IDQSAERVRDQLSVMASPNGNLDE 570 ++ R NP N+T+ I + E + A L Sbjct: 329 QQSSRINPLDLYAEKEVKNPGTADEYIVERVNLTEKIKEVIEFFKVMKETTAGYEAKLTP 388 Query: 571 VHEGLLLQAVRASWLAK-----------ENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 V G+L + + K E +IDDV N +Y PTI Sbjct: 389 VELGMLNDILENLYRVKYQITDDPDSLYEQVQKIDDV----GNIQWERRYVPMPTISDVY 444 Query: 620 DEM-----------------IVLLDQYTANGTY-GQYFNSDEPSLR-DDAKMVVLELGGL 660 +E+ + L Q A G + GQ + S+ D + ++V ++ L Sbjct: 445 NELLHLAQSGEDQLVDLINVVKLFTQGKAFGLFDGQTTLAGNASVNLDTSPIIVFDISKL 504 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + + L+ +I NR + KK V DE W L +K Sbjct: 505 SESGAERPLAQHVLMTWIWNRFVKNDPKSKKRIVQDEAWMTLRYK 549 >UniRef50_C0BU73 Putative uncharacterized protein n=2 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU73_9BIFI Length = 511 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 110/475 (23%), Positives = 186/475 (39%), Gaps = 57/475 (12%) Query: 314 KTHSEANLKYMDLEKKSKTS---YAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 + ++E ++ MD +K++ + + ++ G+LR L S +V + I Sbjct: 12 RKNAEVKMQVMDQRRKNRKQGLDPDDLPDDLADQQEQLGQLRDELRSTNQRLVDSIIVIG 71 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG- 429 E LEV + R + + N L FM +GL +L Sbjct: 72 VSAASQEE--LEV------ACRN-----VKAKVNAQSCTAESLKFMQMEGLTAELPLGNN 118 Query: 430 --VVQRAESFN-VANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 ++R + N A L+P P GL + N + I ++ N N V G Sbjct: 119 PLPMKRTLTTNSAAILIPFTTQEVFEPHGLFYGS--NARSGNPILADRRSHMNSNGFVLG 176 Query: 487 TSGAGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFA 542 TSG GK+ ++ I + L+ +V D Y +L GG + G R NP Sbjct: 177 TSGGGKSFTVKQEIAGMFLNRDDEVIVIDPEREYLALAAAFGGQIIQISAGTGTRVNPMD 236 Query: 543 NITDIDQSAERVRDQLSVMASPNG-------NLDEVHEGLLLQAVRASWLAKENRARIDD 595 + + D +++ V+D+ + + S G LD + +GL+ Q V S L R + Sbjct: 237 IVLEDDSASDPVKDKTNNVVSMIGALIGGIDGLDPLQKGLVDQCV--SNLYTRYRNQGGG 294 Query: 596 VVD-FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 VV L++ D Q R D L+ Y G FN + ++ + V Sbjct: 295 VVQPTLQDLHDELQAGGDQVSRYLADA----LNPYITGSMSG--FNG-QTNVDLSNRFTV 347 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV-IDEGWRLLDFKNHKVGEFI 713 ++ GL L M +I + NR+ R N ++ + +DE R F N Sbjct: 348 FDVSGLSG--ELRTFGMMVVIDQVWNRVIRNKANGRRTWLYVDEFHRF--FSNQYAAAQF 403 Query: 714 EKGYRTARRHTGAYITITQN---IVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + Y+ AR++ ITQN I+D AR NS + ++L Q++ + Sbjct: 404 KDIYKRARKYGLGVTGITQNVEEILDLQD------AREMLSNSDFLMLLSQNSTD 452 >UniRef50_B4S9L3 CagE TrbE VirB component of type IV transporter system n=2 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9L3_PROA2 Length = 820 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 81/324 (25%), Positives = 129/324 (39%), Gaps = 55/324 (16%) Query: 436 SFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNT-------NYNMA----- 483 + N+A++MPL A AG A T+ L + + T N N+ Sbjct: 397 TLNLAHMMPLSA----IWAGEQANTHLGALTGCSLPHMMCSTTGSTPFRLNLNVGDVGHT 452 Query: 484 -VCGTSGAGKTGLIQPL-IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLR 537 V G +GAGK+ L+ L ++ + V+FD ++ +GG Y + Sbjct: 453 LVVGPTGAGKSTLLCMLELQWLKYPDSQVVIFDKDRSARAATMAVGGHYYEPGNEHAPFA 512 Query: 538 FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 F P A+I D AERV G +L +R + KE A ++ Sbjct: 513 FQPLAHI---DDQAERV----------------WAAGFVLLLLREQGV-KETPALKKEID 552 Query: 598 DFLKNASDSEQYAESPTIRSRL---DEMIVLLDQYTANGTYGQYFNSD-EPSLRDDAKMV 653 L N + + T+ + L E+ L YT G YGQ F++D E SL+ +M+ Sbjct: 553 SALANLASQTADHRTMTVFTDLVQSREVRDALRPYTIQGNYGQLFDADHEESLKGSWQMI 612 Query: 654 VL-ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 + L G+ L+ ++ L IE R P L V+DE W L K+ Sbjct: 613 EMNSLMGMHSEA--LIPALYYLFHRIEQRFDGRP----TLLVLDEAWLFL--KHDVFMSQ 664 Query: 713 IEKGYRTARRHTGAYITITQNIVD 736 ++ +T R+ + TQ + D Sbjct: 665 MQNWLKTLRKKNVYVVFATQEVAD 688 >UniRef50_D1PSM3 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM3_9FIRM Length = 881 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 94/425 (22%), Positives = 159/425 (37%), Gaps = 88/425 (20%) Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + D LN ++NGF + P + +F+ C + K VA L Sbjct: 436 ITYDQLNYEQRNGFSSVQPLGSD--HFILCSNNLPSK------------------TVAAL 475 Query: 443 MPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 P + + P G+ L T R + DIF R TN + G++G GK+ L + ++ Sbjct: 476 YPFSYSSLIHPHGMPLGRTDRGGPVYADIFQRDDQITNGVFFISGSAGQGKSYLQKKILT 535 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANI---------TDIDQSAE 552 ++ G V D + Y + +GGV +D + N NI D+++ AE Sbjct: 536 FMVTRGVHCYVMDPENEYSDVTRGLGGVVIDCAS--GNHKINIFEVRRIKLEDDVEEGAE 593 Query: 553 R----------------VRDQLSVMAS--PNGNLDEVHEGLLLQAVRASWLAKENRARID 594 ++D+ +M P+ L + +L+Q + AS ID Sbjct: 594 LPEISNESPMFLQHLSWLKDEFRIMMPEMPDSTLRALM--ILVQGMYAS-------VGID 644 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLD----------------EMIVLLDQYTANGTYGQY 638 DF D Q+ + PT + D EMI + Y + TYG+ Sbjct: 645 QHTDF-----DRLQHQDYPTFSTLYDFVQKQLGKNSYPMLTKEMISEVLLYINDPTYGEL 699 Query: 639 FNSDEPSLRDDAK---MVVLELGG-LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV 694 N + D K ++ +G LE L AV +L YI + + R + L Sbjct: 700 SNIFNGTTTIDVKNNPLICFSMGALLEGSEQRLQAVENNLNTYIWSIVLL--REFQVLLS 757 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 DE + L+ + ++I R +R++ TQ + D + + SS Sbjct: 758 FDELYMYLE--QPLMAKYISYFARRSRKYNACIGVATQQLQDCLDESVRRYSSPIINMSS 815 Query: 755 YKIIL 759 +K + Sbjct: 816 FKFLF 820 >UniRef50_C5F2I9 Type IV secretion/conjugal transfer ATPase n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F2I9_9HELI Length = 821 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 93/411 (22%), Positives = 154/411 (37%), Gaps = 66/411 (16%) Query: 350 ELRQRLGSGQSSVVSY---FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 EL L ++ ++ Y NI F +DN E+ +DI GF + N + Sbjct: 323 ELDSALAESKTGLLGYGYYTANIVVFDRDN-ESLEHKLKDIRKVLENLGFLSRTETINSV 381 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV---ADNPLTPAGLLAPTYRN 463 +L LP L + + + N+ +L+PL A P+ P N Sbjct: 382 EAYLGTLPGFVYPNLRRPV--------LNTLNLTHLIPLASIWAGEKYNPSDKFPP---N 430 Query: 464 QLAFIDIFFRGMNNTNYNMAVC--------GTSGAGKTGLIQPLIRSVLDSGGFAV-VFD 514 + + G N+ V G +G+GK+ L+ + S + FD Sbjct: 431 SPPLMQVVTSGNTPFRLNLHVSDLGHTLIFGPTGSGKSTLLANIFLSFQKYKNAKIYAFD 490 Query: 515 MGDGYKSLCENMGGVYL----DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDE 570 G + GG++ D +L F P ANI + A + + N N+ Sbjct: 491 KGQSLLAPTLATGGIHYNIAGDHSSLAFAPLANIKTEAEIAWAEFWIETCLKLQNVNVTP 550 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT 630 H+ L+ +A L + + +F+ D++ +R L YT Sbjct: 551 KHKKLIHEA-----LISHINTKSTSLTEFVSALQDND-------LRDALS-------YYT 591 Query: 631 ANGTYGQYFNSDEP--SLRDDAKMVVLELGGLEDR---PSLLVAVMFSLIIYIENRMYRT 685 +GT G F+S+E SL + + EL L D+ P+LL YI NR+ R Sbjct: 592 ISGTGGFLFDSEEDKLSLSNITTFEIEELMSLGDQYIVPALL---------YIFNRIERG 642 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 L +IDE W + K+ + I + R+ A + TQ++ D Sbjct: 643 LDGSPTLLIIDEAW--IALKHSAFKDKIVNWLKVLRKANVAVVMATQSLSD 691 >UniRef50_C8S1Y9 CagE TrbE VirB component of type IV transporter system n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Y9_9RHOB Length = 780 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 39/280 (13%) Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GE 534 TN + V G SG GKT + L +GG ++FD G K +GG Y + G Sbjct: 435 TNGHTLVLGKSGGGKTTTVAFLAAQAQRAGGRTIIFDKEAGLKMAVRALGGRYAEIRAGR 494 Query: 535 TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID 594 NP A + A + ++++ +G + + L A+ + A+E Sbjct: 495 PTGLNPLATESGERGEAWFLDWLVALLEQRSGPMTPLQSEALKSAISQNGKAREGLRNFR 554 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN-SDEPSL---RDDA 650 + + D A+ + ++ G YG F + EP + D Sbjct: 555 AFQELFGDVGDGLDLAQR-------------ISEWGPEGRYGWVFGEASEPVVDFTSHDV 601 Query: 651 KMV----VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLD--F 704 V +L+LG +R ++L + + + IE + L +IDE W++LD + Sbjct: 602 TAVDLTEILDLG--TERTAILGYLFRRIEMLIEEKR-------PTLILIDEAWKVLDDEY 652 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASS 744 K+ E++ TAR+ + +TQ KA S Sbjct: 653 FAKKLAEWLV----TARKKNVVVVMMTQFPSQIRGSKARS 688 >UniRef50_UPI000185C73B conjugative transposon protein TraG n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C73B Length = 1010 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 109/285 (38%), Gaps = 34/285 (11%) Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 L + +A+L DN+S LN EL + + + QV E LEKK Sbjct: 220 LGGSSTVAYL--AVDNFS-FLN-ELEAYQTIVYNQVIAIPPQVSRQRE-------LEKKM 268 Query: 331 KT--SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 K AK PS A+E EL + +V ++ C D E + + I Sbjct: 269 KKHDGVAKNAPSNAIVAQEIQELLHDIAVNGQIIVDAHFSLVFAC-DTLEKMEKTQSTIE 327 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGK----GLFKQLKEAGVVQR-AESFNVA--- 440 + G + +N M F + + A + LF EAG+ ES+ ++ Sbjct: 328 SKLFTKGIIISKNAYNQMELFRSAIIGNAVELQDYDLFTTTSEAGLCFFFKESYPISEKS 387 Query: 441 NLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI 500 N AD P + D+ ++ N N V G SG+GK+ L+ ++ Sbjct: 388 NFYLRFADRQGVPLKVDTS---------DLPYQTGRINNRNKFVLGPSGSGKSFLMNNIV 438 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFA 542 L V+ D GD Y C GG Y+ + + + NPFA Sbjct: 439 EQYLTYNYDVVIVDTGDSYSGTCSYKGGRYVQYTEEKPITMNPFA 483 >UniRef50_A7VRX8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VRX8_9CLOT Length = 800 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 41/237 (17%) Query: 438 NVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIF-FRGMNNTNYNMAVCGTSGAGKTGLI 496 +VAN+ P P G+ N I F RG + TN ++ + G SG GK+ L+ Sbjct: 387 SVANMFPFSYSGKTDPQGMYIGRDANGSNIIVNFDQRGQDKTNGHIIILGNSGEGKSFLL 446 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF--NPFANITDIDQSAERV 554 + L S + D + YK L E +GG Y+D T ++ NP R+ Sbjct: 447 KILSCIFRQSRKNLYILDPENEYKELTEALGGTYMDMMTGKYIINPL---------EPRL 497 Query: 555 RDQ--LSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES 612 +Q +S + SP+ + A RI+ + FL++ + Y Sbjct: 498 WNQEPVSELESPD-----------------TPKAFFKPLRINQHIAFLRDFFSA--YKPF 538 Query: 613 PTIRSRLDEMIVLLD------QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR 663 PT +LD + ++L+ T Y + +SD P L D K++ EL E++ Sbjct: 539 PT--EQLDTLEIMLELLYKEFHITEETDYSRLRSSDYPILTDLYKLMTRELENYEEK 593 >UniRef50_C8SC72 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SC72_FERPL Length = 604 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 105/473 (22%), Positives = 193/473 (40%), Gaps = 78/473 (16%) Query: 300 PFILTLTLVVE--DQVKTHSEANLKYMDLEKKSKTSYAKW---FPSVEKEAKEWGELRQR 354 P++L VE D+ + +E N + LE K + K S+E E + R+R Sbjct: 89 PYLLDFVQFVEPMDETRIVNELNRRITQLEAKLQEMREKGRTDTTSLEHELEYLYSYRER 148 Query: 355 LGSGQSSV--VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 L S Q+ + +S + I A D+ A + D + G +L R+ + F T Sbjct: 149 LVSRQTKLYTLSTYFYILA---DDKNAAEDYFADFNKRMKAKGCQLKRIRYRMLEAFKTL 205 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL--------APTYRNQ 464 LP GK + V+ +E+ A+ P V + +G+L +P ++ Sbjct: 206 LP--EGKDYLSR----KVLVDSEA--AASCFPFVFPTLMHESGVLYGYDVATKSPIIVDR 257 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAV-VFDMGDGYKSL 522 F +N V G G+GK+ + + R VL+ + + D G+K L Sbjct: 258 FKF----------AGHNEIVVGKIGSGKSFFAKLEVARWVLNDPEVRIFLVDPLAGFKDL 307 Query: 523 CENMGGVYLDGETLRFNPFANITDIDQSAERV-RDQL------------SVMASPNGNLD 569 +G + NP ++ + V +D+L + SP LD Sbjct: 308 AAVLGAQRVVVGKNVMNPLDIFVPEGETPQSVLKDKLMSLLEFFSTFFEEEVGSP---LD 364 Query: 570 EVHEGLLLQAVRASWLAKENR-ARIDDVVDFLKNAS-DSEQYAESPTIRSRLDEMIVLLD 627 + G+L +A+ +++ K+ R IDDV++ + E+ + I+S + L Sbjct: 365 KAESGVLRKAIIKAYVDKKFRDVIIDDVIEKIDQVPVGEEERRAAERIKSAMSAFTAELS 424 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELG---GLEDRPSLLVAVMFSLIIYIENRMYR 684 + NG + ++R+ ++V + G+E P L AV+ +I +R Sbjct: 425 MF--NG-------RTDVNIRN--RVVYFDFSAVEGVEKSPLPLHAVL----TWIGSR--E 467 Query: 685 TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 KK+ V+DE + ++ ++ +F+E+ R +R H Y +TQ +F Sbjct: 468 RAEKGKKMVVVDEAHYFMAYR--QIRKFLEREVRHSRHHKTGYTLVTQGYDEF 518 >UniRef50_C3QQR1 Plasmid transfer protein n=32 Tax=Bacteroidales RepID=C3QQR1_9BACE Length = 905 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGET 535 N N G SG+GK+ + ++R + + G V+ D G+ Y+ LCE +GG Y+ + Sbjct: 439 NSNFFCLGPSGSGKSFHMNSVVRQLHEQGTDVVMVDTGNSYEGLCEYLGGKYISYTEECP 498 Query: 536 LRFNPF 541 + NPF Sbjct: 499 ITMNPF 504 >UniRef50_Q3EN28 TRSE PROTEIN n=9 Tax=Bacillales RepID=Q3EN28_BACTI Length = 645 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%) Query: 453 PAGLLAPTYRNQLAFI-DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV 511 P G T + + I DIF + +YN + G SGAGK+ L++ G F Sbjct: 225 PYGTYYGTTKTKGNVIFDIFHKDNQRKSYNGVMIGKSGAGKSTLLKKKSVDYASKGHFVR 284 Query: 512 VFDMGDGYKSLCENMGG--VYLDGETLRFNPF 541 +FD+ + + + +GG + LDG + NP Sbjct: 285 IFDVVEEFTDTVKELGGKTISLDGSQGQINPL 316 >UniRef50_C8VVQ1 Type IV secretory pathway VirB4 protein-like protein n=10 Tax=Clostridiales RepID=C8VVQ1_DESAS Length = 609 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 438 NVANLMPLVADNPLTPAGLLAPTYRNQLA---FIDIFFRGMNNTNYNMAVCGTSGAGKTG 494 +VANL P P G R++ +D R + TN N+ + G SG GK+ Sbjct: 201 SVANLYPFNYSGKTDPNGFCLG--RDKFGSNILVDFNRRADDKTNANILILGNSGQGKSF 258 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 L++ ++ ++ +SG + D ++ L N+GG ++D Sbjct: 259 LLKIILCNLRESGMRIICLDPEMEFEDLTNNLGGCFID 296 >UniRef50_Q84BZ9 Putative membrane-bound ATPase n=6 Tax=Spiroplasma RepID=Q84BZ9_SPIKU Length = 899 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG 533 TN+NM + G SG GKT L++ +I + G +V D Y+ LC+ G ++D Sbjct: 529 TNHNMFIIGASGMGKTYLLKKIINHHIKMGRKVIVIDPEREYQELCKYYDGNWIDA 584 >UniRef50_D0UIP4 ATPase n=5 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=D0UIP4_AGGAD Length = 927 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 42/309 (13%) Query: 483 AVCGTSGAGKTGLIQPLI-------------RSVLDSGGFAVVFDMGDGYKSLCENMGGV 529 A+ G SG GKT L L+ ++ L+ A+ D G + MGG Sbjct: 552 AILGKSGTGKTVLATFLLSQCTAFSNPDTFPKNSLNKKFTAIYLDKDYGAEIAVRAMGGK 611 Query: 530 Y---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASW- 584 Y +G+ FNPF + + + + + ++++A+ +G+ L + + AVRA Sbjct: 612 YNRLKNGQPTGFNPFM-LEKNEPNITFLNNFIALLATSDGSTLSTKDKEDINFAVRAVMD 670 Query: 585 LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 L KE RA + + L+N + S R R+ + G YG F+++ Sbjct: 671 LDKEYRA--EGISRLLENIQKDVENENSLERRLRI---------WKKGGIYGWVFDNETD 719 Query: 645 SLRDDAKMVVLELGGLE--DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 SL + + + G E D P+++ + F L+ R+ + + + +DE W+ L Sbjct: 720 SLSFN-EYDIYGFDGTEVLDNPAVINPLAFYLLF----RVQQILDGRRVVVFLDEFWKWL 774 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 ++ EF G +T R+ G + ITQ+ D S ARA I L S Sbjct: 775 --QSDSFSEFAYDGLKTMRKKNGFIVPITQSP---DEIIKSKIARAIIEQVETFIFLPNS 829 Query: 763 AKEFAKYNQ 771 ++ +Y Sbjct: 830 KADYHEYTH 838 >UniRef50_Q1M9N8 Putative crown gall-like type IV secretion system protein n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9N8_RHIL3 Length = 793 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 78/341 (22%), Positives = 132/341 (38%), Gaps = 36/341 (10%) Query: 450 PLTPAGLLAPTYRNQLAFIDIFFRGM--NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG 507 P A + PT R + + G T + V G +G+GKT LI G Sbjct: 417 PWGDAVTIFPTARGETFRFNFHLPGKPGQRTVGHTLVLGQTGSGKTLGTAFLISQAQRLG 476 Query: 508 GFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMA-S 563 ++FD +G++ MGG Y G+ FNP D + A + D L+ +A + Sbjct: 477 ARTILFDKDNGFEMAVRAMGGCYSAVRMGDETGFNPMRAEAD-SRGAAWLMDWLAALAEN 535 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 G L+ V L AV+A+ A ++ L+ D ++ Sbjct: 536 DGGKLNPVQIQALSDAVQANTTADPRLQNLEQFRSQLRATDDD-------------GDLY 582 Query: 624 VLLDQYTANGTYGQYFNSD--EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENR 681 L ++ G +G F +P L D ++ +L + D V + + Y+ R Sbjct: 583 NRLGRWDETGQFGWLFGGKGLDP-LAFDNRLTAFDLTEIFDND----VVRTAWLSYVFRR 637 Query: 682 MYRTPRN-LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 + R + L V+DE W+LLD N ++ T R+ A + +TQ + Sbjct: 638 VERLVEDEHPTLLVLDEAWKLLD--NPYFEARLKDWMLTMRKKNVAVVLLTQRVSHI--- 692 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 K S+A A ++ +++ S F +L P P + Sbjct: 693 KNSAAGDAILESAVTRLVYTSS---FNTAAELAPLHLTPTE 730 >UniRef50_C7CWC1 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7CWC1_ENTFA Length = 643 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 74/414 (17%), Positives = 160/414 (38%), Gaps = 65/414 (15%) Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 T + + D+FF+ YN+ + G G+GK+ +++ ++R G + FD + Sbjct: 221 TQTGGVVYWDLFFKSKKRLYYNLFLAGDMGSGKSTILKKILRDNAAKGHYIRGFDKSGEF 280 Query: 520 KSLCENMGGVY--LDGETLRFNPFANITDIDQSAERVRDQLSV----------------- 560 ++ + GG+ LDG+ N F + + +E D++ V Sbjct: 281 FNIVKEYGGISIPLDGQRGVINMFQVYPLVSKDSENDSDEVEVDIRGSFVQHISMLGILF 340 Query: 561 ---MASPNGNLDEVHEGLLLQAVRASWLAKENRARID----------DVVDFLKNASDSE 607 + L ++E ++ + KE+ A ID DF+ E Sbjct: 341 KIRNKAATDELVSIYEDIVWDFFTDFGIWKED-ASIDITSLPNEAYPTCTDFMNYLEKVE 399 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN--SDEPSLRDDAKMVVLELGGLEDRPS 665 + + + L ++ + + T Y F+ + P L D+ ++V ++ G+ S Sbjct: 400 ETIDEER-KGYLQKIKITMKPLTKQ--YKHIFDGKTSVPDLGDN-QIVFFDIAGISQLGS 455 Query: 666 -LLVAVMFSLIIYIENRMYRTPRN---------------LKKLNVIDEGWRLLDFKNHKV 709 + + +F + +I + R + ++ L V+DE +L+ + Sbjct: 456 EIFDSQLFIALNHIMGNITRIGKREKGYFDRNEKDWWDIIRCLVVVDECHNILNIEKAYA 515 Query: 710 GEFIEKGYRTARRHTGAYITITQ----------NIVDFDSDKASSAARAAWGNSSYKIIL 759 ++ AR++ TQ N D D+ +A++ + +G + YKI+L Sbjct: 516 AKWFVTLMSEARKYFTGIALATQRVQRMFPNADNAQDKDTVEAANKLKEIFGLTQYKILL 575 Query: 760 KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 KQ + +++ + F + ++I F +K+ S +L + + F Sbjct: 576 KQDSTSIGFLKKIFGNTFTETEYNLIPAFETSKEVGGSQGILSISGDQNIQMTF 629 >UniRef50_B9JPS0 Type IV secretion protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS0_AGRRK Length = 814 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 91/402 (22%), Positives = 144/402 (35%), Gaps = 41/402 (10%) Query: 352 RQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT 411 + L +G+S + + L + A ET Q I + G ++ N F Sbjct: 322 KDELVNGRSVMGYHHLTVMALGNTIKETESSA-QAITKELQNAGMVVVREDLNAEPAFYA 380 Query: 412 CLP----FMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAF 467 LP ++A + L G+ A N A P A N PA L T + Sbjct: 381 QLPGNFAYIARRALISSRNFCGL---ASYHNFALGKP--AGNHWGPAVSLLQT----TSM 431 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS--GGFAVVFDMGDGYKSLCEN 525 FF N V G +G+GKT + L+ + + FD G + Sbjct: 432 TPYFFNFHKGEVGNFIVTGPTGSGKTVALLFLLSQAMRARPQPRCAFFDKDRGGEIFIRA 491 Query: 526 MGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEV---HEGLLLQA 579 GG Y G FNP + D + V D LS + P +++ E +L +A Sbjct: 492 CGGQYEVLQPGMASGFNPL-QLEDSPDNRAFVHDLLSYLVRPKNEAEKLSAEQEKILARA 550 Query: 580 VRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 V + DV+ L+ + A + SR + T G F Sbjct: 551 VDHIFNVPIRERLFSDVIHLLRGG----EAAGRDDLASRFEAWC---------DTRGWLF 597 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 N+ D + +L + D P + A + I + +M R + + +DEGW Sbjct: 598 NNPVDLWNSDRGVFGFDLTAVLDDPEIRTAAL-GYIFFRIGQMLDGERPM--MLFVDEGW 654 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDK 741 +LL + K G FI +T R+ G TQ+ D + + Sbjct: 655 KLLG--DDKAGAFINDQLKTIRKKNGIVGIGTQSARDITTSR 694 >UniRef50_A1VQ79 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ79_POLNA Length = 814 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 78/313 (24%), Positives = 127/313 (40%), Gaps = 37/313 (11%) Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMGDGYKSLCENMGGVYLD--GETLR 537 + A+ G +G+GK+ L+ L+ G A VFD G L GG + D GE+ Sbjct: 454 HTAIIGPTGSGKSTLLATLVAQHFRYPGAQAFVFDKGYSMFPLVAAAGGQHYDIAGESDN 513 Query: 538 FNPFANITDIDQSAERV--RDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD 595 F + ID ER + L +A LQ V ++ E R + Sbjct: 514 IT-FCPLGQIDNELERTWAAEWLESLAE-------------LQGVA---MSPELRKELFR 556 Query: 596 VVDFLKNASD-SEQYAESPTIRSRLDEMIV-LLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 V+ L ++D +EQ S + + D + L+ Y+ G+ G+ +++ L+ D Sbjct: 557 AVNQLAASTDCAEQRTLSNFLLTLQDNRLREALEYYSLRGSAGRLLDAESDGLQADI-FQ 615 Query: 654 VLELGGLEDR-PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 V EL L R +++ V+ L +E R + P L V+DE W +L + Sbjct: 616 VFELEHLMARGEKIVLPVLAYLFHRLEQRFHGQP----TLLVLDEAWIMLGHPAFRAK-- 669 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 I + + R+ A I TQ++ D S A + + KI+L + L Sbjct: 670 IREWLKVLRKSNVAVIFATQSLSDL---SGSGIADVIFESCPSKILLPNPQAQTEALCGL 726 Query: 773 YPDQFLPLQRDMI 785 Y Q + L R I Sbjct: 727 Y--QAIGLNRRQI 737 >UniRef50_C2BD73 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD73_9FIRM Length = 1128 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 90/389 (23%), Positives = 160/389 (41%), Gaps = 69/389 (17%) Query: 411 TCLPFMAGKGLFKQLK----EAGVVQRAESFNVANLMPLVADNPLTPAGL---LAPTYRN 463 +CLP G+ + + EAG V MP N L P+G+ + P ++ Sbjct: 691 SCLPI--GQDMLPMKRSLTSEAGAV----------YMPFKTQNILDPSGMYYGVNPANKD 738 Query: 464 QLAFIDIFFRGMNNTNYNMAVCGTSGAGKT-GLIQPLIRSVLDSGGFAVVFDMGDGYKSL 522 + F+ N N + G G GK+ ++ ++L + ++ D + YK L Sbjct: 739 LILVNRKKFK-----NGNGFILGKPGGGKSFAAKNEILNTILTTDDDVIIVDPENEYKDL 793 Query: 523 CENMGGVYLDGETLRFNPF-ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR 581 C ++ G Y+ E + +P+ N+ DI+ E ++ + S + + + L R Sbjct: 794 CLSLNGEYIPIE--QSSPYHMNLFDIE---ENDKEDGGLEGSIKEKVGFITGCIGLMMER 848 Query: 582 ASWLAKENRARIDDVV-----DFLKNASDSEQ------YAESP---TIRSRLD------- 620 A L E A +DD + + K S+ +Q Y P T+R +L Sbjct: 849 A--LTIEENAILDDCITQIYKSWFKYVSEQKQNQQEVNYKYFPTLTTLREKLASLQGREK 906 Query: 621 ----EMIVLLDQYTANGTYGQYFNSDEPS-LRDDAKMVVLELGGLEDRPSLLVAVMFSLI 675 +I L YT G+ + D+ S + ++ V + GL + L M ++ Sbjct: 907 NEAYSLITALRMYTT-GSLNMF---DQLSNINPKNRLAVFSIRGLNNEGVLKKLAMNIIM 962 Query: 676 IYIENRMYRTPRNLKKLNV-IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 + R+ R +N + + IDE + L D N F+ ++ AR++ G ITQN+ Sbjct: 963 DQLWQRLLRNGKNGRPTWIYIDEIYLLFD--NANSMNFLRNLWKRARKYNGFPTGITQNV 1020 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSA 763 D A AR N+ + ++L QS+ Sbjct: 1021 DDL---LAIHDARTMLSNADFVMMLTQSS 1046 >UniRef50_C3DUE0 Hypothetical conjugation protein n=5 Tax=Bacillus thuringiensis RepID=C3DUE0_BACTS Length = 630 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 42/86 (48%) Query: 687 RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA 746 R K L +DE + L+D + + +F+ + R++ G + ITQ++VDF Sbjct: 497 RKEKVLLGVDECYLLIDPEVPETIKFLRNTSKRIRKYEGGLMVITQDLVDFLDPAVKRYG 556 Query: 747 RAAWGNSSYKIILKQSAKEFAKYNQL 772 +A N YKI+L Q K+ +L Sbjct: 557 QALLNNPVYKILLGQGEKDIEALEKL 582 >UniRef50_A9I2D7 Type IV secretion system protein VirB4 n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2D7_BORPD Length = 814 Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 103/260 (39%), Gaps = 22/260 (8%) Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLR 537 N + G +G GKT L L+ G VV+D G + L +GG Y + GE Sbjct: 444 NTMIIGMTGTGKTVLQGMLLTQAQKFGATCVVWDKDQGMQVLIMALGGRYFNIRLGEATG 503 Query: 538 FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 +NPF A VR + + + + + QAV+ + AR + Sbjct: 504 WNPFQMEPTKGNVAFMVRLVVFLAERRGEAVTTRQQADITQAVQQLTTLIDREARTLSTL 563 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN--SDEPSL-RDDAKMVV 654 + L S+ S TI +RL + +G YG F+ +DE SL D K + Sbjct: 564 NTLLPNPYSDDETTS-TIHARLAP-------WCQSGEYGWVFDNPADELSLATDTGKPAI 615 Query: 655 LELGGLEDRPSLL--VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 D LL AV + +Y+++R+ + +N+ DE L K+ E Sbjct: 616 FGF----DLTELLDDGAVRGAATMYLKHRIDALHDGRRIINLYDECQHPL--KDRHFQED 669 Query: 713 IEKGYRTARRHTGAYITITQ 732 ++ RT R+ G TQ Sbjct: 670 MQDASRTIRKKNGVLAFATQ 689 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P18004 Protein traC n=51 Tax=root RepID=TRAC_ECOLI 1097 0.0 UniRef50_B6ICF6 TraC protein n=1 Tax=Escherichia coli SE11 RepID... 857 0.0 UniRef50_A4WGS7 Type IV secretory pathway VirB4 components-like ... 830 0.0 UniRef50_D2TZZ8 Conjugal transfer ATP-binding protein TraC n=1 T... 797 0.0 UniRef50_A1WDF4 Putative uncharacterized protein n=3 Tax=Burkhol... 718 0.0 UniRef50_A0B4N6 Putative uncharacterized protein n=1 Tax=Burkhol... 697 0.0 UniRef50_Q0F363 Putative uncharacterized protein n=1 Tax=Maripro... 694 0.0 UniRef50_C5ANL2 Putative uncharacterized protein n=2 Tax=Burkhol... 681 0.0 UniRef50_D0SGY4 Type IV secretory pathway protein n=1 Tax=Acinet... 674 0.0 UniRef50_D1RMN8 Type-IV secretion system protein TraC n=2 Tax=Le... 671 0.0 UniRef50_A3VN21 TraC n=1 Tax=Parvularcula bermudensis HTCC2503 R... 667 0.0 UniRef50_A8QYQ2 TraC protein n=2 Tax=Legionellaceae RepID=A8QYQ2... 664 0.0 UniRef50_B6ESX9 Conjugative transfer protein TraC n=14 Tax=Vibri... 662 0.0 UniRef50_A4XE86 Type IV secretion/conjugal transfer ATPase, VirB... 654 0.0 UniRef50_B8EFP1 Type-IV secretion system protein TraC n=6 Tax=Sh... 653 0.0 UniRef50_C5T9V4 Type-IV secretion system protein TraC n=5 Tax=Be... 650 0.0 UniRef50_B2I3Z2 Type IV secretory pathway, VirB4 component n=1 T... 636 0.0 UniRef50_Q1N8Z9 ATPase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8... 632 e-179 UniRef50_Q1MY39 ATPase n=1 Tax=Bermanella marisrubri RepID=Q1MY3... 631 e-179 UniRef50_B4RLR8 TraC n=10 Tax=Neisseria RepID=B4RLR8_NEIG2 625 e-177 UniRef50_C4NVU8 TraC n=29 Tax=Gammaproteobacteria RepID=C4NVU8_E... 619 e-175 UniRef50_B7XGR7 Putative pilus assembly protein n=2 Tax=Pseudomo... 616 e-174 UniRef50_Q5ZTS4 TraC n=1 Tax=Legionella pneumophila subsp. pneum... 614 e-174 UniRef50_C5SIK7 Type-IV secretion system protein TraC n=1 Tax=As... 610 e-172 UniRef50_Q8L274 Pilus biogenesis protein n=5 Tax=Gammaproteobact... 598 e-169 UniRef50_Q2LTZ9 Sex pilus assembly protein n=3 Tax=Deltaproteoba... 585 e-165 UniRef50_Q6MB95 Putative inner-membrane protein traC n=1 Tax=Can... 570 e-161 UniRef50_Q3IUW4 TraC n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 563 e-158 UniRef50_A4JTN9 Sex pilus assembly protein n=2 Tax=Burkholderial... 560 e-158 UniRef50_Q5NX56 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 549 e-154 UniRef50_A0R7Q8 Sex pilus assembly protein n=1 Tax=Pelobacter pr... 547 e-154 UniRef50_Q1RJF1 Conjugative transfer protein TraC n=35 Tax=Ricke... 531 e-149 UniRef50_Q4HPB0 Conjugative transposon protein TraG, putative n=... 515 e-144 UniRef50_Q19NS3 TrhC n=11 Tax=Enterobacteriaceae RepID=Q19NS3_ECOK1 508 e-142 UniRef50_C4Z002 Putative inner-membrane protein TraC n=1 Tax=Ric... 489 e-136 UniRef50_D0Z4T2 IncF plasmid conjugative transfer pilus assembly... 487 e-136 UniRef50_A0L303 Type IV secretory pathway VirB4 components-like ... 485 e-135 UniRef50_B0RL05 Type IV secretory pathway VirB4 component n=2 Ta... 473 e-131 UniRef50_B7J837 Type-IV secretion system protein TraC n=1 Tax=Ac... 470 e-130 UniRef50_Q1NGT3 Sex pilus assembly protein n=1 Tax=Sphingomonas ... 438 e-121 UniRef50_A9AU11 Type IV secretion system protein n=1 Tax=Burkhol... 434 e-120 UniRef50_C0QUW6 Type-IV secretion system protein TraC n=1 Tax=Pe... 431 e-119 UniRef50_C1SHE1 Putative uncharacterized protein n=1 Tax=Denitro... 402 e-110 UniRef50_Q2SSU5 Membrane bound ATPase, putative n=1 Tax=Mycoplas... 329 3e-88 UniRef50_Q2IEL2 Type IV secretory pathway VirB4 components-like ... 302 4e-80 UniRef50_D2QVN3 Type IV secretory pathway VirB4 protein-like pro... 288 7e-76 UniRef50_C9LWN3 Putative conjugal transfer protein TrbE part 2 n... 280 1e-73 UniRef50_B0KAW2 Type IV secretory pathway VirB4 components-like ... 279 3e-73 UniRef50_B7ABM5 Type IV secretory pathway VirB4 component, ATPas... 278 6e-73 UniRef50_C9RCA0 AAA ATPase n=1 Tax=Ammonifex degensii KC4 RepID=... 275 4e-72 UniRef50_A4V6R2 Putative uncharacterized protein n=1 Tax=Pseudom... 274 1e-71 UniRef50_A4XMV0 AAA ATPase n=2 Tax=Caldicellulosiruptor saccharo... 270 2e-70 UniRef50_A8ZR82 Type IV secretory pathway VirB4 component, ATPas... 266 3e-69 UniRef50_C2FTT8 Conjugative transposon protein TraG n=1 Tax=Sphi... 263 3e-68 UniRef50_A5KS14 Type IV secretory pathway VirB4 components-like ... 261 8e-68 UniRef50_C6I0M0 Putative uncharacterized protein n=1 Tax=Leptosp... 250 1e-64 UniRef50_B9MP37 AAA ATPase n=1 Tax=Anaerocellum thermophilum DSM... 249 3e-64 UniRef50_A6EBE8 Conserved protein found in conjugate transposon ... 248 6e-64 UniRef50_A6L0N6 Conserved protein found in conjugate transposon ... 248 7e-64 UniRef50_A0M144 TraG-like protein n=3 Tax=Flavobacteriaceae RepI... 247 1e-63 UniRef50_C3KSP5 AAA ATPase n=2 Tax=Clostridium botulinum RepID=C... 246 3e-63 UniRef50_A4J314 Putative uncharacterized protein n=1 Tax=Desulfo... 245 4e-63 UniRef50_C5J6G0 TRSE-like protein n=1 Tax=Mycoplasma conjunctiva... 240 1e-61 UniRef50_B0K833 Type IV secretory pathway VirB4 components-like ... 240 2e-61 UniRef50_A5FFJ6 Bacteroides conjugative transposon TraG-like pro... 239 4e-61 UniRef50_Q2NC54 Type IV secretion system protein B4, putative n=... 237 1e-60 UniRef50_Q120F2 Type IV secretory pathway VirB4 components-like ... 236 3e-60 UniRef50_C3RFU1 Predicted protein n=9 Tax=Bacteroidales RepID=C3... 236 3e-60 UniRef50_C1XZE7 Putative uncharacterized protein n=1 Tax=Meiothe... 234 1e-59 UniRef50_Q601R8 Transfer complex protein n=7 Tax=Mycoplasma RepI... 233 2e-59 UniRef50_Q8GCN3 TraE/TrsE family NTPase n=6 Tax=Mycoplasma RepID... 233 3e-59 UniRef50_C3CTH0 Type IV secretory pathway VirB4 component-like p... 232 4e-59 UniRef50_A6NYK4 Putative uncharacterized protein n=1 Tax=Bactero... 231 9e-59 UniRef50_B6A599 Type IV secretion/conjugal transfer ATPase, VirB... 231 9e-59 UniRef50_Q4A7V5 TRSE-like protein n=2 Tax=Mycoplasma hyopneumoni... 230 2e-58 UniRef50_B3DVA0 Type IV secretory pathway, VirB4 component n=1 T... 228 5e-58 UniRef50_C8WY82 Type IV secretory pathway VirB4 protein-like pro... 222 6e-56 UniRef50_C4G4W2 Putative uncharacterized protein n=1 Tax=Abiotro... 222 6e-56 UniRef50_C7LKR7 Putative membrane protein n=3 Tax=Mycoplasma Rep... 220 2e-55 UniRef50_Q98QH8 TRSE-LIKE PROTEIN n=1 Tax=Mycoplasma pulmonis Re... 219 3e-55 UniRef50_D1JWZ2 Putative uncharacterized protein (Fragment) n=2 ... 215 5e-54 UniRef50_B0T8Q5 Putative conjugal transfer protein TrbE n=2 Tax=... 215 9e-54 UniRef50_C4XEH5 Putative uncharacterized protein n=1 Tax=Mycopla... 212 5e-53 UniRef50_Q6MU50 Transfer complex protein TrsE n=2 Tax=Mycoplasma... 211 9e-53 UniRef50_C5TJS3 VirB4 protein n=2 Tax=Proteobacteria RepID=C5TJS... 211 9e-53 UniRef50_C5ETG4 TRSE protein n=21 Tax=cellular organisms RepID=C... 209 5e-52 UniRef50_Q84BZ8 Putative membrane-bound ATPase n=2 Tax=Spiroplas... 208 8e-52 UniRef50_C3WQT8 Conjugal transfer protein trbe n=2 Tax=Fusobacte... 201 1e-49 UniRef50_C3WQ25 Conjugal transfer protein trbe n=3 Tax=Fusobacte... 193 2e-47 UniRef50_B2TS95 Putative uncharacterized protein n=8 Tax=Clostri... 190 2e-46 UniRef50_O87213 TrsE protein (TraE) n=11 Tax=Lactobacillales Rep... 188 9e-46 UniRef50_B5Z5T7 Putative uncharacterized protein n=1 Tax=Bacillu... 183 3e-44 UniRef50_UPI0001713796 hypothetical protein Aasi_0876 n=1 Tax=Ca... 179 3e-43 UniRef50_A0RVD5 ATPase/type IV secretory pathway component n=1 T... 153 3e-35 UniRef50_C5VLL8 Conjugative transposon protein TraG n=21 Tax=Bac... 150 2e-34 UniRef50_Q0ZNV8 Putative TrbE protein n=1 Tax=Sulfolobus islandi... 145 9e-33 Sequences not found previously or not previously below threshold: UniRef50_C3QQR1 Plasmid transfer protein n=32 Tax=Bacteroidales ... 233 2e-59 UniRef50_B0T9U2 CagE TrbE VirB component of type IV transporter ... 229 4e-58 UniRef50_C3DUE0 Hypothetical conjugation protein n=5 Tax=Bacillu... 225 7e-57 UniRef50_Q84BZ9 Putative membrane-bound ATPase n=6 Tax=Spiroplas... 225 9e-57 UniRef50_Q3JDC9 Putative uncharacterized protein n=4 Tax=Gammapr... 222 6e-56 UniRef50_C0BU73 Putative uncharacterized protein n=2 Tax=Bifidob... 219 4e-55 UniRef50_UPI0001BC40AC conjugal transfer ATPase TrbE n=1 Tax=Fus... 218 1e-54 UniRef50_A3EW83 Putative uncharacterized protein n=2 Tax=Leptosp... 215 4e-54 UniRef50_B9JPS0 Type IV secretion protein n=1 Tax=Agrobacterium ... 215 1e-53 UniRef50_A8F0L1 VirB4 n=48 Tax=Rickettsiales RepID=A8F0L1_RICM5 212 5e-53 UniRef50_C7I4D6 CagE TrbE VirB component of type IV transporter ... 212 5e-53 UniRef50_UPI00016C6849 Type IV secretory pathway VirB4 component... 210 3e-52 UniRef50_B4S9L3 CagE TrbE VirB component of type IV transporter ... 209 5e-52 UniRef50_Q9R2W4 Type IV secretion system protein virB4 n=30 Tax=... 208 8e-52 UniRef50_A4X0Q7 Type IV secretion/conjugal transfer ATPase, VirB... 207 2e-51 UniRef50_C3WX74 Conjugal transfer protein TrbE n=3 Tax=Fusobacte... 205 5e-51 UniRef50_A8S5W5 Putative uncharacterized protein n=3 Tax=Clostri... 204 8e-51 UniRef50_Q07GT1 VirB4 protein, putative n=1 Tax=Roseobacter deni... 204 1e-50 UniRef50_B5EKP3 CagE TrbE VirB component of type IV transporter ... 203 3e-50 UniRef50_C7WD64 Putative uncharacterized protein n=1 Tax=Enteroc... 202 6e-50 UniRef50_A2UVZ8 Putative plasmid-related protein n=1 Tax=Shewane... 199 5e-49 UniRef50_C6XES2 CagE TrbE VirB component of type IV transporter ... 198 8e-49 UniRef50_D0L172 CagE, TrbE, VirB component of type IV transporte... 196 2e-48 UniRef50_UPI0001C42939 hypothetical protein BpOF4_20614 n=1 Tax=... 194 9e-48 UniRef50_A1VQ79 CagE, TrbE, VirB component of type IV transporte... 194 1e-47 UniRef50_A8L0V0 Type IV secretory pathway VirB4 protein-like pro... 193 2e-47 UniRef50_C5F2I9 Type IV secretion/conjugal transfer ATPase n=1 T... 193 3e-47 UniRef50_C5SH59 Type IV secretion/conjugal transfer ATPase, VirB... 193 3e-47 UniRef50_Q1M9N8 Putative crown gall-like type IV secretion syste... 191 1e-46 UniRef50_Q3ZVN3 TRSE-like transmembrane ATPase n=8 Tax=Spiroplas... 191 1e-46 UniRef50_A5TXM1 Possible conjugal transfer protein TrbE n=1 Tax=... 191 1e-46 UniRef50_Q1JB81 TRSE protein n=26 Tax=Bacteria RepID=Q1JB81_STRPB 190 2e-46 UniRef50_A1B6Y4 AAA ATPase n=92 Tax=Bacteria RepID=A1B6Y4_PARDP 190 2e-46 UniRef50_C7N9N6 CagE TrbE VirB component of type IV transporter ... 188 6e-46 UniRef50_B1BR05 Putative Conjugative transfer gene TrsE homolog,... 188 7e-46 UniRef50_C2BRH4 Transfer complex protein n=1 Tax=Mobiluncus curt... 188 7e-46 UniRef50_B7U591 Putative uncharacterized protein n=5 Tax=Bacilla... 188 9e-46 UniRef50_C2LLI5 Type IV secretory pathway, VirB4 component n=31 ... 188 1e-45 UniRef50_Q2YIT8 Type IV secretion system protein virB4 n=43 Tax=... 188 1e-45 UniRef50_Q4UW68 VirB4 protein n=7 Tax=Xanthomonadaceae RepID=Q4U... 187 1e-45 UniRef50_Q1GN15 VirB4 protein n=18 Tax=Alphaproteobacteria RepID... 187 1e-45 UniRef50_Q4QPC7 Putative uncharacterized protein n=12 Tax=Gammap... 187 2e-45 UniRef50_B8I092 Putative uncharacterized protein n=4 Tax=Clostri... 187 2e-45 UniRef50_C8S1Y9 CagE TrbE VirB component of type IV transporter ... 187 2e-45 UniRef50_Q97HG4 Conjugative transfer gene TrsE homolog, ATPase n... 187 2e-45 UniRef50_C8WNM7 Type IV secretory pathway VirB4 protein-like pro... 186 3e-45 UniRef50_A0AXD0 Type IV secretion/conjugal transfer ATPase, VirB... 186 3e-45 UniRef50_D0SZZ9 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 186 3e-45 UniRef50_A6UMV4 Type IV secretion/conjugal transfer ATPase, VirB... 185 5e-45 UniRef50_D1PRT5 TRSE protein n=1 Tax=Subdoligranulum variabile D... 185 7e-45 UniRef50_A3EW09 Probable conjugal transfer protein (TrbE) n=4 Ta... 184 9e-45 UniRef50_A5IEK6 Type IV secretory protein VirB4 component n=7 Ta... 184 1e-44 UniRef50_B1I0C3 Putative uncharacterized protein n=1 Tax=Lysinib... 184 1e-44 UniRef50_D2LJR2 CagE TrbE VirB component of type IV transporter ... 184 1e-44 UniRef50_C9M9C2 Ribosome recycling factor n=1 Tax=Jonquetella an... 184 1e-44 UniRef50_C1F578 Type IV secretion/conjugal transfer ATPase, VirB... 184 2e-44 UniRef50_A3W6D5 Type IV secretion system protein B4, putative n=... 183 2e-44 UniRef50_B0FYU0 TrsE n=6 Tax=Staphylococcus aureus RepID=B0FYU0_... 183 2e-44 UniRef50_P54910 Conjugal transfer protein trbE n=24 Tax=Alphapro... 183 2e-44 UniRef50_D1AV72 CagE TrbE VirB component of type IV transporter ... 183 4e-44 UniRef50_C1F4R3 Type IV secretion/conjugal transfer ATPase, VirB... 182 4e-44 UniRef50_C2BD73 Putative uncharacterized protein n=1 Tax=Anaeroc... 181 8e-44 UniRef50_Q9PHJ8 Conjugal transfer protein n=6 Tax=Proteobacteria... 181 8e-44 UniRef50_B2IAS2 Type IV secretion/conjugal transfer ATPase, VirB... 181 9e-44 UniRef50_Q1QFG8 Type IV secretion/conjugal transfer ATPase, VirB... 181 1e-43 UniRef50_Q0AD16 CagE, TrbE, VirB component of type IV transporte... 180 2e-43 UniRef50_D0ZHN0 Type IV secretory pathway component n=1 Tax=Edwa... 179 4e-43 UniRef50_C6J2V9 Predicted protein n=1 Tax=Paenibacillus sp. oral... 179 4e-43 UniRef50_Q2SRS9 Membrane protein, putative n=1 Tax=Mycoplasma ca... 179 4e-43 UniRef50_P55399 Probable conjugal transfer protein trbE part 2 n... 179 4e-43 UniRef50_Q832B8 TraE protein, putative n=41 Tax=Bacteria RepID=Q... 179 5e-43 UniRef50_D0UIP4 ATPase n=5 Tax=Aggregatibacter actinomycetemcomi... 179 5e-43 UniRef50_A6V9Y0 Type IV secretory pathway, VirB4 component n=62 ... 179 5e-43 UniRef50_Q5I721 VirB4 n=1 Tax=Dichelobacter nodosus RepID=Q5I721... 179 5e-43 UniRef50_D1WC41 ATPase n=9 Tax=Lactobacillus RepID=D1WC41_9LACO 179 5e-43 UniRef50_D1PSM3 Putative uncharacterized protein n=1 Tax=Subdoli... 179 6e-43 UniRef50_Q6LGX0 Hypothetical TrbE protein n=1 Tax=Photobacterium... 178 6e-43 UniRef50_B5UW44 TrsE protein n=1 Tax=Bacillus cereus AH1134 RepI... 178 6e-43 UniRef50_C9L0W6 Bacteroides conjugation system ATPase, TraG fami... 178 1e-42 UniRef50_Q7WZM0 Putative mating pair formation protein n=1 Tax=S... 177 2e-42 UniRef50_Q5DY65 VirB4 ATPase n=1 Tax=Vibrio fischeri ES114 RepID... 177 2e-42 UniRef50_A2UVP9 Plasmid transfer protein n=1 Tax=Shewanella putr... 176 3e-42 UniRef50_B0S4N6 TraE like protein n=1 Tax=Finegoldia magna ATCC ... 175 8e-42 UniRef50_C6N556 Type IV secretory protein VirB4 component n=3 Ta... 175 8e-42 UniRef50_C5D061 Type IV secretion/conjugal transfer ATPase, VirB... 174 1e-41 UniRef50_A4ITY7 TrsE n=7 Tax=Bacillaceae RepID=A4ITY7_GEOTN 174 2e-41 UniRef50_B9NXT4 Putative VirB4 protein n=1 Tax=Rhodobacteraceae ... 173 2e-41 UniRef50_B1Y1W2 Type IV secretion/conjugal transfer ATPase, VirB... 173 2e-41 UniRef50_A8PL22 CagE, TrbE, VirB component of type IV transporte... 173 4e-41 UniRef50_Q11ZH3 Type IV secretory pathway VirB4 components-like ... 173 4e-41 UniRef50_C7H9G2 Putative TraE protein n=5 Tax=Clostridiales RepI... 171 9e-41 UniRef50_Q6XGG0 Pilx3-4/VirB3-4-like protein n=23 Tax=Bacteria R... 171 1e-40 UniRef50_C8WNA5 Type IV secretory pathway VirB4 protein-like pro... 169 3e-40 UniRef50_Q2NKG6 TrwK protein n=18 Tax=Proteobacteria RepID=Q2NKG... 169 3e-40 UniRef50_B5IC46 Putative uncharacterized protein n=3 Tax=Aciduli... 169 5e-40 UniRef50_B9ZQ77 Type IV secretory pathway VirB4 components-like ... 168 7e-40 UniRef50_B2TSH9 TriC protein n=3 Tax=Enterobacteriaceae RepID=B2... 168 8e-40 UniRef50_A9EBC2 CagE, TrbE, VirB component of type IV transporte... 168 1e-39 UniRef50_A8PLL0 ATPase n=1 Tax=Rickettsiella grylli RepID=A8PLL0... 167 2e-39 UniRef50_Q0ACT3 Type IV secretion/conjugal transfer ATPase, VirB... 167 2e-39 UniRef50_Q3EN28 TRSE PROTEIN n=9 Tax=Bacillales RepID=Q3EN28_BACTI 166 5e-39 UniRef50_B9Y5S2 Putative uncharacterized protein n=11 Tax=Firmic... 165 7e-39 UniRef50_C8SC72 Type IV secretory pathway VirB4 protein-like pro... 164 1e-38 UniRef50_C7CWC1 Predicted protein n=2 Tax=Enterococcus faecalis ... 163 3e-38 UniRef50_Q971Q3 Putative uncharacterized protein ST1312 n=1 Tax=... 163 3e-38 UniRef50_B9KGH4 Secretion/conjugal transfer ATPase VirB3/4 n=11 ... 163 4e-38 UniRef50_B1BPA3 Putative uncharacterized protein n=4 Tax=Clostri... 162 4e-38 UniRef50_B5TTQ0 TraE n=3 Tax=environmental samples RepID=B5TTQ0_... 162 6e-38 UniRef50_A9L6R4 CagE TrbE VirB component of type IV transporter ... 162 7e-38 UniRef50_Q8E597 Putative uncharacterized protein gbs1135 n=2 Tax... 161 1e-37 UniRef50_D2S2X7 Putative uncharacterized protein n=1 Tax=Haloter... 161 2e-37 UniRef50_A7VXU4 Putative uncharacterized protein n=1 Tax=Clostri... 160 2e-37 UniRef50_A5FU41 Type IV secretion/conjugal transfer ATPase, VirB... 160 2e-37 UniRef50_C3RPG7 Predicted protein n=1 Tax=Mollicutes bacterium D... 160 2e-37 UniRef50_D0RX90 PrgJ n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=D... 160 2e-37 UniRef50_A9I2D7 Type IV secretion system protein VirB4 n=1 Tax=B... 159 4e-37 UniRef50_Q21QJ8 Type IV secretory pathway VirB4 components-like ... 159 4e-37 UniRef50_P17794 Protein virB4 n=18 Tax=root RepID=VIRB4_AGRT5 159 6e-37 UniRef50_C6LA09 Putative TRSE protein n=1 Tax=Bryantella formate... 157 2e-36 UniRef50_Q46698 TraB protein n=9 Tax=root RepID=Q46698_ECOLX 156 3e-36 UniRef50_Q9F245 ATPase n=3 Tax=Aggregatibacter actinomycetemcomi... 156 4e-36 UniRef50_D2B290 Putative uncharacterized protein n=1 Tax=Strepto... 155 7e-36 UniRef50_A7VRX8 Putative uncharacterized protein n=3 Tax=Clostri... 155 9e-36 UniRef50_C8WH82 Type IV secretory pathway VirB4 protein-like pro... 154 1e-35 UniRef50_Q6F059 Uncharacterized protein pXO2-09/BXB0008/GBAA_pXO... 154 2e-35 UniRef50_C8VVQ1 Type IV secretory pathway VirB4 protein-like pro... 153 3e-35 UniRef50_C6BQD5 Type IV secretory pathway VirB4 components-like ... 153 3e-35 UniRef50_B9LVJ9 Conjugation protein n=1 Tax=Halorubrum lacusprof... 152 5e-35 UniRef50_C2HEY2 Conjugal transfer protein n=3 Tax=Enterococcus f... 152 6e-35 UniRef50_A7B3Y3 Putative uncharacterized protein n=2 Tax=Clostri... 151 1e-34 UniRef50_Q1ZJS6 Putative uncharacterized protein n=1 Tax=Photoba... 151 2e-34 UniRef50_O25189 VirB4 homolog n=5 Tax=Helicobacter pylori RepID=... 151 2e-34 UniRef50_A4VUZ6 Type IV secretory pathway, VirB4 component n=22 ... 150 2e-34 UniRef50_A5UVD8 Type IV secretory pathway VirB4 components-like ... 149 3e-34 UniRef50_D0Z5G8 Conjugative transfer protein TrbE n=1 Tax=Photob... 149 5e-34 UniRef50_A9IYE3 Vbh4 protein 2 n=1 Tax=Bartonella tribocorum CIP... 149 5e-34 UniRef50_B9D147 VirB4 n=1 Tax=Campylobacter rectus RM3267 RepID=... 149 5e-34 UniRef50_B0ZDY6 Pilx3-4 protein n=16 Tax=Enterobacteriaceae RepI... 149 6e-34 UniRef50_B2TH83 CagE TrbE VirB component of type IV transporter ... 148 7e-34 UniRef50_Q9ZLT4 CAG pathogenicity island protein 23 n=101 Tax=He... 148 1e-33 UniRef50_D1QR49 Plasmid transfer protein n=1 Tax=Prevotella oris... 146 4e-33 UniRef50_B4YK33 TagB4 n=4 Tax=Betaproteobacteria RepID=B4YK33_9BURK 146 4e-33 UniRef50_B9NX71 Putative uncharacterized protein n=1 Tax=Rhodoba... 146 5e-33 UniRef50_Q5ZW33 LvhB4 n=5 Tax=Legionella pneumophila RepID=Q5ZW3... 145 6e-33 UniRef50_B6FMB2 Putative uncharacterized protein (Fragment) n=1 ... 145 9e-33 UniRef50_B3DQX8 Truncated type IV secretory pathway VirB4 compon... 144 1e-32 UniRef50_B2CG16 Fused VirB3/VirB4 n=2 Tax=Campylobacter fetus su... 144 1e-32 UniRef50_UPI00004A2EB8 VirB4-like protein n=1 Tax=Moraxella bovi... 143 4e-32 UniRef50_D2P3D1 Putative uncharacterized protein n=1 Tax=Listeri... 142 7e-32 UniRef50_A9HT13 Type IV secretion n=1 Tax=Gluconacetobacter diaz... 142 7e-32 UniRef50_C2C2P3 Possible vancomycin-resistant virulence factor n... 142 8e-32 UniRef50_B9DXM8 Putative uncharacterized protein n=9 Tax=Firmicu... 141 8e-32 UniRef50_C2JSV3 Conjugal transfer protein n=12 Tax=Enterococcus ... 141 1e-31 UniRef50_B5Z4X1 Conjugal transfer protein n=3 Tax=Escherichia co... 141 2e-31 >UniRef50_P18004 Protein traC n=51 Tax=root RepID=TRAC_ECOLI Length = 875 Score = 1097 bits (2836), Expect = 0.0, Method: Composition-based stats. Identities = 875/875 (100%), Positives = 875/875 (100%) Query: 1 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT 60 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT Sbjct: 1 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT 60 Query: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS Sbjct: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 Query: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME Sbjct: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 Query: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED Sbjct: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 Query: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP Sbjct: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 Query: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS Sbjct: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG Sbjct: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY Sbjct: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP 540 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP Sbjct: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP 540 Query: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL Sbjct: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL Sbjct: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA Sbjct: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL Sbjct: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL Sbjct: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 Query: 841 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA Sbjct: 841 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 >UniRef50_B6ICF6 TraC protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF6_ECOSE Length = 868 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 402/862 (46%), Positives = 575/862 (66%), Gaps = 7/862 (0%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPI 71 ++ L+ K PD S +A ++L EM +P F+ LLPYR Y+ +S LF+N T GF+LE P+ Sbjct: 8 LSQLMGGWKKPDGSQQAQQILDEMDYPSFASLLPYRQYDPDSELFINAKTAGFVLECRPL 67 Query: 72 NGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAIT 131 +GANE+I ++LD+ LR K+PR IPL L+ S V +E+GL +F W G++A+ FNAIT Sbjct: 68 SGANEAISKSLDYFLRDKIPRKIPLTFTLVGSPCVRPMLEHGLADFRWQGKRADEFNAIT 127 Query: 132 RAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQ 191 RA+Y +AA TQF +G PLTLRHYR+F+SY + E+ + + A L Sbjct: 128 RAFYERAALTQFANKKG--YPLTLRHYRLFVSYAEEVGSLTEQKKTELNQVANRVVAGLA 185 Query: 192 GASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 A + +Q VD + + +V E+ N ++ P + + LN +CV+ S L + D + Sbjct: 186 SAGLWSQRVDKKGLVSLVRELANFRHGNIEPPNGSVAEFEPLNTECVDRSLRLMLHPDRI 245 Query: 252 TLGLRENGRNSTAR--ILNFHLARNPEIAF-LWNMADNYSNLLNPELSISCPFILTLTLV 308 L+ R ILNF L +NPE + LW M DN SN+ +P +ISCPF++TL L Sbjct: 246 EQSLQSRRGGERERTRILNFMLEKNPEKPYALWQMGDNISNVTDPLCTISCPFVMTLALE 305 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 VE+Q T EAN K++ L+KK+ + +AK+ PSV+K+A EWG LR+ L + Q S+ ++ N Sbjct: 306 VEEQAGTQREANRKFIQLDKKANSPFAKFVPSVKKQAAEWGGLRESLSTNQDSLARFYFN 365 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 +T FC+D +E ALE E +LN+FR+NG + P F +RN+L+ PFM +GL+ + Sbjct: 366 VTLFCEDRDEVALETEMTVLNTFRRNGLSMYMPEFMQLRNYLSVFPFMMPEGLWSDICRT 425 Query: 429 GVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFR--GMNNTNYNMAVCG 486 +QRA + NVAN++P+VADN + GL P+YRNQL+F+++F R G++ N N++V G Sbjct: 426 NAIQRARASNVANILPVVADNQVCLQGLPIPSYRNQLSFLNLFDRNAGLDTDNNNLSVTG 485 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITD 546 TSG GK+ L+Q +IR VLDSGG A VFDMGD YK LC N+GGVYL+ LRFNPFANI D Sbjct: 486 TSGGGKSFLMQGIIRQVLDSGGRAWVFDMGDSYKGLCRNVGGVYLNALDLRFNPFANIKD 545 Query: 547 IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 I SAE +R+ L V+A+P+GN D+ LLL+AV WL K+N ARIDD+V +++ A + Sbjct: 546 ITASAESIRNLLVVLANPSGNCDDTFMSLLLKAVHEVWLRKKNSARIDDIVHYMRKALEQ 605 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 +Y ++ T+RSR+DE+IV L++Y + G YG+YFNS++PSL D+ + VLE+G L+D+P L Sbjct: 606 PEYRDTTTVRSRMDEIIVGLEKYCSWGLYGEYFNSEKPSLDDNVRFSVLEMGELKDKPDL 665 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 L AVMFS++IY+E RMY + R K+ +IDE W+LL N + +FIE GYRTAR++ GA Sbjct: 666 LAAVMFSMMIYVEQRMYLSDRQQHKVCLIDEAWKLLSKDNKRAEDFIENGYRTARKYNGA 725 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIG 786 YITITQ I DFD KAS AA+AAW NSS+KIIL+Q+ F KY PDQF +R++I Sbjct: 726 YITITQGIEDFDGQKASGAAKAAWANSSFKIILRQNRDAFRKYCLDNPDQFNRFEREVIE 785 Query: 787 KFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 F AA++ FSSF+L+ S+HRL +DP+SR M+SSDG DF++ + + G IH+ + Sbjct: 786 GFPAAREAHFSSFMLRYGGQVSFHRLLLDPISRVMFSSDGEDFDYREAGLRAGKDIHDII 845 Query: 847 WQLAWKKSGPEMASLEAWLEEH 868 +LAW+K EM +L W++ + Sbjct: 846 GELAWRKFPQEMETLTEWIKHN 867 >UniRef50_A4WGS7 Type IV secretory pathway VirB4 components-like protein n=5 Tax=Enterobacteriaceae RepID=A4WGS7_ENT38 Length = 866 Score = 830 bits (2144), Expect = 0.0, Method: Composition-based stats. Identities = 380/870 (43%), Positives = 542/870 (62%), Gaps = 13/870 (1%) Query: 7 AVTQAVNSLVTALKLPDESAKANEVLGEM-SFPQFSRLLPYRDYNQESGLFMNDTTMGFM 65 +V + SLV + K D +A A L + +P LPYR Y+ + LF+N+ + GF+ Sbjct: 2 SVLDNLMSLVNSRKREDGAATARANLEQTWGYPSLVAALPYRYYDDVNELFINEGSAGFI 61 Query: 66 LEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAE 125 LEA P+ GANE ++ ALD MLR KLPR P+ + L++S+ VG+RI G+ W G+ +E Sbjct: 62 LEAAPLPGANEQVIAALDDMLRKKLPRKTPVSVLLLASKCVGERIARGVSSDMWKGDMSE 121 Query: 126 RFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKI 185 N IT+A++ ++A PL LR+YR+FI Y P+K+ S+ + ++ + Sbjct: 122 YLNKITKAFWQRSALKGLANE--REYPLYLRNYRIFIVYGKPAKRFSQQVMDDLVQVRNT 179 Query: 186 IRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLK 245 IR SL A I T +F+ ++ EM+N+ + + + LN Q VE D++ Sbjct: 180 IRVSLGAARIETINTHVNSFLSVMREMMNYRQEQVMTSSGDYNEDEKLNRQIVEPGIDVR 239 Query: 246 VRADYLTLGLR----ENGRN---STARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 V+ Y+ + L ENG S R++N LA++P+ LW ADN NL P+L I Sbjct: 240 VKPSYIRVELPDRIEENGTRLPASACRVVNMQLAKSPKRFALWQGADNLQNLRFPDLGIP 299 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 CPF+L+ T +E+Q T +EA K MDL KK+ ++Y + FPS +++A+EW R++L + Sbjct: 300 CPFMLSWTTELEEQTATQNEALRKDMDLSKKANSAYGQLFPSTKRQAEEWRRNREQLSNN 359 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + +LN+T F DNN A E +N FRKN E+++ ++ MRN+L C PFM Sbjct: 360 EIAFCRTYLNLTLFTPDNNTDAQACELAAVNVFRKNDLEMVTVQYQQMRNWLGCFPFMMQ 419 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNT 478 +G+++ LK G R +S+N NLMP+VA+ L+ G+ PTYRNQ+AF D+F +T Sbjct: 420 EGMWEDLKMTGATLRCKSWNAVNLMPVVAERQLSHVGMPLPTYRNQVAFFDMFGEENGST 479 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF 538 N+N+AV GTSGAGKT LIQ ++R VL++GGFA V DMGDGYK+ C GGVYLDG LRF Sbjct: 480 NFNIAVTGTSGAGKTFLIQGILRDVLNAGGFAWVIDMGDGYKNYCHQAGGVYLDGAKLRF 539 Query: 539 NPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD 598 NPFAN+ DI+QSAE + L+V+ASP LD V E +L +AV +W K++ ARIDDV + Sbjct: 540 NPFANVKDINQSAEGIVRLLTVLASPTEPLDGVCEAILQKAVMTAWEKKQHGARIDDVHN 599 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 +L + + +E +A+ PTI SRL E+ +LLD Y G G+YFN+D P+L + + VLEL Sbjct: 600 YLTDPAVNEAFADKPTIISRLAELAMLLDTYCTWGPDGEYFNADSPTLDGETRFAVLELL 659 Query: 659 GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR 718 LED+P LL +++FSLI+ I+ +MY +PR+LKK+ +IDE WRLL N FIE GYR Sbjct: 660 SLEDKPKLLSSILFSLILAIQEKMYHSPRDLKKVCIIDEAWRLLGGSNPHAARFIETGYR 719 Query: 719 TARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL 778 T RRH GA+ITITQ I DF AS A AAW NSS KI L Q + F +Y PDQF Sbjct: 720 TVRRHRGAFITITQGIKDF---SASKEAEAAWNNSSTKITLLQDTRAFKQYLADNPDQFS 776 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 +++++I F A +SS L+ SS+HRLFVDP++RAM+SS G DF F+Q ++ Sbjct: 777 DMEKEVIRGFQPALLTGYSSLLVSAGEFSSFHRLFVDPITRAMFSSRGEDFAFMQDAQRA 836 Query: 839 GLSIHEAVWQLAWKKSGPEMASLEAWLEEH 868 G + EA + LA KK GPE+ LE W++ Sbjct: 837 GSTAEEAAYLLAQKKFGPELQELEEWIKAA 866 >UniRef50_D2TZZ8 Conjugal transfer ATP-binding protein TraC n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ8_9ENTR Length = 848 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 369/850 (43%), Positives = 555/850 (65%), Gaps = 10/850 (1%) Query: 17 TALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANE 76 AL D + + + L M +P LLPYRDY+ + LF+N ++GF+LEA P+ GANE Sbjct: 3 NALMEKDTTRETAKKLESMDYPHLRDLLPYRDYDGDHQLFINQNSLGFLLEAQPLIGANE 62 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 +VE+L+ +++ LPR IPL + L+SSQ V +++ GLR+FSW G +A+ N IT+ +Y+ Sbjct: 63 KLVESLEELVKNNLPRDIPLQVILLSSQTVYEKLTTGLRDFSWQGNRADECNQITQGFYL 122 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT 196 AA QF P+ NLPLTLR Y +F ++C P K+ + ++I+++ + + + ++L + I Sbjct: 123 DAARHQFANPQ--NLPLTLRDYHLFFAFCQPCKRITESEIIKVREIRRNLLSALSASDIH 180 Query: 197 TQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL-GL 255 + F+ ++ EMIN + + L P Q D+N Q V+++ + Y+ + G Sbjct: 181 AENASITRFLQMMREMINPDTERLKPYSAQWTEDKDINQQIVQNNTCYWFKPGYVEITGR 240 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 E + ++R ++F+L NP +LW + SNLLNP+ I CPF+++ + EDQ ++ Sbjct: 241 NEEDKPFSSRAIHFNLDSNPRAHYLWQNGNIISNLLNPQNGIRCPFVMSFIIQTEDQSRS 300 Query: 316 HSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 EAN ++DLE+K +SYAK+ PS +++ EW LR+ L S +S+ Y+L +T FC+D Sbjct: 301 QGEANKNFLDLERKVSSSYAKYIPSTKRQHAEWKSLREGLLSTATSLSGYYLGVTLFCRD 360 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG--KGLFKQLKEAGVVQR 433 + E A + + +F G ++ MRNFL LPF G L+K + G +QR Sbjct: 361 DEEEAAKEAERTKKAFSMQGLNMVRADLMQMRNFLGHLPFAVGDNPKLWKDFLKTGAIQR 420 Query: 434 AESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 AESF NL+P++ADN L+ AG++ P+YR+QLAF+DIF + NTN+N GTSGAGK+ Sbjct: 421 AESFQAVNLLPIIADNKLSQAGIVFPSYRHQLAFLDIFDASLPNTNFNWFESGTSGAGKS 480 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAER 553 L Q + R VLDSGG+ +FD+GD YK+ C+++GG Y++GETLRFNPFANITDI SAER Sbjct: 481 VLAQTIARQVLDSGGYLSIFDIGDSYKAFCQSVGGTYINGETLRFNPFANITDITLSAER 540 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 +RDQL ++ASPNG +DEVHE L+L+A+ SW K+ RIDDVV++LK + E+ Sbjct: 541 IRDQLCILASPNGLMDEVHESLILEAITESWPNKKQDMRIDDVVNYLKKHRG--KIQEAS 598 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 I R+DE++VLL++YT G YG+YFNS EP+L+ D + VV ELGGL+ LL+AV+F+ Sbjct: 599 RITGRIDEILVLLNKYTTKGIYGRYFNSSEPTLKPDMRFVVTELGGLKANRDLLMAVLFT 658 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 L+++ EN MY TPR+L+K+N+IDEGW+LLD K+ KV +FIE+GYRTARRH G++ T+TQ+ Sbjct: 659 LMLWAENLMYNTPRSLRKMNIIDEGWKLLDAKSPKVRDFIEEGYRTARRHNGSFGTVTQS 718 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 I D S+AA AA+ NSS+K L Q AK F + + P F ++ +I KF A Sbjct: 719 IRD---KNLSTAALAAYDNSSFKFTLMQDAKAFNSFQKEEPSTFNEMEWALIQKFPPASR 775 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 FS+ L V +SS+HRL +DPLS ++SS G DF + +++ KEG +I++ ++++A +K Sbjct: 776 AGFSAVHLSVGGYSSFHRLMLDPLSNELFSSRGDDFTYREKRLKEGANINDIIFEMAQQK 835 Query: 854 SGPEMASLEA 863 +A L+ Sbjct: 836 DPALLAKLKQ 845 >UniRef50_A1WDF4 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A1WDF4_ACISJ Length = 874 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 204/855 (23%), Positives = 367/855 (42%), Gaps = 40/855 (4%) Query: 21 LPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVE 80 P A ANEV S +L Y Y+ ++GLF ND ++ F E I GA++ + Sbjct: 31 QPAPVAAANEV---TSLYGLHSILKYDQYDPDTGLFYNDNSVAFCFEVIAQTGADDDMAS 87 Query: 81 ALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSW--SGEQAERFNAITRAYYMKA 138 L+ + +P + L S ++ D+ + + + + F ++ Sbjct: 88 RLNTLFTL-VPPHYGIQWCLFGSPVLDDQFQAYMDQRHIAVDNGKTTPFFQELAKRRVEY 146 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 P N +++ R+ S + + EM L + +RASL+ AS+ + Sbjct: 147 IYKAKGKPLWPNDNYVVKNIRLLFSITKAGSFRDAKLVEEMYELRETVRASLRTASLPSF 206 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRR----QLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 +DA I + ++N P+S++ K + D + Q ++V+A+ L G Sbjct: 207 PLDADGLISFLWPILN--PESMFSKEPFPDLRYDDGKSIKNQVTAFGQHVRVKANELLFG 264 Query: 255 LR---ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 L + + + F + + P+ LW MA+ + + L CPF++ + D Sbjct: 265 LPPEKQGDEDKRIAVRGFGVLQYPQKKELWEMANIIGSFFDDGLQYPCPFLVCGGVFTLD 324 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 +A +K ++ +K+ A++ P ++ +A +W + +L +G S+ + + Sbjct: 325 PNVVDGKAQIKAARTKQNAKSKMAEFQPELQAQANDWDIVLHQLNNG-GSMCELYHTLLL 383 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 F Q LN +R F + + + + LP + + L++ ++ Sbjct: 384 FAPKRVIN--RASQVALNVWRSERFTICPLQLLQLTALYSSLPMTLTETVRDDLQKLRLI 441 Query: 432 QRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 + N ++ P++ + ++ R F+D + NYN+ V G SG+ Sbjct: 442 TSKTTVNAVDMAPVIGEWKGAGDPVMMFFGRRGTPTFLDFY--SNQQGNYNVFVAGVSGS 499 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANIT-- 545 GK+ + ++ + G V D+G Y++L G +L+ L NPF + Sbjct: 500 GKSVTMNEVVSAYRGIGARVWVIDVGRSYQNLIRLQKGTFLEFTPSTKLCINPFTWVGTD 559 Query: 546 ---DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN 602 D ++ + MASPN L E L+ +A+ A W + D+L + Sbjct: 560 DELDFKAEMRMLKPMIGRMASPNAPLTEFQYALIGEAITAVWQDYGQDTNPTRIRDYLLS 619 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED 662 +E + E+ L +T +G YG +FN ++ DA MV LEL L++ Sbjct: 620 NIKNESGSTE----RVAYELAKQLAPFTKDGVYGDFFNG-RANISLDADMVGLELEELKN 674 Query: 663 RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 P L V+F L I + MY T R+ KKL ++DE W+LL + + EFIE+GYR AR+ Sbjct: 675 APELRRVVLFVLTSRIAHDMYLT-RDRKKLCLVDEAWQLLG-ADKETAEFIEEGYRRARK 732 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 + G + TQ I D + AA+AA+ N+ +KI+L+Q K K + F P + Sbjct: 733 YNGIFCVGTQGIEDAYKN---DAAQAAYNNADWKILLRQDRKNLEKLIEDGMVNFSPAVK 789 Query: 783 DMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI 842 M+ + + FS L+ N S R DP S M S++ DF ++G S Sbjct: 790 RMLLSLRTERGR-FSEMLISSPNGDSVVRHIPDPFSLLMASTNAQDFNECNALLEQGHST 848 Query: 843 HEAVWQLAWKKSGPE 857 EA+ + +++ E Sbjct: 849 MEALEIMLARRAPQE 863 >UniRef50_A0B4N6 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4N6_BURCH Length = 864 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 208/868 (23%), Positives = 372/868 (42%), Gaps = 44/868 (5%) Query: 7 AVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFML 66 A+++A+ L P A + + LLPY Y+ + L+ N ++GF+L Sbjct: 18 AISEAILGTEDDLGPPAPVAADQRRVETVGLH---NLLPYDQYDPATELYYNTDSVGFVL 74 Query: 67 EAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGL---REFSWSGEQ 123 P GA+ + +L L +P G L L+ ++ + + + RE++ +G Sbjct: 75 AVAPQTGADAELTRSLHG-LYDSVPAGYGLQWMLLGDPIIEESLNAYVDLRREYAEAGRA 133 Query: 124 AERFNAIT--RAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMEN 181 + RA +++ Q PL G N +T + R+ +S I E++N Sbjct: 134 PSFYLEQAERRAAFIRGKLGQ-PLFLGQNYSITDK--RLLLSIVRKGSLDDLKLIEEIQN 190 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP---DSLYPKRRQLDPYSDLNYQCV 238 + ++ A+L AS+ ++T + + ++N + D + + Q Sbjct: 191 IRDVVGATLSSASLASRTAEPDDLKRFLWPILNPSAFFGDGAETIDQTYSDDKPIRDQLT 250 Query: 239 EDSFDLKVRADYLTLGLRENGRNS---TARILNFHLARNPEIAFLWNMADNYSNLLNPEL 295 ++V+A +L G+ + + +F + + P+ LW M + +L N Sbjct: 251 AFGHHMRVKAKHLLYGVPPEDADEPDARIAVRSFGVHQYPKSKELWEMNNIVGSLFNDVH 310 Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRL 355 CP+++TL +++ DQ + A L+ + +++ AK P + + ++W + +L Sbjct: 311 QYPCPYLITLGVLILDQTAVETRAALRGARATQNAESKIAKLQPELALQNQDWKAVSMQL 370 Query: 356 GSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPF 415 G S+ + +T F + + +R F+L + FL+ LP Sbjct: 371 TQG-GSMCELYHTLTLFAP--RKKMEQCVAAAKGIWRSERFKLFPMLTQQLTTFLSALPM 427 Query: 416 MAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP--AGLLAPTYRNQLAFIDIFFR 473 M + LK+ ++ + N ++ P++ + T A LL R A +DI+ Sbjct: 428 MLTSDMRDDLKKFRLITTKTTVNATDMAPVLGEWSGTSGRANLLFFGRRGTPALVDIY-- 485 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD- 532 + TNYN V GTSGAGK+ L+ +I + GG + D+G Y+ + G Y+D Sbjct: 486 -SSGTNYNGFVDGTSGAGKSVLLNEIIGAFRSVGGIVRICDVGYSYEKQIDMGDGQYIDF 544 Query: 533 --GETLRFNPF-----ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL 585 G + N F +D + +R ++ M SP + LL AVR W Sbjct: 545 KPGSRIIINAFSTAGIDTENGLDSEVKFIRPIIARMVSPTAPITPFEGALLDVAVRIVWK 604 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 V D L + D E E+ V L+ + G YG Y N + Sbjct: 605 DYGQEGSPTLVRDALLSLKDQNGQPE-----RIAYELAVRLEPFCKGGVYGDYVNG-RTN 658 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + D ++V LEL L P L +M L + N MYR R+ KL + DEGW+++ Sbjct: 659 VSLDNEVVGLELEHLNSDPQLRTVIMLGLTNQVTNEMYRFDRSRPKLFLQDEGWQIVG-D 717 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + + +F+E+GYR AR++ G++ TQ I D +KA+ +AA+ NS++K LKQS Sbjct: 718 DQESADFMEEGYRRARKYEGSFFFATQGITDAGMNKAT---QAAFDNSAWKFHLKQSDDT 774 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSD 825 K + P + M+ ++ L+ + R D + AM ++ Sbjct: 775 LKKIEKGDVMDLSPGLKRMLKSLRPVPGRYSEFVLVDPNGGTHLLRHIPDEFTLAMATTK 834 Query: 826 GPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 GPD+EF+++ R G S +A+ L K Sbjct: 835 GPDYEFMERLRTSGTSTEDAIRALIQAK 862 >UniRef50_Q0F363 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F363_9PROT Length = 792 Score = 694 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 195/796 (24%), Positives = 339/796 (42%), Gaps = 43/796 (5%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPR 92 P+FS LPY + ++ N+ + GF++E +P GA+ + L +L P Sbjct: 17 ASHQAPRFSHWLPYLAADAADCVYENENSHGFVMECMPQVGADMEMARILTSLLTLGWPP 76 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKA---AATQFPLPEGM 149 + +H+ +S + + ++R + I R + + Sbjct: 77 DTGIQVHMYASPNIRSMLAGWASIRISETSDSQRASGIYRTLARRRVEYILSGARASLFN 136 Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV 209 + P +R +RVF+S P + S + + L + +A L GA + + A I + Sbjct: 137 SAPYLIRDFRVFVSVTLPG-RMSEENRARLIELRRGAKAVLAGAHLPAWDMSPSALITWL 195 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 EM+N Y + DP + Q + L V+ D++ + R + Sbjct: 196 AEMLNQE---DYDRDIAYDPGRLIRNQILNYGTTLDVKPDHILINGR-------TEVRMM 245 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 + PE LW M+ + L CPF+ TL + + D + A +K Sbjct: 246 SVKNYPEEFPLWGMSGLVGDFYQANLQYPCPFLFTLGVHLPDLESAKAGAQMKAARATHD 305 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 ++T AK+ P + ++W + L G S+V + + F ++ EQ Sbjct: 306 AETPMAKFLPDFALKKRDWDIVMHALAEGH-SMVQLYHQLVLFAPRG--RGVQAEQAARA 362 Query: 390 SFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN 449 R +E RF + L LP K ++ +K + N ++ PL+AD Sbjct: 363 VLRGKSWESCLDRFMQTQGLLAALPMTLSKEMWSDIKRMERYSTKTTGNAMHMAPLLADW 422 Query: 450 PLTPAG-LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 T L+ + R Q+ D+F NYN+AV SG+ K+ L+ + S L GG Sbjct: 423 KGTGTPTLMLYSRRGQVMHFDLFDNKEG--NYNVAVAAASGSEKSFLLNEITLSYLGIGG 480 Query: 509 FAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPN 565 + D+G Y+ LC + G +++ + NPF ++ D+D+ ++ L+ MA+ + Sbjct: 481 RVWIIDVGRSYEKLCRLLEGEFIEFAPDSNICINPFTHVRDLDEEMALLKPLLARMAAAS 540 Query: 566 GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVL 625 D++ +L +A+R SW ++ N + DV D+L D R ++ + Sbjct: 541 RETDDLENAMLEEAIRRSWESRGNTMTVTDVADWLAAQDD-----------DRARDLARM 589 Query: 626 LDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT 685 L YTA G Y +YF +L D + VVLEL L+ + L V+ ++ I+ MY Sbjct: 590 LLPYTARGMYARYFEG-RNTLDFDNRFVVLELEELKAKKDLQAVVLMIVMYQIQQAMYLG 648 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 R +K+ +IDE W L+ GEFIE GYR R++ GA+IT TQ+I D+ AS Sbjct: 649 ERGQRKICIIDEAWDLMS----GAGEFIETGYRRVRKYGGAFITATQSIGDYYKYDAS-- 702 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 AA+ NS + ++L+Q + + + + + M+ + + FS + Sbjct: 703 -LAAFENSDWLLLLRQKKESVEQLTESGRLKVDDSMKRMLMSLKTSHGE-FSEVFIYSAA 760 Query: 806 HSSWHRLFVDPLSRAM 821 RL VDP S + Sbjct: 761 GMGIGRLVVDPYSTLL 776 >UniRef50_C5ANL2 Putative uncharacterized protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANL2_BURGB Length = 866 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 203/857 (23%), Positives = 363/857 (42%), Gaps = 42/857 (4%) Query: 17 TALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANE 76 L P + + + Q LPY Y+ + L+ N +++GF+L P GAN+ Sbjct: 28 DDLGPPAPTVADQRRVDNVGLHQL---LPYDQYDPATELYYNTSSIGFVLVVAPQTGAND 84 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGL---REFSWSGEQAERFNAITRA 133 + L L +P + +++ ++ + ++ + R ++ SGE + Sbjct: 85 ELARTLLG-LYDTMPADHGVQWMMLADPIIEEHLDRYVDLRRTYANSGEAPPFYLEQAER 143 Query: 134 YYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGA 193 A Q P ++ R+ +S EM+NL +++ A+L+ A Sbjct: 144 RAAALRANQ-GRPLFHGQNYSITDKRLMLSVVRKGSADDAKVREEMQNLREVVGATLRSA 202 Query: 194 SITTQTVDAQAFIDIVGEMINHNP---DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 S+ ++T I + ++N + +Q D + Q V +V+A++ Sbjct: 203 SLASRTATPDDLIRFLWPILNPEYLFGNGAEVVDQQYDSDRPIRDQLVPFGHHARVKAEH 262 Query: 251 LTLGLRENGR---NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTL 307 L GL + + +F + + P LW M + +L N CP+++TL + Sbjct: 263 LLFGLPPEEKGDPDKRIAARSFGVLQYPSKKELWEMGNIVGSLFNDVHQYPCPYLITLGV 322 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFL 367 + DQ + A L+ + +K+ A P + + ++W + +L SG S+ + Sbjct: 323 MTLDQNAVETRAALRGARAAQNAKSKMAPLQPELALQDRDWRAVGLQLESG-GSICELYH 381 Query: 368 NITAFCK-DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 +T F D E + + I S R F +++ + L+ +P L L Sbjct: 382 TLTLFAPRDGIERCVAAARGIWRSERFKLFPMVT---QQLTTLLSAMPMALTPDLRDDLN 438 Query: 427 EAGVVQRAESFNVANLMPLVADNPLTP--AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 + ++ + N ++ P+VA+ T LL R A ID++ TNYN V Sbjct: 439 KLRLISTKTTVNATDMAPVVAEWGGTRGAPSLLFYGRRGTPALIDLYSSP---TNYNGFV 495 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNP- 540 GT+GAGK+ L+ +I + GG V D+G Y+ GG Y+D + + NP Sbjct: 496 DGTTGAGKSVLMNEIIAAFRSVGGIVRVCDVGYSYEKQISLAGGQYIDFKPNSGIVINPF 555 Query: 541 ----FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDV 596 F IDQ + +R ++ M SP +++ LL AVR W V Sbjct: 556 SSAGFDPENGIDQEVKFIRPIIARMVSPTAPIEQFEGALLDLAVRQVWQDYGRDGSPTLV 615 Query: 597 VDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLE 656 L + D + E E+ V L + G YG+Y N ++R D +++ LE Sbjct: 616 SKALLSLKDQNKRPE-----RVAYELSVRLGPFCDGGVYGRYVNGP-TNVRLDNEIIGLE 669 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 L L P L ++ L + N MYR R+ KKL + DEGW+++ + + EF+E+G Sbjct: 670 LEHLNSDPDLRTVILLGLTNQVTNEMYRFDRSRKKLFLTDEGWQVVG-DDKETAEFMEEG 728 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 YR AR++ G++ TQ I D K + A +AA+ S++K + Q K + Sbjct: 729 YRRARKYEGSFFFGTQGIGD---TKLNRAIQAAFDFSAWKFHMAQGKDAIPKIEREKSID 785 Query: 777 FLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKR 836 P + M+ ++ L+ R + + AM ++ GPD+ F+Q+ Sbjct: 786 LSPSLKKMLSSLAPYPGRYSEFVLVDPNGDEHLLRHIPEEFTLAMATTKGPDYNFMQRLI 845 Query: 837 KEGLSIHEAVWQLAWKK 853 ++G+S +A+ L K Sbjct: 846 QQGVSTEDAIRSLIEHK 862 >UniRef50_D0SGY4 Type IV secretory pathway protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY4_ACIJO Length = 869 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 207/860 (24%), Positives = 369/860 (42%), Gaps = 42/860 (4%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIV 79 K P +N++L Q + Y ++ E+GLF N+ T+GF E IP GAN+ +V Sbjct: 26 KRPSPVKLSNKILESYGMHQ---VFKYDMFDPETGLFFNEGTIGFCFEVIPQTGANDEMV 82 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGL--REFSWSGEQAERFNAITRAYYMK 137 L M T +P + I + + I+ R+ + + F + Sbjct: 83 NRLLTMF-TPIPADTGIQIQTFGNTVFDGMIDRYYQIRQAAQEQGDIDSFGIDLAKKRIA 141 Query: 138 AAATQFPLPE-GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT 196 + P G +++ + IS +++ +I M NL + SL+ A + Sbjct: 142 YFERKIGEPLYGSQSNYSIKKPTMVISVTREGNLENQKEIDLMTNLRHSMLNSLKQAELA 201 Query: 197 TQTVDAQAFIDIVGEMINHN--PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 +DA A I + ++N + + D + Q + +VR + G Sbjct: 202 AFHMDAHALITHLTIILNPEILFSNERLPIIEYDENKRVKEQITKIGHMAEVRRKSVVFG 261 Query: 255 L--RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 +N ++ + ++ + R P+ LW M++ + + L CP+I+T + D Sbjct: 262 AVPEKNEKDERVAMRSYGVMRYPKRKQLWEMSEVVGAMFDDSLQYPCPYIITCGIYTLDA 321 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 +T + A +K+ ++ S++S AK+ P + ++W + +G ++ + IT Sbjct: 322 NQTETMARVKHARAKQNSQSSMAKFQPEYGEIEQDWESVVFHTSNG-GAMCEMYHIITLI 380 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 + + Q +N + N F +I+ F + P K LK+ V+ Sbjct: 381 APVDKIDSY--SQTAINIWSSNKFNIIALDFLQLAALYVSCPMTLNKSTRDDLKKLKVMT 438 Query: 433 RAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 + N ++ PL+ + ++ + FID + + NYN+ VCG SGAG Sbjct: 439 TKTTINAIDMSPLIGEWQGVGDPVVMLFGRKGTPCFIDFY--ANTDGNYNLYVCGVSGAG 496 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDID 548 K+ L+ ++ + G + D+G +K+ + G D G +L NP++ I + Sbjct: 497 KSVLLLEILAAYRAVGAKLFILDVGRSFKNFVDLAKGTTFDFNSGRSLCMNPWSWIQVAE 556 Query: 549 QSAE-----------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 + E + + MASP +L++ E LL +A+ A+W N +D+V Sbjct: 557 EEEEGGLNTFQQELRMLLPIYAKMASPKNSLNQFQEALLEEALSATWREYGNENNVDNVQ 616 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 +L D + E+ L +T NG YG YFN + ++ D ++ LEL Sbjct: 617 AYLLQIKDQGG----QQVDRVAFELGKQLQAFTTNGMYGSYFNG-KANISFDNDVIYLEL 671 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 L+D P+L VMF + I MY T R+ KKL IDE W+LL + + +FIE+GY Sbjct: 672 EELKDAPALRSVVMFCVTSRIMKEMYLT-RDRKKLCFIDEAWQLLG-DDAETAKFIEEGY 729 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 R AR++ G + TQ I D ++AS RAA+ N+ +KI L+Q K F + F Sbjct: 730 RRARKYNGIFGIGTQGIDDAFKNEAS---RAAYTNADWKIFLRQDEKNFQELIDSKKVSF 786 Query: 778 LPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRK 837 P + +I ++ ++ R D S AM S++ D+ + K Sbjct: 787 SPYMQRLIKSLRKING-MYAEMIISSPRGEHLLRHIPDEFSLAMASTNAKDYTRLDNLMK 845 Query: 838 EGLSIHEAVWQLAWKKSGPE 857 G + +A+ QL +K + Sbjct: 846 GGYTTIQAIEQLLKEKEQEK 865 >UniRef50_D1RMN8 Type-IV secretion system protein TraC n=2 Tax=Legionella RepID=D1RMN8_LEGLO Length = 858 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 267/849 (31%), Positives = 422/849 (49%), Gaps = 25/849 (2%) Query: 13 NSLVTALKLPDESAKANEV-LGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPI 71 NS+ L +ES+ N + +G+ +P F + LPY+ Y++ES LF+N G + P+ Sbjct: 14 NSIDDYLVDGEESSSQNTLNVGDHQYPLFCKELPYQYYDEESHLFINRWNTGLLYRITPL 73 Query: 72 NGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREF-SWSGEQAERFNAI 130 GANE I E LD +LRTK+ L + L+ VG ++ ++F + EQ Sbjct: 74 TGANEKIAEQLDSILRTKVSDEFTLQLILVKHNQVGHELDAFSKQFMNRDFEQLSVMGKS 133 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEM-ENLVKIIRAS 189 R++Y +AA F +N +T V + K K+ ++ AS Sbjct: 134 LRSFYGEAAVHGFKTNTNVNPRITQTECYVVVD---KIKGKNEEEVKACFAQFRIAFEAS 190 Query: 190 LQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 L A I +T +A+ + ++ + H PD++YPK DP + +Q V FD++V + Sbjct: 191 LMSAKIGFRTCNAEELLRLLHFYLAHEPDNIYPKISCYDPKKLIQHQVVGRDFDVEVAKE 250 Query: 250 YLTL-GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLV 308 L G+ G+ + P LW+ +N +N+ NPE SI C I+++T + Sbjct: 251 GLLFKGVNSQGKAFETVASVMTIDGLPGEYHLWDNINNSANIFNPEQSIPCNHIISVTYL 310 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 V++Q K AN K DL+KK+K YA EK+A+EW R L SG++ N Sbjct: 311 VDEQNKAQGRANRKTSDLDKKAKGDYALHVAGTEKKAREWRHFRDDLASGKTRSCKMLYN 370 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 + F + E A +VE F NG +L R FL LPF+ L K + Sbjct: 371 VVLFSR-RAEYARDVEA-ARTCFSYNGIKLALSRRMQTPYFLATLPFLFTNHLQKGFQLP 428 Query: 429 GVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 ++ S+N MPL++D T +G+L PT RNQ + ID F + TNYN++V GTS Sbjct: 429 TMMWPISSWNATQYMPLLSDWSGTGSGILLPTLRNQFSCIDPFSGKLG-TNYNISVTGTS 487 Query: 489 GAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDID 548 G GK+ IQ L+ +VL +GG + D+G YK LC +GGVYL+ L NPF ++T+I Sbjct: 488 GGGKSFFIQMLMLNVLFNGGDLFIVDVGGSYKKLCHALGGVYLEYSNLAMNPFTHLTNIG 547 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNA--SDS 606 + + + ++A + G L +A+ ++ + ID V L +D Sbjct: 548 KEIQHILSLFQLLACAKDGASDDDRGTLREAILQAFSEHQQTTLIDHVQSKLLELHQNDR 607 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 E+Y + LD Y + +G FN+ L DA+++V++L +ED + Sbjct: 608 EKYPTGKI-------LAKNLDPYCTHSEHGTVFNAP-SKLAPDARIIVVDLKEIEDDEHI 659 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 V+ S++ + RM+ + R+ +K+ +IDE W L + FI +G+RT RRH + Sbjct: 660 RAPVLLSILSQFQGRMFNSDRSRQKMCIIDEAWSLFSG-DQIAVNFINRGFRTGRRHNAS 718 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIG 786 ++TITQ I D+ + ARAAW NS+ K+I Q AK+ Q + + F + ++ Sbjct: 719 FVTITQGIDDYYAF---PEARAAWENSAIKLIFLQDGDSLAKHQQEH-NTFSDFEFKLLS 774 Query: 787 KFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 F AKD FS L++ + SS+HRLFVDP ++ + SSDG D++ V ++G S A Sbjct: 775 GFPKAKDAGFSQVLVRADGISSFHRLFVDPFTKVLLSSDGRDYQAVMNYIEQGYSYIHAA 834 Query: 847 WQLAWKKSG 855 +A K Sbjct: 835 MLVANKHYD 843 >UniRef50_A3VN21 TraC n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN21_9PROT Length = 857 Score = 667 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 216/867 (24%), Positives = 365/867 (42%), Gaps = 59/867 (6%) Query: 21 LPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVE 80 L E + + V E S + S +LPYR +++E L++N + G++LE +P GA+E++V Sbjct: 16 LTGEGSLFDGVRRETSLDRLSEMLPYRLWDEEKALYLNAASTGWILEVVPFLGADETVVS 75 Query: 81 ALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAA 140 L M +P L I +S +G ++ + A+ R +++ A Sbjct: 76 VLAEMFSDGIPDNAYLQILNWASPRIGPVLDSWATARGGEAGVFKTL-ALHRVDHLRRGA 134 Query: 141 TQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTV 200 + + P R +RVF++ S ++E L + +L+ + ++ V Sbjct: 135 FR---SLSAHAPFLARQFRVFVALGVEG-DASPEVRHQLEGLRSNVAQALKSLGVASRPV 190 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR---- 256 I + E++N ++ DP L+ Q V L+V AD L Sbjct: 191 APDGLIRFLDEVLNPQF-AVTRASAGYDPAELLDRQIVRPDTSLRVEADRLLFETIAPAD 249 Query: 257 ------------ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 E+ R + F + PE MA + LN +L + CP + Sbjct: 250 RSPFEAPGTTQLEDYRTGRFDVRAFSARKFPERFDQGGMALAIGHPLNDQLRLPCPVLSC 309 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVS 364 L + + ++ A K+ E+++ T+ ++ P ++ +A +W +R+R+ G V + Sbjct: 310 LAIAFGSKESSNDLAAAKFGRAEQQAATNMVRFLPELKDKADDWKWVRERVRDGARLVRA 369 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 I A E+ + + +R G+EL RF + CLP GL Sbjct: 370 GSFLIMVAP---EGEAEAAERAVRSLYRGMGWELAKDRFVATQTLGACLPLTLADGLGAD 426 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMA 483 L++ ++ + + PL + + L+ R Q F F N+N+A Sbjct: 427 LQKLRRLRFMVTDTCVQIAPLQGEYLGMSTPDLMLLGRRGQPFFWSPF-GNQGAGNHNVA 485 Query: 484 VCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNP 540 + G+SG+GK+ L+Q L+ + +G V D G+ +K +CE +GG ++ + NP Sbjct: 486 IIGSSGSGKSVLMQELVTGLRGAGTNVTVIDDGESFKHMCEALGGRHVKFTLEADVCLNP 545 Query: 541 FANITDIDQSAE---------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRA 591 F+ + + + VR + MA GL+ AV W A+ A Sbjct: 546 FSLLDERKAKEDGDYATESLTLVRAMIEQMAKGEERATAEERGLIDSAVAEVWKARGILA 605 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 IDDV LK + ++ L YT G YG +FN E SL D Sbjct: 606 GIDDVAAALKEQG------------AEGVKLANALRPYTTAGLYGPFFNG-EASLVIDNP 652 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 + V E+ LE +P L VM +L+ I RM R K VIDE W LL GE Sbjct: 653 LAVFEMKDLEAKPELRAVVMLALMFLINQRM-MADRREKMALVIDEAWALLGR--GAAGE 709 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 FI R R++ GA IT TQ I D+ + A+AA+ NS + I+LK + A + Sbjct: 710 FIAGFARRCRKYGGAIITGTQGIDDYYRTEG---AKAAFENSDWCIVLKLKPEAIALVLK 766 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 D+I + + +S L+ + RL +DP S ++SSD F Sbjct: 767 SERLSIDAHTADIIRSLSVSAGE-YSEMLIMGPHGRHVGRLVLDPFSATLFSSDARTFAE 825 Query: 832 VQQKRKEGLSIHEAVWQLAWKKSGPEM 858 ++ +GL++ EAV ++A++ E+ Sbjct: 826 IEALEAQGLTVAEAVERVAFRHQDKEV 852 >UniRef50_A8QYQ2 TraC protein n=2 Tax=Legionellaceae RepID=A8QYQ2_9GAMM Length = 865 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 253/839 (30%), Positives = 421/839 (50%), Gaps = 34/839 (4%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 M P LLPY N E+G F+N +MGF L+ P++GA+ES++ +L + + KL Sbjct: 46 MDLPSIKGLLPYETVN-EAGFFVNRNSMGFGLQLSPMSGADESLMNSLAQLFKNKLTVDT 104 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + + + R+ G ++ Y++ A + G N+P Sbjct: 105 DCTVLMYKHPWLEGRLSQNYEPILKQGGIYADLARLSLKYHLNAIKKGYKN--GRNVPAG 162 Query: 155 LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMIN 214 L Y ++ C P + + ++ L + L+ + + +DA F ++ +I+ Sbjct: 163 LSDYCCYLFICRPMQSDVK---EQLHLLQADFESELKVSGFGFRRLDADDFKVLMRALIS 219 Query: 215 HNPDSL-YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE-NGRNSTARILNFHLA 272 + ++L +P + + S +++ + + + + + G R++N ++ Sbjct: 220 PDFNTLSWPVINE--SNGLIAESIPTPSTVIEIEDEAIEVSIADLKGETQRTRVVNCEVS 277 Query: 273 RNPEI-AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 P LW D ++NLL+ E I CPF+++ T+ +Q K ++A + L + Sbjct: 278 SYPSKPFALWQTPDLFANLLDTEQGIQCPFLISFTIRGVNQEKMKAKAKARAKSLSSNNN 337 Query: 332 TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 + PS+ +E EW + G+ ++ F N+ + ++ E E + SF Sbjct: 338 AVQSFINPSIREETAEWHFVHDHASKGELYLLPTFYNVVLYTTESKER--EHVAKAIASF 395 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL 451 R GF L R FL LPF+ +GLF L+ G+ ++ FNVANL+P+VAD Sbjct: 396 RHLGFTLTQSRCKQWLRFLGSLPFILTEGLFSSLELLGMTKKLSHFNVANLLPVVADFKG 455 Query: 452 TPAGLLAPTYRNQLAFIDIFF-RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 GL+ PTYR+QL +++ F R + TN+N ++GAGK+ Q I L G Sbjct: 456 AGQGLIVPTYRHQLFYLNTFDDRALPITNFNRLTVASTGAGKSFFEQAQILDGLSRGQQI 515 Query: 511 VVFDMGDGYKSLCENMGGVYLDGETLRFNPFAN-----ITDIDQSA----ERVRDQLSVM 561 V D+G YK LC+ +GG Y+D TL NPF +T+I+ A ++R+ L++M Sbjct: 516 FVIDLGGSYKHLCKMVGGSYIDASTLALNPFTLFDFDGVTEINGQALNDSIQIRNLLAIM 575 Query: 562 ASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDE 621 ASP+ L EV + LL AV W RA++DDV+ L+ S+ Q+ RL + Sbjct: 576 ASPHEALGEVQKAWLLDAVTECWKVHGRRAKMDDVLSALQRMSERPQFQG----DQRLKD 631 Query: 622 MIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENR 681 + VLL +Y + G YG FNSD P L + + VVLE+G LE P LL VMF +I+ I+ + Sbjct: 632 LTVLLGKYGSQGIYGHLFNSDTP-LLNSSDFVVLEMGELESNPELLTIVMFVMIVIIQGQ 690 Query: 682 MYRTPRNLKKLNVIDEGWRLLD-FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 Y + R +K +IDE WR L N FIE+G+RTAR+H G + ITQN++D Sbjct: 691 FYHSDRKREKRCIIDEAWRFLARGSNPVCASFIEQGFRTARKHRGGFAVITQNLLD---T 747 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 + RA +S KI+++Q + +Y +P F PL+ +I FG AK Q FS+ + Sbjct: 748 MNTLQGRAIAASSDTKIMMRQGS--LKQYMDEHPKHFSPLEARVIESFGEAKTQGFSNLM 805 Query: 801 LQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMA 859 +Q N +++HR F DP SR ++S+ G + ++ +G+++ +A+ ++A K G E+ Sbjct: 806 IQFGNVTTFHRYFCDPFSRVLFSTSGEEVSDIESLTNQGVTLTDAIQRVAQKYYGEELC 864 >UniRef50_B6ESX9 Conjugative transfer protein TraC n=14 Tax=Vibrionales RepID=B6ESX9_ALISL Length = 843 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 240/849 (28%), Positives = 394/849 (46%), Gaps = 46/849 (5%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPL-- 96 LPYR ++ E LF N T++GF + + GAN+S +EAL+ +L T LP+G Sbjct: 16 HLHHQLPYRFFDDEHTLFHNTTSIGFGFQLNVLGGANDSAIEALNKILTT-LPQGKQWDY 74 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 L S+ V IE S G R R Y A+ + F + + L Sbjct: 75 QFTLTSNHQVSHLIEQNTALMSKRGGICARLANNERTYADFASTSGFLHRQKHHFTLREH 134 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN 216 H +F+S S DI ++ + + SL +T + I V +N N Sbjct: 135 HSFLFVSTTSR-------DIDKINDTKATLYTSLTQLGLTLTPIGVPELISYVDGHLNFN 187 Query: 217 PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN-GRNSTARILNFHLARNP 275 + P++ + + L+ Q + + V ++ +N T+R++NF L R P Sbjct: 188 ANKTRPEKATYNEHEPLHTQMLSPDSEFLVSRGHVDSRHTDNKHGEQTSRVINFGLLRLP 247 Query: 276 EIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYA 335 L+ + + +S+L N SI+CPF ++ +ED K ++ + L K + Sbjct: 248 SDFRLYALPECFSSLKNVAQSINCPFTCSVQFQIEDNGKATADNDGHISALMKTVGSKMQ 307 Query: 336 KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG 395 P+ + E E +++ L S + ++VS +N++ F + E + Q +++F G Sbjct: 308 VLVPTAKDELAERKQIQLGLLSKEFTMVSMVMNLSLFS--SKEKQRDDSQAAVSAFSSGG 365 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG 455 ++ +L+ LPFM +G +K K AG ++ +S N N P++ DN G Sbjct: 366 IDIAPLNMLQGHAYLSSLPFMMSEGFWKDSKRAGRIRTMKSSNAVNFFPIIHDNKNFSGG 425 Query: 456 LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM 515 +L PT R Q++F D F G + NYN+A+ G SGAGK+ +Q L +SV G + D Sbjct: 426 MLLPTMRQQISFFDPFNCGSD--NYNIALTGGSGAGKSFFVQLLAKSVYSKFGKVWILDK 483 Query: 516 GDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAE-----------------RVRDQL 558 G YK L + G Y+ + + NPF ++ I +E + Sbjct: 484 GASYKKLTLMLEGTYMTSKEIFLNPFTHLGKIKAKSEHEASVDDELNPLAEVLDNITALF 543 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 + MASP LD +L A+ +W K R+DDV L S R Sbjct: 544 ATMASPREELDPFQTAVLGDAILNAWNDKGPLTRVDDVQAALFAIS------TESDNDRR 597 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + ++ L++Y +N YG FN L + + LEL G + ++L +F+L++ I Sbjct: 598 ISDIATQLNKYCSNNVYGDTFNKPSM-LNPNIHITTLELDGFPE--AVLRPAIFALMVSI 654 Query: 679 ENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 +MY T R+ KL +I+E W LL N + EFI GYRTAR+ G++ T+TQ I DF Sbjct: 655 NQQMYLTGSRSTPKLCIIEEAWSLLSGANAQAREFINTGYRTARKFGGSFCTVTQGITDF 714 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 ++ + A A + NS I L+Q + F + Q PD F P ++ ++ F + +S Sbjct: 715 FAN---AEAMACYNNSDIHITLRQG-EGFTSFLQDNPDTFSPYEQQVVKGFEKSGVAGYS 770 Query: 798 SFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPE 857 +++ H+S+HRLF DP +RA S++ +FEF + G + +A+ Q A G E Sbjct: 771 CAMIKAGGHASFHRLFTDPFTRACLSTEPNEFEFCETLMSNGTELMDAIEQTAEHFYGDE 830 Query: 858 MASLEAWLE 866 M +A L+ Sbjct: 831 MQKFDAMLQ 839 >UniRef50_A4XE86 Type IV secretion/conjugal transfer ATPase, VirB4 family n=10 Tax=Sphingomonadales RepID=A4XE86_NOVAD Length = 868 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 199/860 (23%), Positives = 358/860 (41%), Gaps = 61/860 (7%) Query: 23 DESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEAL 82 ESA + P S LPYR Y+++ GLF+N ++GF+LE P+ GA+E E L Sbjct: 16 GESAHPEAERPVLGAPMLSNWLPYRSYDKKHGLFINTDSLGFILELAPMMGADERSGELL 75 Query: 83 DHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 L +P G + + S VG+RI + + R A+ RA +++ AA Sbjct: 76 TQFLSDAVPSGCEIQLIHWQSPSVGERIADWVMPRVVAKGVYGR-AAMHRARWLRRAAW- 133 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA 202 + + P LR+ RV +S + AD + ++ + +LQ SI + + Sbjct: 134 --MSISRDAPFYLRNTRVILSVGARLSGPIGADT--LASVRDSLHGTLQSLSIPARDMGP 189 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL--------G 254 I + + + D+ +N QCV + +V D + L G Sbjct: 190 VELIAFLDDFLCPAVDNADKPE-HYSELDPINVQCVRRDLETQVTPDRIVLQTERFRPTG 248 Query: 255 LRENGRNSTARILN-------FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTL 307 R++G ++ F + P+ W++ +++N +L C + L L Sbjct: 249 ERQDGAPVIGEVVPDKFDWRFFSVRNLPKQWAPWDVQKIIGDVINDKLRFGCNVMTVLGL 308 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFL 367 V +D+ S A LK M + + A++ P + ++ EW ++ + G + + Sbjct: 309 VYQDEEAVASRAGLKVMRTTSLADSRSARFLPQLSEQRDEWQYVQAEIRQG-RKLAQVYY 367 Query: 368 NITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 + A E + + + ++ G++LI R+ + L +P GL LK Sbjct: 368 GVGALSPLGKGDINE--RMVKSVYKACGWDLIDERYLQVMGLLAAMPLSLPNGLSADLKR 425 Query: 428 AGVVQRAESFNVANLMPLVADN-PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 + + A++ PL ++ +L R Q F F N+N+AV G Sbjct: 426 MKRFKTMLTTTAASIAPLQGEHTGGHIPHVLLIGRRGQPFFWSPFQNAAG--NHNVAVFG 483 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN 543 SG+GK+ +Q + ++ +G +V D G ++ + + GG +++ NPF Sbjct: 484 KSGSGKSVFLQDVCAAMSGAGAKVIVIDDGRSFEHMVKAFGGAFVEFKLSSGFSLNPFDM 543 Query: 544 I------TDIDQSA------ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRA 591 I +D D ++ + MA L + GL+ AV W K+ Sbjct: 544 IDGEALASDEDGEDYEVECLAMLKSIVGQMARQQDRLSDTERGLIDSAVSTVWREKQRHG 603 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 IDDV L+ ++ + + GTYG++F S+ A Sbjct: 604 TIDDVAAALRALP-----------SPYAGDLADAMSPFLKGGTYGRFFEG-ACSIDLSAG 651 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 + V EL L +P L + +L+ M R++ KL +IDE W+LL ++G+ Sbjct: 652 LTVFELSDLSSKPELRSVALTALMFLTLRVMRDLDRSVPKLTMIDEAWQLLGG--GQMGQ 709 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 IE RT R++ G+ IT TQ++ DF + S AA NS + I+L+Q + + Sbjct: 710 AIETYARTCRKYGGSLITATQSLNDFYKSEGS---LAALENSDWSIVLQQKEETINDLAK 766 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 + ++ +S L++ + RL +DP S +YSS F Sbjct: 767 HQRFEMDHYTESLLRSLKR-NGTEYSDVLIKGPETLAVGRLVLDPYSATLYSSSPRVFSE 825 Query: 832 VQQKRKEGLSIHEAVWQLAW 851 ++ K + GL++ +A+ ++A+ Sbjct: 826 IEDKVRGGLALPDAIERVAF 845 >UniRef50_B8EFP1 Type-IV secretion system protein TraC n=6 Tax=Shewanella baltica RepID=B8EFP1_SHEB2 Length = 862 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 216/865 (24%), Positives = 381/865 (44%), Gaps = 52/865 (6%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPL-- 96 LPYR Y+ +F N T+GF GAN+ +++ ++ ++ T LP G Sbjct: 22 HLHHELPYRIYDDAEQVFENANTLGFGFAISLFGGANDDLIKTMNALVCT-LPEGDKWHY 80 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 ++ + VG+ IE ++F Y ++ F L+ Sbjct: 81 QFVMVGNNQVGELIEQNQALLKGRNAICDKFANNEAIYAKHSSTKGFGTKLSSAYHYDLK 140 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN 216 + + F + D+ + ++ + + L + + + A I+ E +N + Sbjct: 141 NTKGFFFVS------TTEDMPALLDMRLGVESELAQTGMHIRRLGADDLIEHCREHLNFS 194 Query: 217 PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR--ENGRNSTARILNFHLARN 274 + + Y LN Q + + + D + + ++ + ++N L Sbjct: 195 HQQDRVTPAKYNEYQPLNTQILSPDSEFIINRDSVNIRHTPMQSDNSVDTTLINLGLKGL 254 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 P L+ + ++L S+ CP+ ++++ + + + + K L K + Sbjct: 255 PNDFRLYAFPNCIASLSYTMNSVQCPYRVSVSFYINKTGEQTTRNDSKIGSLTKTVNSPM 314 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 PS E E E+++ L S + + LN+T + + E + +FR Sbjct: 315 RLLIPSAADELAERKEIQKGLSSHAFKITTMTLNVTLYTTE--EKHRHDTSKAIATFRTA 372 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 G +LI L+ LPF +G K ++AG+ ++ N+ N +P+VAD A Sbjct: 373 GIDLIRNNKLQGMCTLSTLPFSMSEGFMKDSQKAGLCFMMKTSNLVNFLPIVADYKRLSA 432 Query: 455 GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD 514 GLL PT R+Q+++ D F G + NYNMA+ G SGAGK+ +Q L++S+ GG A + D Sbjct: 433 GLLLPTMRHQISYFDPFNCGSD--NYNMAITGGSGAGKSFFMQALVKSIFAKGGKAWILD 490 Query: 515 MGDGYKSLCENMGGVYLDGETLRFNPFANITD-----------------------IDQSA 551 G YK L + +GGVYLD + NPF ++ I + Sbjct: 491 KGQSYKKLTQTLGGVYLDSSQIFLNPFTHLGKVLSVRDAGTFGPILDDEGQAIDPITEVL 550 Query: 552 ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE 611 + ++ MASP+ L LL A+ +W N IDDV L + A Sbjct: 551 GNITALIATMASPDEKLTGFQTALLGDAILLAWQKCGNDTLIDDVQKALYDI------AA 604 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 +R+ ++ L+++ ++G +G FN L + + LEL G + L V+ Sbjct: 605 QKNDDTRISDIAAQLNKFCSSGIHGAIFNKPSM-LDPNIDITTLELDGFKG--ELQRPVI 661 Query: 672 FSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 F+L++ I +MY + R++ K+ VI+E W L+ N + +FI +GYRT R+ G++ T+ Sbjct: 662 FALMVTISQQMYLSGQRSIPKICVIEEAWSLMSGANAQSKDFINEGYRTVRKFGGSFATV 721 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 TQ + DF ++ + AA +S I L+Q F + +PD F P ++ MI F Sbjct: 722 TQGMNDFFANAEAEAAL---NSSDIHITLRQG-DGFGDFLNKHPDHFSPFEQHMIKSFPR 777 Query: 791 AKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLA 850 A D S +L+ S+HR+F DP SRAM S++ +FE + K G+ + +A+ A Sbjct: 778 ANDAGHSCVMLKAGGLVSFHRIFADPWSRAMLSTEPKEFEHCENLIKGGMPLLDAIELTA 837 Query: 851 WKKSGPEMASLEAWLEEHEKYRSVA 875 +MA +A L ++ A Sbjct: 838 QHFYPDDMARFDAILSAAATHKEAA 862 >UniRef50_C5T9V4 Type-IV secretion system protein TraC n=5 Tax=Betaproteobacteria RepID=C5T9V4_ACIDE Length = 860 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 197/851 (23%), Positives = 338/851 (39%), Gaps = 49/851 (5%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPR 92 + QF+ LPY Y + +F+N MGFMLE +P +GA+E + E L L P Sbjct: 25 ADTPAEQFAGWLPYSAYLADEKIFVNRDGMGFMLEVMPQSGADERMAEVLVS-LYANCPP 83 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITR------------AYYMKAAA 140 L HL +S + ++ +QAE+ R ++ Sbjct: 84 DTGLQFHLFASPHIRHQLRQYTNLRVEDEDQAEKARPFGRPVPNENLFRKLARQRVQHLL 143 Query: 141 TQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTV 200 TLR +R+ +S P + L + A+L+ A + + Sbjct: 144 HGTQASLTAGFHYTLRDFRLMLSVAFPGSAADLNRREALLALRDSMAATLRSAMLPNRVC 203 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRRQ-----------LDPYSDLNYQCVEDSFDLKVRAD 249 DA I+ + NPD + + D ++ Q V+ Sbjct: 204 DAADLINWCA--LFTNPDRIAHSDAEDLNYDDDRWLRYDDGREIRDQIVDFDTIQDPHPS 261 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 +TL + AR + + PE LW M +L+ P L S PF++TL + V Sbjct: 262 GITLWKETSAEVLEARF--YSIKSFPERFALWQMGSLIGDLMQPALQYSAPFLITLGVHV 319 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 D T S ++ + +K+ A P V K+ +W + +G S+VS + + Sbjct: 320 LDPNATKSIITANHVRATQNAKSKMADVMPDVRKKLDDWSAAANAIDTG-GSLVSLYHQL 378 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 F + + + + +R GF+L + + H + L LP K L + Sbjct: 379 AIFTPPDKAASAHEAANAI--WRARGFQLNADAYMHRQALLASLPMTLTPRFHKDLAKMR 436 Query: 430 VVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 V R N ++ PL+A+ T L+ R Q+ +D+F + NYN A+ G Sbjct: 437 RVTRKTMANAIHMAPLIAEWRGTRTPALVFGGRRGQVMTLDLFDNDLG--NYNFAIIGAP 494 Query: 489 GAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANIT 545 G+GK+ L+ L S G + D+G ++ LC G Y++ + NPF + Sbjct: 495 GSGKSVLMNELAWSYRAIGAKVWMLDLGRSFEKLCRKAQGTYIEFRPDVDICLNPFTIVH 554 Query: 546 DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 DI++ + + +S M S LDEV + V W A N I + D K + Sbjct: 555 DINEDIDMLVPGISKMCSMQHTLDEVQYKAISAMVLKLWRAHGNDLTITGLRDAFKTGTI 614 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS 665 E R+ ++ ++L+ Y G Y ++F ++ +V+E L+ RP Sbjct: 615 EELGVSG---DQRIKDLAIMLNPYARGGQYERFFEG-RANVDFSNDFIVIENEELKRRPD 670 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF---KNHKVGEFIEKGYRTARR 722 L V L+ I MY T RN +K+ IDE + L + +E+ R AR+ Sbjct: 671 LHAVVNILLLHQITGEMYLT-RNRRKVLFIDELKQQLGDIGADDPIKAAVVEEAARRARK 729 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 + GA T TQ+ D+ S+ AA+ S + +L+Q + ++ ++ Sbjct: 730 YGGALGTATQSADDYYG---SAQMEAAFNCSDWVFLLRQKPESIEMLDRKGRLAMDEPKK 786 Query: 783 DMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI 842 ++ FS + R +DP + ++S+ D + R +GLSI Sbjct: 787 RLLNSLRTEAGA-FSELYISSPVGEGVARNILDPATHLLFSNKLEDNAPIDALRAQGLSI 845 Query: 843 HEAVWQLAWKK 853 EA+ +L ++ Sbjct: 846 DEAIAELLRQR 856 >UniRef50_B2I3Z2 Type IV secretory pathway, VirB4 component n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Z2_ACIBC Length = 908 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 203/900 (22%), Positives = 366/900 (40%), Gaps = 82/900 (9%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT-TMGFMLEAIPINGANESI 78 K N++L Q + Y +N + L+ ND ++ F LE IP G+NE Sbjct: 30 KKFSTVDLTNKILESYGMYQ---IFKYNMFNVKRSLYYNDGPSVSFALEIIPQTGSNEDF 86 Query: 79 VEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGL--REFSWSGEQAERFNAITRAYYM 136 V + ++ + P + I + + D ++ L R + + F + Sbjct: 87 VSRIVSIISS-FPAETGIQILNFGNTIFEDDLQEYLDLRVAEYQNGKVSDFAIEFAKNRI 145 Query: 137 KAAATQFPLPE-GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 K ++ P+ G + ++ ++ +S K I +ME L+ A LQ A + Sbjct: 146 KHIQSRKGRPQFGRDSYYVIKKPKIILSVTRSGSYKDPQLIKQMEELLHQTSAQLQQAKL 205 Query: 196 TTQTVDAQAFIDIVGEMINHN-------PDSLYPKRR-----QLDPYSDLNYQCVEDSFD 243 + + I+ M++ P+ + R + + Q Sbjct: 206 PNIVLTPMLLLKIIKPMLDPESLFRTVPPEHEFQVSRSYYSEDYNRLESIKSQLTPRGHS 265 Query: 244 LKVRADYLTLGLRENGRNS--------------------------TARILNFHLARNPEI 277 V + G + F + R P+ Sbjct: 266 ATVGVSEIVFGQPIIDKTKGTNRSVRVYDSEWIEEDDDEDLEEDNRIAFRGFGVMRYPKF 325 Query: 278 AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKW 337 L+ M + + L CP+I+++ + + D+ + ++A +K + +++ AKW Sbjct: 326 KHLYEMGNVIGDFFENSLQYPCPYIISMGIHILDKTSSETKARIKQARSTQNAESKMAKW 385 Query: 338 FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFE 397 P + A++W + L G + + I F + + D N ++ NGF Sbjct: 386 QPEYAEIARDWNAITYHLHKGGG-MCELYHTIGIFAPRSQLDSYSANVD--NLWKSNGFS 442 Query: 398 LISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGL 456 ++ + + +P + K LK+ ++ + N ++MP++++ + Sbjct: 443 VMPLSCLQLPLLYSSMPMILTKKARDDLKKLKLITTKTTINAVDMMPILSEWQGFGKPVI 502 Query: 457 LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 + R F D+F NYN +CGTSGAGK+ ++ + G + D+G Sbjct: 503 MVFGRRGTPCFFDLF--SNKQGNYNFYICGTSGAGKSVFSLEILAAYKSLGFKIYIIDVG 560 Query: 517 DGYKSLCENMGGVYLD---GETLRFNPFANITDID---------------QSAERVRDQL 558 +K+ G +D E + NPF + I+ Q + + Sbjct: 561 RSFKNFVALGKGQAIDFAKREKICMNPFTWLEVIEDEELSEKEGTLNTFAQEMKMLLPMY 620 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 + MASP+ LD+ + LL +A+R +WL N +D + DFLK D I +R Sbjct: 621 AKMASPSKPLDDYDKALLSRAIRETWLKFRNNNGVDQISDFLKEIRDQNG-----NIDAR 675 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + L+ + NG YG YFN + ++ + +M+ LEL L+D P L V+F ++ I Sbjct: 676 GWALGTQLENFKTNGMYGSYFNG-KANIDMNNEMIYLELEELKDSPELKTVVLFGVMNRI 734 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 MY + R+ K+ +DE W+LLD + FIE+GYR AR++ G++ TQ I D Sbjct: 735 MRDMYLS-RSQGKIVFVDEAWQLLD-DTEETAAFIEEGYRRARKYFGSFGMGTQGI---D 789 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 A+ AARAA+ +S +K L+Q + F K Q F I + W+S Sbjct: 790 DAFANDAARAAYNSSDWKFFLRQDEQSFEKLLQEKKANFSEAVIKQIKSIESIHG-WYSE 848 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 ++ N R DP S AM S++ D+ F+++ +G+S+ EA + L KK E+ Sbjct: 849 IMVTSPNGQHIVRHVADPFSLAMASTNKDDYNFIEECTNKGMSMTEATYALMRKKEAEEV 908 >UniRef50_Q1N8Z9 ATPase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z9_9SPHN Length = 862 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 187/863 (21%), Positives = 361/863 (41%), Gaps = 64/863 (7%) Query: 28 ANEVLGEMSFP-----QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEAL 82 E L +S P +FS LPYR Y++++ LF ND ++GF+LE P+ GA+E + +L Sbjct: 20 GGEELASVSLPMPDVEKFSGYLPYRSYDRDTELFYNDASVGFVLEIAPLTGADERVHTSL 79 Query: 83 DHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 + + L G + +S + ++ +G+ + + + A Sbjct: 80 NQIFSDILMPGCDFHVVSYASPRISKVVQEWCYPRYLAGDVFAKIANYRAGHLARGAWKS 139 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA 202 + P R++R S ++ SR + ++ + + + A T+T Sbjct: 140 MA----GDGPFVTRNFRTVFSVSV--RQGSRVNKRDLLTIRESLIAHFSAIGTPTRTFTP 193 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL--------- 253 + E+ + + +N QC+ F++ + D + Sbjct: 194 IELMQFCDELTTPSTGTG-DDALHYSDLDPINVQCIRPDFEIAIERDRILTRSQSLRMTG 252 Query: 254 -----GLRENG--RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT 306 G+ E G S+ + + PE W+ ++ NP+L+ CP + Sbjct: 253 RTLHDGVPELGIFTPSSFDVRALVVKNYPERFAAWDGQQLIGSIFNPKLNFGCPVAMVFQ 312 Query: 307 LVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYF 366 V D ++ + A LK++ ++ ++ P + ++A EW + + G +V F Sbjct: 313 GRVLDDTESATRAGLKHVRSKQLAEGKAVSLIPHLSRQAAEWENVASLVRVGHR-LVQGF 371 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 NI ++ A E + + ++ G++L ++ ++ + P GL L Sbjct: 372 YNINVISPRDS--AEENLRTVKAVYKAAGWDLSDQLHINIMSYCSMFPMNISSGLGDMLS 429 Query: 427 EAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 + + + N A P+ + ++ R Q A+ F N N+N A+ Sbjct: 430 RMKMQRTMVTTNAAAFAPMHGEFLGGNLPHMMLVGRRGQPAYWSPFQN--NEGNHNTAIF 487 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFA 542 G SG+GK+ +Q L S++ SG A++ D G ++ C+ +GG +++ L NPF Sbjct: 488 GKSGSGKSVFLQELCVSLVGSGAHAIIIDDGRSFEHTCKALGGRFIEFTLSSGLSVNPFR 547 Query: 543 NI------TDIDQSAE---RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARI 593 I TD D + + + MA L + +G++ +AV W + I Sbjct: 548 MIDADLAATDEDYHVDCLAMLMSIIGQMARHEQRLSDFEKGIIDRAVNQVWNDMGSNGTI 607 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 D V+ L N D ++ L+Q++++GTYG++F D + Sbjct: 608 DAVITALVNDDDPVG-----------QQIATSLNQFSSSGTYGRFFIGDSI-IDLTNPFT 655 Query: 654 VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI 713 V EL L R L AV+ S++ M ++ R + K IDE W+LL K + +F+ Sbjct: 656 VFELSDLASREDLRSAVLTSIMFLASQYMRKSDRTIPKALFIDEAWQLL--KGGSMAQFV 713 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 E RT R++ G+ IT TQ+I D+ S RAA NS + ++L Q + + +++ Sbjct: 714 EIYARTCRKYYGSLITATQSINDYYKSDGS---RAALENSDWSVVLAQKPETIGELSRMG 770 Query: 774 PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQ 833 + +I + +S ++ + RL +D S A++SS F ++ Sbjct: 771 RFELNEFTNALIRSLKR-QGTDYSDVFVRGPDTEFVARLVLDKFSSALFSSSPKVFAEIE 829 Query: 834 QKRKEGLSIHEAVWQLAWKKSGP 856 ++G+S+ +A+ +A+ ++ Sbjct: 830 ALHRQGMSMADAIETVAFPENAK 852 >UniRef50_Q1MY39 ATPase n=1 Tax=Bermanella marisrubri RepID=Q1MY39_9GAMM Length = 849 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 210/835 (25%), Positives = 379/835 (45%), Gaps = 51/835 (6%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 M+ S L P+ Y++ G+F N+ ++GF LEA P G +E+ + L+ ++ K Sbjct: 45 MNRYNLSSLFPWESYDETRGIFFNEDSVGFCLEASPSTGLSEADFKTLEGVISRKHEADS 104 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWS-----GEQAERFNAITRAYYMKAAATQFPLPEGM 149 + +++ V + R + + E + + R Y ++ Sbjct: 105 TIQFTIVADSNVDGIYKSWERSRTRNFDDPAYEIFQTLSENRRKYLLQGKWKSL----FS 160 Query: 150 NLPLTLRHYRVFISYCSPSKKK---SRADILEMENLVKIIRASLQGASITTQTVDAQAFI 206 +P +R++R+ IS+ P + S+ + + + + I ASL+GA + ++ V Q I Sbjct: 161 GMPYVVRNFRLIISFTIPKPRGGNISQTTVDALSSKRESIIASLKGAKVHSKLVHPQDLI 220 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 ++V +++ D P D S + Q V D ++ R+ + Sbjct: 221 NLVSALLHPTDDGYKPVN--YDENSLIKDQIVSSETAFLPGRDGSSI----IYRDKKVSV 274 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 L + + + P+ N + + L+ I CPFI T+++ D+V + K M Sbjct: 275 LPWSVRQYPQYWKGSNSDELIGSFLDNVRQIPCPFITTMSINFPDRVDEGGKIKQKTMRA 334 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 + + ++ +K+ P +K A +W + ++ +G S+V + F E + E Q Sbjct: 335 TQMADSAVSKFVPQWKKRASDWRYIEEKFQNGS-SLVKTLYQVVLFAPQGEEESCE--QA 391 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + + + G+ L RF + FL+ LP + G+ +R ++N N+ PL Sbjct: 392 LQDLYESYGWNLQKDRFIPVHGFLSALPMIFGREFVDDTNRLRRYRRMLTWNAINVSPLF 451 Query: 447 ADNPLTPAG-LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD 505 + LL R Q+ ID + N+N+A +SGAGK+ +I SVL Sbjct: 452 GEWQGDGNNSLLMHGRRGQVMTIDPYQNKAG--NFNIACSASSGAGKSFFTHEMIFSVLG 509 Query: 506 SGGFAVVFDMGDGYKSLCENMGGVYLDG----ETLRFNPFANITDIDQSAERVRDQLSV- 560 GG +VFD G Y+ +GG YLD T+ NPF NI + + L + Sbjct: 510 EGGKVIVFDSGRSYEETVTLLGGQYLDFGDKTRTICLNPFTNIPLDEGGLKDHLPLLKIL 569 Query: 561 ---MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 MASP+ ++ ++ + L QA+ ++ N+ + V++ L + E Sbjct: 570 ISNMASPSEDIPQIMKSALEQAIAKAFAKFRNKCSVTRVIEELLEMNSDESI-------- 621 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 E+ +L Y+ +G YG+YF D ++ + VVLEL L +P L V+ L++ Sbjct: 622 ---ELSKMLYPYSRDGVYGEYFEGD-ANIDLQDRFVVLELDDLAKKPGLQEIVLLILMMN 677 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 I Y + R+ KKL +IDE WRLL + G+FIE+GYR AR++ GA++T+TQ I D+ Sbjct: 678 INEVFYHSDRSQKKLCIIDEAWRLL---QGRAGDFIEEGYRVARKYGGAFMTVTQRIADY 734 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 + S A+AA+ N+ + +L+Q E + + ++ + + +S Sbjct: 735 YT---SPVAQAAYANADHTWLLRQKTDELRSSIERGEIDGSKGKFEVFNSLKTEQGK-YS 790 Query: 798 SFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 RL VDP++ +YS+ + +F++ KRKEG+ + A+ +LA K Sbjct: 791 EIAFMSPAGLGVGRLIVDPVTEKLYSTKAEEVQFLRNKRKEGVDLMTALTELAGK 845 >UniRef50_B4RLR8 TraC n=10 Tax=Neisseria RepID=B4RLR8_NEIG2 Length = 858 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 198/850 (23%), Positives = 347/850 (40%), Gaps = 55/850 (6%) Query: 36 SFPQFSRLLPYRDYNQESGLFM-------NDTTMGFMLEAIPINGANESIVEALDHMLRT 88 F S L Y Y+ ++ LF MGF+LE P G ++ ++ L Sbjct: 32 DFDHLSDYLNYGAYDTKTELFTLMSVKGDKPLGMGFILELNPFLGGSDDLIGKWGS-LYA 90 Query: 89 KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI---TRAYYMKAAATQFPL 145 LP P+ + + S LR + EQ + I R+ + A + Sbjct: 91 LLPEKTPIQVQIFGSPD--------LRNYFKEYEQVQASRPIDDPMRSTFETLAKKRTEF 142 Query: 146 PEG-------MNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 N + LR+ R +S + ++ + +L+ +R SL+ I + Sbjct: 143 WNKGTQKVLVENTAIRLRNLRCILSVNLNIPPDNAVEVSKAVSLLARMRDSLRSMQIYGR 202 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQ-----LDPYSDLNYQCVEDSFDLKV--RADYL 251 T +A + ++N P+ ++ ++ D L+ Q +E +KV L Sbjct: 203 TWNADDLLAWTTLLLN--PNRMFTGQQDEIDPVWDETKFLSEQMIETRTSIKVLDSGSGL 260 Query: 252 TLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 G R G A+ + R PE L NM +++ ++ + PF++++ + D Sbjct: 261 RFGNRAAGDCVIAQC--YSANRYPEEFHLSNMGALIGDVIEANMNYTSPFLISMAMFKRD 318 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 + + LK ++ +++ A P K +++ + G G +VS + Sbjct: 319 YDTSSNTVKLKAARAKQTAESKMAAVMPEAAKIKRDYDICLEAFGKGGGGLVSLLHQVVI 378 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 + + E E ++ ++ GF L ++ + ++LT LP K + K L Sbjct: 379 W--ERPENINLAESQAVSIWQAQGFGLYRDQYLQLGSYLTALPMAIDKEVEKYLDSKKRW 436 Query: 432 QRAESFNVANLMPLVADN-PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 N + P++ + L + R Q ID+F NYN A+ G SG+ Sbjct: 437 STKTMTNAVCMSPVIGEWHGLGRPVIGLFGKRGQAMGIDLFANPAG--NYNFAIIGASGS 494 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDI 547 GK+ ++R+ + G + D+G Y+ C+ +GG Y++ L F PF +TDI Sbjct: 495 GKSFFANEIVRNYMGLGTQVWIIDVGRSYEKFCQMIGGQYIEFTYEAGLCFPPFQMVTDI 554 Query: 548 DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD-FLKNASDS 606 ++ E ++ S+MASP+ +L E E L + + W +D V + LK Sbjct: 555 NEDIEMLKLIFSLMASPSDSLTEQQEAKLQRIIEEVWYEFGQEGTVDHVRERCLKCLITG 614 Query: 607 EQYAESPTIRS-RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS 665 P R + + L Y + G YG YFN + ++ +VVLEL L+ +P Sbjct: 615 SNEGGKPGERDLSMVAVADQLYTYCSEGIYGSYFNG-KLNVEFKNDLVVLELEELKTKPD 673 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 L +M ++ I MY + R+ K+ +IDE W LL FIE+GYR R++ G Sbjct: 674 LQQIIMQLIMYRIMQGMYLS-RSQYKIMMIDEAWALLG-DTGTAARFIEEGYRRVRKYKG 731 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 A T+TQ D+ KA A AA N+ + L+ AK P + ++ Sbjct: 732 ACGTLTQGANDYYKTKA---AEAALENADFVFQLRTGAKSLKTIQDKEPFEVNDGIMQIL 788 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEA 845 +K ++S + RL+ DP + SS D E V R +GL+ EA Sbjct: 789 RTL--SKTDYYSEIFVSTPIGYGVGRLYSDPFNVLASSSKAEDVEAVNHYRNQGLNTAEA 846 Query: 846 VWQLAWKKSG 855 + + ++ Sbjct: 847 IEAVLRDRAA 856 >UniRef50_C4NVU8 TraC n=29 Tax=Gammaproteobacteria RepID=C4NVU8_ECOLX Length = 815 Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 175/838 (20%), Positives = 347/838 (41%), Gaps = 47/838 (5%) Query: 30 EVLGEMSFPQF---SRLLPYRDYNQESGLFM-NDTTMGFMLEAIPINGANESIVEALDHM 85 + L E P+ + ++P Y+++ +F+ +D + GF P+ GA+E + E ++ Sbjct: 7 KKLEETLIPEHLRAAGIIPVLAYDEDDHVFLMDDHSAGFGFMCEPLCGADEKVQERMNGF 66 Query: 86 LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ--- 142 L + P L L S + + + + R +++ T Sbjct: 67 LNQEFPSKTTLQFVLFRSPDINQEMYRMMGLRDGFRHELLTSVIKERINFLQHHTTDRIF 126 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKK--KSRADILEMENLVKIIRASLQGASITTQTV 200 +G+ ++ ++F++ P K + +++ ++ L + +SLQ + +T+ Sbjct: 127 AKTNKGIYDNGLIQDLKLFVTCKVPIKNNNPTESELQQLAQLRTKVESSLQTVGLRPRTM 186 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRR-QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENG 259 A +I I+ ++N PD+ + + + Q + D++V + + LG Sbjct: 187 TAVNYIRIMSTILNWGPDASWRHDSVDWEMDKPICEQIFDYGTDVEVSKNGIRLG----- 241 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 + A++++ + P++ + + +L SI +++ + + T + Sbjct: 242 -DYHAKVMS--AKKLPDVFYFGDALTYAGDLSGGNSSIKENYMVVTNVFFPEAESTKNTL 298 Query: 320 NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 K ++ K+ P + + + + L + + G V ++ F E Sbjct: 299 ERKRQFTVNQAYGPMLKFVPVLADKKESFDTLYESMKEGAKP-VKITYSVVLFAP-TKER 356 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 N +R++ FEL+ +F + FL CLPF + + L + + Sbjct: 357 VEAAAMAARNIWRESRFELMEDKFVALPMFLNCLPFCTDRDAVRDLFR---YKTMTTEQA 413 Query: 440 ANLMPLVADNPLTPAGLL-APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 A ++P+ + T + QL + + +NTN N+ + SG+GK+ L Sbjct: 414 AVVLPVFGEWKGTGTYHAALISRNGQLMSLSLHD---SNTNKNLVIAAESGSGKSFLTNE 470 Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVR 555 LI S L G V D G Y+ L E + G ++ +G + NPF I + + + + Sbjct: 471 LIFSYLSEGAQVWVIDAGKSYQKLSEMLNGDFVHFEEGTHVCLNPFELIQNYEDEEDAIV 530 Query: 556 DQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTI 615 + MAS G LDE L Q + W K ++DD+ + + Sbjct: 531 SLVCAMASAKGLLDEWQISALKQVLSRLWEEKGKEMKVDDIAERCLEEEN---------- 580 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLI 675 RL ++ L +T+ G+YG+YF S + ++ + VLEL L+ R L V+ LI Sbjct: 581 DQRLKDIGQQLYAFTSQGSYGKYF-SRKNNVSFQNQFTVLELDELQGRKHLRQVVLLQLI 639 Query: 676 IYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 I+ ++ RN KK+ ++DE W LL K +V F+E YR R++ G+ + TQ+I Sbjct: 640 YQIQQEVFLGERNRKKVVIVDEAWDLL--KEGEVSVFMEHAYRKFRKYGGSVVIATQSIN 697 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW 795 D + + RA NS+ +L Q+ + + + + Sbjct: 698 DLYEN---AVGRAIAENSASMYLLGQTEETVESVKRSGRLTLSEGGFHTLKTVHTIQG-V 753 Query: 796 FSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 +S ++ ++ RL V + +YS+D D + Q K+G+SI EA+ + + Sbjct: 754 YSEIFIKSKSGMGVGRLIVGDFQKLLYSTDPVDVNAIDQFVKQGMSIPEAIKAVMRSR 811 >UniRef50_B7XGR7 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGR7_PSEPU Length = 821 Score = 616 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 181/835 (21%), Positives = 332/835 (39%), Gaps = 50/835 (5%) Query: 36 SFPQFSRLLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 S P+ S+L+ Y LF + +GF P++G+N + L L P Sbjct: 8 STPRLSKLINGLAYEPNLYLFQLEGNRLGFAFLCSPLSGSNGDEGDRLKAGLTVDWPEKT 67 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGE--------QAERFNAITRAYYMKAAATQFPLP 146 + L+ ++ + + LR E + + + + P Sbjct: 68 TIQFSLICTENINEMKTGFLRLRRAFRESGRTDLPVETQALLEKVTNARADYFSDRTMRP 127 Query: 147 EGMNLPLTLRHYRVFISYCSPSKK--KSRADILEMENLVKIIRASLQGASITTQTVDAQA 204 + +R + +S P ++ + + L +R SL ++ + + Sbjct: 128 VDSISGVRIREQSLVVSVTIPIANALPTQTEANAAKELFDGLRTSLDSCNLAAVPLTNDS 187 Query: 205 FIDIVGEMINHNPDSLYPKRRQL--DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS 262 + +I ++N P + + + + D LN Q ++ + L V+ D+L +G Sbjct: 188 YREIFSSILNQGPTASWREDPDMKADTDKPLNEQILDYNRSLDVKKDHLQIG-------E 240 Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 + R P++ + + + +++L+ I I+ +TL Q++T + + + Sbjct: 241 DCFVKTLSAKRFPDVMWQGDASQYLADILSQRGGIRGNCIINMTLYFPPQLETKDKLSKR 300 Query: 323 YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALE 382 +S + P + K + + L + L G +V + + + F + N E ++ Sbjct: 301 RQWSINQSFGPMVHFVPVLRKTKEAYDTLFEDLDKGLPNVQAT-MTLVVFGR-NREDLIQ 358 Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + + F GF L+ +F + F+ LP A K+L + ++ L Sbjct: 359 AASNAKSHFATQGFSLMEDKFCVLPVFVNSLPMCADPDAMKELFRFKTLSLTQALP---L 415 Query: 443 MPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 +P+ D T + + Q +F ++TNYN + SG+GK+ LI Sbjct: 416 LPIYGDWKGTGTHVAPFISRNGQPVSFHLFD---SDTNYNAMIAAQSGSGKSFATNYLIT 472 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDIDQSAERVRDQL 558 S L G V D+G Y L E G + + L NPF I D + + + L Sbjct: 473 SYLSIGAKVWVIDVGLSYLKLSEAYKGDFARFDQESNLCLNPFELIEDYSEEEDVLVGLL 532 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 S MA+P L + L + + W +D + D L D R Sbjct: 533 SAMAAPTVPLIDFQTAGLKRHLTQCWETLGKTMIVDSIADSLLADPD-----------PR 581 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + ++ L +T+ G YG++FN + +L VLEL L+ R L V+ LI I Sbjct: 582 IQDIGHQLFAFTSKGQYGRFFNG-KNNLNFKNPFTVLELEELKGRQHLQQVVLLQLIYQI 640 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 + MY R+ K+ +IDE W LL N VGEFIE GYR R++ G+ I ITQ + D Sbjct: 641 QQDMYLGERDRPKIVIIDEAWSLLSQGN--VGEFIEHGYRRFRKYGGSAIVITQGVNDLY 698 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 +K +A NS++ ++L Q A+ + ++ + K +S Sbjct: 699 QNK---VGQAIAENSAFTLLLGQKAEAIDAIQENKRLPLGEGGYRILKTVKSYKG-HYSE 754 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 + + RL VDP S +YS+ D + ++ G+ EA+ ++ + Sbjct: 755 IFMLTPRGAGIVRLTVDPYSILLYSTAPEDVQAIRNYTLTGVPQDEAILRVLRDR 809 >UniRef50_Q5ZTS4 TraC n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS4_LEGPH Length = 865 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 218/864 (25%), Positives = 384/864 (44%), Gaps = 50/864 (5%) Query: 8 VTQAVNSLVTALKLP---DESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGF 64 ++ A SL+ L+ ++ ++ + + LP Y+ E+ ++ Sbjct: 34 LSHATGSLLETLREELGMTDAHHKKQIEALLDTYCLAPYLPDEVYDSEADIYPYKQASHM 93 Query: 65 MLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQA 124 M E + GA+E V L +L LP +S +G I+ + + E Sbjct: 94 MFECSTLIGASEETVTILTSILTDILPPESCFHALFWASPKIGHMIDEMEHQRNQGSEVL 153 Query: 125 ERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVK 184 + +Y K + LR +R+F+ P K D L + +L + Sbjct: 154 KALAHRRAEFYRKGVYSSLT----KESNFVLRDFRLFLCISIPRK-SIEDDRLLLGSLRE 208 Query: 185 IIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDL 244 I +L+ +I + + + I + E + DSLY ++ D +++ +Q + + Sbjct: 209 DISNNLKSVNIICKELSIEEVISLKREWLFP-TDSLYEEKTNYDTNTEIRFQLTDIEASM 267 Query: 245 KVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 +V+++ + + E+ R I + + P+ W + D + + N L ISCPF+ + Sbjct: 268 RVKSNQIEIEREEDTR----VIKCLSVRQYPKSPVQWQLGDLFGKMFNTSLQISCPFLFS 323 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSY-AKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 + ++D+ K + + KY D + +K + AKW + K+ E ELR+RL SG S+V Sbjct: 324 FAIRIKDKDKVMAALDAKYADEGQNAKQPFIAKWVKNFNKKYAEIEELRERL-SGDDSLV 382 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + N+ F N + + FR N F+L +P ++ L +PF +G+F Sbjct: 383 DSYYNVLLFTTPAN--VRRDVRRAKDVFRGNQFDLRTPTGLQLQTLLASMPFAPAEGMFD 440 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPA-GLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 K G V+ SFN NL+P+ + + P R Q F I+F NYN+ Sbjct: 441 DYKSFGRVRPLTSFNTVNLLPIQGEWKGAGRFAQVYPQRRGQ--FTAIYFFDNVVRNYNV 498 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFN 539 A+ G GK+ L+ I+S+L GGF + D+G Y CE + G +D + N Sbjct: 499 AIVAPPGKGKSFLMNDYIQSLLSQGGFVYIIDVGGSYAKSCEMLNGQLIDFNHDTEISLN 558 Query: 540 PFANITDIDQSA-------ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRAR 592 F+ I ++ ++ + +MA P+GN+ + + +A+ A W N Sbjct: 559 LFSTIDAQAKNDTAFKDVHNQLIQLVGMMARPSGNVSDEERSHIEKAIEAMWRQHHNATT 618 Query: 593 IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM 652 I + L++++D + LL YT NG YG YF SL + Sbjct: 619 ITLIAHHLESSNDPIS-----------QNIGRLLYSYTKNGRYGSYFE-PPCSLDFKRNL 666 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL-DFKNHKVGE 711 V+LELGGL+ L V+ L+ I N MY TP+++ K +IDE + LL D Sbjct: 667 VILELGGLDGNKDLQRIVLKILMYQITNAMYYTPKHIPKSCLIDESYELLSDNGTGGSAN 726 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 F+ +GYR A ++ G +IT+T + D++++ A+ + N+ YKI L S Sbjct: 727 FVNEGYRRAPKYGGNFITVTHGLDDYENN---PTAKMCYDNAYYKIFLGASKSTIDTL-- 781 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 +Q +I + +S FL+ E +S+ HRL VDP SR + ++ GP+ E Sbjct: 782 KTSNQLDAYGERLIRSLKITNE--YSEFLMMCEENSTVHRLIVDPFSRVLNTTRGPEVEA 839 Query: 832 VQQKRKEGLSIHEAVWQLAWKKSG 855 +++ GL + +A+ ++A + G Sbjct: 840 LKRLMATGLPLADAISKVALEVYG 863 >UniRef50_C5SIK7 Type-IV secretion system protein TraC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK7_9CAUL Length = 915 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 202/845 (23%), Positives = 345/845 (40%), Gaps = 59/845 (6%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 P S LPYR +++ L++ D T+G +LE IP+ G ++ L + LP G + Sbjct: 41 PSLSGYLPYRSFDEVRQLYVQDATVGLVLELIPLLGVTDAQHALLAQVFNDALPDGAHVQ 100 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 I +S G ++ R S GE E R + M T F + P ++R Sbjct: 101 IINYASPRTGHIVDSWARSRSAGGEIFEELARHRRQHLMNGIWTSF----SKSAPFSMRD 156 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP 217 YRV ++ A + L ++I+ +L T+ + ++N Sbjct: 157 YRVILAIEVRGDVSGPAG-DALAELREVIKGTLASMGGAAFTLMPDQLLSFCAAVLNPTS 215 Query: 218 DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG------------LRENGRNSTAR 265 ++Y D LN Q V + D L L + R Sbjct: 216 STVYD-SIPYDREDWLNQQIVRRDTTVTQYRDRLVATTAYAGDGYDQDLLPKGSRRERWE 274 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELS-ISCP-FILTLTLVVEDQVKTHSEANLKY 323 F R PE A +A + N +L I +L + + D+ KT E +K Sbjct: 275 FRAFSPVRYPENASQAVVARLIGDFFNNQLQNIGSNLTVLYFSPMTLDESKTTVE--MKT 332 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV 383 M +++ + AK+FP++++ A +W Q + G + + A + A Sbjct: 333 MRTSQQASSPTAKFFPAIQRAADDWTAANQAVSMGAKLC---HMGMFAISITPLQDADRA 389 Query: 384 EQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLM 443 E+ + + GFEL H++ L LP G GL K ++R + +A L Sbjct: 390 ERQLRAVWGGAGFELSRSDVLHLQTLLAALPLTMGDGLADDYKAHKRLRRMPTSCMAMLA 449 Query: 444 PLVAD-NPLTPAGLLAPTYRNQLAFIDIFFR---GMNNTNYNMAVCGTSGAGKTGLIQPL 499 P + +L R Q F F GM N+N++V G SG+GK+ L+Q + Sbjct: 450 PFQGEFRGFQRPDMLFLGRRGQPFFFSPFSNEEEGMGGGNHNVSVIGASGSGKSVLMQEM 509 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANIT----DIDQS-- 550 + G +V D G +++ C+ GG +++ L NPF+ + D+D+ Sbjct: 510 AGGLRGRGADVIVLDDGYSFRNTCKIQGGQFIEFNLSSDLNINPFSLVDYQEADLDEEYR 569 Query: 551 ---AERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 ++ + MA + + G++ +AV + K I+DV +L+ Sbjct: 570 SESINALKYTVLQMAKGDDLYLKEELGMIERAVVEVFETKRAEGGIEDVALYLEAHFGDP 629 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL 667 A M + ++ Y G+YG+ +N + +L + V EL LE + L Sbjct: 630 GRA-----------MAIAMEPYRLRGSYGKLYNG-QANLEISSPFTVFELSPLESKKDLR 677 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 V+ SL++ I RM R KK IDE W+LL + G FIE R R+ GA Sbjct: 678 AVVILSLLMVIRQRMKHGGRARKKALFIDEAWQLLG--DGAAGPFIEGFARRCRKEGGAL 735 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGK 787 IT TQ++ D+ + ++ RA NS + IILK + + + + ++I Sbjct: 736 ITGTQSLEDY---QRTAGGRACIQNSEWNIILKLKPESVDAFANEGILRASEAELELIRS 792 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVW 847 ++ + +S ++ RL +DP S A+YS+ + +++ G S EAV Sbjct: 793 LFTSQGE-YSEAYIRGAGTKFIGRLVLDPYSLALYSTKPEVLDAIERLVSAGYSAKEAVR 851 Query: 848 QLAWK 852 +A+K Sbjct: 852 SVAFK 856 >UniRef50_Q8L274 Pilus biogenesis protein n=5 Tax=Gammaproteobacteria RepID=Q8L274_PROVU Length = 828 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 193/846 (22%), Positives = 339/846 (40%), Gaps = 61/846 (7%) Query: 36 SFPQFSRLLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 +FS + P Y++++ LF + + + F P+ G+ + L +L + P Sbjct: 12 GIKRFSDVCPVNAYDEKNRLFTLENKYIAFGFVCRPLAGSTGKETDQLKTLLSSNFPPKT 71 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + L++S + +I + + E NAI +T +P+ + Sbjct: 72 IVQWDLIASPNIVKKINQ-MDFLRINCEDPILKNAIYNRSKFLLHSTDYPMK---GVGTR 127 Query: 155 LRHYRVFISYCSPSKKKSRADILEME---NLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 +R + + P K EM SL + + +++IDI+ Sbjct: 128 VRDCLLVCTVKIPIKANYEPKDEEMNLFNEFRTSFDTSLGILGLAPSPLTRESYIDILAS 187 Query: 212 MINHNPDSLYPKRRQLDPYSDL--NYQCVEDSFDLKVRADYLTLGLRENGR------NST 263 ++N ++ + R + DL + Q V+ +R+ Y+ G E+ + T Sbjct: 188 VLNQGENASWRDRSPVQVQDDLLVSEQLVDPDRSFFIRSKYVAFGNPEDEKQRGERQTET 247 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 I + P + +L++ I I++++L+ DQ S K Sbjct: 248 TFIRTLSAKKLPTRFWPGQAQYYLGDLMSGATGIKSSCIISMSLIFNDQQSAKSTFTRKR 307 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC--KDNNETAL 381 + ++S AK PS + + + L +L +G+ V ++ F KD A Sbjct: 308 AWVVQQSDGPMAKLIPSYKTSREGFDILADKLDNGEP-VCRAKFTVSIFSNSKDGVFRAS 366 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 + LN+++ F+++ FL+ LP K G + Sbjct: 367 QEAASYLNTYQ---FKMVPDTNFVAPIFLSALPMFNEASAE---KVIGRYRTLALSEALV 420 Query: 442 LMPLVADNPLT-PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI 500 L PL AD T L+ + Q+ ID+F ++TNYN + SG+GK+ L +I Sbjct: 421 LTPLYADWQGTKNPALMLTSRSGQIQMIDLFD---SDTNYNACIAAESGSGKSFLTNYII 477 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANI----------TDI 547 + G D+GD YK++CE GG YLD N F I TD Sbjct: 478 TAYRSLGAKVWCIDVGDSYKNICETYGGDYLDFHPDKKPCLNFFELIEDYFGEDPTNTDG 537 Query: 548 DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 + + + L+VMA+P LD+ L + V + +D V + +D Sbjct: 538 NGEEDLIIGLLTVMAAPQKGLDDFQTARLKEHVALLIREHGKQTTVDMVAESCLKDAD-- 595 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL 667 R+ ++ L +T+ G YG+YF + ++ VLEL LE L Sbjct: 596 ---------RRVSDIGSQLYPFTSRGQYGRYFVG-KNNIDFRNPFTVLELSRLESSEHLK 645 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 V+ LI I+ M+ R+ K+ VIDE W LL +G+FIEKGYR R++ GA Sbjct: 646 QVVLLQLIYQIQQDMFLGDRSQMKIVVIDEAWALLKGN---IGDFIEKGYRRFRKYKGAA 702 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGK 787 ITITQ+I D D S +A NS++ ++L Q + + Sbjct: 703 ITITQSINDIYKD---SVGKAIADNSAFMLLLGQGESAINEAQASKRLALDDAGYRFLKT 759 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVW 847 ++ +S + + RL VDP S +YS+ D +++K+ GL+ +A++ Sbjct: 760 VRSSSG-VYSEVFVISKAGQGISRLIVDPFSLLLYSTHPDDVSEIRRKKDGGLTTEQAIY 818 Query: 848 QLAWKK 853 ++ + Sbjct: 819 EILRDR 824 >UniRef50_Q2LTZ9 Sex pilus assembly protein n=3 Tax=Deltaproteobacteria RepID=Q2LTZ9_SYNAS Length = 844 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 183/840 (21%), Positives = 343/840 (40%), Gaps = 64/840 (7%) Query: 38 PQFSRLLPYRDYNQESGLFMN-DTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPL 96 +FS LP+ Y+ E+ + N D T GF+ E P+ A E + L+ + R LP G + Sbjct: 41 DRFSDYLPWIAYDGETEAYHNADGTKGFLWECSPLCFAGEKTLFTLEGLFRLGLPHGSVM 100 Query: 97 CIHLMSSQLVGDRIEYG----LREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLP 152 L + + IE R+ + E +E+F A +++ + Sbjct: 101 QFILHADSHIDPYIEAYRSGKTRDLAIVHEASEKFAA-----FLEKGVEGMDIFLKT--- 152 Query: 153 LTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 LR++R+F++ P +++ + L ++L I L+GA + + V A ++ + Sbjct: 153 -PLRNFRLFVAVKFPEEREMK---LHAKDLSNSILEILRGADLYPRPVPPHALVEWMRRY 208 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 +N P P D + Q + ++ D + +G R + Sbjct: 209 LNDVPS---PNNDAYDDSIPIRKQVIFSDTVIEKSMDRMKVGNR--------YFRCTTVK 257 Query: 273 RNPEIAFLWNMADNYSNL---LNPELSISCPFILTLTLVVED-QVKTHSEANLKYMDLEK 328 P+ + + + ++ I+ PF L +V + + K H++ NL L++ Sbjct: 258 HYPKEVDPLQTNELFGGVWGVVSDANQITTPFFFALNVVFHNLKSKLHTKCNL---VLQQ 314 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + S+A PS+ ++ E+ + G V + I D+ +T E Sbjct: 315 QGVGSFA---PSLMRKKDEYMTAVDEVEKGTPFVR--VIPILWVWGDSEKTVSESIVRAK 369 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD 448 + G+ + R FL+ LPF + A +VA +P+ AD Sbjct: 370 RMWEAQGYVMQEDRGILPVLFLSSLPFGL-YDRDDNVDNLDRDFIAPCDSVAVTLPVQAD 428 Query: 449 NPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG 507 L+ + Q +D+F R N N+N+ + +SG+GK+ L+ L+ + S Sbjct: 429 FSGGGKPSLIFIGRKGQPCSLDVFDRHAN--NHNIFIAASSGSGKSFLVNYLVYNYFASS 486 Query: 508 GFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQSAERVRDQLSVMASP 564 + D+G YK + G +LD + NPF N+ D + + M Sbjct: 487 ALIRIVDIGGSYKKMTRLFGARFLDFSEQSRICMNPFTNVMDPAGDLPVIASIVLQMVYS 546 Query: 565 NGNL-----DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES------P 613 + ++ E L+ AV+ +W + A ID V ++L + + +S Sbjct: 547 STDIVPEDTAETAMSLIKSAVKWAWRTEGADASIDTVYEYLSTFPEHAEEFDSCHENDIA 606 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 RS + L ++T+ YG++FN + VVLEL L+ + L + Sbjct: 607 AFRSLSRNLSFNLTEFTSGHLYGKWFNGTSDFNIAGDEFVVLELEHLKPQKELFKVITLQ 666 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 +I + +Y + R+ + + DE W+ + + G IE+GYR AR++ G++ ITQ+ Sbjct: 667 VINAVTQDLYISDRSRPRFIIFDEAWQFMQEGSSLKG-VIEEGYRRARKYGGSFTVITQS 725 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 I+D + S NS++K L+ S + AK L + L ++ + K Sbjct: 726 ILDL--KQFGSIGDVIRSNSAFKFYLESSDFDRAKLEGLIEHEGFAL--KILKSVRSNKP 781 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 + +S + RL VDP S +Y+SD + ++ G+S EA+ ++ + Sbjct: 782 K-YSEIFMDTPFGQGVARLAVDPFSYYLYTSDAAEIAEIESLVDNGMSYGEAINEMVKRY 840 >UniRef50_Q6MB95 Putative inner-membrane protein traC n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB95_PARUW Length = 828 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 194/871 (22%), Positives = 358/871 (41%), Gaps = 69/871 (7%) Query: 5 LEAVTQAVNSLVTALKLPDE---SAKANEVLGEMSFPQ---FSRLLPYRDYNQESGLFMN 58 + + Q + ++V L S+ + L +P S L Y Y++++ LF+N Sbjct: 1 MRSFLQKLGNIVAGLFGESPFSFSSDTAQALPSDPYPSATPLSAYLSYDVYDEDNELFIN 60 Query: 59 DTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFS 118 ++GF +E +P+ G++ + + + + L G + L + + + + Sbjct: 61 KKSLGFAIEMLPLVGSDHAAQKNIQSLFDEVLEEGESIQCLLWTDHRIDPFLNFWEEPRK 120 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKK---SRAD 175 G + A R + FP +R +SY P K + Sbjct: 121 QKGGIFAKI-AHQRVKTFRHHKQFFPSL-----------FRFVLSYTVPFKGDLQTNAPL 168 Query: 176 ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM--INHNPDSLYPKRRQLDPYSDL 233 I +M+ + L+ S + + +D+VG M + + +++ P +PY L Sbjct: 169 IQKMKAKKEKCLRILRALSRSARVWKPIDLMDVVGGMCQFSFSTEAVTPL---WNPYQSL 225 Query: 234 NYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNP 293 Q L+++ L + R S +F + PE L M ++ Sbjct: 226 ASQI-PRGTSLEIQEGQL-----KANRPSPLAFKSFRVVDFPEFWSLSQMQHLIGDVERD 279 Query: 294 ELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY-AKWFPSVEKEAKEWGELR 352 + CPF L + Q + ++ +EK+ ++S K P + E KE R Sbjct: 280 SFRLLCPFYLHWAVHCPSQQLAEQKFKVREKFVEKQGQSSMFLKMVPQLADELKEIQYAR 339 Query: 353 QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 + + G V + N++ + + + E+ + FR N F L+ + + FL+ Sbjct: 340 KEIYQGARYV---WTNLSVGIWSSPDNLVHSEEILKGIFRNNRFTLVENQAFPLAAFLSA 396 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT--PAGLLAPTYRNQLAFIDI 470 LP + + K LK + + N +PL + T +G+L R QL + Sbjct: 397 LPLSLAESV-KGLKNLNFFRTTLNRECGNYVPLQGEWYGTLKSSGILLAGRRGQLMNWNP 455 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 F NYN+ V G SG+GK+ +Q LI + L +G V D+G + LC+ + G Sbjct: 456 FDNDHG--NYNITVVGRSGSGKSVFMQELIFNGLGTGAKVFVLDVGRSFDKLCQALEGQM 513 Query: 531 LDG---ETLRFNPFA-----NITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRA 582 ++ T+ NPF N+ +++ ++ ++ MA + L+ ++++ Sbjct: 514 IEFSRQSTICLNPFTKFPLNNVNELNDCIILLKSIIANMADSINGMSSEQMSLIEESIKE 573 Query: 583 SWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 W K A + DV ++LK D + ++ +L YT +G +G YF Sbjct: 574 VWKLKGCEASLTDVANWLKQHEDVQ-----------ARKIGRMLFPYTIDGVFGHYFEG- 621 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + ++ V++EL L+++ L V+ LI+ I ++ + R + +DE W LL Sbjct: 622 KNNVDFTNPFVLIELEELKEKKELQAVVLQLLILTITDQAFLGDRKTRFYICVDEAWDLL 681 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 + G FIE R R++ G+ I TQ + DFDS A+AA+ NS + L Q Sbjct: 682 RAN--QTGPFIETLARRLRKYNGSLIVGTQQLEDFDSY---PGAKAAYANSDWACFLPQD 736 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 K A + + I +S L+ S HR ++D S +Y Sbjct: 737 DKTIATLKA--ESKMPEGKIQAIENLNTLHG-VYSEVLICQGKSYSTHRFWLDSFSNLLY 793 Query: 823 SSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 S+ DF +Q+ R++G S+ EA+ +L +K Sbjct: 794 STQAADFSRLQKLREQGKSLEEAIEELVQEK 824 >UniRef50_Q3IUW4 TraC n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW4_RHOS4 Length = 827 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 196/851 (23%), Positives = 357/851 (41%), Gaps = 61/851 (7%) Query: 19 LKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESI 78 + A A +++ + LLPYR ++ ES LF N + GF++E P+ GA++ + Sbjct: 17 WSEDEPQALATDIV--------ADLLPYRLFDPESELFFNQNSTGFLIEVNPVVGADD-V 67 Query: 79 VEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKA 138 L ++ + P G + +S + ++ R E R +++ Sbjct: 68 ASNLQAVINSNAPNGATIQFLNWTSPDIDGQLVRWARHRLRGDELVMEMAQ-RRMAHLRG 126 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 A H RVF++ C + E++N + + + G + Sbjct: 127 ARFGTDHVIKALP----HHRRVFVA-CWLDGDADLSQQKELKNFRRSLYSVFGG-EAYVR 180 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN 258 + F+ +GE+++ + LN+Q ++ A L Sbjct: 181 HLGPDDFLKFLGEVLHCR-GLVGISDLTYTAEEALNHQLPGAGLTVQRTAIGLM------ 233 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 + + + R P + P + + T+ V + S Sbjct: 234 -GEPPMAVSSATVRRFPREWQFVLGILLNGVPERIAERPAGPVLTSFTMRVRSKSDATSF 292 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 K L+ + T +A++ + ++ E+ L Q++ G+ + + ++ + A+ K E Sbjct: 293 LMKKRAGLQHTASTQFARFATGLSEKMAEFEGLNQQVELGERLLDTTYV-VCAYAKGTAE 351 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 A ++ +R G L + F + FL LPF + LK+ ++ +S Sbjct: 352 DARHSLAEVAKIYRYAGLVLENDTFVQLPVFLAALPFAVHGKRMEDLKKLQRMKILKSEA 411 Query: 439 VANLMPLVADNPLTPAG--LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 + L P+ + + G +L + Q+ D F ++ NYN+AV G SGAGK+ + Sbjct: 412 ASALAPIHGEWTGSGNGRGVLLLGRQGQIMDWDNF---ASDGNYNVAVVGKSGAGKSVFM 468 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGE-TLRFNPFANITDID----- 548 Q L+ S+ +GG VV D G +K+ E +GG ++ DG +R NPF+ ++ D Sbjct: 469 QELVTSIYAAGGRVVVIDDGYSFKNTVEILGGTFVGFDGSVQIRLNPFSMLSAEDMEKDE 528 Query: 549 ---QSAERVRDQLSVMAS----PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 + E V ++ MA+ ++E EG + + V W K + DV + L+ Sbjct: 529 YRADAIELVTGIIASMAALGEGKQSRVEEFEEGRISRIVADVWAEKGAAGEVTDVWERLR 588 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 ++ +Q RL +++V L+ +T +G YG YF LR + V EL ++ Sbjct: 589 AFAEEDQ---------RLADVVVKLEAFTRSGPYGHYFAGPAT-LRLETAFTVFELSDIK 638 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 + L V+ ++ M++TPR + +IDE W LL K+H FIE R AR Sbjct: 639 GQKVLQDVVLQIVMFLGTELMFKTPRAVPVAILIDEAWDLL--KSHATARFIEGVVRRAR 696 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 ++TGA IT TQ+I D+ ++ A A NS + ++L Q A+ + Q P Sbjct: 697 KYTGALITGTQSIDDYYNNVA---ATVCLQNSDWTVLLAQKAETIDRLVQDRRLSVSPHI 753 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLS 841 + + K FS ++ N + RL +DP S A+YSS G E + + + +G + Sbjct: 754 AGQLKSLQSVKG-LFSEMGVKGPNGWFFGRLLLDPFSLAIYSSKGSTVEKINRLKDQGYT 812 Query: 842 IHEAVWQLAWK 852 EA+ L + Sbjct: 813 TVEAIRILVEE 823 >UniRef50_A4JTN9 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A4JTN9_BURVG Length = 819 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 184/837 (21%), Positives = 331/837 (39%), Gaps = 58/837 (6%) Query: 44 LPYRDY-----NQESGLFM----NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 LPY+ + ES +F+ ++ +G A P+ GA++S V+ L P G Sbjct: 23 LPYKKVTVQACDPESKVFLASDGSEHYLGACFVADPLKGADDSTVDKFRSALSMPFPPGT 82 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + I L++S D ++ L E + + G + Sbjct: 83 FVQIGLLASPDADDYLDAYLEGKYHDNEVLRALALQHASLVRRGKDQALVTRSG----VL 138 Query: 155 LRHYRVFISYCSPSKK--KSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 L R+ I+ +P + + DI ++ + + A + T +DA+ ++ ++ + Sbjct: 139 LNRQRLVITIKTPCARALPTDGDIAAARETADRVQEAFKAAELETLQLDAEGYLVLLRLL 198 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 + D +N Q + ++ N A++++ + Sbjct: 199 TKLWDHPSH----HYDETRPINEQVYFPGDAVNYDD---PTTIKFNDGAHYAKVMS--VK 249 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P+ A L M + L I+ P+ + LTL DQVK + L + Sbjct: 250 YFPKRASLAIMNHMIGDPLGLSNQITDPYYMVLTLHYPDQVKKVDWVKGRSSMLNHQVFG 309 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 A P++ + L + S V + F + + E ++ + + Sbjct: 310 PTAHMIPALGYKKHGMDVLIHDIEGKGSIVCEANFTLFLFSR-SREKLNKLVAGLQAYYT 368 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 FE+ R + LP + +K + MP++ + + Sbjct: 369 SLAFEIREDRRILEPLWNNLLPLNTS---REGIKNLFRFHTMGISHAVQFMPVIGEWTGS 425 Query: 453 P--AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 LL T R Q A ID++ + TNYN V +GAGK+ L Q ++ L G Sbjct: 426 GRSGALLLVTRRGQPALIDLYE---SATNYNGVVFAEAGAGKSFLTQKIVSDYLAEGAKV 482 Query: 511 VVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN 567 D G Y LC+ + G +++ L NPF I ++++ + ++ L+ MA+P+ Sbjct: 483 WAIDAGRSYFKLCKAVKGTFVEFKQDSDLCLNPFTFIENLEEEMDILKAMLAKMAAPDET 542 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 LD L +A+ + + A + V +F D + + L Sbjct: 543 LDAYPMSRLEEAITSVYTKYGKNATVKAVAEFCLAQPDEDT-----------QRLGKQLF 591 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 + A G Y ++F D +L D VVLEL L+ R +L V+ L+ I M+ T R Sbjct: 592 PF-AGGAYTRWFEGDN-NLDMDNAFVVLELSDLKGRKALQQVVLLQLMSRINYDMFLT-R 648 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 KK+ +IDE W LLD + +G+ +E YR AR+ GA + +TQ+I D + S AR Sbjct: 649 GRKKILIIDEAWELLD--DPLMGKAMEALYRKARKEEGAVLIVTQSIEDLYN---SPNAR 703 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL-QVENH 806 A NS+++ ILKQ+++ + P M+ + +S ++ + E+ Sbjct: 704 AIAANSAWQFILKQNSESIDGAIAGGQFKIEPYGAAMLKTVHTVPGK-YSEVMVKRSESE 762 Query: 807 SSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEA 863 RL VD ++ ++S+ + + G S+ +AV Q + E A LEA Sbjct: 763 WGIFRLTVDRFTQVLFSTKNDERNAIFDAIDRGDSVVDAVHQFI-DRENSEKAELEA 818 >UniRef50_Q5NX56 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX56_AZOSE Length = 815 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 162/831 (19%), Positives = 321/831 (38%), Gaps = 59/831 (7%) Query: 42 RLLPYRD-----YNQESGLFM-----NDTTMGFMLEAIPINGANESIVEALDHMLRTKLP 91 R LP++ ++ E+GLF + +G P+ G S+ E L LP Sbjct: 20 RRLPWQYLGAEGFDDETGLFYCVSPSGERHLGATFMTTPLLGGGGSVFEKFKAALACPLP 79 Query: 92 RGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNL 151 G + + L+ S + ++ ++ EQA +K P+ Sbjct: 80 AGSFVQVGLLGSPDIDPYLDA----YTDGKEQATGLLEKLVRTRVKMFQDAVHKPQFKTN 135 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIR---ASLQGASITTQTVDAQAFIDI 208 + R +R+ + P S D+ E +++ + + +D ++ + Sbjct: 136 GVLNRDFRLIFTVKIPCS--SLPDLEERQSIRSDVTRVMEGFSSIGFQFRMLDPHGYLHL 193 Query: 209 VGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILN 268 + + + + D + Q D++ + + + G + + Sbjct: 194 IRKFYHMWEKPEFS----YDELIPIREQAFYPGDDIEFKENEILF---HQGSDQEFFVRV 246 Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 P+ + + I+ PF T DQVK E ++M + + Sbjct: 247 MSPKLFPKRTVFGVANLLIGDQMGGANQITEPFFFQFTAHYPDQVKKKGEVRQRHMWITQ 306 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + + A WFP + + + + + L++ F K+ + A + + Sbjct: 307 QCIGNSATWFPILGYKKEGIETFIHEIDGQGGMALEVNLSLMIFSKNRDRLARQTA-SLN 365 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD 448 + F++ + + LP A + A L+PL AD Sbjct: 366 SYLSTLSFDMREDKRILDFLWHNALPMNASADAMT---RTFRTNTMSARQAAPLVPLFAD 422 Query: 449 NPLTPAGL--LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 + A L T R Q++ ++ +NT YN+ V +G GK+ L Q +I L Sbjct: 423 YKGSGANATSLFVTRRGQVSAFSVWD---SNTGYNVVVFAGTGGGKSFLAQLVIVDNLAE 479 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQSAERVRDQLSVMAS 563 G V D+G + L + G Y++ + NPF +++ID+ + ++ ++ MA+ Sbjct: 480 GCKVWVIDVGKSFFKLNRALKGDYIEFSEESQIILNPFTFVSEIDEDIDIIKATIAKMAA 539 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 P G LD+ L + ++A+W + + + V + D R+ ++ Sbjct: 540 PEGGLDDYQMAALEEGIKATWDRYAHNSTVTAVAQWCMQQPD-----------PRVRDLG 588 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L +T +G+YG++F E ++ + VL+L L+ RP L V+ L+ I MY Sbjct: 589 QQLYPFTVSGSYGRWFEG-EATIDVSNRFTVLDLLHLKSRPILQKVVLLQLMNRIATEMY 647 Query: 684 RTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS 743 TP +K+ V+DE W L+D + + + IE YR R+++GA I ITQ + D S Sbjct: 648 TTP--GRKILVLDEAWELMD--DPLMAKAIEALYRKVRKNSGAVIFITQGVGDLFQ---S 700 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL-Q 802 RA + NS+++I+L+Q A+ + + +S ++ + Sbjct: 701 PNGRAIYANSAWQIVLEQRAESVDAAVASGQFSMDAFGIHQVKSLHVVPGE-YSELMIKR 759 Query: 803 VENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 ++ R DP +++S+G + + ++G E + K+ Sbjct: 760 SDSDYGIVRFRPDPFMFTLFASNGEERDEAIAAIEQGADPEEVIDFYTQKR 810 >UniRef50_A0R7Q8 Sex pilus assembly protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7Q8_PELPD Length = 816 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 175/853 (20%), Positives = 337/853 (39%), Gaps = 50/853 (5%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFM-NDTTMGFMLEAIP 70 + L + L A E+ + S LP+ Y+++S L++ D +G+ E P Sbjct: 1 MKRLTSLLFGKKGGATKREMRLLAEREKISDYLPWIAYDRDSHLYLLADDCLGYAWECSP 60 Query: 71 INGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI 130 + A E+ V L+ + +P L + + + + E Sbjct: 61 LFFAGENTVSTLEGLFGGDIPPEAVYQFILFGDSYIEPILHEYKQRKKLDHDVVELITES 120 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASL 190 +Y ++ + G + ++ +R+FIS P K D+ + +++ I L Sbjct: 121 LSDFY-RSGTSGLKNMSG----IPVKRFRLFISIKFPQKWAEGVDLNQTWSMINEI---L 172 Query: 191 QGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 GAS+ ++ + +D + N P + D + Q + L + Sbjct: 173 TGASLHPVCLEPELLLDWGRRLFNDKPSA---NNSLYDENIPIRKQML-LGTKLTRNENT 228 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 L +G+ E + + L++ PF+ +T+++E Sbjct: 229 L----NVDGKIFRCITPKTWPHE-IETLSINKLFGGIKGLMSDGEQFKTPFLYCMTVLME 283 Query: 311 DQ-VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 Q K H++ N L+++ S+A P++E+ E+ L G+ + + Sbjct: 284 PQKNKLHTKCNFI---LKQQGVGSFA---PALERTKGEYLWAVDELERGKKFLRI--IPA 335 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 D+ E + NGF + R + FL LP G + AG Sbjct: 336 LWVYSDDEWKVNESLTRAKVIWESNGFVMQEDRGILVPLFLASLP----HGFYNVGNNAG 391 Query: 430 VVQR---AESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 ++R + +A +P D + +L + +L D+F +G + N+N Sbjct: 392 YLERDFIVPAETIAATIPCQGDFSGFGSPSMLLVGRKGELFGFDLFAKGAD--NFNGFCV 449 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF---NPFA 542 SG+GK+ L+ ++ G + D+G K L + Y++ NPF Sbjct: 450 AGSGSGKSVFANSLLCNMRAEGNIIRIMDIGRSMKKLAKMFNARYMELSEDSMDNLNPFT 509 Query: 543 NITDIDQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 +++D + + + + ++ MA +G E+ L+ QAV ++ + N A I V +L Sbjct: 510 HVSD-ETALQTIIPVVTQMAFSSGASMPSELDVNLIGQAVEWAYANEGNDAGITTVFQYL 568 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 ++ +ES IR D++ L ++ +G Y +YFN +MVVLELG + Sbjct: 569 RDFKKLVG-SESFEIREAADKLAFNLAHWSGDGVYAKYFNGKATFDIASDEMVVLELGSI 627 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 + +L V +I + Y + K+ ++DE + L +H G IE YR Sbjct: 628 KSLANLYRVVTQLVINEVALDAYHSSGKDKRFILMDEAHQYLGESSHIKGT-IEGFYRML 686 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 R+H+ I+Q+I+D ++ + + NS+YK LK + ++ K + L + Sbjct: 687 RKHSAGCFVISQSILDL--NRFGAVGEVIFNNSAYKFYLK--SDDYEKAHNLKLLDYDNF 742 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 ++ K +S + RL +DP S Y+SDG + ++ GL Sbjct: 743 TMALLKSVTTNKPN-YSEIFMHTPFGKGLGRLVLDPFSYYAYTSDGEEVAEIESMVDGGL 801 Query: 841 SIHEAVWQLAWKK 853 S +A+ ++ K Sbjct: 802 SYADAIRKMVAKY 814 >UniRef50_Q1RJF1 Conjugative transfer protein TraC n=35 Tax=Rickettsieae RepID=Q1RJF1_RICBR Length = 862 Score = 531 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 197/870 (22%), Positives = 379/870 (43%), Gaps = 99/870 (11%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRT--KLPRGIP 95 + ++ Y Y++ES LF N ++GF+L P+ G + + L++ LP G Sbjct: 31 ERLAKHFVYESYDEESSLFFNRASVGFVLLGWPLVGTSLQAQGEIAEFLKSDENLPAGSS 90 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 I ++ S + + ++ Q R I + + T+F L + + Sbjct: 91 FQILMIGSDHIREYLDNW---------QLHRKGTIFAE--LSSRRTKF-LEQKAKAEGNI 138 Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINH 215 + + IS P+ DI EM ++++ + + + T V+A + V +I Sbjct: 139 KDVVLLISVTIPTLT---IDINEMIRRREVLQDTFKSIGLATYNVEATLLLKFVR-LIFG 194 Query: 216 NPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNP 275 + +P +L+PY L+ Q + +F L + DY++L + ++ + P Sbjct: 195 WREEEHP---ELNPYEILSEQILPGNFSLYEKEDYVSLNDNQ-------IFISLEAGKRP 244 Query: 276 EIAFLWNMADNYSNLLNPELSISCPFILTLTLVV-EDQVKTHSEANLKYMDLEKKSKTSY 334 L M N L + I F++ L + +QV + A K LE+ Sbjct: 245 AEWLLSAMDLFLGNELRRDEYIRSNFLIHFGLQIVPNQVIAKTAAITKREALERNINAGM 304 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 K+FP++ EA++ L SG VV+ LN+ + D A + R++ Sbjct: 305 GKFFPNLASEAQDLAGAVACLQSGDR-VVNIHLNVIMW--DKKNKAKGAASQFCSQLRRS 361 Query: 395 GFELISPRFNHMRNFLTCLPFMA----------------------GKGLFKQLKEAGVVQ 432 G+ + +++H+ L LP +G+ L G Sbjct: 362 GWYFVPCKYDHLAVVLASLPMQLVEAAPNSLVGKFNRFNNIFNKKTRGVGIALSNLGRGI 421 Query: 433 RAESFNVANLMPLVADNPL--TPAGLLAPTYRNQLAFIDIFFRGM-----------NNTN 479 + + L+P++ + + G+L R Q+ + F + N N Sbjct: 422 KTIASESKVLLPIIGEWKGDLSSPGMLLTGRRGQIMYWSPFGSALIGSNLYSTAATPNEN 481 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TL 536 +N+ + G G+GK+ +Q L+ SVL +GG V D G +K C +GG Y++ + + Sbjct: 482 FNLCIAGVPGSGKSVFMQELMLSVLGTGGKVFVLDYGRSFKRTCLLLGGNYIEFDVKNPI 541 Query: 537 RFNPFANIT------DIDQSAERVR---DQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 NPF+ I I+ A+ + L+ MA+P +++ + +L +A+ A W K Sbjct: 542 SINPFSEIPADGSEGSIEAQADFLASFPSILATMAAPQYGTNDLQQPMLQKALIAVWQEK 601 Query: 588 ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 N+ I D+ D+L + S E+ +L +T +G YG++F+ + L Sbjct: 602 GNKVEITDIADWLLKREE-----------SYAQELGNMLFPFTRDGQYGKFFSG-KAKLS 649 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH 707 +A +VV+E L P+LL ++ +I++I M + R L +IDE W+LL K Sbjct: 650 LNADIVVIETDHLRSSPALLAVIVQIMIVHINQSMVKGDRKRPFLIMIDEAWKLLSGK-- 707 Query: 708 KVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA 767 + GEFIE+ R AR++ G+ TQ + D+ ++ S+A +A + NSS+K+ILKQ+ + F Sbjct: 708 RSGEFIEEAGRIARKYNGSITLATQQLTDYFREEGSAAEKA-FENSSHKVILKQNPESFK 766 Query: 768 KYN---QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH-RLFVDPLSRAMYS 823 +L + +++ + +S + + + RL +DP + + S Sbjct: 767 AMRASPKLAGFVDEDWKLNLLQSIHS-NPPHYSEAAIYGPSVNGVVARLMLDPFTLMLTS 825 Query: 824 SDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 ++ D++ ++ + G+S+ +A+ + ++ Sbjct: 826 TNARDYQAIEDRMIAGMSVTDAINNILDER 855 >UniRef50_Q4HPB0 Conjugative transposon protein TraG, putative n=4 Tax=Campylobacterales RepID=Q4HPB0_CAMUP Length = 837 Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 190/872 (21%), Positives = 357/872 (40%), Gaps = 73/872 (8%) Query: 13 NSLVTALKLP--DESAKANEVLGE-MSFPQFSRLLPYRDYNQESGLFMN-DTTMGFMLEA 68 ++ + +K P D S+ + + + +FS LPY Y+ + ++N D + G + Sbjct: 8 SNQINQIKEPFEDISSLQTNIWEQNLKRYKFSDFLPYMSYDDKEKYYINNDNSYGAIFIC 67 Query: 69 IPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYG-----LREFSWSGEQ 123 P ++ ++ +L KLP + + L + + ++EY R + + Sbjct: 68 SPRIMMGDTTATTIEEILS-KLPDDMFIQFTLFGLKNINQKLEYYRSIHKQRAYKENNTL 126 Query: 124 AER-FNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENL 182 + + +T YY K + L+ Y + IS S K + Sbjct: 127 LHKAVDEMTEFYYTKTKESPSTTMTS-----YLKDYYLLISLKSDKKDD-------ILTF 174 Query: 183 VKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSF 242 +R L + Q ++ ++ E+ N N + R D Y LN Q + Sbjct: 175 KLTLRNILSSNKFSPQPLEPSVLKPMLWEIFNPNHNLRDIPR--YDEYCYLNRQLIHADT 232 Query: 243 DLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN-MADNYSNLLNPELSISCPF 301 + + DY+ E + + ++ + ++ + DN S L+ F Sbjct: 233 AICIHDDYM-----ECDKKTYISLIPQSFPNSANLSEFGEKLGDNISRTLDTNQFKDTFF 287 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 I + + + N + +K S+T + K+ +E EL R+ + S Sbjct: 288 ITCSAMRLPKKRAKQVSKNHTIILSQKFSETFFRKF----AAVREESVELLDRIDLRKES 343 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNG----FELISPRFNHMRNFLTCLPFMA 417 + ++ +N+ +N E A + + I++ + K G L H NF+ LP Sbjct: 344 LYAFDMNVII-SGENYEEAEKNARSIISYWNKGGEHKALILCEALGIHQLNFIASLPMGI 402 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNN 477 K + + S ++ +PL AD ++ + R Q+A +D+F +N Sbjct: 403 NKEYVFDI--TAKYRSMFSDQISQFIPLEADYKGVEPNIILFSRRAQIAGLDLF---SSN 457 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR 537 TNYN + TSGAGK+ L+ L + G + D + + LCE + G Y+ + L+ Sbjct: 458 TNYNAYLVATSGAGKSVLLNMLAFNSYARGDRVFIIDQDNSFLKLCETIDGQYVALDPLK 517 Query: 538 ---FNPFANITDIDQSAERVRDQLSVM----ASPNGNLDEVHEGLLLQAV----RASWLA 586 FNPF++I + Q E + +++ +S N + + HE L+ A+ R + Sbjct: 518 PMSFNPFSDIQNEAQLIEELEYLSALIYMLGSSKNESESKKHEKLVKNALQDLLRELFKE 577 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 K N I D+ + + D R + L + G Y ++ + + Sbjct: 578 KGNALEITDIKEAFIKSEDI-----------RFKDFANQLGTFCKGGIYEKFLSG-KCEF 625 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFK 705 + +V E GLE L ++ LI +I MY +P RN K ++DE R L K Sbjct: 626 NIKKEFIVSEFKGLEGHDDLRDPLIMLLIYHINQLMYMSPDRNSKIQIIVDEAHRFLG-K 684 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA---AWGNSSYKIILKQS 762 N K+ +FIE+ YR AR++ G+ I TQ D + K +RA NS++KI +KQ+ Sbjct: 685 NPKMDDFIEQLYRRARKYGGSAILATQGFDDIYNAKEGGLSRAGITIVNNSAWKIFMKQT 744 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 + + ++M+ K ++ +F++ E+ +RL +D + Sbjct: 745 ETSVNMLLKSEVFNLNEIDKEMLRSISTTKGEYSEAFIMTPEDVKLPYRLVMDRYFYYLT 804 Query: 823 SSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 ++D D +++ GLS+ EA+ QL ++ Sbjct: 805 TTDPKDKAKIKELTDSGLSLEEAISQLIQREK 836 >UniRef50_Q19NS3 TrhC n=11 Tax=Enterobacteriaceae RepID=Q19NS3_ECOK1 Length = 893 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 178/904 (19%), Positives = 331/904 (36%), Gaps = 107/904 (11%) Query: 38 PQFSRLLPYRDYNQ--ESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 Q +P Y+Q + F ++ +GFM P G ++ + L M + P Sbjct: 14 HQLGGFIP--VYDQLAGTHYFLIDGNRLGFMFICNPSPGVFDNQQDVLAEMFKMDFPTDT 71 Query: 95 PLCIHLMSSQLV-----GDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGM 149 I L + + G R +A+ N YY ++ Sbjct: 72 VCQISLTALPDLTLQLSAWSAVRGGRMTGNDKLKADLLNGYQLDYYDRSMHKPLKP---D 128 Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEME--NLVKIIRASLQGASITTQTVDAQAFID 207 + L LR ++V+IS P + ++ +L + + L + VDA+ ++ Sbjct: 129 HDNLMLRDFQVWISLSIPLQSALPTELEHSRIDSLYSELVSKLITIGLHPFKVDAENWLY 188 Query: 208 IVGEMINHNPDSLYPKR-RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 + +++N +S + + ++ LN Q V ++ + + + + Sbjct: 189 CIDKVVNPGKNSRWAEGFIDVNTMKRLNEQVNVPGRKYTVTENHFSSVTQSDDESEHRYF 248 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK-THSEANLKYMD 325 + + PE M + N ++ +I PF++T T+ D +K + K + Sbjct: 249 KQLSVVKFPEYVNFGCMYELVVNWMHGRKTIFSPFMITQTVQFADPLKLSKENVRYKAIT 308 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 ++ S S + P + ++ + + L G ++ +L T + N Sbjct: 309 NKQASIPSVVTFCPRLRDMDNDYMAVTRELEDGAK-LLRGYLTFTVMGSNANSVQT-AAN 366 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 D+ + + ++ ++ F +F++CLP L + VV A++ P+ Sbjct: 367 DLKSFYLESRVKVADDSFIVFPSFMSCLPMCNDPKTIFDLDRSEVVSNT---GAAHMTPI 423 Query: 446 VADNPLT--PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV 503 L + QL +DIF + YNM + TSGAGK+ LI + Sbjct: 424 FGPWKGNTDRPVLSLVSREGQLMGLDIFKTSAS---YNMVIGATSGAGKSFWTAYLINNY 480 Query: 504 LDSG----------------------------GFAVVFDMGDGYKSLCENM-GGVYLDGE 534 L +G V D+G Y+ + E ++D Sbjct: 481 LGAGPRSNNLVHYRSTFKHFLENEYPDDDPDGAQVFVVDVGRSYQGIAEQYTNSQFIDFG 540 Query: 535 TL---RFNPFANITDIDQSAE--------------------------RVRDQLSVMASPN 565 NPFA +TDI + + V +QL +MAS Sbjct: 541 KTPDFTLNPFAFLTDITVNDDVFNEAPEFTGESTSNDAEKDKVAQTIMVLNQLKIMASEK 600 Query: 566 GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVL 625 G +D+ + ++LQ + + R + F E R+ ++ Sbjct: 601 GLIDDYQQSVMLQLIAEEYQESRKSGRTGSITGFALRCKKHE--------DKRIKDIGEQ 652 Query: 626 LDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT 685 L + G YG F P + D++ +VLEL L+ P L V+ S+I ++ M+ Sbjct: 653 LGAWCEGGIYGHRFTDTLPPINFDSRFIVLELEELKGTPHLQTVVLMSIIQAAQHAMFIK 712 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVG---------EFIEKGYRTARRHTGAYITITQNIVD 736 ++L ++DE W + N F+E +R R+ A I ITQ+ D Sbjct: 713 KDGRRRLFILDEAWEYIRPDNSSGAGNQSNQFFSSFLEAAWRRFRKTNCAGICITQSFED 772 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWF 796 + + SS RA NS +KII+KQ + + + + K + F Sbjct: 773 YFT---SSVGRALTANSPWKIIMKQEKESIEAMKANKYFSTSDAEYERMKNIRTVK-KVF 828 Query: 797 SSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF-VQQKRKEGLSIHEAVWQLAWKKSG 855 S L++ EN RL+VD +++D D + + +E S EA+ L ++ Sbjct: 829 SEMLVRFENFQEICRLYVDRKMELCFTTDSADRSKLWEIQSRENCSYGEAIEILYAQEVA 888 Query: 856 PEMA 859 +A Sbjct: 889 AGLA 892 >UniRef50_C4Z002 Putative inner-membrane protein TraC n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z002_9RICK Length = 925 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 178/917 (19%), Positives = 345/917 (37%), Gaps = 100/917 (10%) Query: 27 KANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM-GFMLEAIPINGANESIVEALDHM 85 N LG + F L Y+ Y G+F ND + GF+ E G+NE + + L+ Sbjct: 33 LENNFLGAVPLKDF---LHYKSYVAGIGIFFNDDGIAGFLTEISMRVGSNELLEKNLNLF 89 Query: 86 LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL 145 ++P G+ + ++ S + D+ + + R +++ A Sbjct: 90 FNNEIPEGVYMQFLVVGSNNIEDKFSLWKKGRIAHNDPMLDRITKYREAFLRERARDIGN 149 Query: 146 PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 +G R ++ ++S + + + + + + + T++ D Sbjct: 150 SDGR----IGRDWKTYVSCSMRGVDGNNSKLELLVKFKEKLLKKFISIKLNTRSCDVADL 205 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFD----LKVRADYLTLGLRE---- 257 +V +++N L + R +D S N +++ + L +D + G+ E Sbjct: 206 KYLVNDLVNMQLTPLSSQER-VDTNSSDNSSHTKNNANKHNLLDRLSDQILEGINEASIT 264 Query: 258 ----NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 + ++L + PE + +M +LL P+L P L ++ + + + Sbjct: 265 EEEIKHLKTDLVTRGYYLKKLPESFGINDMV----SLLGPDLEGGFPARLIISYSIANNI 320 Query: 314 KTHSEANLKYM--DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 E + S+ Y + S++ EAK W L R +G+ + F Sbjct: 321 NKADEGKIISEGLRSIHASEKWYTRHDISLQNEAKWWKVLIDRNKNGEKFLTENFQIFIT 380 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 K+ E A E +L+ + F+L H+ L+ LP +K LK +V Sbjct: 381 TTKNAVEIAEE---KLLSHYNSLDFQLARNDKLHLVGLLSILPMQ-QAAFWKSLKFFQLV 436 Query: 432 QRAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 + + V +P+ + +G+L + ++ + F+R NYN+ V SG+ Sbjct: 437 KNVPASEVVAKLPIHGEWKGINRSGVLLLGRKGEMFNWNPFYRVGGAGNYNVCVMAPSGS 496 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG----VYLDGETLRFNPFANI-- 544 GK+ +Q L S++ V D+G Y+++ E + + L NPF I Sbjct: 497 GKSFFLQELATSLVTQNVQVFVLDIGASYQNIAEGLNNSEFLRFNALNDLSLNPFHGIIG 556 Query: 545 ------------------TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL--------- 577 I Q + L ++ S N + + Sbjct: 557 SGAVYLEAQKLKREGKSKDAIMQRTGLTSEGLEILFSDNNKQEIAENETIEVLKIGEHFV 616 Query: 578 --QAV------------------RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 AV + + + K I D L D Sbjct: 617 TKDAVIYAKTTIATMCGVSGDNTKEAIIEKGLNEGIKQYGDCL--NLDKYARVLEEMENG 674 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 E+ + L YT++G +G+YF + + + ++ + + E ++ L ++ +++ Sbjct: 675 MGRELAISLYPYTSSGVHGRYFRQGK-NAKFNSPLTIFEFEEIKGDEVFLSVILGIVLMQ 733 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 I + R+ + + ++DE WR++D F+E RT R++ G+ IT Q DF Sbjct: 734 ITMQFLCGDRSKRFVLIVDEAWRIIDHSVG----FLEAFARTVRKYGGSLITCVQEFKDF 789 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 D+ +A NSS+ +L+Q A Q+ + +I + +S Sbjct: 790 DN---GPKHQAILNNSSWTAVLRQEP---AGIGQMRHSEKFKNCTSLIETITKDPENKYS 843 Query: 798 SFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPE 857 +L N RL VDP S +YS++ D+ F+ Q + GL A+ +L +K G + Sbjct: 844 EIMLMGSNLRVIGRLVVDPYSECLYSTESEDYGFLHQCKNNGLDKDTAIRELIKRK-GKK 902 Query: 858 MASLEAWLEEHEKYRSV 874 + + E+ YRS Sbjct: 903 LPEFKIEYEQ-VAYRST 918 >UniRef50_D0Z4T2 IncF plasmid conjugative transfer pilus assembly protein TraC n=4 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T2_LISDA Length = 692 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 175/691 (25%), Positives = 299/691 (43%), Gaps = 54/691 (7%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPL-- 96 + LPYR Y+ ESGLF N +T+GF + + GAN+ +V AL+ ++ +LP G Sbjct: 23 HMHQELPYRYYDDESGLFENQSTLGFGKKLNVLGGANDELVAALNELV-MRLPEGKNWDF 81 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 L VG I+ + S G E+ Y AA + G + L+ Sbjct: 82 QFVLTGDNQVGHIIDSNYEQASVRGGIVEKIAQNQAIYAHYAARNGYNTKLGPSYRFDLK 141 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN 216 +Y S+AD + +L + + I Q ++ ID V + +N N Sbjct: 142 NYNASFFCT------SKADRETVSDLKTTLDYAFVQTGIDHQPIEPHDLIDNVSQALNFN 195 Query: 217 PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT--LGLRENGRNSTARILNFHLARN 274 PKR + L+ Q +E + + Y+ + R++NF L R Sbjct: 196 SARNTPKRPHYNEDELLHSQMLELDSEFLIHKKYIESRCSFAHQDEVAHTRVINFTLRRL 255 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 P L++ ++ ++L N ++ CPF ++ +E K + K +L K + + Sbjct: 256 PSEFRLYSFSNCLASLRNAANALRCPFRISCNFQIEPTGKEKVKNEGKIRNLSKWAHSPM 315 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 A + P+ +KE +E EL+ + + S IT F N E F + Sbjct: 316 AIFIPTAKKELQEREELQDAFLREECKIASMVFTITLFS--NKENMKADMASARGVFSEA 373 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 G ++ + L LPF + ++AG V++ ++ N+ N P+VA+ Sbjct: 374 GLPIVEADMIQGQTLLASLPFNM-IDFYDDCRKAGRVRQIKTSNLVNFFPIVAEYKRIMG 432 Query: 455 GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD 514 G+L PT R+Q+++ D F M+ NYNMA+ G SG+GK+ + Q + RSV + GG + D Sbjct: 433 GMLLPTMRHQISYFDPFN--MSTDNYNMAITGVSGSGKSFITQNIARSVFERGGKVWILD 490 Query: 515 MGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSA----------------------- 551 GD YK + M GVY+ ++ NPF +I ++Q A Sbjct: 491 KGDSYKKFTQTMSGVYMTAGSVFLNPFTHIATVEQKAGISFSEASNLKPSEGHDDDDVHP 550 Query: 552 -----ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 + ++ MA+PN +L++ + L A+ +W + ID V + L Sbjct: 551 LASILGDITGLIASMAAPNTDLNDTLDSALSDAILRAWDRHKQNTLIDHVQEALF----- 605 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 + A+ R+ ++ L++Y +G YG FN L D + +EL G D + Sbjct: 606 -ELAKERDDDRRISDLGHQLNKYCTDGIYGDIFNKP-SQLDPDVHLTTIELEGFTDN--V 661 Query: 667 LVAVMFSLIIYIENRMYR-TPRNLKKLNVID 696 L V+F+L++ I MY R + K+ +I+ Sbjct: 662 LRPVIFALMVSINQAMYLAGERRIPKVCIIE 692 >UniRef50_A0L303 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L303_SHESA Length = 894 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 175/914 (19%), Positives = 338/914 (36%), Gaps = 122/914 (13%) Query: 29 NEVLGEMSFPQFSRLLPYRDY-----NQESGLFMNDTTMGFMLEAIPINGANESIVEALD 83 N + ++S ++P D + G + +G P G S + LD Sbjct: 5 NNWKNSLGIEKYSSIIPILDEFVSEEGEHLGYILEGGYLGVTWLCPPSGGYGASTISTLD 64 Query: 84 HMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA---------Y 134 + + P G L L++S D + L + + RF+ + Y Sbjct: 65 SIFKKVYPEGTVLQFSLVAS----DDLVTVLDNYRHCRGKRNRFDTVIDNDNMTEYMVDY 120 Query: 135 YMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKK--KSRADILEMENLVKIIRASLQG 192 Y A T P + +P LR++ V+ S P KK S ++ + ++ ASLQ Sbjct: 121 YKALADTSIPSRDMEGVP--LRNFEVWASIKVPIKKAMPSTEEVEDFVDMANNHEASLQQ 178 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLD-------PYSDLNYQCVEDSFDLK 245 + + I+ + + N +P++++ + ++D + Q +E ++K Sbjct: 179 IFGVATKMQPEILINRLQMIHNPSPNAVWRRGIKVDGRQGCYRSSQPIRAQLLEPGTEVK 238 Query: 246 VR-ADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL-NPELSISCPFIL 303 V +DY+ + + S I + + P+ + + + L + +I F++ Sbjct: 239 VDGSDYMAIKAEDG---SKRFIQSVSIKEFPDSIYQGTLHLMTGDWLKGDDGAIPGNFMI 295 Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKK-SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 LVVE K ++ K + K+ + +A+W S++ +++ L ++ Sbjct: 296 --NLVVEMSPKKVAKDYSKRRLMAKQIGEGPWARWISSLKYGLQDFEYYEHYLEREKAQH 353 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS--PRFNHMRNFLTCLPFMAGKG 420 + LN + ++ I R GF + +L LP Sbjct: 354 CRFHLNFQMWGPTLKSVKNSTKKLIT---RMEGFSWSAGVDSLIGRFTWLNGLPMCTSSE 410 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLT---PAGLLAPTYRNQLAFIDIFFRGMNN 477 + ++ + S V +P+VA P L QL D ++ Sbjct: 411 VSSFIERFDFL---PSNLVKFFVPMVASWPGNAVRHPVLTYIARDGQLITFDPL---KSD 464 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDS-----------------GGFAVVFDMGDGYK 520 +NYN+ + TSGAGK+ LI +L + GG + D G Y Sbjct: 465 SNYNIFITATSGAGKSVSANYLIEGLLSTGENRYPDALGNIHGDPDGGRVFIIDSGRSYV 524 Query: 521 SLCENMGGVYLDGET---LRFN--PFANITDIDQS-----------------AERVRDQL 558 E G +++ FN PF +I + + E + + L Sbjct: 525 KTTELYAGQFVEVMPDNRFAFNLCPFKSIDESQKDTDEGVVDSDANNYLGAQGEMLLNVL 584 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 +MA P G+ + + + W K IDD D R Sbjct: 585 KLMAFPLGDCNSYQYSAMSVLLMQLWNEKGRETSIDDFADACAKHP-----------REE 633 Query: 619 LDEMIVLLDQYT--ANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 + ++ L + G FN ++P ++ + +VVLEL GL L + I Sbjct: 634 VRQISDQLTPWCYLRGGQNSWMFNPNKPPIQFEKDLVVLELDGLNGSDQLKAVCIMLCIQ 693 Query: 677 YIENRMYRTPR-NLKKLNVIDEGWRLLDFKNH----------KVGEFIEKGYRTARRHTG 725 I+ M+R + ++ K ++DE W L + +F+E G+R R++ Sbjct: 694 RIQQEMFRHDQLHIVKAFILDEAWEFLKENKGVDEQTRQVLQTLAKFLESGWRRFRKYNS 753 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 + I+Q++ D + S A A NS++ L Q+ +E A+ N+ +F+ ++ Sbjct: 754 LGVCISQSMKDANE---SPAGIAMASNSAHLFYLMQNGEELARLNK--EGKFIEQDYLLL 808 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKR-KEGLSIHE 844 + +FS LL S RL++ YS+ + + ++ +G+ + Sbjct: 809 RNIKTVR-PFFSEVLLCSGGTKSVGRLYLPRAKALTYSTAPDEKKQIEIMMKDKGVDMFT 867 Query: 845 AVWQLAWKKSGPEM 858 A Q+ ++ G ++ Sbjct: 868 A-CQMIAEREGKDL 880 >UniRef50_B0RL05 Type IV secretory pathway VirB4 component n=2 Tax=Yersinia RepID=B0RL05_YEREN Length = 857 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 159/859 (18%), Positives = 320/859 (37%), Gaps = 58/859 (6%) Query: 27 KANEVLGEMSFPQFSRLLPYRDYNQE----------SGLFMN-DTTMGFMLEAIPINGAN 75 A+ +L S LP+ Y +E S F N D T+G++ E P+ Sbjct: 20 TADNILDLNDRDSLSSFLPFVSYKEEIETESGEKIKSKAFFNIDNTIGWIWELTPLPFVG 79 Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E + L ++++T P+G L + D ++ G+ N + Y Sbjct: 80 EDQLGKLHNIVKTHYPKGTVAQWILYPDHNIDDILDEY-AACRVQGDPITDMNVRNTSQY 138 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 ++ A P+ +P +R++RVF + + + E+L+ I A + Sbjct: 139 LRNGAENGIHPQMNGIP--VRNFRVFYTIK--------CEEMIREDLLSSIEQIFDTAGM 188 Query: 196 TTQTVDAQAFIDIVGEMI-----NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 + + A I + E D P +Q+ + ++ + D+ Sbjct: 189 APRRIGATELIRWMSEFFCGKKFTGEYDPERPLAKQMMSNDPAYDRSFDNGGHHEALQDF 248 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 R T N ++ + Y +++ I PF+ TLT++ + Sbjct: 249 SVTPNILGHRYGTCLFPNVIPQKDNNPLRTNELFGGYKGVIDDRGQIKYPFLYTLTIIYD 308 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 + ++ K + A ++++ E+ +++Q L G +YF+ Sbjct: 309 E---LQTDIANKASQTMFQRVG--AGLVFALKERINEFSQMQQTLAQGGDF--AYFIPQL 361 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 + + + + + FEL+ +LT LPF + LK Sbjct: 362 WVFGKTKKDVRAAVSEAKDLWGNHKFELMPETNMSKVMYLTALPFGF-YNIDSNLKNMDR 420 Query: 431 VQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSG 489 A+ N+A +P+ D + Q+ +D+F + +N ++N V +G Sbjct: 421 FFYADYENIARFLPVQGDFRGGGKPVQTYIGRKGQIIGLDMFDKRVN--SHNFYVVAETG 478 Query: 490 AGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI-- 544 GK+ L+ L+ S G + D+G YK L G Y+D + + NP I Sbjct: 479 GGKSFLLNDLLDSYASCGAKIRITDLGASYKKLTHIRKGRYIDFALDKPMCMNPSDFIAK 538 Query: 545 --TDIDQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 D++Q+ S A + EV LL QA AS + +DD++ +L Sbjct: 539 DAEDLEQNIAAAVLIYSSCAYSFTGQTVTEVEANLLDQACHASHRKGNQESGVDDIIAYL 598 Query: 601 KNASDSEQ----YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLE 656 ++ + A + I ++ + LL+ + +NG + ++F + V ++ Sbjct: 599 RSGEWKKGQEISVAAAQEIENQAQRLAFLLNNFGSNGQFKKFFVGKSEFSISQDEFVCVD 658 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN----HKVGEF 712 L L+ + L ++ ++ + +Y + R+ K + +E ++ + + Sbjct: 659 LEKLKSQKQLFFPMIMQVMNAMTQDLYLSDRSQKSFILFEEIASMVKQQGNISMDGLASM 718 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 +E+GYR AR++ GA+ + Q+ + D + A N+ +K L+ A + Sbjct: 719 VEEGYRRARKYLGAFGIVLQSPL--DLLLLKGLGQVAQANAPFKYYLESKMYAEAVSKGV 776 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFV 832 P ++ A+ + + + RL VD + +SDG D Sbjct: 777 LPGIKGGFPLTLLESVKNARPR-YGEVFIDSPLGMGVARLCVDKWRYWINTSDGDDVAQY 835 Query: 833 QQKRKEGLSIHEAVWQLAW 851 + G +A+ QL+ Sbjct: 836 NTLIQRGFQPVDALRQLSG 854 >UniRef50_B7J837 Type-IV secretion system protein TraC n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J837_ACIF2 Length = 866 Score = 470 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 152/855 (17%), Positives = 317/855 (37%), Gaps = 56/855 (6%) Query: 42 RLLPYRDYNQESGL-FMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHL 100 P+ +++ L FM +G +L + GA+ES+V+ L L P G + Sbjct: 19 DFFPWLAVDEKKKLIFMERGYVGAILMCNTLYGADESVVQELSSALSIDFPAGTIIQAVN 78 Query: 101 MSSQLVGDRIEYGLREFSWSGE-------QAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 + D +E L + + Q N + A Q + + Sbjct: 79 WNVPDSMDILERFLDRRRGNSDDKGLSDQQKTLINGTAENIHRYFEAAQNRNRVFQDSGV 138 Query: 154 TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI-TTQTVDAQAFIDIVGEM 212 L VF + P + D ++M + + I + ++ + VD + + M Sbjct: 139 PLTKNLVFFAIKIPVAEFPTDDEIDMVD--EKIGSFASTINMMSPYRVDHHIALSLWRRM 196 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 ++ + + D + L Q ++ YL++ + ++ I + Sbjct: 197 LHLRHE----WEEEFDENALLRDQITGPGDAIEDHESYLSVDHGDGEKD---YISVLSIK 249 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 + + L ++ P L T+ + DQVK + + +S Sbjct: 250 EFSRPINMLATNFLMGDPLGRGTQLTLPAALVWTINIPDQVKKRRAITNESTLINWQSGK 309 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 W P + + + L + + +G +++ + D +T ++ Sbjct: 310 RMMSWSPKLRLKKEGIDFLMEAINTGDNAL-EMAFTALLWGPD-AKTVKNASGSFISHAA 367 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 K GF ++ + + FL +P + V + P+++D Sbjct: 368 KAGFVMLPDKQIALPMFLNAMPLFPDRESMAMTFRYKSVGTTHAVAAC---PVISDWQGN 424 Query: 453 P----------AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS 502 +G L + R L DIF +N+ +N + G + +GK+ Q L+ Sbjct: 425 NMEDSRLSPACSGTLLVSRRGHLMVFDIF---ASNSGHNFVLAGMTRSGKSVTAQQLVMD 481 Query: 503 VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQSAERVRDQLS 559 L G V ++G ++ LC+ GG ++D + NPF + +D + + Sbjct: 482 QLSVGAQVWVIEVGRSFEKLCKLFGGDHIDLRPEMDVGLNPFTVVGVLDDEISELTAIIG 541 Query: 560 VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 M SP G L + + A+R+ + A DV +L ++ R Sbjct: 542 TMISPRGELSDEDLSTVAMAIRSVYGKAGREATPTDVQAYLVAQDNN----------PRA 591 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 M +++++T NG +G++FN+ + ++ V LEL L+ RP +++ V+ ++ I Sbjct: 592 IAMGKMMNEFTLNGAHGRWFNAPMNVSLNGSRFVNLELMELQRRPQVMLVVLMQMMFAIG 651 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 + +++ +DE LL+ + +F+E R +H GA Q + D Sbjct: 652 KEISSATDKRRRILFVDEASVLLEIQT--ALDFLEGLARRVAKHQGALGIGIQALSDLYK 709 Query: 740 DKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSF 799 ++ + R +++ ++++Q+A A+ P M+ K+ ++ Sbjct: 710 NEKT---RTISAQTAHFLVMRQNADSVAQLENNKQFVIGPSGLAMMKTVRKTKE--YAET 764 Query: 800 LLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMA 859 L E + RL +DP R ++++DGP+ E V + + G+ A+ Q + Sbjct: 765 FLYSEESMAIGRLKLDPYRRVLFATDGPEKEEVVEAMRNGVDPDAAIRQFLAQHPEFSTG 824 Query: 860 SLEAWLEEHEKYRSV 874 + + E Sbjct: 825 EYSGEILDSEDAEEA 839 >UniRef50_Q1NGT3 Sex pilus assembly protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT3_9SPHN Length = 839 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 166/856 (19%), Positives = 308/856 (35%), Gaps = 64/856 (7%) Query: 21 LPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMN-DTTMGFMLEAIPINGANESIV 79 + +S +S LP + +E F+ D G E +P + Sbjct: 7 RHGGGMTFERLRQSVSRDAYSDFLPMVAWVEEEDAFLCIDDGWGQAWELVPSAYLFAHVH 66 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAA 139 +AL +L G + +H + L+ D ++ L S + TR Y++ Sbjct: 67 QALLGLLNIHFAPGTVVQLHCFADPLIDDALDAFLDLKSRPDPLIQASARRTRD-YLREG 125 Query: 140 ATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQT 199 G + LR++R+ +S + + +L + I L I Sbjct: 126 TQGLDALHG----IPLRNFRLLLSIKTRKPLGA--------DLRRQIEEQLSKLGIA--R 171 Query: 200 VDAQAFIDIVGEMINHNPDS---LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR 256 + +A + + N + ++ + + P + Q ++ DL L LG Sbjct: 172 LAPEALVTFYRRIFNGVFSAAPGVFAQGSEDMPARPVRKQLIDAGPDLVFDGPELFLG-- 229 Query: 257 ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTH 316 + AR + I PF+ TL ++ D Sbjct: 230 ---DQVARCLTPKSPARRVTAERCNRLLGGMRGASEDSDQIGGPFLYTLNILF-DHSSFE 285 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 + + +K + + + V K+ +E G + +G S VS I F +D+ Sbjct: 286 IHKRAQILSAQKAAGS----FAVEVGKQIEEIGWVLD--EAGNSRFVSVIPVIWVFGRDS 339 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLT--CLPFMAGKGLFKQLKEAGVVQR- 433 + A E+ + + ++L LP G + + +++R Sbjct: 340 AQ-AREMAARAKRLWESEPLPWM----MQEESYLNPVLLPMALPFGFYPDRRTVRMLERD 394 Query: 434 --AESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 + A L P+ D LL + QL +D+F +N NYN V SGA Sbjct: 395 LPMPAKAAALLAPVQTDFRGGGRPALLYAGRKGQLITLDLFDPRIN--NYNFIVSAESGA 452 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFAN--ITD 546 GK+ L+ L + G + D+G Y LC G Y+D E L NPF D Sbjct: 453 GKSFLLNNLCQQYYAQGALIRIIDIGGSYAKLCTLCSGRYIDIGEEHLVLNPFDMGFALD 512 Query: 547 IDQSAERVRDQLSVMASP-----NGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 D + ++++A + LL AV+ + + A ID V D+L Sbjct: 513 GDDRQSAISMAVAIVAEMAHAATRKGVSTSEWNLLKSAVQWTIDSGRAEAGIDAVRDWLG 572 Query: 602 NASDS--EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 + + E+ L + ++G YG YFN + VVLEL Sbjct: 573 AYPAYATSDLDKVDHLIPAARELAFNLRDFASSGAYGHYFNGPSTFDISADEFVVLELER 632 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK----VGEFIEK 715 L+ P L ++ ++ + +Y + R+ + + DE + + + + + E + Sbjct: 633 LKAMPDLFNVIVMVVVNAVTQELYLSARDRPRFVLCDEAAQFMTRTDGQDLSRLAEVFGQ 692 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 GYR AR++ G++ + Q++ D + N++ + +L+ S + A N++ Sbjct: 693 GYRRARKYQGSFGVVLQSMNDLL--LFGGIGQVILENAATRFLLQGSTYDRAVENKIL-- 748 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQK 835 + D++ K +S + RL VDP S + +S + + + Sbjct: 749 DYSGFVLDLLKSVRNNK-PHYSEVFIDSPLGLGIARLVVDPFSYWINTSAPQEVAAFEAR 807 Query: 836 RKEGLSIHEAVWQLAW 851 + G S EA+ LA Sbjct: 808 LRSGRSPLEAICDLAG 823 >UniRef50_A9AU11 Type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU11_BURM1 Length = 860 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 170/861 (19%), Positives = 311/861 (36%), Gaps = 67/861 (7%) Query: 41 SRLLPYRDYNQESGLFM------NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 S +L Y +S L + +G + P+ G + ++ + +P Sbjct: 14 SDILNIETYTSDSNLVISKAPGAERPLIGAVYRMSPLAGGGGEFSTVVQNVFK-AVPDQS 72 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + + L+ D + L+ + G + Y + A+ E +LP Sbjct: 73 VIQVTLVIHPD-HDAPDTYLKGKLYGGPVVQDLIKRQADLYRRGLASG----ELPDLPGI 127 Query: 155 LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT-TQTVDAQAFIDIVGEMI 213 + V++S P +K + + +L + +++G ++ + + ++ Sbjct: 128 NKRT-VYVSLAVPHRKADDEAVEKSASLQQEFFTNMRGCGFHDVVQLNINQLVGVYRQIT 186 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLAR 273 N + P +LDP DL YQ R ++ N + + Sbjct: 187 NIYEPATVP---ELDPTLDLRYQVFGPDQTFDFRDPHV------GEINGNTYCTTVTVKK 237 Query: 274 NPEIAFLWNMADNYSNLLN-------PELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 PE F M N I P I+T T+ V +Q + + Sbjct: 238 YPERPFHGIMNLLSGAPFNSGSVREGGGQRIEGPCIITTTVRVANQRREWTRVESAIRSR 297 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 + + + E++++ + V N F +D +E A+ Sbjct: 298 RQHQPLPIKLGVEDTPRVLADLEEIKRQCAEDGTKFVYVSTNAFLFGRDRDE-AVRAGAS 356 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + + K GF+ + LP + L S V L+P+ Sbjct: 357 VKGTLDKLGFDGRDVVATGLVRLAQTLPLNFSNTIADDL---AGEATMASSEVGCLLPVY 413 Query: 447 ADNPLTP------AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI 500 D G+ PT R + + D + ++N+N+N + SG GK+ +Q I Sbjct: 414 GDYLGNVNSDFPLTGMAYPTRRGTMHYFDPY---VSNSNFNGVMAAESGVGKSFSLQAKI 470 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR-----FNPFANITDI--DQSAER 553 + L G V+FD G C +GG Y + + PF+N+TD D+ E Sbjct: 471 TAELAEGDNIVLFDNGRSSLKFCALIGGEYNEFGGAKAWRPSLQPFSNLTDEEFDEQQET 530 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE-S 612 + +MA D L +AV+A+W + A + + L+ +S + Sbjct: 531 ITSLHMLMAYDEEKPDPGARIALSEAVKAAWGQRGKDAEVSTTIACLQAIVESAAENQIQ 590 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 + +I L + + T G YF L A+ V EL GL D L V+F Sbjct: 591 NQVHVAAANLIPRLKAFVDSPTRGPYFRGPST-LDPKAQFTVFELAGLGDDNHLKRVVLF 649 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 + + +R+ + +K +DE L + + E Y R++ + I Q Sbjct: 650 CCVNILLSRIKKF--KGRKRIYVDEAQDLFSIDS--AADAFEGLYLKGRKNGVSVWVIVQ 705 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF-AKYNQLYPDQFL--PLQRDMIGKFG 789 +++ S KA S S++K+I+ Q E A +Q F P + +I Sbjct: 706 SLLKLASFKAGSV---ILRQSAWKMIMAQKKDEIDAVIDQKVMTAFADDPYFQKLIKSVE 762 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 + K+ W S L+ + RL+VD + ++SS+G + V Q +EG+ EAV ++ Sbjct: 763 SKKNFW-SEILIMSDKTYEVVRLYVDKFTATLFSSEGAARDDVLQMMEEGVGPLEAVRKV 821 Query: 850 AWKKSGPEMASLEAWLEEHEK 870 G + A W+ E Sbjct: 822 M----GDKKARRREWMSEFLD 838 >UniRef50_C0QUW6 Type-IV secretion system protein TraC n=1 Tax=Persephonella marina EX-H1 RepID=C0QUW6_PERMH Length = 926 Score = 431 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 175/839 (20%), Positives = 329/839 (39%), Gaps = 67/839 (7%) Query: 51 QESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRI 110 ++ +F+ GF + EA + L P G + SS + + Sbjct: 43 EKDNIFLTKEGFGFAFYLTLPAFLGQRQEEAFETFLNHDYPDGTVINFMAFSSSNIKPFL 102 Query: 111 EYGLREFSWSGEQAE-----RFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY-RVFISY 164 +Y +E S + ++ R Y+ A + P + + V I + Sbjct: 103 DYWEQEHSAENVDIDNPGILKYIIKKRKEYLLNAVNNSFWEDVEAKPRIIYNIMSVHIPF 162 Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 S + R + L IR +++ +A + I E++N + Sbjct: 163 ESDNPDVVRIQFRRIRKLANRIREAIRAEGFGCDFANADMMLAIYKEILNPELQGAIKYQ 222 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 + LD N Q ++ + L++ L L F ++ P LW + Sbjct: 223 KGLD----FNRQVLDRNTTLRLVGG-LESDLEVANDEKKKYWRGFWFSQYPNEMTLWKFS 277 Query: 285 DNY--SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS-KTSYAKWFPSV 341 + + NP I F + + + VED K ++ K + ++ ++ K+ +A+W P + Sbjct: 278 NILFPYDDTNPSPIIPTDFFMCMQVKVEDIEKRQTKITAKAIQMQDQAEKSEFARWIPKI 337 Query: 342 EKEAKEWGELRQRLGSGQSSV-VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS 400 ++ + +++ + G+ S +L I+A DN E ++ + F F+L Sbjct: 338 KRRGEYAKYIKEVIEDGKVPYSASMYLFISA---DNPEHLDDIASGAVQRFVSKKFKLAR 394 Query: 401 PRFNHMRNFLT-CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL-LA 458 + N L CLP K + N+A+LMP + + + L Sbjct: 395 EIDASLFNVLMECLPLNQIKEREEFFIN---YSTLFDANIASLMPFQGTSLGSKRPITLY 451 Query: 459 PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDG 518 + L D F ++TN+N+ SG GK+ L +G V D+G Sbjct: 452 LDRKYSLWGFDPF---HSDTNFNIVKIAASGGGKSFSENDFHVLNLSAGRKIRVIDIGWS 508 Query: 519 YKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSV--------------- 560 YK LC +GG Y+ D FNPF +I + D+ D+L+V Sbjct: 509 YKPLCSLLGGEYIELDDERNPCFNPFTHIIE-DEKGNIHEDELAVLIPFVGLLAGLDLNP 567 Query: 561 --MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 + S NL + + +A+ ++ + N+ + +VV+ L+ D + Sbjct: 568 EALISNEDNLMARYCSFIARAITNAYKSYGNKTGLKEVVEELQKLEDDTG-------DNI 620 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIY 677 ++ L ++ ++G Y +YFN E ++ VVLEL +E+ P L A+++SLI+ Sbjct: 621 PQKLSQALYEF-SHGHYARYFNG-ENNIHYSKDYVVLELEQIENKDPRLKQAILYSLILR 678 Query: 678 IENRMYRTPRNL---KKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 I + +K V+DE W +L + K G F+E R R++ + + ITQ I Sbjct: 679 IFREFFLAHLRKDYSRKFLVVDEAWSIL--RESKAGYFLETAARRFRKYGCSLVVITQKI 736 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D AS A RA + NS++ +ILK S ++ ++++I + Sbjct: 737 EDLL---ASPATRAIYANSAHLMILKPSEQDIEDAKSEKRLPVSDFEKELILSLTTVPGK 793 Query: 795 WFSSFLLQ-VENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 FS +++ + RL VD S ++++ + + +E + + LA + Sbjct: 794 -FSELIIRNSVLGTVVGRLIVDRYSYWTFTTNDAERRVRTELLEELKNYELVLETLAKR 851 >UniRef50_C1SHE1 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE1_9BACT Length = 771 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 148/770 (19%), Positives = 287/770 (37%), Gaps = 117/770 (15%) Query: 38 PQFSRLLPYRDYNQESG-LFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPL 96 QFS L PY Y++E+ F+ D ++G++ E P+ A+++I + ++R + Sbjct: 26 EQFSSLFPYVSYDEETESYFLRDNSVGWIWECSPVLFADDNIFNQIASVIRGAEAPDTII 85 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQA--------ERFNAITRAYYMKAAATQFPLPEG 148 L + + D+I G + ++ + ++ R + + P Sbjct: 86 QYMLFADPFI-DQIADGYKNLRGRNKEILPIHSQLIDDYSEFIRKHGNRGMWQLSGTP-- 142 Query: 149 MNLPLTLRHYRVFISYCSPSKKK-------SRADILEMENLVKIIRASLQGASITTQTVD 201 LRH+R+FIS P K R +++ + + ++ S++ + ++ Sbjct: 143 ------LRHFRLFISVRIPVKADASTNTGKYRKEVVGHLDYISNVKESMKLFN--PLSMK 194 Query: 202 AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 I ++ ++N PD + K + D ++ Q + +++ + + R G Sbjct: 195 PDRLITMLYRLVN--PDLEHNKTIEWDENIPIHKQILYSDTEVERAKNSIRFNGRRVGIL 252 Query: 262 STARILNF--HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK----T 315 + ++ +L N I ++ N +N + CPFI ++ +V+ +K T Sbjct: 253 TPKKLPREIDNLFANDLIGYVSKGITAAENDIN---QLQCPFIYSVNIVINKNLKSKLQT 309 Query: 316 HSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV-VSYFLNITAFCK 374 + N K + K + + +E + QR G+ V V L I A + Sbjct: 310 KAVQNSKATESANKDGRHFDAFAAGTNNRKQENFYVAQRYEMGERFVHVIPQLMILAESE 369 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMR-NFLTCLPFMAGKGLFKQLKEAGVVQR 433 D + L + I N+ G E + R + F+ LP F+ L ++ Sbjct: 370 DELTSKLNRAKSIWNTC---GVECQTERDYLLHVLFIAGLPCGMYHSNFQDLDRDFIL-- 424 Query: 434 AESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 +S + P+ A + + LL R +L +DI G N N V G +GAGK Sbjct: 425 -DSKGASLFAPVQASFSGVGSPVLLYIDRRGELVSLDILNTG---KNKNAYVTGGTGAGK 480 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF--NPF--------- 541 + + + S + G + + D Y+ C G Y++ + N F Sbjct: 481 SFFMNGFVNSYMSIGAKFRIITVCDSYRKACYMTDGQYIEHDESGMVLNFFEAAGVVKGT 540 Query: 542 ---------------ANITDIDQSAERVRDQL---------------------------- 558 + ++Q ++ + Sbjct: 541 LIQSINHNGVTYPARTKVEILEQGGSEIKILVGDSDVLYVRSENVGSYCIEMDGDTLIML 600 Query: 559 ------SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE-QYAE 611 V + LDE ++ AV + K IDD+ D+L N S+ Q Sbjct: 601 TGILASMVTSRAGSELDEDELTIIENAVSYMFSVKGRETMIDDIHDYLMNISEYHAQDDR 660 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 S R + + L +Y + G YG +FN + ++R + +VV +L + L ++ Sbjct: 661 SKYHRDTAYRLALRLGKYCSGGQYGHFFNG-KSTVRFKSDLVVADLT--KTPVDLRKVIV 717 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 + IE +Y+ R + V+DE W+ L +N F++ T R Sbjct: 718 LAFANIIEQEIYKGDRKTPQFVVLDESWQTLS-ENPYAARFVKGF--TVR 764 >UniRef50_Q2SSU5 Membrane bound ATPase, putative n=1 Tax=Mycoplasma capricolum subsp. capricolum ATCC 27343 RepID=Q2SSU5_MYCCT Length = 955 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 141/771 (18%), Positives = 275/771 (35%), Gaps = 73/771 (9%) Query: 55 LFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHL------MSSQLVGD 108 L T E G + SI+E D L+ KL + + + QL D Sbjct: 109 LISKQNTKNVAFEVN---GIDLSILEDKDVELKIKLYEQFLKSLDVEVYQIKIDKQLQLD 165 Query: 109 RIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPS 168 + E L + + AE+ + Y+ + L + Y VF Sbjct: 166 KYEQWLTQHQQGTKNAEKIKQLDD--YINQIKEK-------ELEYNSKFYLVF------- 209 Query: 169 KKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLD 228 S D ++N +K ++ +T + ++ FI+++ +M + ++ + Sbjct: 210 ---SSKDNQSLQNAIKNLKIFFSKIELTYKQLENFEFINLLKDMYFDFDKDDFTQQDIKE 266 Query: 229 PYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYS 288 +++Y D+ LK++ +Y+ E + + L A +P+I++ ++++ Sbjct: 267 HIDNIDYLLSYDN--LKIKNNYMIFANNEYETYISCKTLK-EYASSPDISWFFDISTERG 323 Query: 289 NLLNPELSISCPFILTLTLVVEDQ-VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 +++ ++ + + Q + + AN+K +K +K + E Sbjct: 324 TVVS-----------RISPLKQQQINRMVNNANIKARVNQKLNKQVKLTDVITEEANIDS 372 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 EL L G + +F D+ E E +I N F L + F Sbjct: 373 IQELAANLKLGNEKLFLISTTFISF-GDSLSDLKENENNIKLELSNNDFVLSNQSFKQFE 431 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRN-QLA 466 F+ P K + Q S+ +AN P V +N +G+ N Sbjct: 432 TFINSFPLGLASN-----KNIVLKQEISSWALANSFPFVDNNWTDISGIYFGDTLNYSPF 486 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGD-GYKSLCEN 525 ID F R N N N V G SG+GK+ ++ L+ +G ++FD + L + Sbjct: 487 IIDFFKRKSNVLNCNATVIGASGSGKSVTMKKLVNFNCVAGIKTIIFDPERTEFLPLIKK 546 Query: 526 MGGVYLD---GETLRFNPFANITDIDQSA----ERVRDQLSVMASPNGNLDEVHEGLLLQ 578 G ++ G + NP +++ + + L V+ NL E ++L+ Sbjct: 547 WNGQIINVALGNKTKINPLEIFKNVENDNLNINSIISNHLQVLEEWFSNLFSNLEEIVLE 606 Query: 579 AVRASWL------AKENRARIDDVVDFLKNASDSEQYA--ESPTIRSRLDEMIVLLDQYT 630 A S N+ D D + Y E +SRL + +++ + Sbjct: 607 AFLISIQNCYKNSKFYNKPIKDWTSQDFPTFDDLKPYVLDEVSKAQSRLIRLEYIINNFV 666 Query: 631 ANGTYGQYFNSDEPSLRDDAKMVVLELGGLED---RPSLLVAVMFSLIIYIENRMYRTP- 686 NG Y +N ++ +++ + + A + L+ ++N ++ Sbjct: 667 GNGKYANLWNG-YTNIDLTNDLILFDFADFGSGGQNTRIKAAQLSLLVKIVDNIIWNNDL 725 Query: 687 -RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 ++DE + N + R R+ G++I TQNI DF A Sbjct: 726 TIRQPIQIIVDEAHTFISSDNTYALNMMSTFARRIRKRNGSFILATQNISDFVKPGAIKD 785 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWF 796 AR N+ + I K ++ + LY +F + + + F Sbjct: 786 ARDIINNTQFSFIGKLMPQDLKDLDTLY-SKFNGFTENEMTNIRTQEVGNF 835 >UniRef50_Q2IEL2 Type IV secretory pathway VirB4 components-like n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEL2_ANADE Length = 861 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 157/841 (18%), Positives = 298/841 (35%), Gaps = 96/841 (11%) Query: 73 GANESIVEALDHMLRT---KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNA 129 A E + + LR+ L L + + E +RE+ G A A Sbjct: 45 FAGEDQIAGIGEALRSLVASLDDETTLHFI----HRIEEGAEEDVREY--EGIAAATDAA 98 Query: 130 ITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSK-------------------- 169 R Y A LR RV++ + P Sbjct: 99 ALREYVASRARWLRTQ--------RLRRARVYVFFSGPGGLKQGIGRGLLGGKLLFGKAT 150 Query: 170 ----KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 + + + L + A L A I ++ +D + + E++N Sbjct: 151 QLTGAEHARRLGRLAQLRDRVAARLGAAGIPSRELDLEDVWRLHYELLNPTRARAGAAPP 210 Query: 226 QLDPYSDL-NYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 ++ L + Q V+ E+ + + + R +A L + Sbjct: 211 RVRLRDTLWSDQVVKREGLHLAEYTEAEQLAHEDVEDGRGHLRQGGIWRR--VATLKVLP 268 Query: 285 DNYSNLL--NPELSI-----SCPFILTLTLVVEDQVKTHSEANLKYMDLEK-KSKTSYAK 336 + ++ P L + + L +T+ V Q N ++ +E ++ + Sbjct: 269 EGGTDYFACEPLLGLATARGPLSYTLAVTVHVRTQKTARWLLNNQHALVESLRAVMPFLD 328 Query: 337 WFPSVEKEAKE-----WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 +EA + L + L + + VV+ +++ +E E Sbjct: 329 RRTVESEEADQAKQEAIRGLFEELAAMSTKVVALSVSLLLEAGSLDELEAATEASRSAFA 388 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL 451 EL+ + L+ LP QL++ G R N A+ +P+ A Sbjct: 389 AAGNSELLVEEVTQVPALLSMLPGA----CRYQLRKKGCTSR----NAADFLPVFAPWRG 440 Query: 452 T---PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 + + LL PT + D+F + ++ V +G+GK+ + L +G Sbjct: 441 SARASSVLLTPT--GEAFRFDLFDKSSGVNAHHGIVVADTGSGKSVTLGALTLDARAAGV 498 Query: 509 FAVVFDMGDGYKSLCENMGGVYLDGE-TLRFNPFANITDI--------DQSAERVRDQLS 559 A++ D G +K L E +GGV++ + + +PF + + + ++ E V L Sbjct: 499 EAILIDNGKSWKPLTELLGGVHIPVDLSTSISPFLSYSQLAGEGTEISNEDIEHVVQFLE 558 Query: 560 VMASPNG--NLDEVHEGLLLQAVRASWLAK-ENRARIDDVVDFLKNASDSEQYAESPTIR 616 V + D+V ++ +A+R ++ + R +V + ++ P R Sbjct: 559 VCVADRTRPPFDKVERDVVARAIRWTYETRFRQRPEEPPLVGQFSEGLATHEWTH-PDDR 617 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 + D+++ L + G Y + N LR DA ++ +L + + M ++I Sbjct: 618 AIADDLVRRLAIFCT-GIYADFLNRP-SQLRFDAPLLTFDLAKVSENAGTKSVAMATIIQ 675 Query: 677 YIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 I NR R + L +DEG L + F+ YR R++ A I+QN+ D Sbjct: 676 AITNRAM--ARRTRTLVEVDEGHEYLGADD-ATERFLGGCYRKMRKYDTAMWMISQNLND 732 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG-AAKDQW 795 F + A GNS+ +I L+ A ++ + F R G K W Sbjct: 733 FLGSRVGR--EAIVGNSTIRIFLRH----LAGKHRAVVEHFGLSPRAAAAFAGLELKPGW 786 Query: 796 FSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE-AVWQLAWKKS 854 FS FLL ++ RL + PL+ + ++D D +F+ + S A+ Q + Sbjct: 787 FSDFLLMYGARTAVVRLALHPLAYWILTTDKEDQDFLARAVARNPSYDRLALLQELAARY 846 Query: 855 G 855 Sbjct: 847 P 847 >UniRef50_D2QVN3 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVN3_9SPHI Length = 792 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 139/831 (16%), Positives = 295/831 (35%), Gaps = 87/831 (10%) Query: 62 MGFMLEAIPINGANESIVEALDHMLRTK---LPRGIPLCIHLMSSQLVGDRIEYGLREFS 118 +G+ E + +AL LP G + + + R+ G+RE + Sbjct: 9 IGYRFEGVEAESITSGEYDALGSAFYRATRTLPVGTVIQ-RMDAYYTERHRMPKGVREQT 67 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKK----SRA 174 + ++ + + AA F P T ++ P K A Sbjct: 68 NAPFTQQQHGHLQERSVLHHAAYLFISFGNERQPRTNPANTIWARLGLPMLKDPFEGIDA 127 Query: 175 DILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN 234 + E + S+ + +D++ ++ + N N Sbjct: 128 LVERAERAAEEFTQSISLGRLRLTRLDSEGLENLYFQYFNLE----------------FN 171 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPE 294 Q + ++ A ++ LG ++ + + P + + + N Sbjct: 172 RQPTTLNRSVQPDATFVGLGEKKVNILTMTGQPSVIYNTQPARTGV-----DAPFVSNLA 226 Query: 295 LSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAK--EWGELR 352 L + P +L + ++ED K + ++ E+K + + + E + K E + Sbjct: 227 LDLQVPHLLVTSFLIEDTEKV-----IGSLEFEQKINRN-LDFLMTHENKIKMLELEDYI 280 Query: 353 QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 L + S++S L++ + DN V++ I SFR G + N Sbjct: 281 DGLRTDNKSLISVNLSLVVWNTDNKLREGLVQRGI-ASFRAMGGADVFVETMDTTNLFFA 339 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFF 472 L G ++ L +G N A + + G L +++F Sbjct: 340 LAPGNGYQNYRWLLMSG-------DNAACYLNCATNYRTANQGELLSDRYGNPILVNLFN 392 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 +N N N V G +G+GK+ + + ++G ++ D+G Y SL +GG Y Sbjct: 393 TDLN--NQNSVVVGPTGSGKSFTMGYFMLQRYEAGRRQIIIDVGGTYYSLMTALGGRYYQ 450 Query: 533 GE---TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRAS------ 583 + ++FNPF + + D+++ +++ + + ++ + QA R+ Sbjct: 451 YDPQNPIKFNPFGILVNSAGQYVPDGDKINFLSTLLAIIWKGYKRPVRQAERSVLVRLIP 510 Query: 584 ----WLAKENR----------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVL---L 626 W + + DFL ++ E + + L Sbjct: 511 MYYEWYNTQIEQDPGNPPTPVPSLVGFYDFLYQYLKEKEGTEELVRWHKAFDFAEFFTCL 570 Query: 627 DQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP 686 + + G Y ++ E ++V ++ ++D L V + + + R P Sbjct: 571 EPFVV-GHYRDVLDAGENEDISGYRLVCFDMARIKDNELLKSVVTMLITELSLDVIRRYP 629 Query: 687 RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA 746 +++ K +DE W +L + +G+F+E YRT R++ G+ ITQ + + + S+ Sbjct: 630 KDV-KYLYMDEAWSML---SEGMGDFVEMMYRTIRKNNGSMCIITQGVKEIED---SAVG 682 Query: 747 RAAWGNSSYKIILK-QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 N+ KIIL Q K+ + + + F + D + +K + ++ Sbjct: 683 PVIIANADTKIILNHQDTKQLDRVSAVL--GFTKHELDKMRSIRVSKT--WREIFIRQGE 738 Query: 806 HSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL-SIHEAVWQLAWKKSG 855 + +RL + +S + E ++ +E +I AV Q ++ Sbjct: 739 YGKVYRLEAALNIYPLLTSKPAEREHLRDLTQEYRGNIVYAVRQFNEDRAA 789 >UniRef50_C9LWN3 Putative conjugal transfer protein TrbE part 2 n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWN3_9FIRM Length = 821 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 151/885 (17%), Positives = 293/885 (33%), Gaps = 137/885 (15%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHM--------LRTK 89 P+ LLP+ ++++G+ ML G + LD M + K Sbjct: 22 PRLQYLLPWAYVDEDTGIVHGKDHS--MLAVYEFRGPDMDSSTYLDLMQYNAAVNNVIKK 79 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY--MKAAATQFPLPE 147 LP G L I +E A++ +AYY K T++ Sbjct: 80 LPTGYVLYF------EAQRGISKEYQESRLDVPLAQKMEDERKAYYAGQKHFETRYYFIV 133 Query: 148 GMNLPLTLRH--YRVFISYCSPSKKKSRAD----ILEMENLVKIIRASLQGASITTQTVD 201 + P L+H +FIS K + + N V +I L ++ Sbjct: 134 YLEPPQLLKHKLTDLFISDKQKDGKTDMRLYVGIVEKFINNVNLIGDMLHSWFPDIHPLN 193 Query: 202 AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 A+ + + S ++Q+ + LNY +DY+ GR Sbjct: 194 AEEALTYLH--------STISTKKQVVKVNPLNY-----------ISDYICDCGVLGGRE 234 Query: 262 ---STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 I + P ++ + ++ + + +V E Sbjct: 235 MMLGDRYIKMITILDFPPVSTPGA--------FDRLNNLDIEYRWVSRFICMSKVDAQKE 286 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEA-------------KEWGELRQRLGSGQSSVVSY 365 ++ K+ + + ++ KE + Q LG +S Y Sbjct: 287 LKDYRQRWNQQIKSFWTQVREAILKEKMEDERDETAMYNKDDASAALQELGQDYTSYGYY 346 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + + +D + LE IL S G+ N M ++ +P + + + Sbjct: 347 TMTVMVSDEDQGK-CLEKANRILESINSLGYTAYIETDNSMESWWGSIPGCYRANIRRPI 405 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT----YRNQLAFIDIFFRGMNNTNYN 481 S N +L P+ A Y + + + Sbjct: 406 --------VSSLNFCHLAPVTATWSGDKRNECLKGPVLLYTDTTGYTPFRLSLHVGDVGH 457 Query: 482 MAVCGTSGAGKTGLIQPL-IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD-----GET 535 +CG +G+GK+ L+ L + + +FD ++L +GG + + Sbjct: 458 TLICGRTGSGKSVLLNTLEVHFLKYPNSNVFIFDKAASSRALTLAVGGNFYNIASEGSGE 517 Query: 536 LRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD 595 L F P A++ D ++ L + N + + + +A+ + + + I Sbjct: 518 LSFQPLAHVEDEKETKWAKEWILGYLNLKNITITPAKDNFVWKALLSLREFPKEQRTIST 577 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 + +++ E+ L T G YG+ F++++ + + V Sbjct: 578 FCEMVQD-----------------QEIRQALAALTVKGAYGKLFDNNKD-ISGIGRWQVF 619 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEK 715 E+ L P+++ + + L IE ++ + + L ++DE W F N E I++ Sbjct: 620 EMETLMATPAIVPSTLEYLFHRIETKLQKA--SGPSLIIMDEAWLF--FDNPMFKEKIKE 675 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY-P 774 ++ R+ + I TQN+ D A N KI L + K ++Y Sbjct: 676 YFKDMRKKNTSIILATQNLTDL--SAKPELLSAVLNNCPNKIYLSDKEAKTEKSQEIYRM 733 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQ 834 Q D+I +D ++S E + RL + P+ + FV Sbjct: 734 FGCNEKQMDIIANMEPKRDYYYS-----SEKGNRIFRLALQPI----------ELPFVTA 778 Query: 835 KRKEGLSIHEAVWQLAWKKSGPEMASLEAWL------EEHEKYRS 873 K+ +++ Q A ++S +E WL +E E YR Sbjct: 779 TAKKDQQAMDSILQSAGRES-----FIEEWLKYKDCQDEWEDYRE 818 >UniRef50_B0KAW2 Type IV secretory pathway VirB4 components-like protein n=6 Tax=Thermoanaerobacterales RepID=B0KAW2_THEP3 Length = 594 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 89/461 (19%), Positives = 179/461 (38%), Gaps = 45/461 (9%) Query: 341 VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS 400 E+ K+ EL +++ Q V + + N + + + + +G Sbjct: 103 TEQALKDAEELMRKIDQEQQQVFYVTVILMVLAP-NQQELDRRTRQVEAALAASGMRGRV 161 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL-LAP 459 F PF L ++KEAG + + VA P A +G+ L Sbjct: 162 LIFRQEEGLKAAGPFCT---LPDEVKEAGA-RNMPAETVAASFPFTASGINDGSGIVLGK 217 Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 L +DI+ RG + TN N + GAGK+ + L+ G ++ D Y Sbjct: 218 DRDGGLVLVDIWKRGGDRTNSNWTILAKPGAGKSFTAKMLLLREYMQGSRVIIIDPEREY 277 Query: 520 KSLCENMGGVYLD--GETLRFNPFAN----ITDIDQSAERVRDQLSVMASPNG------- 566 K +C +GGV+++ G + NP + + D+ + L++ Sbjct: 278 KEMCRKLGGVWINCTGGEGKINPLQVRLRPVEEEDEENAVFQSPLALHIQTLRTFFSLYL 337 Query: 567 -NLDEVHEGLLLQAVRASWLAKE-------------NRARIDDVVDFLKNASDSEQYAES 612 +L + + L A+ + + ++ ++ ++ E+ Sbjct: 338 RDLTDTEKAALEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELYEYC-----VKKAEEN 392 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVM 671 P RL ++ A G Y + ++ D+ +V ++ L++ + A Sbjct: 393 PETYGRLSVLLKR----AAEGA-DSYLWAGPTAVEADSDFIVFDVHDLQNAEDQVKRAQY 447 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 F+++ + N + R R + + V+DE W L+D + + F+ + R++ G+ I I+ Sbjct: 448 FNVLSFAWNILER-DRRERTVLVVDEAWMLVDPQTPQAIAFLRDTSKRIRKYNGSLIVIS 506 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 QN++DF + + +A N +YK++L Q K+ L Sbjct: 507 QNVIDFLAPEVQRYGQALLDNPTYKLLLAQGEKDLEAITTL 547 >UniRef50_B7ABM5 Type IV secretory pathway VirB4 component, ATPase TraC n=3 Tax=Thermaceae RepID=B7ABM5_THEAQ Length = 847 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 158/876 (18%), Positives = 299/876 (34%), Gaps = 81/876 (9%) Query: 24 ESAKANEVLGEMSFPQFSRLLPYRDYNQESGLF-MNDTT--MGFMLEAIPINGAN----E 76 SA + G+ + LLPY + + GL +ND +G LE P + E Sbjct: 2 TSASRTSLFGKAREDSLTALLPY--WEIQDGLMVLNDGRVELGVGLEMSPTLFVHTAYME 59 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 V + +LR+ +P G + + S R+++ ++ S A + + Sbjct: 60 GFVGVVKSLLRSGVPEGTRARLIVEVSPAHPSRVQHYAAGWAPSHPTARFLHERRAEAWW 119 Query: 137 KAAATQFPLPEGMNLPLTL--RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS 194 + + + + L + R + I + K++ + + E + + + I Sbjct: 120 SRWQREEIVEKRIYLTVLFGKRRGKRRIPFT---KEEWQEVVAEAKRIQERIVQIASAYR 176 Query: 195 ITTQTVDAQAFIDIVGEMINHNPD----SLYPKRRQLDPYSDLNY-QCVEDSFDLKVRAD 249 I + Q + +N Y + Q P + + + Sbjct: 177 IRAFPLGDQDIFALAYRYLNPALALSEVPEYRQTWQRYPREAIRRIESLRPPT----LRA 232 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 L G +N + ++L L+ F L + + Sbjct: 233 QLLKGEVDNSYRDALYVGGMWAGILSMYTVPDETYAEMGDVL--ALAGGSRFYLVMDFLH 290 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 E + S++ P+V E + V +++ Sbjct: 291 EPHELALRALKARARRYYSASQSGTYVD-PNVRVGQVETEGAITHISQTGDHVFQVGVSL 349 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 + + Q + + + G R + +LT PF G K Sbjct: 350 VLLDRSREALEGRISQAMSHLSKVPGSPFRVLRNGLLTPWLTLAPFSGGVAEEK------ 403 Query: 430 VVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 V E+ N A+ P +P L + L ++D F + M NYN V G S Sbjct: 404 -VYLLET-NAAHFFPTTGAWRGSPRPVALFKNRQGALVYVDPFDKRMR--NYNGIVVGGS 459 Query: 489 GAGKTGLIQPLIRSVL-DSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI 544 G+GKT +Q L+ +L D V+ D G Y++L E GG ++ G NPF Sbjct: 460 GSGKTFALQYLLSELLKDDKVSVVILDRGKNYQALVEAFGGALIEIRPGAGTSVNPFDLE 519 Query: 545 T-DIDQSAERVRDQLSVM-----ASPNGNLDEVHEGLLLQAVRASWLAKENR-------- 590 ++ + E+ D L V+ A + + + +L A+ ++ Sbjct: 520 EGQVEPTPEKKGDLLKVLRAMVPAGDDRTQEAIENAILEAAIEQTYKRATTVDIGPDGTE 579 Query: 591 ------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 A + D+V L + SP+ + + + L +T + G + + Sbjct: 580 EKRYLGATLSDLVKTLLTLDEIGGRGVSPSEKEVARSLALRLQSWTGDSPMGSFVDRPTS 639 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN---LKKLNVIDEGWRL 701 + A++V EL GL+ L V + I R R L V+DE W++ Sbjct: 640 VPLESARVVCYELEGLDAYEGLDVVGTMLMAGLIWKRASEGKRRGEERNLLVVLDEAWKV 699 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK- 760 FKN +E+ YR R G +ITQ++ DF + A N+++ +L+ Sbjct: 700 --FKNPYAASLVEELYRRFRHLGGGIWSITQSLQDFTGESAGR----IVQNTTWVFLLRV 753 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL----QVENHSSWHRLFVDP 816 Q E+ + PD+ + + + + G +S ++ +L+ P Sbjct: 754 QGEDEYVQRVFNLPDRAMAVFKSLGGV-----KGLYSELMVWAVRDDLKEGDVLQLWPTP 808 Query: 817 LSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAW 851 +++S + + + G + AV LA Sbjct: 809 YDYWLFTSAQEEAAKRKALVEAYGGDVLRAVRDLAE 844 >UniRef50_C9RCA0 AAA ATPase n=1 Tax=Ammonifex degensii KC4 RepID=C9RCA0_AMMDK Length = 569 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 100/500 (20%), Positives = 183/500 (36%), Gaps = 50/500 (10%) Query: 309 VEDQVKTHSEANLKYMDLEKK---SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSY 365 V D++ S + + K +E ++ L++ + + + ++ Sbjct: 34 VPDRLVVKSLTDRVVSARSQLIIEVKKGSVVRLSELEAVIRDLEGLQEAIQTNRDRMLHV 93 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + IT + +D E +++ N + E+ F + F LP M L Sbjct: 94 TVVITVWGRDE-EDLDNRSKELENILARKAAEVRPLVFRQLEGFKNTLPVMT-----YSL 147 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAG-LLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 G V+ +P+ A P+G L T F D F N ++A Sbjct: 148 SSPGAVRNLTLGGAMACLPVTASELSHPSGAFLGFTSTGAPVFFDPFVGPPWLPNPHVAA 207 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLC-ENMGGVYLD---GETLRFNP 540 G +G+GK+ ++ LI + +G VVFD Y+ C E GG + G NP Sbjct: 208 FGYTGSGKSVTLKLLIGRLSLAGVRFVVFDPEGEYRRPCRELWGGEVITLEAGVPAGVNP 267 Query: 541 FANITDID-----------QSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLAK 587 + + D VR ++ +A G L LL AVR + + Sbjct: 268 LDLLPEKDPDTGREVVNVADKVADVRALVATIARGFGGRELTPQEVSLLEAAVRELYSER 327 Query: 588 ENRARIDDVVD--------------FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 + + + + LK A ++ ++LD + Sbjct: 328 GVTSDPESLYERGRALPDGSFAVGRVLKRMPRLSDLAAKLERWPETKDLRLILDPFLEGS 387 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 + G + E DA +VV +L ++D + L A MF ++ + +R KK+ Sbjct: 388 SLGMFDC--ETDKELDAPVVVFDLSRIKDEFTKLYA-MFVVLTWCWHRFAL-RHAGKKMV 443 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 V+DE W + + +F+E R R+H + +Q+I +F A RA + Sbjct: 444 VLDEAWMFAKWPD--SAKFLETLARRGRKHRTGLVVASQHIEEFL---AREEGRAVISSC 498 Query: 754 SYKIILKQSAKEFAKYNQLY 773 + +IIL Q+ + + + Sbjct: 499 ATRIILGQNPTVAREVAEAF 518 >UniRef50_A4V6R2 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6R2_PSEFS Length = 960 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 135/731 (18%), Positives = 261/731 (35%), Gaps = 93/731 (12%) Query: 185 IIRASLQGASITTQTVDAQAFIDIVGEMINH--NPDSLYPKRRQLDPYSD--LNYQCVED 240 I +L + + Q +I++ ++N + + PK R P D N VE Sbjct: 245 EIEQALATYGFQPEVLTGQGYINLHYGLMNPVRSFEIEPPKYRADIPILDALENPDIVET 304 Query: 241 SFDLKVRADYLTLGLRENG-----RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPEL 295 +L A + + NG R I + P + + + Sbjct: 305 RDNLAATATFAHVETEPNGWTIHDRGVPYYIRPVSVMGKPIRSAPGMLQVAMA------- 357 Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRL 355 I ++T+ V V S ++ + K ++ + E++ + +R ++ Sbjct: 358 GIESESLITMNWSVPRAVVVTSRLAIRGRMIAAK-ESMRVGDKETRERQRSDLDAVRSKV 416 Query: 356 GSGQSS------VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 S +S +S +N+ F N E + + + G Sbjct: 417 SSENASNREQFFDLSVHINLMGF---NKEIIDDQAMSLERRLWRIG---HKEVLRGDAVV 470 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFI 468 +PF + K LK + + +V+++ P+ + P +L Q F+ Sbjct: 471 RNSMPFNFRQTSMKLLKRS---IPHLTESVSHMAPMFVEYQGVPDPAILMNNRAGQPIFL 527 Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDMGDGYKSLCENMG 527 D++ +N + +CGT+G+GK+ L+ ++ + D GD Y+SLC + Sbjct: 528 DLWGNSVNTA--HSLICGTTGSGKSFTFNNLLMALRVKYRPKVWIIDKGDSYESLCLVLN 585 Query: 528 GVYLDG--------------ETLRFNPFANITD---------IDQSAERVRDQLSVMASP 564 G Y+ + + NPFA D +D+ R + +M + Sbjct: 586 GNYVRLTTERFVEPVSGRTIDPICINPFALKRDENNRNVKPELDEIFFVARMLIMMMEAG 645 Query: 565 NG------NLDEVHEGLLLQAVRASWLA-----KENRARIDDVVDFLKNASDSEQYAESP 613 +G NL +V LL QA+ + + R D + L + EQ E Sbjct: 646 DGSGSTKSNLTKVTSSLLYQALEEFYRDWVETRPMDEPRFRDFIPHLIKTNFHEQKGEV- 704 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 + L Y G + F+ + + VLE + P+L V + Sbjct: 705 --------LAQNLTLYYGTGPFAAIFDG-YLDVDWENDFTVLETQRMSKSPAL-GIVTLA 754 Query: 674 LIIYIENR-MYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 L I+ ++ R+ KK+ +DE W L N + + YR RR+ + I+Q Sbjct: 755 LFRQIDLYCKFKLDRSRKKVVAVDEAWATLSDPN--AAKALSSFYRELRRYGAGCLLISQ 812 Query: 733 NIVDFDS------DKASSAARAAWGNSSYKIILKQSAKEF--AKYNQLYPDQFLPLQRDM 784 + DF + + N+S+ L S ++ AK + D+ + L R + Sbjct: 813 TVKDFVNLIKAETSGGGDSQDGILENTSHYFFLACSESDYRVAKEELAFTDEEIDLWRSL 872 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 + ++ Q +S RLF P++ + SS D+ +++ R E + + Sbjct: 873 ASLPPMYSEVFYRMRTSQSLYYSGVFRLFSAPMTLWIASSHPDDYR-MRELRTEAIVNEQ 931 Query: 845 AVWQLAWKKSG 855 + ++ Sbjct: 932 RIESSVARQQA 942 >UniRef50_A4XMV0 AAA ATPase n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV0_CALS8 Length = 590 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 99/578 (17%), Positives = 213/578 (36%), Gaps = 66/578 (11%) Query: 229 PYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYS 288 ++ Y+ + + ADY+ LG + R+ + P ++ + Sbjct: 3 EFAPDIYELILPDTFHE-EADYIYLGA-----ENYCRVYVLDID-YPSEMYVG----FFD 51 Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE--KEAK 346 +LL+ + +++ +E + + ++ E KS + P + + + Sbjct: 52 SLLDKGE-------IAISVFIEPRDTGQAIRDITRRINEMKSNAMLQRGEPDYKLLAQIE 104 Query: 347 EWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 + LR L G ++ + I + K + E E I G + F Sbjct: 105 WYDALRASLQRGIEKILMAQVFIVVYSK-SLEQLRENCIRITKFAESLGLNMRCLSFEQA 163 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL--APTYRNQ 464 + +++CLP A + LK + + A L P+ + G N Sbjct: 164 KGYISCLPLGA-----RNLKYIEKFRLMTTSATACLFPVGNTDITYEEGFYIGYNAITNS 218 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 F + F R + N +MA+ GT+GAGK+ ++ ++ + G V D Y+ + Sbjct: 219 PVFYNQFDRSLP--NPHMAIFGTTGAGKSTTMKTMLGRMAAYGYNICVLDPEREYEKIIN 276 Query: 525 NMGGVYLD---GETLRFNPFAN---------ITDIDQSAERVRDQLSVMAS--PNGNLDE 570 +GG Y+ GE L NPF D++ +R L++++ LD Sbjct: 277 KLGGKYIRIRPGEKLGINPFDVEIEEEEGKRFIDLNSKVADIRFILNIISEYYVGRRLDG 336 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVV--------------DFLKNASDSEQYAESPTIR 616 V ++ + VR + K + + + K + E Sbjct: 337 VQMAIIERIVRKLYYDKGITSDPESLYTSARTDEKGRLIVGKIKKELPTLSELREELFKE 396 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 S + ++ + G+ + + ++ D K++ +L E L +++ Sbjct: 397 SETQALAKAMEVFVGEGSLSLFDC--QTTIDADDKIIAFDLKEFERDNFLKFFASVNILS 454 Query: 677 YIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 +I N+ + KK+ + DE W ++ E++E R R++ + + +Q ++ Sbjct: 455 WIWNKFSNAKLKGQKKVVIFDEAWMFTRYQ--ASAEYLEFISRKGRKYKISLMIASQTLL 512 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 +F + RA + KI+++Q + A+ + + Sbjct: 513 EFLQN---DTGRAIINMCASKILMRQESDMAAQIAEFF 547 >UniRef50_A8ZR82 Type IV secretory pathway VirB4 component, ATPase TRAC n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=A8ZR82_DEIGD Length = 841 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 137/845 (16%), Positives = 289/845 (34%), Gaps = 94/845 (11%) Query: 62 MGFMLEAIPINGANESIVEALDHMLRT----KLPRGIPLCIHLMSSQLVGDRIEYGLREF 117 +G E ++ E L +R +P+ I + S + +++ RE Sbjct: 34 VGVEFELPSAAEVTDATREQLAEAIRMIMVQGVPQRCRGRIIIESGPVPDEQMLRVQRED 93 Query: 118 SWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKK------- 170 S + + + L +R F + +K+ Sbjct: 94 HMSNDLLAFLASEDARALEDSRVRGE-----------LSSWRYFFTVRLDTKRRKTGTPV 142 Query: 171 -----KSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 + + I + K + L A + + Q ++ N + P Sbjct: 143 PFMESELQHLIRRAVQIRKALLNMLNAAGFPARELLGQEACSLIWRWHNPGLAASKPPMF 202 Query: 226 QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS---TARILNFHLARNPEIAFLWN 282 + + N + D ++++D L + + ++ A ++ L + + + Sbjct: 203 K-SMFRPPNVSLADLKKDFRIQSDTLRAQIAASEIDASRIDAMVVGDRLVQTINMLGPGD 261 Query: 283 M--ADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS 340 LL ++ L + + V+ + + + T + P Sbjct: 262 STYPGMTERLLRRLSGHHVYLVIDLNHLYQHDVRKRLNGAARSATI---AATDASLGTPD 318 Query: 341 VEKEA--KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 V A + +L + V + +++ +D +E E G + Sbjct: 319 VANSAVLDNISSVLYQLTQSEEHVFEFGISLVLIARDKDELEQMKEIARTEMSMLGGAKS 378 Query: 399 ISPRFNHMRNFLTCL-PFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL 457 ++ +L L P A + F + + S NVA+++PLV + + Sbjct: 379 AYGTVQNIPQYLDRLAPMNAQENDF--------LFQCFSVNVAHMVPLVGPWRGSNKPIA 430 Query: 458 AP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 + L ++ NY + G++G+GKT + Q G ++ D Sbjct: 431 VFRSRWGSLTGLNP---ADGTLNYGTLIVGSAGSGKTFMTQGWAARTGALGAEFIIVDQK 487 Query: 517 DGYKSLCENMG----------GVYLDGETLRFNPFAN---ITDIDQSAERVRDQLSVMAS 563 Y+S ++G G ++DGE +R+N F + D++ + Sbjct: 488 RDYESFIASLGEDGQFIPFAPGEFVDGEVVRYNAFELPEGEFEPDENHKMFLLGFITALL 547 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENR----------ARIDDVVDFLKNAS--DSEQYAE 611 +L + + ++ A+ ++A R + V LKN + +E + Sbjct: 548 GEEDLGSIEKAIVTAAIEQVYIAAVTRNGQGQVIYTPVTLSKFVRTLKNLNAVGTESLRD 607 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 ++ + + + L Y + G + + E ++ +AK V ++ + ++ L + Sbjct: 608 FEEAQTTIRRLAMSLQTYIGDTPMGTFLDG-ESTICMNAKYVYFDIAKIREQQDLTRVAL 666 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 +I I +R P + K+ VI+E L FK +F+ Y+ R + + +T Sbjct: 667 LLIIKQIWDRAKAHP-DRVKVAVIEEIGVL--FKIQAALDFVATLYKLGRAYNLWPVGVT 723 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 Q I DF + N+S II K SA+E A + +I G Sbjct: 724 QEIADF------QLGKGLINNTSQFIIGKVSAEEAAMIVDVL--GLNDAAHGLILSLGGE 775 Query: 792 KDQWFSSFLLQVENHSS----WHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAV 846 K + + FL+ V + R F + + M++S + ++ + G + EAV Sbjct: 776 KGR-YREFLVMVNKETGMTGDVVRYFPNKVEYWMFTSAPEEKARRERTVQAYGGNTLEAV 834 Query: 847 WQLAW 851 LA Sbjct: 835 RALAG 839 >UniRef50_C2FTT8 Conjugative transposon protein TraG n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTT8_9SPHI Length = 829 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 134/773 (17%), Positives = 266/773 (34%), Gaps = 71/773 (9%) Query: 120 SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY---RVFISYCSPSKKK----- 171 G ++ + + Y A++F L + R Y R +++ KK Sbjct: 68 EGHIIQKHDVFIKRKYRPKPASEF-LEQKYQEHFEGREYTEIRTYLTVTRQVKKGAFYTY 126 Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 + ++ + + L GA++ + V ++ + + L Sbjct: 127 DKKVLVTFGQNMAKVFDLLSGAALNPSYLTEAEINRFVNRVLCMEFEQPHITLDNLRCGD 186 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNP--EIAFLWNMADNYSN 289 Q + + + ++ L E + TAR + P + FL N+ + Sbjct: 187 R-ELQIGDRAVRCISMVNTDSVDLPEKVGSFTARTETNGMRDFPVDNLFFLHNVPGYRTI 245 Query: 290 LLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA--KE 347 + N L I Q T + +K P ++ Sbjct: 246 IYNQLLEIPS------------QQITLGKLEVKRKRHSS---------VPDPANLMCVED 284 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 L + +V ++ + + + I + + G +N + Sbjct: 285 IDRLLVDVARDNQLLVHAHYSMIVCA--DTDRIDKTANFIEAALFQQGIIPSRNAYNQLE 342 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL--APTYRNQL 465 F LP G L K A F +P P+ L + Sbjct: 343 LFRCALP-GNGVELKKYDWFLTTADAALCFFFKERLPTD-----EPSEFLLRFTDRQGVP 396 Query: 466 AFIDIFF---RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSL 522 ID R N N V G+SG GK+ I + + L V+ D+G Y L Sbjct: 397 VAIDPSDLVMRTGRIKNRNRFVLGSSGTGKSYAINAICQQYLQYNTDVVIVDVGHSYSGL 456 Query: 523 CENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMAS----PNGNLDEVHEGL 575 C GG Y+ + + + NPFA I++ + + E+ ++++ G + V + Sbjct: 457 CSTYGGKYITYSEEKPITMNPFA-ISEEEYNIEKKDFLITLICLLWKGSEGTVTTVERDV 515 Query: 576 LLQAVRASWLAKENRARIDDVVDFLKNASDSE-QYAESPTIRSR------LDEMIVLLDQ 628 + + A + ++A I+D VD L S E + P IR+ ++E +L + Sbjct: 516 ISNVISAYYAHHFDKA-IEDRVDKLDFNSFYEFAVRKIPDIRNEESIAFDVEEFRFVLKK 574 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 + G Y N + + + +V E+ +++ +LL V ++ +M R +N Sbjct: 575 FYRGGEYEAILNEEADQSLFNEQFIVYEIDNIQNNKTLLPIVTLIIMDLFVQKM-RHRKN 633 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 +K +++E WR + + + F+ +T R+ G I +TQ I D + + Sbjct: 634 RRKTLILEEAWRAI--SSPMMANFLLYLNKTVRKFWGEIIEVTQEINDIIGNPI--IKDS 689 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR--DMIGKFGAAKDQWFSSFLLQVENH 806 NS I+L+Q+ +F K +L ++ + F+ F ++ N Sbjct: 690 IINNSDTIILLQQNEADFRKVAELLSINEAEQKKIFTINRLDNKDGRARFNEFYIRRGNT 749 Query: 807 SSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMA 859 + + V ++++ P+ V+ K S A+ +A Sbjct: 750 GEVYGVEVSIYHHLAFTTEKPEKSAVEIYAKHHGSYPAALTAFVSDMEKSGLA 802 >UniRef50_A5KS14 Type IV secretory pathway VirB4 components-like protein n=7 Tax=candidate division TM7 RepID=A5KS14_9BACT Length = 625 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 114/584 (19%), Positives = 217/584 (37%), Gaps = 82/584 (14%) Query: 242 FDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPF 301 L++ Y LG T ++ P + ++ + ++ + IS Sbjct: 43 SSLEIHGGYFRLG--------TKYCRTMYVYAYPRQIYTGWLSSIIN--IDEVIDISMFV 92 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 + V+ + ++ L+ K P VE ++ ELR ++ G Sbjct: 93 YPVESQVILNNLRKKVT-QLEASMNINAEKGKVRD--PQVEAAIQDAEELRNQIQVGSER 149 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF---NHMRNFLTCLPFMAG 418 Y L +T + D E ++ I G +L+ + + + P M+ Sbjct: 150 FFRYGLYVTMYA-DGLEELNFIQHKIETIL---GQQLVFSKVASSQQEQGMNSTFPQMSD 205 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMN 476 + ++ G + + P + + G+L + N L D F Sbjct: 206 QLQIRRNMNTGAISTS--------FPFTSADLTQEKGILYGVNMHNNGLVIFDRF----T 253 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---G 533 N NM V SGAGK+ ++ + G ++ D + Y+ LC+ +GG Y+ Sbjct: 254 LENANMVVFAKSGAGKSFTVKLEALRSMMIGTDVIIVDPENEYQRLCDAVGGSYVRLSLN 313 Query: 534 ETLRFNPFANITDIDQSAER---------VRDQLSVMASPNG-NLDEVHEGLLLQAVRAS 583 R NPF ID + L +M + L E L QA+ + Sbjct: 314 SDTRINPFDLPQVIDSEDADDALRANLVTLHGLLRLMLTNAAVLLTPNEEADLDQALIDT 373 Query: 584 WLAKENR----------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 + I D+ + L + S + L +YT+ G Sbjct: 374 YARAGITSDPLTHQSPPPTIGDLYETLLHMGGSGP------------SLAQRLRKYTS-G 420 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 T+ F S + ++ + MVV + LED L M+ ++ +I N++ + K++ Sbjct: 421 TFAGIF-SQQSNVDINNNMVVFNIRDLED--ELRPVAMYIILSHIWNKVRTEQK--KRML 475 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 ++DE W+L+ + + F+ + AR++ TITQ++ DF S RA NS Sbjct: 476 IVDEAWQLMKYDD--SANFMFSLAKRARKYYLGLTTITQDVEDF---MGSKMGRAIVANS 530 Query: 754 SYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 S +++LKQS+ + ++ + +R + F + +F+ Sbjct: 531 SMQLLLKQSSSAVDVLSDVF--KLTEEERKRLANFPVGQGLFFA 572 >UniRef50_C6I0M0 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0M0_9BACT Length = 832 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 147/813 (18%), Positives = 271/813 (33%), Gaps = 96/813 (11%) Query: 86 LRTKLPRGIPL--CIHLMSSQLVGDRIEYGLREFSWSGEQAERFN-AITRAYYMKAAATQ 142 R + G P L S E G E + ++ E F TR ++ A Sbjct: 74 FRVEFRHGTPSERSFLLPSGPSPFVWNEEGTGEILLAEDKNEDFGSRPTRKRHLSLAIVG 133 Query: 143 FPLPEGMNLPLTLRHY-RVFISYCSPSKKKSRAD----ILEMENLVKIIRASLQGASITT 197 + P+ L L H+ R S ++++ + E+ + + + A L GA + Sbjct: 134 Y--PDHERHRLRLSHFPRGGASPVPKGREETPKRRDERLREIRQIEETVLALLPGAGMEG 191 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE 257 + + + + N LD + + + F + Sbjct: 192 SSPGEEELLAHLAGRANPGL-------LALDGFREDARGPLPPLFQTTFQ----EFPGEL 240 Query: 258 NGRNSTARI---LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 + L + P +A C LTL L D+ Sbjct: 241 KAYRPDGEVLWGRFHALRQLPAAFHRETLAPILEG-----PDFDCD--LTLNLFKPDR-- 291 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPS----VEKEAKEWGELRQRLGSG-QSSVVSYFLNI 369 + + P +E E + + L G + LN+ Sbjct: 292 ---ALASRAIQSNSTLNRFLTLLLPGKSYRLESVIAEQEDCLKTLHEGPEEESAPLLLNL 348 Query: 370 TA-FCKDNNETALEVEQDILNSFRKNGFELISPR-FNHMRNFLTCLPFMAGKGLFKQLKE 427 T + + + Q+ L +F + L + + F + P G Sbjct: 349 TLGYWHSDKRRLSGMGQETLRAFSEADGALCAAEPYRQWPLFRSQFP---ADGCAND--- 402 Query: 428 AGVVQRAESFNVANLMPLVADNP-LTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 + + A +P+ P + A +R + +D + R + N N V G Sbjct: 403 --RWEVVTAAQAARFLPVWDKFPDMERPWFFAKNHRQEPVSLDFWSRELP--NANGLVIG 458 Query: 487 TSGAGKTGLIQPLIRSVL--DSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPF 541 SG+GK+ ++ L+ L AV+ + G ++ LC GG Y+ + NPF Sbjct: 459 RSGSGKSFGVKMLLHQYLLASPDHHAVIVENGGDFERLCAFFGGDYVRVDLSGNFSLNPF 518 Query: 542 ANITDIDQSAE--------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA---KENR 590 D+ + + + + +H G+L Q + + + R Sbjct: 519 PLKEDLAREGGLYDPDWMGFLVALIETFLITAHPVTPLHRGILGQCLGDLYDRLPYAQGR 578 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 + D+V L + + E +R M L+ + + G Y FN+ + R + Sbjct: 579 PSLSDLVRTLFSFRGRDAEDEENAVR-----MAKTLESW-STGLYAPLFNNPQ-GFRPRS 631 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVG 710 +++ +L GL DR L ++F+ I + +N + V DE RL+ + Sbjct: 632 RLLAFDLSGL-DRQEALRGIVFAFIAGLSMEKLFREKNRRLYFVYDEAHRLMTQFSGT-- 688 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS--AKEFAK 768 F+E YRTAR+ G + ++Q+ D+ + GNSS+K I S + + + Sbjct: 689 GFLEHMYRTARKFGGGVVAMSQSPEDWLGESREG---GILGNSSWKWIFPCSVLPETYRR 745 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 + +I + FS L + RL PL M + + Sbjct: 746 IG------LSERETRIIDSLDFVRGD-FSECYLSMGTRRGILRLEPSPLEYWMAARSPEE 798 Query: 829 FEFVQQKRKEGLSIHEAVWQLA----WKKSGPE 857 + +E S+ EA+ LA K+ G E Sbjct: 799 DRLFARALEEEGSVREALLALARESRQKREGEE 831 >UniRef50_B9MP37 AAA ATPase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP37_ANATD Length = 621 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 99/603 (16%), Positives = 208/603 (34%), Gaps = 65/603 (10%) Query: 208 IVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLK--VRADYLTLGLRENGRNSTAR 265 ++ M + K+ + S+ N +E++ L + D + G Sbjct: 1 MMKFMKKFTVKPVSSKQSNISEKSENNR-LIENATGLLDLILPDCIEEGKDYIYLGPERY 59 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE--DQVKTHSEANLKY 323 + +A P +L + N +++++ +E D + + Sbjct: 60 ARVYVVAVYPSDIYL----TFFQTFFNIGQ-------ISMSVYIEPADTGDVIRKLSRMI 108 Query: 324 MDLEKKS--KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 DL + + + ++ +A+++ LR L G ++ + T + D+ E Sbjct: 109 TDLRANIILEGNKPVDYQKLQ-QAEDFELLRASLQRGIEKILYVQIFFTIYA-DSLEKLK 166 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 E + N + + F +R +L LP K + + + A Sbjct: 167 EKCIEFKNRCEAYNLKPRALTFRQLRGYLATLPLGLQ-------KHTENYKTMTTGSSAC 219 Query: 442 LMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 +P G+ F + F + ++AV GT G+GK+ ++ + Sbjct: 220 CVPTGNTEVYYKNGIFLGYNLTTGAPVFYNQFD--DSLLGPHVAVFGTIGSGKSTTMKTM 277 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQ------- 549 + G +A V D YK L +GG Y++ G NPF + D+ Sbjct: 278 LARSAAFGFWACVLDPEGEYKKLINMLGGKYVEVKAGGKAGINPFDLEIEEDEGKRFINI 337 Query: 550 --SAERVRDQLSVMAS--PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 +R L +++ LD + Q+VR + + + +K Sbjct: 338 EGKISEIRFLLGIISESFMGKRLDGTQLSKIEQSVRKLYADFGITKDPESLYSNMKVDET 397 Query: 606 SEQYAES--------PTIRSRLDE------MIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 + Y +R L + +L+ +T GT G + + +++ + Sbjct: 398 GKIYVGKVKKVLPTLSDLRRELSNFEETKQLADVLEIFTGEGTLGLFDCQTDIEIQEHDR 457 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVG 710 +V L + P L ++ +I N+ R K+ V DEGW +++ Sbjct: 458 IVGFNLKEFDKDPFLKFFASVVIMNWIWNKFSHEKMRKYNKIVVFDEGWMFTKYQS--TN 515 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN 770 +++E R R++ + + +Q I++F + R K +LKQ + Sbjct: 516 DYLESISRRGRKYHISLMIASQTILEFL---RTETGRTMLNMCHSKFLLKQEPDLAKETA 572 Query: 771 QLY 773 + Sbjct: 573 TYF 575 >UniRef50_A6EBE8 Conserved protein found in conjugate transposon n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBE8_9SPHI Length = 514 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 87/497 (17%), Positives = 178/497 (35%), Gaps = 32/497 (6%) Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 Q I + + +P A + V + Sbjct: 30 ERQKIRQLLAGMDAVARQETDGAAQIWWAGIPGNAADFPVNDTFDTFV------EQASCF 83 Query: 443 MPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTGLIQP 498 + + ++ G+ + ++D+F + M TN N+ +CG SGAGK+ Sbjct: 84 LNMESNAKSDGTGIRFGDRSFGRPVYVDLFDQPMKTGVVTNRNLFICGGSGAGKSMACNH 143 Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPF----ANITDIDQSA 551 ++R++ D G V D+G YK LC+ +GG Y + ++FNPF ++ DI++ Sbjct: 144 MLRTLYDEGTHCVTIDIGGSYKGLCDLVGGYYFSYTEENPIKFNPFFIGTDDVLDIEKKE 203 Query: 552 ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARI----DDVVDFLK-NASDS 606 L++ + + A+ + + + + DFL Sbjct: 204 SLKTLLLALWKRDGEHFSRSEYVAISGAITLYYEYLAENSSVFPGFNSFYDFLMLEYMQV 263 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 + + L ++ +L+ Y G + N+ E + + +V EL + L Sbjct: 264 MENGKVKEKDFDLGNLLYVLNPYYKGGEFDYLLNATENLDLLNERFIVFELDNIRSHEVL 323 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 V ++ ++M R + +K+ IDE W + + FI+ ++T R+ G Sbjct: 324 FPVVTIIIMEMFISKM-RKLKGQRKILAIDEAWVAI--AKTGMSHFIKYLFKTVRKFNGI 380 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDMI 785 ITQ + D S S KI+L K K+++L + ++ Sbjct: 381 AALITQEVDDLISSPI--IKETVINLSDTKILLDMR-KFMNKFDKLQETLGLSDKAKALL 437 Query: 786 GKFGAA--KDQWFSSFLLQVENHS-SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI 842 A K + + + S +R + Y+++ + V + ++ S+ Sbjct: 438 LSVNKANEKGKNYREVFIDQGGQKLSVYRNELSVSEYLAYTTEESEKLRVMEYAEKYGSM 497 Query: 843 HEAVWQLAWKKSGPEMA 859 + + LA + + Sbjct: 498 EKGITILAEELRQKKAQ 514 >UniRef50_A6L0N6 Conserved protein found in conjugate transposon n=119 Tax=cellular organisms RepID=A6L0N6_BACV8 Length = 844 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 103/596 (17%), Positives = 221/596 (37%), Gaps = 55/596 (9%) Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA--KEWGEL-RQ 353 +SC I + + +++ K + + +K+ + A +EW E+ Sbjct: 263 LSCNHIYSQYVFIDN--------AQKILQMMEKNSRNMLSLSQYSRSNAVNQEWTEMYLD 314 Query: 354 RLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCL 413 + V N+ A+ +D E + D + + + + Sbjct: 315 EAHTKGVLPVRCHCNVIAWAED-AEEFRRIRNDTGSQLAMMECTPRYNTVDTPVLYWAGI 373 Query: 414 PFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA--GLLAPTYRNQ-LAFIDI 470 P AG ++ + L + +P+ G+ +N +DI Sbjct: 374 PGNAGDFPAEESFYTFL------EQAVCLFAGETNYRSSPSPFGIRMADRQNGIPVHVDI 427 Query: 471 FFRGMNN---TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENM- 526 M TN N + G SG+GK+ L+R+ + G ++ D G+ Y+ LC + Sbjct: 428 SDLPMKRGIITNRNKFILGPSGSGKSFFTNHLVRNYYEQGAHILLVDTGNSYQGLCRMIH 487 Query: 527 ------GGVYL---DGETLRFNPF-ANITDID-QSAERVRDQLSVM-----ASPNGNLDE 570 G+Y+ + + FNPF + D + E ++ + + +P + + Sbjct: 488 ERTRGGDGIYITYEEDNPISFNPFYTDSGQFDVEKRESIKTLILTLWKREDEAPKRSEEV 547 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR---LDEMIVLLD 627 G + +R +E R + +F+ D + +R + +D + +L+ Sbjct: 548 ALSGAVNAYIRKITENREARPDFNGFYEFVD--GDYRRMIAEKKVREKDFDIDGFLNVLE 605 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 + G Y NSD + + +V EL + LL V ++ +M R + Sbjct: 606 PFYKGGDYDFLLNSDRELDLTNRRFIVFELDNISGNKVLLPVVTLIIMETFIAKMRRL-K 664 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 ++K+ +I+E W+ L N + +I+ ++T R++ G + +TQ + D S Sbjct: 665 GIRKVILIEECWKALMSAN--MSGYIQYLFKTVRKYFGEAVVVTQEVDDIISSPI--VKE 720 Query: 748 AAWGNSSYKIILKQSA--KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 A NS KI+L Q +F +L + + +++ + + Sbjct: 721 AIINNSDCKILLDQRKYMNKFEHIQRLLGLTEKEKSQILSINQANHPGRFYREVWIGLGG 780 Query: 806 HSS-WHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGPEMA 859 S + V ++++ + VQ+ +E ++ A+ ++A +K + Sbjct: 781 TRSAVYATEVSAEEYFTFTTEESEKLEVQRLAEELDGNLELAIRRMAERKREEQRQ 836 >UniRef50_A0M144 TraG-like protein n=3 Tax=Flavobacteriaceae RepID=A0M144_GRAFK Length = 804 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 115/751 (15%), Positives = 259/751 (34%), Gaps = 53/751 (7%) Query: 127 FNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKII 186 + R +++ A +F + + N+ K I Sbjct: 79 CEKLPRESFLEKATHD----HFKGRGFMQHRSFLFFILPKNKALNNSKYVNPFRNISKGI 134 Query: 187 RASLQGA--SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDL 244 L S D+ +FI+ ++ + L K + N D+ Sbjct: 135 VRELDENVHSFIGAVSDSVSFINNSRKI---DLFPLERKGIERLTNCYFNGFNKGFDTDI 191 Query: 245 KVRADYLTLGLRENGR----NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 + + +G + + ++ E + + + L+++ Sbjct: 192 LLEKGNINIGENYFDTLAINSELCFGESVQSSKTNEKFTSDDFVFHQGFIDGLGLTLNEN 251 Query: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 ++ + ++D+ K + K +L+K S + + + + ++ + + Sbjct: 252 HMVNQIIYLDDKHKWRKLLDKKVEELKKSSN-----FGSQNKIVLGKIQHILDQINADDN 306 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 S + + + + I F++ P +N++ + Sbjct: 307 SRIIRGHLNIIYWDREAKNLNRIASKIKTEFKELDILPYYPGGEERKNYI-----LNSYY 361 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQ-LAFIDIFFRGMNN-T 478 F + + + L + G++ + D++ Sbjct: 362 CFSSNFSNEDLYVTDLKHALCLFINNTNYKSDSTGIIFNDREHNIPVLKDVWDEKKKRIK 421 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL-----DG 533 N A+ +G GK+ L ++R +SG V+ D+G Y + G Y G Sbjct: 422 ARNFAIFAPTGEGKSFLANNILRQYFESGVRLVIIDLGGSYTKFAKLYPGQYTVLRYESG 481 Query: 534 ETLRFNPFANITDIDQSAERVRDQ---LSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 ++L NPF D S ER+ D L + + + + + + + +R +L + Sbjct: 482 KSLGINPFYINNINDLSPERLEDLSVFLFELFASDLKVTKAQSVSIKKILRHYYLNTPHN 541 Query: 591 ARIDDVVDFLK-NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN--SDEPSLR 647 +D F++ N + + + + ++ +Y +G Y F D+ Sbjct: 542 HSMDSFYQFIESNQKELLSKLKIHPDYFNITNFLHIMSEYVGDGLYSFLFEMSEDQTYKI 601 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH 707 +D +++V EL ++D +L VM LI R R+ K + + DE + L F+N Sbjct: 602 EDKRLIVFELDEVKDNKEILS-VMLKLIKSAIQRTIWKNRSEKGIILFDEFAKQLKFEN- 659 Query: 708 KVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA 767 V E +E Y+ R+ GA I Q+I ++ S+ + N+ L + K + Sbjct: 660 -VLESVEFYYQAIRKQNGAIGIILQSINQLPNNSTSA---SILENTQVIYSL-HNEKGYE 714 Query: 768 KYNQLYPDQFLPLQRDMIGKFGAAKDQ-----WFSSFLLQVENHSSWHRLFVDPLSRAMY 822 + + L L + + + + K+ ++ +++ S+ RL V A Y Sbjct: 715 ELVR-----RLSLSKHDLNQLKSIKNNLTGSRKYTEIFIKIGKQSNVFRLEVPMEVYAAY 769 Query: 823 SSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 +DG + + + + S+ +A+ + K Sbjct: 770 QTDGSENDHIMALYDQHKSMEKAITEFINPK 800 >UniRef50_C3KSP5 AAA ATPase n=2 Tax=Clostridium botulinum RepID=C3KSP5_CLOB6 Length = 620 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 100/565 (17%), Positives = 209/565 (36%), Gaps = 64/565 (11%) Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFIL 303 + DY+ LG I +F ++ P ++ + + N+ +LS+ C + Sbjct: 41 IMEEKDYMYLGHEH-------YIRSFAISVYPRKIYVGFLDALF-NIGEIDLSVYCDAVP 92 Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 +VV+ K +A +Y + P +E+ ++ E R + + + + Sbjct: 93 N-DIVVKQLTKKSVQAMSEYNVYMNRGD---IYNTPVLEEMIRDLEEERANVQTNKDKLF 148 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 ++I K + E E I + F + + + + +P Sbjct: 149 FVTISIVLHAK-SLEELQEKTLQIEDMFAGKAMQTRTLTNRQIEGLIKSIPVCQPNIKEY 207 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR---NQLAFIDIFFRGMNNTNY 480 + + S+ V+ L P+ + P G FI+ F N Sbjct: 208 E-------RNMTSYGVSALFPISNPDLTHPNG-AYVGRNLFSGSPVFINQFIGPPLLNNP 259 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS-LCENMGGVYLD---GETL 536 N+ V G G+GK+ I+ I G V D Y+ + + M GVY+ GE Sbjct: 260 NIGVFGIPGSGKSVFIKSFINKHSSLGTKVAVLDPEGEYRKSIVDLMDGVYITITAGEIS 319 Query: 537 RFNPFANITDIDQSAE-----------RVRDQL-SVMASPNG-NLDEVHEGLLLQAVRAS 583 N F D ++ ++D L S+M S +G L+ + + AV + Sbjct: 320 GINLFDISPDFNEKTGVEFVPIMDKVSDIKDLLSSIMRSTSGRPLNGLELVAVETAVIET 379 Query: 584 WLAKENRARIDDVV---------------DFLKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 + I+ + K + ++ + + E+ +L Sbjct: 380 YANFGINKDINSLYQRGGTKLPDGSYAVGRVKKKMPTLSHFHKNLSKKPNAKELSNILIP 439 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 Y + G + E +L DD K++ +L + D + + F L+ ++ + ++ Sbjct: 440 YLRGNSMGMFDC--ESTLPDDVKIIGFDLSHITDEFTKFYS-TFVLLSWLWQKFVMQNKS 496 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 +KK+ +DE W + + + F+E R R+H + + +Q I +F ++++ A Sbjct: 497 VKKIIAVDETWMFVKY--PESAHFLEVLARRGRKHKCSLLFASQYIDEFLNNES---GLA 551 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLY 773 + + ++L+Q+ + + Q Y Sbjct: 552 VIKSCATSVLLRQNPQPAEQIVQYY 576 >UniRef50_A4J314 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J314_DESRM Length = 616 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 98/606 (16%), Positives = 220/606 (36%), Gaps = 81/606 (13%) Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 +I + + + N L ++Q P SDL Q + D++ + Sbjct: 3 YISFLKSLFSKNKQQL---KKQAQPVSDL-AQIFSPDR-IDEYEDHIRVD--------DM 49 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 + PE + +I+ +T+++ + K + + Sbjct: 50 FSRVLVVEALPEFICF--------GWFDEITTIAG---VTVSVALHPYNKKEANDRITRE 98 Query: 325 DLEKKSKTSYA------KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 + + A ++E + + L G++++V+ + IT + E Sbjct: 99 QVNIGADLRLAIKHGDTTRTGALETKYAFYYNFLTDLQLGRNNLVAATITITVTSHNYQE 158 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + E I + ++++ + F +PF+ + + A N Sbjct: 159 LLYKCEL-IKDRLGAT--KVVTMYQRQLDGFTHNMPFIGSLNEYHDVDIA---------N 206 Query: 439 VANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 A L PL++ + P+G+ F+D+F +M +CG + +GK+ ++ Sbjct: 207 AACLSPLISSDFTHPSGIYFGVNQSGSPVFLDLFIGAPRLFGPHMFLCGGTRSGKSYTVK 266 Query: 498 PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQS---- 550 + + +G + V+ D Y+ + E +GGV + + FN F + D+ Sbjct: 267 GITARSIANGMYTVIIDPEGEYQKIVEALGGVIVRFKPNMECMFNIFDIEPEEDEDTGNK 326 Query: 551 -------AERVRDQLSVM--ASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 AE + ++ + + N L L +AVRA +L++ + + Sbjct: 327 YLDIAGKAEEICHLITSLVESQANEKLSAEERALASRAVRAEYLSRNITEDPESIYQSGG 386 Query: 602 NASDS------EQYAESPTIRSRLDE--------MIVLLDQYTANGTYGQYFNSDEPSLR 647 + + Y E PTI S + + +L +T G G YF+ Sbjct: 387 KTTGDGTVFIGKTYKEMPTISSFITRLEEMGAPKLATMLYPFTKEGGMG-YFDGQGIGKF 445 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH 707 D ++VV ++ GL+ + A MF + + + + ++ +K ++DE W ++ + Sbjct: 446 YDNQLVVFDVSGLKTEFQRMYA-MFVMTSWAWEKFVKKDKSKRKRLLVDEAWLMMRHTD- 503 Query: 708 KVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA 767 +F+ R ++ + + +Q+ +F S + + K LK + Sbjct: 504 -TAKFLSDLARRGAKYNTSLMLASQSFREF----TSEEGKVILAQCNTKFFLKMHPNDAK 558 Query: 768 KYNQLY 773 +++ Sbjct: 559 SLTEIF 564 >UniRef50_C5J6G0 TRSE-like protein n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6G0_MYCCR Length = 879 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 106/635 (16%), Positives = 228/635 (35%), Gaps = 65/635 (10%) Query: 175 DILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN 234 + ++E + ++++ +I +Q + + +++ + +N + +PK + Sbjct: 223 EFKDLEFEIARLKSAFSQININSQKLKIEELLNLSIQTLN--SNDKFPKE--------IL 272 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF-HLARNP-EIAFLWNMADNYSNLLN 292 Q + ++ + + S + +F ++ P E+ W SN Sbjct: 273 QQIKNEKKNIAKYFALDEISWKSKYFTSHNKFFSFQSISELPLELPPYWANNFFNSNSN- 331 Query: 293 PELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF--PSVEKEAKEWGE 350 + + D+ + + N + L+ S+ E E + Sbjct: 332 ----------VIWNIQKIDEKEKNKILNKAHTILDINSEDKTQNIIDKKKGEFEQEAIEN 381 Query: 351 LRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFL 410 + +GQ+ S FL + ++ E + +E + + G ++ + RF + ++ Sbjct: 382 VIDIAATGQNLFYSTFLFVN--SANSKEDLINLENQNSHLVKSIGAKIHTLRFKQLEAYI 439 Query: 411 TCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFI 468 F+Q + N+A P + T + F Sbjct: 440 NSF--------FRQKDTLKEWIEMPANNIAYGFPFTTREFNDGNYNVLGTNFHDGTPLFF 491 Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG 528 D F + + N N+ + GTSG+GKT + + LI L G ++ D + Y L + Sbjct: 492 DQFLQQDSRKNSNLFILGTSGSGKTTITKKLISYNLSIGNHVIILDPQNEYAKLGKLFNA 551 Query: 529 --VYLDGET-LRFNPFANITDIDQSAERVRDQ-LSVMASPNGNLDEVHEGL--------- 575 ++L+G FNP + + +V++ L +++ L+ + + Sbjct: 552 NIIHLNGSGQTVFNPLQIRKIFNPNDSKVKNTNLELLSLNISKLETFFKIIFPELNQISF 611 Query: 576 --LLQAVRASWLAKENRARIDDVVDF----LKNASDSEQYAESPTIRSRLDE-----MIV 624 L QAV + DD+ ++ D Q + + + Sbjct: 612 MALKQAVEKLYEKFGFYELSDDITEYENTFYPTIDDLIQVVKEAEFDFLTKQEKNILLAS 671 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIYIENRM- 682 L ++ N G+ FN+ + + + L + + F + +I+ + Sbjct: 672 LKSEFNKNSILGKMFNNHSTNYNATQNFAIFNVAALMQLDKKIYQSAFFLTLSFIQGEIS 731 Query: 683 -YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD-SD 740 + N K + V+DEG + +D N F+ +T R++ G I TQN DF + Sbjct: 732 DFYMQDNKKIILVVDEGHKFIDESNLFALNFLFDTAKTIRKYNGGLIITTQNPGDFAITG 791 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 +A+ + A N Y I +K+ K + LY + Sbjct: 792 EAARKSEAIIENCQYSIFFNLKSKDIEKIDNLYKN 826 >UniRef50_B0K833 Type IV secretory pathway VirB4 components-like protein n=6 Tax=Thermoanaerobacter RepID=B0K833_THEP3 Length = 611 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 93/519 (17%), Positives = 187/519 (36%), Gaps = 56/519 (10%) Query: 341 VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS 400 + K ++ LR+ + + + Y + + D+ E + + Sbjct: 118 LRKAVEDLERLRESIQMNRDKL-YYVTAVVSVSADSVEELERSSKILEEVLAGKSIRARR 176 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT 460 F + +P + + L S A+L P + G+ Sbjct: 177 MFLRQSEAFKSFVPILENH--CEDLSR-----NFNSGAAASLFPFASPEFSHKKGIPLGI 229 Query: 461 --YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDG 518 + D F TNYN+ + TSGAGK+ LI+ L G V D Sbjct: 230 NLFTGSPVIFDNFIGPPFMTNYNLGIFATSGAGKSFLIKLLSMRGALLGIKTVFVDPDGE 289 Query: 519 YKSLCENMGGVYLDGETLR---FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL 575 Y + + MGG + T NPF + D++ R D + +A + + EG+ Sbjct: 290 YNRMVQKMGGSVVKISTETENIINPFDVEEEEDENEIRYVDIVQKIAEIKALVGMIVEGV 349 Query: 576 LLQAV------------RASWLAKENRARIDDVVDFLKNASDSEQ--------------Y 609 + + R + A+ + + + KN +DSE+ + Sbjct: 350 MKDKISAEELAAVEEAVRDEYEARGINKSPESLYE--KNIADSEEFYFKKKKEMPTLSSF 407 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 E R + + ++ + GT G F+ +D+ +V ++ + DR L Sbjct: 408 VERLKKNPRGERIAAVMKPFLKGGTLG-IFDGQTNVSLEDSYLVNFDVSEIRDRF-LRTY 465 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 M+ + +I + + KK V+DE W + +K+ F+E R AR+ + Sbjct: 466 AMYVITNWIWEKFVKKDVKQKKRVVVDEAWMFMKYKD--TAYFLENLSRRARKRNTSLTV 523 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 +Q+ ++F + S +A NS+ ++KQ+A + +++ +RD + G Sbjct: 524 ASQSFIEFSN---SQEGKAVLTNSAAVFLMKQAATDIDSVQEVF--HLSQGERDFLTSCG 578 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 L V + + ++ + + S++ + Sbjct: 579 VG------EALFLVGRNKTAIKVVASDYEKKLISTNPNE 611 >UniRef50_A5FFJ6 Bacteroides conjugative transposon TraG-like protein n=36 Tax=Bacteria RepID=A5FFJ6_FLAJ1 Length = 837 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 99/591 (16%), Positives = 208/591 (35%), Gaps = 50/591 (8%) Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLG 356 + C I + D + + + K S A++ + + + + Sbjct: 262 LGCNHIYN-QYLFLDSSEENLQKFEKSARNMH----SLARYSRANQINREWIEKYLNEAH 316 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 S S + NI A+ D+ +++ D ++ + + + +P Sbjct: 317 SLGLSSIRAHFNIMAWS-DDPAELKQLKNDCGSALALMECKPRHNTADAATLYWAGMPGN 375 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA--GLLAPTY-RNQLAFIDIFFR 473 AG ++ + L + +P+ G+ + +DI Sbjct: 376 AGDFPCEESFYTFI------EPALCLFTQETNYRSSPSPFGIKMADRLTGRPIHLDISDL 429 Query: 474 GMNN---TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG--- 527 M TN N + G SG+GK+ ++R + G ++ D G+ Y+ LC + Sbjct: 430 PMKRGIITNRNKFILGPSGSGKSFFTNHMVRQYYEQGAHVLLVDTGNSYQGLCGLINSRT 489 Query: 528 ----GVYL---DGETLRFNPF---ANITDIDQSAERVRDQLSVMAS-PNGNLDEVHEGLL 576 GVY + + FNPF + DI++ E ++ + + + E L Sbjct: 490 RGEDGVYFTYTEDNPIAFNPFYTDDKVFDIEKR-ESIKTLIMTLWKRDDEPPTRSEEVAL 548 Query: 577 LQAVR---ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR---LDEMIVLLDQYT 630 AV + +++K D + + +R + + + +L+ Y Sbjct: 549 SNAVNGYIELIRDNGLAPSFNGFYEYVK--GDYHEILKEKQVREKDFDIANFLNVLEPYY 606 Query: 631 ANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLK 690 G Y NSD + +V E+ ++D L V ++ N+M R + ++ Sbjct: 607 RGGEYDYLLNSDRQLDLLAKRFIVFEIDAIKDHKILFPIVTIIIMEVFINKMRRL-KGVR 665 Query: 691 KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAW 750 KL +I+E W+ + + E+I+ ++T R+ G I +TQ + D + Sbjct: 666 KLILIEEAWKAI--AKEGMAEYIKYLFKTVRKFFGEAIVVTQEVDDIIKSPI--VKESII 721 Query: 751 GNSSYKIILKQSA--KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS 808 NS KI+L Q +F + + + + + + + + S Sbjct: 722 NNSDCKILLDQRKYMNKFDDIQAMLGLTDKEKAQVLSINMNNSPSRLYKEVWIGLGGTQS 781 Query: 809 -WHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGPE 857 + V Y+++ + V Q E ++ A+ +A + E Sbjct: 782 AVYATEVSLEEYLAYTTEETEKMEVMQAAAELDGNVELAIRHIAKLRWERE 832 >UniRef50_Q2NC54 Type IV secretion system protein B4, putative n=7 Tax=Alphaproteobacteria RepID=Q2NC54_ERYLH Length = 812 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 141/853 (16%), Positives = 261/853 (30%), Gaps = 108/853 (12%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESI------VEALDHMLRTKLPRGIP 95 LPY + L + D ++ ++ + E + +LR+ L Sbjct: 19 DRLPYARLVDANTLQLRDGSLMMAIQVPGLLFETEDSDALNAHAATREVVLRSTL----D 74 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 L ++ R+ L E + + A + + + + L Sbjct: 75 SRFVLY-HHVIRRRVAVELDA-----EFPDPLSRHIDARWKERLGSGSLFINDQFVTLVR 128 Query: 156 RHYRV----------FISYCSPSKKKSRADILEMENLVKIIRASLQGASI-------TTQ 198 R R + S + ++ ++ + ASLQ Sbjct: 129 RPARGKAGLADRASRWFSRRKEELEADPRELRSLQAAATGLIASLQAYGASLLGEYQGPS 188 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN 258 ++++ + N + +D L Y+ D + + Sbjct: 189 GGTNSEILELLSALYNGEMKPVRRPAEDVDIGQMLPYRRASFGLD----------AMEQR 238 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 G L PE LL+ L + I+T T +++ Sbjct: 239 GAGDPDFSAILSLKDYPEATSP--------GLLDSLLRLPYEMIVTETYAPQERTTARER 290 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 +L L + + A E + R LG+G + L++ + Sbjct: 291 IDLSLRRLRSVDEEATA--------ERADMQNARDALGNGAVGFGDHHLSV-LVRETTLP 341 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + + G ++ N F LP + + + + SF Sbjct: 342 RLDDASAACAAALADTGAVVVREDTNLEPAFWAQLPGNEAYIVRRAMISS---ANMASFG 398 Query: 439 VANLMPLV--ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 + L A N A L T F + + N +V G SG+GKT ++ Sbjct: 399 SLHGFALGQAAGNHWGDAVTLLETTSATPFFFNFHNGDLG----NFSVIGPSGSGKTVVM 454 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAER 553 L ++FD G + +GG Y GE FNP A + D + Sbjct: 455 NFLAAQAQKFAPRTILFDKDRGAELFVRGIGGRYDRIYAGEPTGFNPLA-LPDSAANRAF 513 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 +RD L V+ G + AV A++ EN A + + +F + S S Sbjct: 514 LRDWLGVLLKAEG---PEELQTIAHAVDAAY---ENDASLRQLRNFRELLSGSR------ 561 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 R ++ L + +G + F++ L D + + ++ L + P L M Sbjct: 562 --RPEPGDLPDRLSAWIHSGEHAWLFDNQRDELDLDNRTLGFDMTALLENPKLRTPTMMY 619 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 L IE R+ + +IDEGW+ LD + I +T R+ TQ+ Sbjct: 620 LFHRIEERL----DGNPAMILIDEGWKALD--DEVFAARIRDWLKTLRKRNALVGFATQS 673 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 D + S+ A ++ + + S Y + + +I Sbjct: 674 AADALESRIST---ALVEQTATMVFMPNSRARAEDYCDGF--GLTSHELALIRSLP---- 724 Query: 794 QWFSSFLLQVENHSSWHRLFV--DPLSRAMYSSDGPDFEFVQQKRKE-GLSIHE---AVW 847 FL++ + S RL + P + S + R+ G + + A+ Sbjct: 725 AHSRCFLVRQPDASVVVRLDLSNAPEVLTVLSGRESSVRRLDLLREAVGDNPADWFPALT 784 Query: 848 QLAWKKSGPEMAS 860 AW E Sbjct: 785 GHAWPGDPSEETE 797 >UniRef50_Q120F2 Type IV secretory pathway VirB4 components-like n=1 Tax=Polaromonas sp. JS666 RepID=Q120F2_POLSJ Length = 846 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 160/862 (18%), Positives = 288/862 (33%), Gaps = 110/862 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPING----ANESIVEALDHMLRTKLPR 92 F+ LLP+ + D ++ G+ E + G ++ + L LRT R Sbjct: 17 SFAELLPWFAQVAPGLVICQDGSLLAGYTFEGSDVEGRQDFESDQKINQLQTALRTLTDR 76 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM-KAAATQFPLPEGMNL 151 + + ++ EQ E+ + R + + F P Sbjct: 77 ITMWTVQERRFVSGYPKGDFSSPIARAIDEQWEKSISKQRNARLTQRIYLGFNFPNSSEA 136 Query: 152 PL-TLR------HYRVFISYCSPSKK---------KSRADILEMENLVKIIRASLQGA-- 193 LR +V + K+ K R + +M + + + G Sbjct: 137 FFEALRAELEENDGKVLAALGGLIKRRLSDKGAIAKVRGQLADMTTEFEKLLGAFSGIVE 196 Query: 194 -SITTQTVDAQAFIDIVGEMIN--HNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 ++ + ++ + F+ + N P + + + L L R D Sbjct: 197 TNLGFKRLEGEEFLGDLYSRANLASPPGPVRLPKGGAYLNTALASD------TLIRRQDQ 250 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 G +A + P+ A+ S ++ +++ C ++L Sbjct: 251 FEF----KGPTKSAYVAALSTTGTPQEAY--------SGYMDSLMAVDCEYVLVQCYRFI 298 Query: 311 DQV---KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELR------QRLGSGQSS 361 D+ K +A + Y K T + E E G L+ L +S Sbjct: 299 DRTVAEKAIQDAEMFYRSEVKSVLTRVFERMTDSESEKVNTGNLQLAQDAQDALVELTAS 358 Query: 362 VVSY-FLNITAFCKDNNETALEVEQDILNS-FRKNGFELISPRFNHMRNFLTCLPFMAGK 419 VSY + N+T + E D++ S R NGF ++ R M FL +P A Sbjct: 359 DVSYGYYNMTILALGTTQKEAENAADLMASNLRANGFTILRERQGLMSAFLATMPGNADA 418 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLA-----FIDIFFRG 474 L +L A + N+A+L P+ + P L F+ + Sbjct: 419 ILRWKL--------ASTANLADLAPIRTISKGEPTHPLFSRLIGHDVPALARFLTPYGVT 470 Query: 475 MNNTNY-----NMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGG 528 + N+ + AV G +GAGKT L+ LI G +FDM +GG Sbjct: 471 YDFNNHETDVGHTAVIGGTGAGKTSLMTLLISMFQKYNPGQTFIFDMKYSLMMATVLLGG 530 Query: 529 VYLD-----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRA 582 ++D G+T+ NP + + ++R + V+ GN + ++ A++ Sbjct: 531 KHIDMGGKGGKTIGMNPVKTML-LANDDMQLRQWVEVLIGAGGNTISSNESQVIYTAIQG 589 Query: 583 SWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 + + R+ + + A SP + D+ I +G Y YF++D Sbjct: 590 LRRSPPSTWRLSALYALIAGADQDLAAKLSPYVDRTDDDEI-------GSGPYASYFDND 642 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 E + ++V +E+ G+ P L M IE R+ L I+E W +L Sbjct: 643 EDHFQL-TQIVGMEVEGILKTPQLASPFMDYAFYNIERRL---DGATPTLIYIEEAWYML 698 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 N E E RT R + TQ++ + + N +I+L Sbjct: 699 --ANKAFVEKFETWLRTFRSKRAFIVFATQSLGEIARLEN---LEGIVTNIPTQILLPAV 753 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF---VDPLSR 819 + LY D F + A + + L+ S RL + PL Sbjct: 754 KNSVHQQADLYKDVFGINDNQLDLLSRAIPKRDY---LIVKP---SVTRLVSTQMPPLLI 807 Query: 820 AM--YSSDGPDFEFVQQKRKEG 839 A+ ++ V +G Sbjct: 808 AINEATTQPSMRSAVLAAAAKG 829 >UniRef50_C3RFU1 Predicted protein n=9 Tax=Bacteroidales RepID=C3RFU1_9BACE Length = 868 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 139/865 (16%), Positives = 286/865 (33%), Gaps = 88/865 (10%) Query: 39 QFSRLLPYRDYNQESGLFMNDT-TMGFMLEAIPINGANES----IVEALDHMLRTKLPRG 93 +LP + + + + N T+G+ L + +ES I E L+ +L+ LP G Sbjct: 37 DLESVLPIQTITENAVINGNGDITVGYRLLLPEVFTLSESEAQYIHERLEALLKM-LPAG 95 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAY------YMKAAATQFPLPE 147 + EY + I +Y + + Sbjct: 96 TVIHQQNFYYTGRYHHAEYSSNALIAENNRHFNGKEILNSYTNLYVTFTNGSRNGKIRKS 155 Query: 148 GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS-ITTQTVDAQAFI 206 L + + + P K + + + EME + L + +D Sbjct: 156 ASGTSLMRK---LHYPFKQPYK-EYQQRLTEMEAFLMNFENGLSSIQQFEIRKMDDTELN 211 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 + + + +N + ++ Q +N V +S +K+ ++++ N + Sbjct: 212 NAIYDYVNLSYETPENDATQ----KSVNPMAVSESGSMKIGQQHVSILSLTNEGEHLQEL 267 Query: 267 LNFHLARNPEIAFLWNMADNYSN----LLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 H ++ + D+ + L L + I+ + + + D T + Sbjct: 268 AVPHTGKSKAYGGNIEIPDSIRSKCSMLYPVGLGLPFNHIVNIVIEITDPDATVT----- 322 Query: 323 YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALE 382 + EK + ++P ++ +E + N+ D + Sbjct: 323 AIGAEKDALNYITNFYPPAAEKQREQAAFCDEITQFDYQTAYTAFNVVLNDTDRTSLMRK 382 Query: 383 VEQDILNSFRKNGFELISPRFNHMRN------FLTCLPFMAGKGLFKQLKEAGVVQRAES 436 + GF ++ ++ N F +P A G V + Sbjct: 383 TA------LVQQGFSFMNQSSCYVENAELCNLFFCNIPGNARANYR------GFVNT--T 428 Query: 437 FNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 + G + A I+++ N N N V G SG+GK+ + Sbjct: 429 KQAICYLQKEGMYLSDEKGHIYHDRFGTPAKINLWDYPALN-NKNRIVIGPSGSGKSFWL 487 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG---ETLRFNPFANITDIDQSAER 553 I + G ++ D+G Y+S+ G Y D + FNPF + D D++ + Sbjct: 488 NNYILQSYELGRDVMIIDIGGSYRSMIALNRGKYFDSTEQKKFAFNPF--LCDRDKNGKY 545 Query: 554 VRDQLSVMASPNGNLDEVHEGL-LLQAVRASWLAKEN---RARIDDVVDFLKNASDSEQY 609 + + S + + + + + VR L EN R + D++ N+S E++ Sbjct: 546 LYIDTTDAESADDQIKTIVAIISYIWKVREPMLPAENAILRKSVIGFYDYVNNSSIGEKH 605 Query: 610 AESP----TIRSRLDE-MIVLLDQY----------------TANGTYGQYFNSDEPSLRD 648 T R+ L E + ++ +G N+ E Sbjct: 606 ERIFPTLITYRAYLKEVFSKRMTEFEKQKFEIEELLLLLEPYTDGELSFLLNATENVDIV 665 Query: 649 DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 +++ ++ + + + +L + ++ R K +IDE L ++ K Sbjct: 666 HDRLIAFDMEDASKKEYFPLVAIITLQMIVDKIKKRQ--GFAKELIIDEALDFL--QDEK 721 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 G+FI YRT R+ G+ QNI+ F + SS + N + KIIL S Sbjct: 722 FGDFIAYLYRTFRKKEGSITLAAQNIL-FLKNMPSSIKDSIIINCATKIILDHSEHRQNL 780 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 + MI + + + F +++ N + R V + + S Sbjct: 781 PEVKAVLSITDEEAYMIESLQ--RTERWREFFIKMSNDAFIFRNEVSDFAAVAFDSRQAT 838 Query: 829 FEFVQQKRKEGLSIHEAVWQLAWKK 853 ++Q E S + A+ + ++ Sbjct: 839 VVRLKQLFNESGSTYTAINRYLEER 863 >UniRef50_C1XZE7 Putative uncharacterized protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZE7_9DEIN Length = 866 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 142/749 (18%), Positives = 257/749 (34%), Gaps = 86/749 (11%) Query: 169 KKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMIN-HNPDSLYPKRRQL 227 + R + + L + L A +D Q + +N H + Y Sbjct: 162 PMEIRGLLEQAHALRDSLLGYLSRAGFEAWAMDDQEVFRLCYRFLNDHEAPAPYRIDPGY 221 Query: 228 DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY 287 L + D LK R GR + +L + +++M Sbjct: 222 ATEGTLRREPERDPQTLK----------RALGRTEIYNVARDYLHLGLDYVRMYSMYGLP 271 Query: 288 S----NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 S +LN L +++ + Q + + + + + + SV Sbjct: 272 SATQYGMLNNALIQERSYLIV-DVQHPPQGAVLQKLENRKRQAWQLNSDTSSAPESSVAN 330 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL--------NSFRKNG 395 ++ E +R + + ++ D+ E +E+ +L +R+NG Sbjct: 331 AVQDLLEALRRQEKSGEHFLRWGASL-LVRGDSVEHLDAIERIMLPRLGDMMGAKWRRNG 389 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN---PLT 452 L P LPF G + + +G+ S NV+ L Sbjct: 390 EYLAYPYSLL-------LPFS---GRSQDILFSGL-----SNNVSQASVFYGPWVRPRLK 434 Query: 453 PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAV 511 A L+ + ID+F TN+N AV G SG+GKT +Q L+ + G + Sbjct: 435 RATCLSTNRYSSFTNIDLFD--PKTTNWNTAVIGASGSGKTFTVQMLLSDAMAEGEMDLI 492 Query: 512 VFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLS--VMASPNG 566 + D Y L GG + G + N F + +E L +G Sbjct: 493 IVDKKGDYTPLVTLAGGATISIAPGAGVTLNMFDLPPGATEPSEEKLTFLQRVFHILKSG 552 Query: 567 NLDE---VHEGLLLQAVRASWLAKENR-----------ARIDDVVDFLKNASDSEQYAES 612 + DE + E L ++AVR ++ A R + DV++ L N Sbjct: 553 SPDEEIHLKEQLWMEAVRTAYQAALERLPGEEGFRLGTVTLSDVLNTLPNLGKLSGRPIE 612 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE--DRPSLLVAV 670 ++ ++ + L +T G G++ + + D +V ++ G + D P + Sbjct: 613 AEEKTLARKLAIELSVWT-QGAMGRFLDGKTNVVMGDNPVVYFDIAGFDAFDDPRVTALG 671 Query: 671 MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 + + I +R+ R PR KKL + DE + FK + YR AR + TI Sbjct: 672 ISLIAQLIYDRLNRRPRERKKLILFDEAHAV--FKIEASAALVTDLYRRARSYGAGVWTI 729 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQ-SAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQ+I D+ + ++S +IL+ +E P+ + + + G Sbjct: 730 TQSIADYQ----GPFVKGVLDSTSIFMILRVPEQEELVVQTLGLPESMVDYLATLERRNG 785 Query: 790 AAKDQWFSSFLLQVENHS---SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAV 846 + + L+ E+ R+ PL ++S D + E + EA+ Sbjct: 786 EWSELLY---FLRGEDSRLQGDILRIAPTPLDYWAFTSSARDVARRRALEAE-RGLLEAL 841 Query: 847 WQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 L SG + A W E + A Sbjct: 842 GLL----SGVDTAPYRPWFAEEQLVEETA 866 >UniRef50_Q601R8 Transfer complex protein n=7 Tax=Mycoplasma RepID=Q601R8_MYCH2 Length = 880 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 107/643 (16%), Positives = 214/643 (33%), Gaps = 74/643 (11%) Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 + + + V ++RA++ + + +D+ ++IN N Sbjct: 217 YEKNDVSLLQQVSLLRANISSTGFRARIAPLRDLLDLNLKIINFN---------DFLNDE 267 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 + N D + + + EN + + + P L A +S Sbjct: 268 EFNNIRNGDDISKYLAQNKIEW-YPENFKINDIYFSVQSINEYPFNLPLGWAAQLFS--- 323 Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGEL 351 + L + + N +LE K K A E L Sbjct: 324 -------TNSSVVWHLNRLTATEKENSFNKGAKNLESNLNDQ--KNIVQKTKTATERAAL 374 Query: 352 RQRLGSGQSSVVSYFLNITAF--CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 + + SS F + F + E+E N+ R G + ++ ++ F Sbjct: 375 EEIISIAGSSREEIFYSTFIFLNTAETKNQLKEIESQNRNNLRNIGATINPLKYRQLQGF 434 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR--NQLAF 467 + F+ + N+A +P + N + + F Sbjct: 435 ASLF--------FRFSNFLKEEIEMPASNIAFGIPFTSRNFNDGNYNIIGVSKTDYTPVF 486 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG 527 D+F + + N N + GTSGAGK+ + + L+ +V D + Y + +N+ Sbjct: 487 FDLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLDPQNEYWKIGDNLN 546 Query: 528 GVYLD---GETLRFNPFANITDID-----------QSAERVRDQLSVMASPNGNLDEVHE 573 ++ G+ FNP + ++E + L + G L E Sbjct: 547 ANRINFGGGDLTIFNPLQIQKVFNPQSKQEEAEDFNNSETIALHLQNLEKFFGILLPNLE 606 Query: 574 GLLLQAVRASW------------------LAKENRARIDDVVDFLKNASDSEQYAESPTI 615 ++ AV + L + I D++ + + TI Sbjct: 607 HKMVMAVIETINEMYKNRGFYVLFEDVCLLEPDKFPTITDLIQKFQELNFDYITDFEKTI 666 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSL 674 + L ++ G + FN +L +V+ + L + + F + Sbjct: 667 I-----LSTLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMHLEKRIYQSAFFLV 721 Query: 675 IIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 + +IE ++ +N K + ++DE R +D N +F+ K +T R++ G+ I TQN Sbjct: 722 LSFIEGKIATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTIRKYNGSLIITTQN 781 Query: 734 IVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 DF S +A+ + A N Y + + K ++L+ Sbjct: 782 PGDFAISGEAARKSEAIIENCQYAFFFNLKSNDIEKVDKLFSS 824 >UniRef50_C3QQR1 Plasmid transfer protein n=32 Tax=Bacteroidales RepID=C3QQR1_9BACE Length = 905 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 120/826 (14%), Positives = 269/826 (32%), Gaps = 126/826 (15%) Query: 106 VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYC 165 + + G ++F + + + F G P T + I+ Sbjct: 86 IAQTLGEGYAIHKQDIFIRKKFTEESDENREFLSTSYFRYFNGR--PYTDSECYLTITQE 143 Query: 166 SPSKKKSRADILEMENL---VKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYP 222 + D + + ++ + L+ A + + ++ Q + V N Sbjct: 144 VKKSRLFSFDGKKWRDFLVKIRKVHDQLRDAGVQVRFLNRQEVNEYVDRYFAMNF----- 198 Query: 223 KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLW- 281 V + KV + +++G + S + N L P + + Sbjct: 199 ------------RDKVVSMTNFKVNDECISMGDKRCKVYSLVDVDNVSL---PSVIHPYT 243 Query: 282 ----NMADNYSNLLNPELSISCP--FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYA 335 N + +L++ I + + + +Q + L+KK + Sbjct: 244 NVEVNNSSMPMDLVSVVSGIPNTEAVVYNQMIFIPNQ-------KRELALLDKKKNRHAS 296 Query: 336 KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG 395 P + ++ +++ + +V N+ + + + N F + G Sbjct: 297 MPNPGNQMAVEDIKRVQEVVARESKQLVYTHYNLVV-AMSADTDLHKCTNHLENQFSRMG 355 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL---- 451 + +N + F+ P G+ A LM + L Sbjct: 356 IHISKRAYNQLELFVNSFP-GNCYGMNPDYDRF----LTLGDAAACLM--YKERILHSEK 408 Query: 452 TPAGLLAPTYRNQLAFIDIFFRGMN---NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 TP + + IDI + N N G SG+GK+ + ++R + + G Sbjct: 409 TPLKIYYTDRQGVPVAIDITGKEGAEKLTDNSNFFCLGPSGSGKSFHMNSVVRQLHEQGT 468 Query: 509 FAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANI-TDID-QSAERVRDQLSVMAS 563 V+ D G+ Y+ LCE +GG Y+ + NPF +++ + +++ + ++ Sbjct: 469 DVVMVDTGNSYEGLCEYLGGKYISYTEECPITMNPFRINRQELNVEKTGFLKNLVLLIWK 528 Query: 564 -PNGNLDEVHEGLLLQAVRASWLAKEN--------------------------------- 589 G + + + L+ Q + + N Sbjct: 529 GSQGTVTKTEDRLIEQVITEYYDTYFNGFDGFTPPQREDLRKSLLIDERNKSGNRAESET 588 Query: 590 --RARIDDVVDFLKNASDSEQYA--------------------ESPTIRSRLDEMIVLLD 627 ARI+ V+D ++ + E+ + ++ Sbjct: 589 ELNARIETVIDEIERRRKELKVESLSFNTFYEFSVQRIPDICNENSITGIDISTYRYMMK 648 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 + G + + N + S D +V E+ ++D P L V ++ +M + Sbjct: 649 DFYRGGNHDKTLNENMDSSLFDETFIVFEIDSIKDDPLLFPLVTLIIMDVFLQKMRI--K 706 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 +K+ VI+E W+ + + + E+I+ Y+TAR+ + +TQ I D + Sbjct: 707 KNRKVLVIEEAWKAI--ASPLMAEYIKFMYKTARKFWASVGVVTQEIQDIIGSEI--VKE 762 Query: 748 AAWGNSSYKIILKQSA--KEFAKYNQLYPDQFLPLQR--DMIGKFGAAKDQWFSSFLLQV 803 A NS ++L QS + F + + ++ + +F ++ Sbjct: 763 AIINNSDVVMLLDQSKFRERFDTIKAILGLTDVDCKKIFTINRLENKEGRSFFREVFIRR 822 Query: 804 ENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQ 848 S + + Y+++ + E ++ + E S EA+ + Sbjct: 823 GTTSGVYGVEEPHECYMTYTTERAEKEALKLYKAELQCSHKEAIER 868 >UniRef50_Q8GCN3 TraE/TrsE family NTPase n=6 Tax=Mycoplasma RepID=Q8GCN3_MYCFE Length = 937 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 105/652 (16%), Positives = 226/652 (34%), Gaps = 77/652 (11%) Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 I+ + + + + ++ + N + + + ++ F + + ++ + Sbjct: 262 ISYEKLSGFELLSFLNKLNHFNKSEEDIETFLNESDIYESEYSLDRLFKYE-KVEFKSNS 320 Query: 255 LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 L+ + + + + R L + D ++ + P ++ K Sbjct: 321 LKIDDKLYSVKCAGNIPIRLNNEW-LKKLFDVSGTVVWNNFPYNDPNVV---------NK 370 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 +AN K MD + ++ ++E+E + ++ + + + + A Sbjct: 371 IIDKANKKNMDAGNLDNSIINRFGSALEEE--SIAVMIDQIQADNFKLFDSNIFVLAEA- 427 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 +N E + I N F ++ F + F FL + K L ++ + + A Sbjct: 428 ENAEELKQNNLKIKNGFTRSNFGINDLTFRQFEGFLDMSNYPLSK-LDREYYQITSINNA 486 Query: 435 ESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTG 494 + + NL PL N L + + ++F + N+N+ + GTSG GK+ Sbjct: 487 IGYPLKNL-PLNDGNNLLLGNEVGGN--DSPIVWNMFSLTSSRANHNVMILGTSGMGKST 543 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSA 551 L + ++ S L +G A++ D Y MGG +D G+ NP + I + Sbjct: 544 LTKKILTSSLAAGNIAIIIDPQAEYVKWANKMGGQIVDLGSGDGTVINPLQVKSFIAREE 603 Query: 552 ERVRDQLSVMASPN------------GNLDEVHEGLLLQAVRASW-------------LA 586 + + + + + +++E+ + +L + + L Sbjct: 604 DDANVNFNTLINNHLLWLEKFFSFIFDDMNEMKKNILQLEIIKLYQSWGIYRLKEVKELK 663 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD-QYTANGTYGQYFNSDEPS 645 + +DD++ +K + + + ++ +M LL+ ++ GT G +N + Sbjct: 664 NDGWPTMDDLIKQMKKFVAPKDHHDKEGYTKKVLDMAELLEGKFGRYGTLGALYNG-HTN 722 Query: 646 LRDDAKMVVLELGGLEDRPSLLVA--VMFSLIIYIENRMYRTPRNLKKLN---------- 693 + + +VV + L D + A + LI + ++ N KK Sbjct: 723 INIENDLVVFKTSNLIDTEGSVNARIGIMVLISLVNGFIFDNAFNNKKRINEYKEKNKIR 782 Query: 694 ----------------VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 IDE + KN +I + R+ I TQN D+ Sbjct: 783 LISKKEIQKLTRYCSFCIDEEHLYISEKNITTLNYISDTTKLVRKLDCGTIHTTQNPSDY 842 Query: 738 DSDKA-SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 S A A+ GN Y L + +LY PL + Sbjct: 843 ASSTAVEQIAKKITGNCQYSFFLGLVGDDIEAVKKLYKTAEAPLLDSEVKFI 894 >UniRef50_C3CTH0 Type IV secretory pathway VirB4 component-like protein n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTH0_BACTU Length = 622 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 99/606 (16%), Positives = 188/606 (31%), Gaps = 70/606 (11%) Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 V + + + N + P + L+ S L Sbjct: 5 VAPPSFDRSFDDCLKVGNKYVRNMVMQGFPTNVSV--------GWLDLLYSYEGDLDTAL 56 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSYAK----WFPSVEKEAKEWGELRQRLGSGQSS 361 + D E K E + + K + + R++L + Sbjct: 57 YIEPADDRTALDELTHKLTQFESQLQIETEKGNIRDITRLRNTIVQLYNQREKLEQNYEN 116 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + + + D+ E + Q + N + ++ + + LPF L Sbjct: 117 LFYIQITSNLYA-DSKEELNKESQKLDNKLKGRKVYMMPTYLRQDDGYKSALPFGKTYIL 175 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTN 479 + S + P G+ + ID + R N N Sbjct: 176 -------DSFRNFNSGALTACFPFYNSEISHETGIFCGVNLSTSTPVLIDFYDRNKLN-N 227 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETL 536 N+ V G +G+GKT + L G V+ D YK L +GG ++ Sbjct: 228 SNITVFGQAGSGKTFFVSLLTMRSALRGVRTVIIDPEGEYKPLTRALGGAHIYVAPDSKH 287 Query: 537 RFNPFANITDIDQSAE--------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 NPF T+ + +V D L+++A G L ++ + + K Sbjct: 288 FLNPFDVETEYNVDTGKEEIDLKSKVADLLNLVAVMAGGLTPEQRSIVGHNLAKVYKDKG 347 Query: 589 NRARIDDVVD-----------------------FLKNASDSEQYAESPTIRSRLDEMIVL 625 + D + D F + E YA L+ + Sbjct: 348 FTSAPDSLYDNEPYFDELTGEFSETGRKRQMPRFTDFHDEFESYARKEQ-NKELESLANA 406 Query: 626 LDQYTANGTYGQYFNSDEPSLRD--DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L + G Y + L + DA +V ++ LE+ L MF + + + Sbjct: 407 LKIFKEGGVYDMFDCYTSEELANFKDAPIVTFDISRLEE-SVLRPIGMFVSMSWTWEKFA 465 Query: 684 RTPRNLKKLNVIDEGWRLLDFKN---HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 + ++KK V DE W L++ +F+E R R+ G + +QN ++F ++ Sbjct: 466 KKNPHIKKRIVCDEAWMLVNKNMAGFEYTSQFLENCSRRIRKRNGGLLVASQNFIEFANN 525 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYN---QLYPDQFLPLQRDMIGKFGAAKDQWFS 797 + +A N+ I L+Q + + +L + L + G+ + S Sbjct: 526 E---QGKAVLTNAVVNIFLRQDSTDIDLLQDTFKLSDGERNFLLQAQRGELLIRMNGESS 582 Query: 798 SFLLQV 803 + Sbjct: 583 VAYVMP 588 >UniRef50_A6NYK4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYK4_9BACE Length = 870 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 148/835 (17%), Positives = 271/835 (32%), Gaps = 95/835 (11%) Query: 65 MLEAIPING---ANES---IVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFS 118 +LE PIN +NE I+ L+ + L ++ + DR GL E Sbjct: 53 ILEIEPINFLLRSNEEQWGIISTFASWLKISP---MRLQFKSVTRKADSDRYVAGL-EAD 108 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFI--SYCSPSKKKSRADI 176 E + +F EG LT R + +F + S Sbjct: 109 IEKEDVAACRELGE------GTIRFIQEEGSREALTRRFFLIFQYEAVRRQSDTDYGEVY 162 Query: 177 LEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQ 236 ++ + + R V + V E++ + S LN Sbjct: 163 AALQTVTQNARTYFAQCG--NSIVQPKDEDAFVAEILYMYFNRRSCVEDPFQ--SRLNRV 218 Query: 237 CVEDSFDLKVRAD-----YLTLGLRENGRNSTARILNFHLA-------------RNPEIA 278 V+ K + R + + P+ Sbjct: 219 VVDAMTAKKRVVGVDPVPKIRAVNFVAPRGLDLSHPGYIVMDGMYYTYLYIRKSGFPQQV 278 Query: 279 FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF 338 M S+L+N + L + + + L L + TS + Sbjct: 279 RGGWM----SSLINAGEGVDVDLHLRREIRGKTIDRVAQRIRLNRTKLRELQDTS--TDY 332 Query: 339 PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 + + ++Q L S + + IT +E +Q + + + ++ Sbjct: 333 EELAGSIQAGYYIKQGLSSRNEDLFYMTVLITVSAPTLDELQW-RKQQMTDLMKSMDIQV 391 Query: 399 ISPRFNHMRNFLTCLPFM-AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL 457 F + +PF+ L ++ K + A S + L DN + LL Sbjct: 392 GDCLFQQEAALRSTMPFLYLDPSLERKSKRNVLTSGAASTYMFTSFELSDDNGI----LL 447 Query: 458 APTY-RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM- 515 N L +D F + N N N +CGTSGAGKT +Q + + G + Sbjct: 448 GLNRHNNSLCIVDPFNTKV-NKNANFTICGTSGAGKTFTMQLMSLRLRMRGVQCYILAPL 506 Query: 516 -GDGYKSLCENMGGVYL---DGETLRFNPFAN---------------ITDIDQSAERVRD 556 G +K C +GG Y+ G + N +DID + Sbjct: 507 KGHEFKRACHKIGGTYIKLAPGSSACINVMEIRPTLTPEMELIDELDYSDIDSMLAKKIQ 566 Query: 557 QLSVMASP-NGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD-----FLKNASDSEQYA 610 QL + S ++ E LL +A+ ++ + + +K Sbjct: 567 QLMIFFSLLIPDMSNEEEQLLDEALVKTYANFGITHDNSSIYEDPGSGKVKTMPILGDLY 626 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAV 670 E + ++ ++ Q FN + ++ + VVL++ L+ + +L Sbjct: 627 EVLKESPLTARLATIVSRFVTGS--AQSFN-RQSNINLSNRYVVLDISELKGK--MLPVG 681 Query: 671 MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK-NHKVGEFIEKGYRTARRHTGAYIT 729 M + Y+ +++ + R KK+ IDE W+L+ N + EF + ++ R + G + Sbjct: 682 MMIALDYVWDQV-KADRTKKKMVFIDEIWKLIGGSANRQAAEFCLEIFKIIRGYGGGAVA 740 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQ++ DF + R+ NS KIIL E Y L L R I Sbjct: 741 ATQDLSDFFGLEDGRYGRSILNNSKTKIILNLEPDEAE-----YVKDVLKLTRTEIRSIT 795 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 + L+ ++ + + M ++D + E + + K S+ E Sbjct: 796 QFERG---EALISSNSNKVPVIIKASREEQQMITTDRAELEAMLNELKAVASVAE 847 >UniRef50_B6A599 Type IV secretion/conjugal transfer ATPase, VirB4 family n=2 Tax=Rhizobium leguminosarum RepID=B6A599_RHILW Length = 839 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 109/653 (16%), Positives = 210/653 (32%), Gaps = 87/653 (13%) Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + ++N + P R ++ + R +L +++ R + Sbjct: 227 CEFFYTLLNGG--RVRPIR---LSNIPIDQMLPARRTSIGNRVIHLQGDTQDDDRYAAM- 280 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 L P + + +L+ L + +LT ++ D + S Sbjct: 281 ---VSLKEYP--------PETGAGMLDYVLKLPFEIVLTQSMSFIDDMAARSRIERLDRQ 329 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 + K + R L + + + + L + K + + Sbjct: 330 MSKADEGG--------SSVQANLDIARDELARKRVAFMEHHLTVMPVAKSTAQ-LDDAVA 380 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 I N G + N + LP + L + N A L Sbjct: 381 LIGNELGALGASYVREDLNAEPAYWAQLPGNQAYIARRAL--------ISTLNCAGLSSF 432 Query: 446 VA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 A N PA + T F + + +T V G +G+GKT ++ Sbjct: 433 HAYPYGKPDGNHWGPAITIFETTSGTPFFFNFHQGDVGHT----TVFGPTGSGKTVIMAF 488 Query: 499 LIRSVL--DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAER 553 LI +VFD G + GG Y+ GE +NP + D +++ Sbjct: 489 LILQAYRVSPRLKTIVFDKDRGLDIMVRAAGGTYMALEPGEPSGWNPL-LLDDTEENRVF 547 Query: 554 VRDQLSVMASPN---GNLDEVHEGLLLQAVRASWLAK-ENRARIDDVVDFLKNASDSEQY 609 + LS M P+ NL E ++ A+++ K + R+ + L + +E Sbjct: 548 LYGLLSFMLKPSKEGENLTPQEEAIIRNAIKSVLKTKDRSYRRLSSLRALLAGSERTEG- 606 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 +I LD++ +G Y F++ + +L M+ ++ + D P++ A Sbjct: 607 -----------SLIARLDKWVGHGPYAWLFDNADDNLDISRPMIGFDMTSILDDPTVRTA 655 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 + + ++ +N++DE W+LLD + + ++ ++T R+ G I Sbjct: 656 ALLYMFHRLDAI---YDGKAPIINLMDEAWKLLD--DDEFKRTMKDYFKTIRKRNGLVIF 710 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQ+ D SS +R +S I + Y + + Sbjct: 711 GTQSADDVVQ---SSVSRTIIEQTSTNIFFANPKADENSYMEHFGLSRAEFDW------V 761 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVD----PLSRAMYSSDGPDFEFVQQKRKE 838 D L++ S R VD P + S V+ E Sbjct: 762 RNGDPSSRFMLIKQAKSSVIAR--VDMSHMPEFIKVLSGREETVREVELLLDE 812 >UniRef50_Q4A7V5 TRSE-like protein n=2 Tax=Mycoplasma hyopneumoniae 7448 RepID=Q4A7V5_MYCH7 Length = 820 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 106/644 (16%), Positives = 221/644 (34%), Gaps = 74/644 (11%) Query: 173 RADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPY-S 231 D E+ + ++ L I T+ + +++ ++N + + + + S Sbjct: 157 NKDEKELTFEINTLKQKLAHIEIETEKLKIDELLNLAISVLNPSDKFSKEEIKNMTENPS 216 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 N Q ++K + Y ++ P + + +S+ Sbjct: 217 RENIQNAFALSEIKWKPTYFQSMN--------KYFSIQGVSELPLELPPYWANNFFSSES 268 Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE--WG 349 N + + + N Y L S+ A + E ++ Sbjct: 269 N----------IVWHIQKLSDREKDKILNRAYSILSLNSEEQSASVINRRKNELEQVAIE 318 Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 + SGQ+ S FL I ++ + ++E++ + +G + + FN + + Sbjct: 319 NVVDVAASGQNIFYSTFLFIN--QANSKQELKDIERENEQIVKNSGSVIHTLIFNQLNAY 376 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA-DNPLTPAGLLAPTYR-NQLAF 467 + FK + N+A P + +L + F Sbjct: 377 VNSF--------FKYFDTLKERIEMPANNIAWGFPFSTREFNDNNYNILGTNFSDGTPLF 428 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG 527 + F++ N N+ + GTSG+GKT + + LI L G +V D + Y + + Sbjct: 429 FNQFYQKGVRKNSNLFILGTSGSGKTTITKKLIIYNLAIGNSVIVLDPQNEYSKIGKKTN 488 Query: 528 GVYLDGETLR---FNP------FANITDIDQSAERVRDQLSVMASPNG--------NLDE 570 + + FNP F + D+ + D +++ S +L Sbjct: 489 ANIIHLNSSGLTVFNPLQIRKTFNPNSSEDEDSFLNSDLIALHISKLETFFRIIFPSLKN 548 Query: 571 VHEGLLLQAVRASW---------------LAKENRARIDDVVDFLKNASDSEQYAESPTI 615 VH +L +++ + L E I D+++ +K + Sbjct: 549 VHFIAILNSLKILYQNFGFFEIKDIDITKLENEEYPIISDLIEIIKENEFDYLSDNDKKV 608 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSL 674 + + G+ FN + + K + + L + + A F Sbjct: 609 L-----IASFETDFGEYSILGRMFNDVSSTNEINTKFSIFNVAALMNLEKRVYQAAFFLA 663 Query: 675 IIYIENRM--YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 + +I+ ++ + N K + V+DEG + +D N F+ +T R++ G+ + TQ Sbjct: 664 LSFIQGQISEFYLESNRKIVLVVDEGHKFIDETNLFALNFLFDTAKTIRKYNGSLMIATQ 723 Query: 733 NIVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 N DF + +A+ + A N Y I +K+ K N LY + Sbjct: 724 NPGDFAITGEAARKSEAIIENCQYSIFFNLKSKDIEKINLLYRN 767 >UniRef50_B0T9U2 CagE TrbE VirB component of type IV transporter system n=20 Tax=Proteobacteria RepID=B0T9U2_CAUSK Length = 824 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 112/736 (15%), Positives = 240/736 (32%), Gaps = 110/736 (14%) Query: 156 RHY--RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMI 213 RH+ R F+++ +++ + + L++ + A + F+ V ++ Sbjct: 113 RHFESRYFLTFTYLPPEEAVSTAESL--LLENAPSGRGAAGMY--RAALSDFLSTVRQI- 167 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQ--CVEDSFDLKVRAD---YLTLGLRENG-------RN 261 ++ P+ +L L Y C+ + YL L ++ R Sbjct: 168 ADILTAVMPEVHELSDDETLTYLHGCISTKRHYVKAPETPAYLDAFLTDDDFQGGLLPRL 227 Query: 262 STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANL 321 + + + P + LL+ + + + D+ Sbjct: 228 GASFVRTISVRAYPATSSP--------GLLDRLNELGISYRWVCRFLPLDKEDARKAVTT 279 Query: 322 KYMDLEKKSKTSYAKWF------------PSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 K K A P ++ + LG +S+ + + Sbjct: 280 VRKRWFAKRKGVMALLKEAITREPSVLEDPDAAAKSMDADAALAILGGDYASIGYFTPTV 339 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 T D + + +++ ++ + GF N + ++ LP A L + L Sbjct: 340 TLMDTD-PDRLADRVREVESAINRVGFVCKVEDVNAVEAWIGSLPGQAYADLRRPL---- 394 Query: 430 VVQRAESFNVANLMPLVADNPL-------------------TPAGLLAPTYRNQLAFIDI 470 S N+ ++MP+ A P P + T D+ Sbjct: 395 ----VSSLNLCDMMPMSAIWPGPTRNEHLGSECAKRGHPGAQPPLMFTRTAGTTPFRFDL 450 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPL-IRSVLDSGGFAVVFDMGDGYKSLCENMGGV 529 + +T + G +GAGK+ L+ + ++ + FD G ++ GG Sbjct: 451 HQGDVGHT----MIVGPTGAGKSVLLNAIAVQWLRYPEAQVFFFDKGASSRAATLLTGGQ 506 Query: 530 YL----DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL 585 + + L F P A+I D + ++A+ + + + +R Sbjct: 507 FYALGSEESELAFQPLADIDTADDRSWTQEWVQDLVAAEGVEITPQVKEEIWSGLRNLAA 566 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 ++ + + +++ S + L +T +G +G ++ + + Sbjct: 567 GPRDQRTLTLLAATIQDHS-----------------VKAALKPFTLSGPHGHLLDASQNT 609 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 L+ E+ L S L V+ + +E R L ++DE W LD Sbjct: 610 LKAGT-WQTFEMAELMGNKSALAPVLTYIFRTLEKRF----DGRPTLLILDEAWLFLDQG 664 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + I + +T R+ A + TQ++ D SS A A + ++ L + Sbjct: 665 SFAAK--IREWLKTLRKFNVAVVFATQSLADIA---RSSIAPALIESCPTRVFLPNPDAQ 719 Query: 766 FAKYNQLYPD-QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-S 823 + +LY P Q +I ++ ++ S + + L + P S A+ S Sbjct: 720 TPQIAELYQGFGLNPQQIRIIANATPKREYYYQSM-----SGNRLFELGLGPFSLAVVGS 774 Query: 824 SDGPDFEFVQQKRKEG 839 S D + + + E Sbjct: 775 SSPGDQQLMTRLLAEH 790 >UniRef50_B3DVA0 Type IV secretory pathway, VirB4 component n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVA0_METI4 Length = 889 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 154/928 (16%), Positives = 315/928 (33%), Gaps = 151/928 (16%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYR-DYNQESGLFMNDTTMGF------ 64 +NSLV+ L+L S N + F ++ PY Y++ ++ D G Sbjct: 1 MNSLVSPLRLFIPSPLFNTKKMAV-FRDWADACPYVGLYDR----YIVDKFGGVHSFYKT 55 Query: 65 ----MLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLM-SSQLVGDRIEYGLREFSW 119 + P A + + L +L T+LP I HL + G +E S Sbjct: 56 YFPQVDIVSPSRLA--ELQDQLRLLL-TQLPHEIAQTQHLFTCNGDYGPLLEQFAAVPSD 112 Query: 120 ------SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFI----SYCSPSK 169 +A+R + T L + + + I S + Sbjct: 113 PLVESFRERKAKRLFQKMVKRKLVRIETHTVLTVAPQSRIKQTEWFLRIGGRESVEIERR 172 Query: 170 KKSRAD----ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 + S+A + ++ + ++ AS +DA+ D + N + Sbjct: 173 RISKAQFDSAVASLQAAESVFAEIMKKASARFVPLDAREIADYFFRLWNPGLAVEEAMKV 232 Query: 226 QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMAD 285 D Y + + ++ V D + +G +G + P +M Sbjct: 233 NYD-YERMPFVDSWMLQEVTVHKDMIQIGDYYHGL--------VSMVGLPLETRPRDMEK 283 Query: 286 NYSNLLNPELSISCPFI---LTLTLVVEDQVKTHSEANLKYMDLEKK------------- 329 L PF ++L + ++ K + + +++ Sbjct: 284 LTVGL---------PFRDVRVSLIVRKTEKTKEMEKLRKRIDWADQRMRLGLNLIDMLYK 334 Query: 330 --------SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 + W + +E L + + SG+ ++ L + F E Sbjct: 335 PHENRRESGIQNIEAWM-----QIEEAQNLLKDIRSGEDDLLQVQLTVH-FWHKQKEEVK 388 Query: 382 EVEQDILNSF----RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 + + +LN F R G+ + + + ++ LP + L + Sbjct: 389 KRAKILLNRFGDLSRAKGW---IEQSSLLPVLMSELPAVYAPLTRPLLVRGRM------- 438 Query: 438 NVANLMPL-VADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 A+L+PL L L +D+ + + + + G G+GK+ L Sbjct: 439 -AADLIPLCRGLESDEKPIHLFGNTTGGLVPLDLEDKRNEGASM-LYISGVKGSGKSALA 496 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDIDQSAER 553 Q ++ L + ++ D G+ Y L E GG + + FNPF T + E Sbjct: 497 QIIVLRHLRPDSWLIILDKGNSYDRLVELSGGTTIRLDMATPKCFNPFEVYTQRNSKGEL 556 Query: 554 VR----------DQLSVMA-SPNGNLDEVHEGLLLQAVRA-----SWLAKENRARIDDVV 597 + + L ++A S G + E +L+++ + + +DD Sbjct: 557 IEPSDHELIKVVNCLEILATSQRGEPLRIEEKNILESLTRQTFSNAIKNRATYVTLDDFA 616 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 + +D++ AES L + +G Y ++FN + K++ + Sbjct: 617 RQMAYRADAQFLAES-------------LKAFV-DGRYKRWFNGT-TQVHWKTKVIHFDF 661 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 + L A++ ++++ + + P K+ V E W+ N I + + Sbjct: 662 EYISKDKDLAAALIPMAVLFVSDIILSHPHVF-KMLVFGEMWQ--HVSNPATANLIIEAF 718 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 +T R+ A I +Q I+D + A A+A N I+ Q ++ ++ + + Sbjct: 719 KTYRKKRCAIIGESQAILDLVDNPA--VAKAVIQNVDTWILFPQGSEHHIEFA-VKELEL 775 Query: 778 LPLQRDMIGKFGA--------AKDQWFSSFLLQV---ENHSSWHRLFVDPLSRAMYSSDG 826 QRD++ + + W +F L+ E+ S R ++P + ++ Sbjct: 776 TKGQRDLLTHLRSCSRVHPDGEVELWREAFYLRGRGPESLSGVIRAEIEPEEYWLTTTTP 835 Query: 827 PDFEFVQQKRKE-GLSIHEAVWQLAWKK 853 DF RK +++A+ L+ K Sbjct: 836 ADFPAWDAARKAFPEEMNQALESLSAKY 863 >UniRef50_C3DUE0 Hypothetical conjugation protein n=5 Tax=Bacillus thuringiensis RepID=C3DUE0_BACTS Length = 630 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 87/478 (18%), Positives = 171/478 (35%), Gaps = 53/478 (11%) Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP 401 + + + + +++ Q V+ + + +D +E + + + G +P Sbjct: 111 QDQYDDAKAILKKIDREQQKVMLMTVVLLVSAEDLDE-LNTRCRRVESMLAAAGLRARTP 169 Query: 402 RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY 461 F T P+ + K + + + +VA P V G+L T Sbjct: 170 MFLQEEGLRTVGPWGMMENRIKDI----GARNMPAESVAAGFPFVYSGLNDGEGILLGTD 225 Query: 462 RNQLAFI-DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYK 520 + + D + R + TN N+ V G G GK+ ++ ++R G ++ D D Y Sbjct: 226 KGGGIILCDFWTRRESRTNSNLTVIGRPGVGKSTAVKKILRGEYGRGTKIIIIDPEDEYG 285 Query: 521 SLCENMGGVYLD---GETLRFNPFAN----ITDIDQSAERVRD-----------QLSVMA 562 L NM G +D + R NP + D D+ + + + Sbjct: 286 DLARNMDGDAIDCGGSQESRINPLQIRDVPLDDKDEKEKLYEEVEGNNSGPLAYHFQFLR 345 Query: 563 SPN----GNLDEVHEGLLLQAVRASWLAKE-------------NRARIDDVVDFLKNASD 605 + GN+ LL A+ A + +K + D+ L + S Sbjct: 346 TFFKLYLGNISRRDMSLLEVALEALYNSKGINWATNPQDIPNEQYPTLKDLYFILLDLSK 405 Query: 606 S--EQYAESPTIRSRLDEMIVLLDQYTANGTY--------GQYFNSDEPSLRDDAKMVVL 655 E+ + S + + + S ++ + VVL Sbjct: 406 ENVEELTKKGGDLSNVSLTGANSKDWLDLSILLRSAAVGADSFLWSGPTTINPKSDFVVL 465 Query: 656 ELGGL-EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 + L E + A ++++ + N + + R K L +DE + L+D + + +F+ Sbjct: 466 NIKNLLEANDEIRRAQFYNVLGWAWNEVSK-NRKEKVLLGVDECYLLIDPEVPETIKFLR 524 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + R++ G + ITQ++VDF +A N YKI+L Q K+ +L Sbjct: 525 NTSKRIRKYEGGLMVITQDLVDFLDPAVKRYGQALLNNPVYKILLGQGEKDIEALEKL 582 >UniRef50_Q84BZ9 Putative membrane-bound ATPase n=6 Tax=Spiroplasma RepID=Q84BZ9_SPIKU Length = 899 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 78/530 (14%), Positives = 180/530 (33%), Gaps = 51/530 (9%) Query: 303 LTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLG--SGQS 360 + + + +T N +++ K + + + E + +G Sbjct: 359 IIWNINPLNYDETKKAINSAIQ--TTQTRQVMTKSYVNTNENNYELETYYHLIDEVNGDG 416 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 ++ + N +T + + + + ++ + + +P+ Sbjct: 417 ELLKNVNILFLNYGTNKKTLSQAQTRLTKALKEMDIKPNPLWYQQFNGLKGFIPYN---- 472 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTN 479 ++ + + +A P + G+ L + D F TN Sbjct: 473 --NKVIIKKYGREMPTSTLAASFPFIDSGLYDKQGMWLGTNNMGNVVLWDQFKITSKRTN 530 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETL--- 536 +NM + G SG GKT L++ +I + G +V D Y+ LC+ G ++D Sbjct: 531 HNMFIIGASGMGKTYLLKKIINHHIKMGRKVIVIDPEREYQELCKYYDGNWIDAGDASIG 590 Query: 537 RFNPFANITD------IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 + NP + + + ++ + + L + L G + + ++ Sbjct: 591 KINPLQILDNNFIDELENTNSSPLSNHLRFLEQWFKTLYPDFNGREINLLTKYLKLLYHQ 650 Query: 591 -----------------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 ++D L+ + E+ ++ +D + + +G Sbjct: 651 FKITNNIDINKINNNDFPIMNDFYYLLEK---EYKNNENQLLKEFIDLIAT---DFLNDG 704 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMY--RTPRNL 689 Y +N +++ + +V ++ L D A + ++ I+ + R N Sbjct: 705 KYQALWNG-HTTIKFNNNFIVYDVYNLFDLDDKKTNAAQLILMLNIIKKEVKENRFKDNN 763 Query: 690 KKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS-SAARA 748 + + ++DE +D N F+ + + R++ GA + TQNI DF ++ A Sbjct: 764 EIVIIVDEAHLAIDKDNPVALNFMYQMTKRIRKYNGALVVATQNIADFVENETVLKKTTA 823 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPD--QFLPLQRDMIGKFGAAKDQWF 796 NS Y I+ + K LY ++D I + + +F Sbjct: 824 IINNSQYSFIMGLKPNDLEKVINLYKSYGGLTSAEKDYIARSVKGQGLFF 873 >UniRef50_C8WY82 Type IV secretory pathway VirB4 protein-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY82_ALIAD Length = 659 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 105/587 (17%), Positives = 207/587 (35%), Gaps = 70/587 (11%) Query: 242 FDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY--SNLLNPELSISC 299 DL AD + + E + + +++ P + ++ L + Sbjct: 46 HDLMTLADGIEMRASEIYVSPSGYTKTYYVTGLPSTVHFGYFQRFFRVGADVHISLHVE- 104 Query: 300 PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQ 359 P + + ++ T EA + E+K+ T+ K +++E + + R+ L G+ Sbjct: 105 PADSAVAMAKRTKLMTKIEAEI---LAEQKAGTN--KQIAFLQQEYQLLEKEREELRLGR 159 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 + + + + E E+ F GF L H F + P Sbjct: 160 ERIFYATIILAVSSPNRQEFEAACERIEREGFE--GFLLREAFKEHDLGFRSVAPIGENA 217 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR--NQLAFIDIFFRGMNN 477 + +AN P G+ L D + + Sbjct: 218 --------LRHPIEMTASALANSFPFTNARFSHEYGVPIGVDWSSGHLNRYDAWHPKLV- 268 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGE 534 N N + G +GAGK+ L++ L+ G V+ D Y + + +GGV + + Sbjct: 269 -NANGVIIGKAGAGKSFLVKGLVARSAAMGIRHVIVDYEGEYTPMVQALGGVVIRLDEHS 327 Query: 535 TLRFNPFAN--------------ITDIDQSAERVRDQLSVMA---SPNGNLDEVHEGLLL 577 +FNPF D+ + + + MA + + LD + Sbjct: 328 PYKFNPFELEEEEEKQADGTIRRFVDVKEKISDMERLIVSMAHLHAGHDLLDSYTRNAIN 387 Query: 578 QAVRASWLAK-----------------ENRARIDDVVDFLKN-----ASDSEQYAESPTI 615 ++ + + A+ D +V +K + + E Sbjct: 388 DMLQELYERDFGFTSDPESLYERHETWQRDAKGDRLVRRVKRPQPRFSDFYVKLEERAAS 447 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLI 675 SRL+E+ + L ++ GT G + L+ D +V +L L ++ + M ++ Sbjct: 448 DSRLEELAMRLRRFREGGTEGMFDCYSNVELQ-DVPVVSFDLSHLPEKSMARLLGMQVVL 506 Query: 676 IYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 +I + + +LKK VIDE ++L+ H + F+E +R R+ +G+ + +Q Sbjct: 507 EWIMEKFIKKNVHLKKRVVIDEAQKMLEHLYHAI--FMEDVFRRIRKRSGSAVAASQ--- 561 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 DF S RA NS KI+L+Q + + + + + Sbjct: 562 DFRKFAESEQGRAILQNSDTKILLRQDKLDKEAVIENFGLEEHEFEE 608 >UniRef50_C4G4W2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4W2_ABIDE Length = 605 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 100/593 (16%), Positives = 209/593 (35%), Gaps = 77/593 (12%) Query: 242 FDLKVRADYLTLGLRENGRNSTARILNFHLARNP---EIAFLWNMADNYSNLLNPELSI- 297 ++K++ D L LG F + P + +L + + + + Sbjct: 14 MNVKIKKDSLILGENNA--------QCFGVISYPQSAKYGWLSEITNIPGTVASISFETV 65 Query: 298 -SCPFILTLT--LVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQR 354 S F+ L + V ++ L+ + E+ K+ +L +R Sbjct: 66 NSGEFLEHLNKNISVYASEARDAKNELERLRAEQAEKSG---------------KQLLKR 110 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLP 414 + G V I + DN ET ++ + ++ + F + F P Sbjct: 111 IDIGGEQVGLVSTAIMSVAGDN-ETIGKISRRQKSAASLIKCKERLLSFRQLDAFSQISP 169 Query: 415 FMAGKGLFKQLKEAGVVQRAESFNVANLMPL-VADNPLTPAGLLAPTYRNQLAFIDIFFR 473 + + + +V P L L +D + R Sbjct: 170 TSGKNKNISSMID----RVMPLSSVVYGFPHSHGGYTDDDGYYLGMDGAGGLVILDTWKR 225 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD- 532 + TN NM V G +G GK+ ++ +I + G ++ D YK +C+ GG +++ Sbjct: 226 SGDRTNSNMVVLGINGTGKSTAVKHIILNEFMLGKRIIIIDPEREYKDMCKACGGDWINA 285 Query: 533 -GETLRFNPFAN---------------------ITDIDQSAERVRDQLSVMASPNGNLDE 570 G + NP + + A +++ + +L + Sbjct: 286 AGGKGKINPLQIKVSSKDTQDDDSYEDNEEDTEEEKLSELAIHLKNLEVFFSLYINSLTD 345 Query: 571 VHEGLLLQAVRASW-------------LAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 ++ +++ + L E+ ++D+ +++ S++E+ + + Sbjct: 346 TKLAIIKRSLIELYKIFNIDWDTDNSKLKAEDYPIMEDLYNYI--LSEAERMKDEGDDQF 403 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII- 676 + E I L + A G +N +L DA+ VVL+ L+D + + L+ Sbjct: 404 KEYEDIARLFEDVAKGGDSFLWNG-HTTLNSDAQFVVLDTKDLQDSSERIKGTEYYLLST 462 Query: 677 YIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 ++ M R R K + V DE + L+D + + F+ + R++ G+ I I+ ++VD Sbjct: 463 WMWAEMSR-DRTEKVVGVFDEAYLLIDKRVPQTLAFLRNASKRCRKYEGSMIIISHSVVD 521 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 F + +A +YK I + + QLY + + G Sbjct: 522 FLDESVKMYGQALLDLPTYKFIFGCDGENLKQTKQLYNLNDSEEELLLSKNRG 574 >UniRef50_Q3JDC9 Putative uncharacterized protein n=4 Tax=Gammaproteobacteria RepID=Q3JDC9_NITOC Length = 908 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 155/912 (16%), Positives = 308/912 (33%), Gaps = 134/912 (14%) Query: 38 PQFSRLLPYRDYNQESGLFMNDT--TMGFMLEAIPINGANESIVEALDHM-------LRT 88 P F+ LLP+ +Y ES F+ + ++G + E +P+ G + + + Sbjct: 28 PSFTDLLPWMEYLPESKTFLLEDGVSLGALFEVLPV-GCEARTPAFMTQLRDAIQIAINE 86 Query: 89 KLPRGI----PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA---YYMKAAAT 141 +P L I++ + + L + +A ++ ++ +++A + Sbjct: 87 AIPERDDAPWVLQIYVQDEPKLTQ-LNALLASYPSPTVRASDYSQHYQSVMSQHLQAISR 145 Query: 142 QFPLPEGMNLPLT-----LRHYRVFI--SYCSPSKKKSRADILE-MENLVKIIRASLQGA 193 L + + + R RV + S K + ++ E + ++ ASL A Sbjct: 146 PGGLFDDTTVTGSRWQGQQRRIRVVLYRRLISNGKSPAAIEVEEAINDVATKWIASLASA 205 Query: 194 SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQL--------DPYSDLNYQCVEDSFDLK 245 I Q + QAF + N NP L D + E Sbjct: 206 GIKVQRANGQAFYQWLLSWFNPNPPLADGNPEALLQLAPYPGDENLPFGHDFAEQLTLSM 265 Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 R+D T + T + L R P+I + + + I+ + Sbjct: 266 PRSDEATASWVFDNMPHTVVTIQ-SLRRAPDIGHFTAERQAGDQVFSLFDRLPEHTIMAI 324 Query: 306 TLVVEDQVKTHSE-ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV-V 363 TL ++ Q T + A +K + ++ S + ++ + + + G V Sbjct: 325 TLTLKPQDTTRNHIAQIKRASVGDSAEASITR---------EDAEHVEREMAQGNKLYPV 375 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFE--LISPRFNHMRNFLTCLPFMAGKGL 421 S + DN ++ + NG + + +++ LP L Sbjct: 376 SMAFYV---RGDNQKSLRNNLNRLHALLLPNGLQPIAQEADLLSLDSYIRNLPMAYDADL 432 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNY 480 K + + ++ S ++ANL+P + T GL+ + D R N Sbjct: 433 DKSRRRSRLIF---SRHIANLLPFYGRSRGTGHPGLVFYNRGAEPLVFDPLHRDDRKKNA 489 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGETLRFN 539 +M + G +GAGK+ L+ L++ ++ + + G + L G + L N Sbjct: 490 HMLILGPTGAGKSALLVYLLQQMMARHRPRIFIIEAGASFSLL-----GQHFAHHGLSVN 544 Query: 540 -------------PFA------------NITDIDQSAE--------------RVRDQLSV 560 PF N +D+S RD L Sbjct: 545 QITLNPNVDVSLPPFTDALRLLDRRHAFNPLSVDESTMEETLDEDDEIEEEGGGRDILGE 604 Query: 561 M------------ASPNGNLDEVHEGLLLQAV----RASWLAKENRARIDDVVDFLKNAS 604 M + L L+ A+ + + DVV+ + + Sbjct: 605 MEIAARIMITGGDEREDARLTRADRLLIRNAIFLAAKTVKETSRTQVITQDVVNAFQTIA 664 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL--ED 662 + + E R+R EM + + + G G +FN S + +LE+G L E Sbjct: 665 TNAELPEHR--RNRALEMGDGMALFCS-GLAGHFFNRPGQSW-PAVDVTILEMGMLAREG 720 Query: 663 RPSLLVAVMFSLIIYIENRMYRTPR-NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 L S++ +I + + R + L V DEG + N + ++ K + R Sbjct: 721 YEDQLTVAYLSMMSHINDLVERHQHDDRPTLVVTDEGH--IITTNPLLARYVVKITKMWR 778 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + + TQN+ DF A+R + + L +E + + Q Sbjct: 779 KLGAWFWIATQNLEDFPD-----ASRKMLNMMEWWLCLVMPKEEVEQIARF--KDLNDEQ 831 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GL 840 R+++ + + ++ + + R LS A+ ++ + +E Sbjct: 832 RNLLLSARKEPGK-YVEGVVLADKVEALFRNVPPALSLALAMTEKHEKAERAAIMREKNC 890 Query: 841 SIHEAVWQLAWK 852 S EAV+++A + Sbjct: 891 SELEAVYEIAQR 902 >UniRef50_C7LKR7 Putative membrane protein n=3 Tax=Mycoplasma RepID=C7LKR7_MYCML Length = 947 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 96/511 (18%), Positives = 186/511 (36%), Gaps = 49/511 (9%) Query: 302 ILTLTLVVED---QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 ++ L + D Q ++N K D K++Y K S++ +A L +L Sbjct: 396 MIVWNLGIFDENTQASLLDKSNKKETDNSTLLKSNYFKKASSIQLQA--LEYLENQLQVD 453 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 ++ + + L I DN + ++EQ L + +++ + F Sbjct: 454 KNVLTNSSLMIINVA-DNLKDLRKLEQKNLLNAKRSKININPIPFKQFEGLAQA-----S 507 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQLAFIDIFFRGMN 476 LKE+ S+NV++ P +N + + + F++ + Sbjct: 508 LITTNNLKESVA---MSSYNVSHGWPFQNENNNDNNMFILGESDSTGEPIIFNQFYKNNS 564 Query: 477 N-TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--- 532 TNYNM G+SG GK+ ++ I S L V D + Y L G +D Sbjct: 565 RRTNYNMFTVGSSGKGKSTDVKKAIVSNLAQNNKVYVIDPQNEYAKLGHKFGATIIDLGS 624 Query: 533 GETLRFNPFAN---ITDIDQSA-------ERVRDQLSVMASPNGNLDEVHEGLLLQAVRA 582 G NP + + DQ + + + + N + ++ L+++ V+ Sbjct: 625 GYNTTINPLQVQIQLFEEDQKLSIDSIINKHLEWIETFFSLINPDWNQDQLVLVMEFVKE 684 Query: 583 SWLAKE-------------NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQY 629 + K N I D++ ++N +++ E + + + L + Sbjct: 685 LYKNKGLYKLRAYKSLESFNYPIISDLIKLMRNYKFVDEFEEQRKKLTLANIIDRLSYNF 744 Query: 630 TANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL-VAVMFSLIIYIENRMYRTPR- 687 NG Y +N+ + ++ ++ L + S +F L+ +I+N+++ Sbjct: 745 EYNGKYHHIYNA-QTNIDLSNDFIIFNTQKLFNTSSSNGKVGLFVLLSFIQNKIFNNAIE 803 Query: 688 --NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD-SDKASS 744 N + VIDE +D N +F+ +T R+ I TQN DF S + Sbjct: 804 FANTNTVLVIDELHMYIDPNNPATLDFVYSMTKTVRKFNAGMILCTQNPSDFLGSSMITK 863 Query: 745 AARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 A A N Y K+ ++ Sbjct: 864 KAEAILQNCQYAKFFGLKQKDLEAVIDMFKS 894 >UniRef50_Q98QH8 TRSE-LIKE PROTEIN n=1 Tax=Mycoplasma pulmonis RepID=Q98QH8_MYCPU Length = 853 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 100/649 (15%), Positives = 243/649 (37%), Gaps = 69/649 (10%) Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 D ++ N ++ I L+ A + I+++ ++ K +LD Sbjct: 216 YSIDKEKLSNEIEKISLMLKIAGFENFQLSNVDQINLISKINFF-------KNLELDSEY 268 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 N + + +LK + ++ + + +N ++ E + SN+ Sbjct: 269 LENTNNI--NENLKSKFEFDKFEINKKHLKINDYFVNL---QSVEEFPFEILPGWASNIF 323 Query: 292 NPELSISCPFILTLTLVVEDQVKT-HSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGE 350 + ++ I V EDQ K ++A + K + + E Sbjct: 324 KSDSTV----IWHFNSVEEDQAKVLINKAIINSRVNSINVKNKVD--IEKEKFIIHNFEE 377 Query: 351 LRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFL 410 L +++ G+ S+ + + + ++I N+ ++ + + F Sbjct: 378 LAKKIAFGKESLKRSSIIFINKSTNKKDLIKLQNENIKNA-NLINIKINNCLYTQFNYF- 435 Query: 411 TCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL-LAPTYRNQLAFID 469 F+ K AES+ P + L L T +++ +D Sbjct: 436 -SKSFLKASSFDKNELFLPADTFAESW------PFSTSSVNDGNSLFLGKTEQDENIILD 488 Query: 470 IFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGV 529 IF + + N+N + GTSG+GK+ L + ++ + + SG ++ D + Y + + + G Sbjct: 489 IFTKNDDRKNFNTFILGTSGSGKSTLAKKILANQITSGNKVIIIDPENEYATFSKRLNGE 548 Query: 530 YLD---GETLRFNPFANITDI--------DQSAERVRDQLSVMAS--PNGNLDEVHEG-- 574 ++ NP I + + +++ ++ +L + Sbjct: 549 NINLNINSDKSLNPLEIIDNFLDDFETSKNNHLMWLKEWFKILYKELNEEDLRRIIFNVN 608 Query: 575 ------LLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD- 627 + L ++ ++ ++ I D++ LK+ D L ++I +L+ Sbjct: 609 LLYSDEIFLSKIKDKSISSKDFPIISDLIKILKSNDD-----------KSLKKIINILEF 657 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR--PSLLVAVMFSLIIYIENRMYRT 685 + NG + + +N + +L + +VV+ + + + L+ +F+++ +I+ + Sbjct: 658 DFENNGKFSKLYNKSK-NLNFENNLVVINVKDIYETTSKEFLINSLFTILGFIQREINLN 716 Query: 686 PRNLKKLNV-IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD-SDKAS 743 +KL + DE +D N + F+ + + R++ G+ I TQN DF+ + S Sbjct: 717 RFKKEKLVIFFDEAHLFIDKDNLEALNFLFRTIKRIRKYNGSVILATQNPSDFNLEGEVS 776 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ--FLPLQRDMIGKFGA 790 + A N+ Y L +++ + ++++ ++ ++ K Sbjct: 777 RKSLAIISNTQYTFFLNLRSEDISNVSKMFSSTGGISEEEKKILTKAKK 825 >UniRef50_C0BU73 Putative uncharacterized protein n=2 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU73_9BIFI Length = 511 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 97/533 (18%), Positives = 183/533 (34%), Gaps = 58/533 (10%) Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 ++TLV + + + K+ + + ++ G+LR L S +V Sbjct: 6 SMTLVRRKNAEVKMQVMDQRRKNRKQGLDPDDLPD-DLADQQEQLGQLRDELRSTNQRLV 64 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + + + E +++ S +F M LP Sbjct: 65 D-SIIVIGVSAASQEELEVACRNVKAKVNAQSCTAESLKFMQMEGLTAELPLGNNP---- 119 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNYN 481 + + + + A L+P P GL + D ++ N N Sbjct: 120 ----LPMKRTLTTNSAAILIPFTTQEVFEPHGLFYGSNARSGNPILAD----RRSHMNSN 171 Query: 482 MAVCGTSGAGKTGLI-QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLR 537 V GTSG GK+ + Q + L+ +V D Y +L GG + G R Sbjct: 172 GFVLGTSGGGKSFTVKQEIAGMFLNRDDEVIVIDPEREYLALAAAFGGQIIQISAGTGTR 231 Query: 538 FNPFANITDIDQSAERVRD-------QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 NP + + D +++ V+D + + LD + +GL+ Q V + N+ Sbjct: 232 VNPMDIVLEDDSASDPVKDKTNNVVSMIGALIGGIDGLDPLQKGLVDQCVSNLYTRYRNQ 291 Query: 591 ------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + D+ D L+ D + L+ Y G FN + Sbjct: 292 GGGVVQPTLQDLHDELQAGGDQVSRY-----------LADALNPYITGSMSG--FNG-QT 337 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN-LKKLNVIDEGWRLLD 703 ++ + V ++ GL L M +I + NR+ R N + +DE R Sbjct: 338 NVDLSNRFTVFDVSGLSG--ELRTFGMMVVIDQVWNRVIRNKANGRRTWLYVDEFHRF-- 393 Query: 704 FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 F N + Y+ AR++ ITQN+ + + AR NS + ++L Q++ Sbjct: 394 FSNQYAAAQFKDIYKRARKYGLGVTGITQNVEEILDLQD---AREMLSNSDFLMLLSQNS 450 Query: 764 KEFAKYNQL--YPDQFLPLQRDMIGKFGAAK-DQWFSSFLLQVENHSSWHRLF 813 + +L ++ ++ G K + F ++ +RL+ Sbjct: 451 TDADALCELLTLSEEQRQYFTGVLPGQGLMKIGSAYVPFDGRIPAGGDLYRLY 503 >UniRef50_UPI0001BC40AC conjugal transfer ATPase TrbE n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC40AC Length = 867 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 119/757 (15%), Positives = 243/757 (32%), Gaps = 91/757 (12%) Query: 120 SGEQAERFNAITRAYYMKAAATQFPLPE---GMNLPLTLRHYRVFISYCSPSKKKSRADI 176 E+ + + Y P + +L V I++ K ++ Sbjct: 130 EREEFFKSGHHYESDYYITFTWLTPTDQLQKAKSLFFKKTDQEVIINFVEEHLKYYNQEL 189 Query: 177 LEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPD------------------ 218 ++ L+ I + + + +++ NP+ Sbjct: 190 TKIYALLSDILQE-------CRILSIDEVVSFYHSLVSDNPELQLKAPRAFYYKGELIAT 242 Query: 219 -SLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEI 277 +L K ++ ++ + + D + +T G+ I L + P Sbjct: 243 GNLIEKYKETLQQEEIRTELLPVLLDSYLYDSGITGGIEPKIGKYH--IRTVSLLKYP-- 298 Query: 278 AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKW 337 D +L+ ++ + ++ D + E + + ++ Sbjct: 299 ------GDAIVGILDELNRVNIEYDWCSRYIMMDTLTAKKELEKYFDRWDSARESFKTLL 352 Query: 338 FPSV-EKEAKEWGELRQR----------LGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 S+ + E KE R L ++V Y + ++ E + Sbjct: 353 KTSLFKMEGKENDAAASRAWQIRKEKANLEQDYNTVGYYTFTVVLKGENKAEVE-KRALL 411 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + GF FN + +L+ +P + K L+ + V N Sbjct: 412 VKTILNAKGFTAKIENFNALEAYLSTMPGNL-LNVRKPLQNSLVFGNLLPLNAVWAGDAW 470 Query: 447 ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 + TP L T N +++ F + +T + G +GAGK+ L+ L L Sbjct: 471 NKHLNTPPLLYCQTIGNTPFRLNLHFGDVGHT----IIIGPTGAGKSVLLATLHAQFLAY 526 Query: 507 G-GFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFANITDIDQSAERVRDQLSVMAS 563 + FD G + L + GGV+ D + +RF P + L ++ Sbjct: 527 PKAKVIAFDRGASTRVLNKAAGGVFYDLGEDNIRFQPLRYCDQEKEREWCQEWILGLLEE 586 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 + + + +A+ + ++ VD + + ++ Sbjct: 587 NTLTITPDIQTYVWKALTNLAKLPIEKRTMNSFVDL---------------VGGQSRDIK 631 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L Y G + +YF+ +E L+ ++ V E+ + + +++ +M L I+ +M Sbjct: 632 NALQSYYGKGPFAKYFDGNEEFLQ-ESLYTVFEMEKVMEHKNVITPLMEYLFHLIDTKMI 690 Query: 684 RTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS 743 L +DEGW L KN + IE RT R+ + + TQN + S Sbjct: 691 DGI--SPMLLTLDEGWAFL--KNKRFSGKIEDWERTLRKKNVSIVFTTQNPDEVLE---S 743 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF--LPLQRDMIGKFGAAKDQWFSSFLL 801 A +I L + A+ Y F + D++ K +F Sbjct: 744 DIKAAILNQCYTRIFLP-NPNAKAEIQAGYYKIFGLNDTEIDILQNSTPKKQYYF----- 797 Query: 802 QVENHSSWHRLFVDPLSR-AMYSSDGPDFEFVQQKRK 837 + S L + PL + +S G D E ++ Sbjct: 798 KNPKGSRLFELALSPLELCYLANSSGKDQEKCKELSN 834 >UniRef50_A3EW83 Putative uncharacterized protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW83_9BACT Length = 834 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 129/816 (15%), Positives = 251/816 (30%), Gaps = 88/816 (10%) Query: 85 MLRTKLPRGIPLCIHL---MSSQLVGDRIE--------YGLREFSWSGEQAERFNAITRA 133 + LP G L + + GD + G A Sbjct: 61 LFLHHLPEGWGLQFRVRTRIGVPADGDVLAPRWCREPFAGSPSSREEDPPAWYLGERHHH 120 Query: 134 YYMKAAATQ------FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKI-- 185 + + T+ PE + + Y S+ PS+ M +L+ Sbjct: 121 FLNRTLRTRELTLALISFPEKEKIRVRPSFYPRRESFTRPSRFLRGTHEKRMADLLDTGA 180 Query: 186 -IRASLQGASITTQTVDAQAFIDIVGEMINHN-PDSLYPKRRQLDPYSDLNYQCVEDSFD 243 + L G I + +D + + ++N + P L+ DP L+ + Sbjct: 181 LLEQLLPGGGIEAERMDGTGLREHLSAILNPSLPTRLWSPSP--DPRMTLSEELAH--TS 236 Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFIL 303 D L + G +P+ L + ++ + L Sbjct: 237 FTETPDGLVARHPDGGVLHGRMQSLRSWPSDPDRDTL-ALFLEEADFSHD---------L 286 Query: 304 TLTLVVEDQVKTHSEANLK---YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 L L + KT L + + + + G Sbjct: 287 VLNLWKPPRKKTLDAVQSHMTVSRFLGLLLPGRSYRLENDQRQRERFLEAAFEDDREGGD 346 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKN-GFELISPRFNHMRNFLTCLPFMAGK 419 + +F DN E+ Q++ ++ G L + FL+ LP Sbjct: 347 PFAVHLC--LSFWSDNESDLTEMGQELFRAYSSVPGTLLAHEPYRQWPLFLSGLPLQTDA 404 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNT 478 + +G + +P+ +P + ++ +D + Sbjct: 405 CDRWETILSGSLPL--------FLPVWDKSPDDENPWFWSHNHLDEAVGLDFWNPFYP-- 454 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSG--GFAVVFDMGDGYKSLCENMGGVYLD---G 533 N+N + G+SG+GK+ + L+ L A+V + G+ ++ C G Y+ G Sbjct: 455 NHNGLILGSSGSGKSFASKMLLGQFLSQNENHEAIVVESGEDFEKFCRFFKGRYVKIDLG 514 Query: 534 ETLRFNPF----------ANITDIDQSA-ERVRDQLSVMASPNGNLDEVHEGLLLQAVRA 582 NPF N D + L +P+ + +H +LL V Sbjct: 515 GAFSLNPFPERFRLLAGRKNGDRYDPDILGLLGSVLETFLTPSFPVGPLHRRILLACVET 574 Query: 583 SW---LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 + + R + + L ++ E+ + M +L+ + A G Y Sbjct: 575 IYDRLEDDKRRPVLSMLAQELLAFRGKDREDETLSY-----AMGKVLESW-ATGIYQDLV 628 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 N ++V +L LE +L V + R+ + K V DE Sbjct: 629 N-HPGGFDYTERLVAFDLSALESHGALKGIVFAFIGSLSLFRLREGGADRKLYLVFDEAH 687 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 R+L EF+ YRT R+ G + ITQ+ D ++ A N+ + + Sbjct: 688 RILRELKGT--EFLSNLYRTVRKWGGGVVAITQSPADLLEEE---LAAGLLNNTFWTWVF 742 Query: 760 KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSR 819 + +L F ++ ++ + FS L++ RL PL+ Sbjct: 743 PL----ANGHERLAELGFDEREQSLVHSLERVRGA-FSEGYLRIGTDGRILRLEAFPLAF 797 Query: 820 AMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 + + + ++ K+ E + L+ + G Sbjct: 798 WLGTRSPDEDRTFREAEKQHGGFLEGLRFLSRRGEG 833 >UniRef50_D1JWZ2 Putative uncharacterized protein (Fragment) n=2 Tax=Bacteroides RepID=D1JWZ2_9BACE Length = 627 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 102/593 (17%), Positives = 202/593 (34%), Gaps = 63/593 (10%) Query: 295 LSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQR 354 L + I+ + + + D T + + EK + ++P ++ +E Sbjct: 59 LGLPFNHIVNIVIEITDPDATVT-----AIGAEKDALNYITNFYPPAAEKQREQAAFCDE 113 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN------ 408 + N+ D + + GF ++ ++ N Sbjct: 114 ITQFDYQTAYTAFNVVLNDTDRTSLMRKTA------LVQQGFSFMNQSSCYVENAELCNL 167 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFI 468 F +P A G V + + G + A I Sbjct: 168 FFCNIPGNARANYR------GFVNT--TKQAICYLQKEGMYLSDEKGHIYHDRFGTPAKI 219 Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG 528 +++ N N N V G SG+GK+ + I + G ++ D+G Y+S+ G Sbjct: 220 NLWDYPALN-NKNRIVIGPSGSGKSFWLNNYILQSYELGRDVMIIDIGGSYRSMIALNRG 278 Query: 529 VYLDG---ETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL-LLQAVRASW 584 Y D + FNPF + D D++ + + + S + + + + + VR Sbjct: 279 KYFDSTEQKKFAFNPF--LCDRDKNGKYLYIDTTDAESADDQIKTIVAIISYIWKVREPM 336 Query: 585 LAKEN---RARIDDVVDFLKNASDSEQYAESP----TIRSRLDE-MIVLLDQY------- 629 L EN R + D++ N+S E++ T R+ L E + ++ Sbjct: 337 LPAENAILRKSVIGFYDYVNNSSIGEKHERIFPTLITYRAYLKEVFSKRMTEFEKQKFEI 396 Query: 630 ---------TANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIEN 680 +G N+ E +++ ++ + + + +L + ++ Sbjct: 397 EELLLLLEPYTDGELSFLLNATENVDIVHDRLIAFDMEDASKKEYFPLVAIITLQMIVDK 456 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 R K +IDE L ++ K G+FI YRT R+ G+ QNI+ F + Sbjct: 457 IKKRQ--GFAKELIIDEALDFL--QDEKFGDFIAYLYRTFRKKEGSITLAAQNIL-FLKN 511 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 SS + N + KIIL S + MI + + + F Sbjct: 512 MPSSIKDSIIINCATKIILDHSEHRQNLPEVKAVLSITDEEAYMIESLQ--RTERWREFF 569 Query: 801 LQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 +++ N + R V + + S ++Q E S + A+ + ++ Sbjct: 570 IKMSNDAFIFRNEVSDFAAVAFDSRQATVVRLKQLFNESGSTYTAINRYLEER 622 >UniRef50_B0T8Q5 Putative conjugal transfer protein TrbE n=2 Tax=Alphaproteobacteria RepID=B0T8Q5_CAUSK Length = 812 Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 112/712 (15%), Positives = 231/712 (32%), Gaps = 101/712 (14%) Query: 160 VFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDS 219 +F+ + ++ RA + + + A +QG + + A + + + Sbjct: 138 LFVEGRAQAEIDWRAQLTGFVDRSDRLLALIQGLAREAAWLSDAATLSFLHGAVTTARQD 197 Query: 220 LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAF 279 + + + + Q +E + ++ +L + + P Sbjct: 198 VRVPETPMHLDALVATQALEGGLEPRLGGAHLRI---------------LTIVGFPS--- 239 Query: 280 LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA-NLKYMDLEKK--------- 329 LL+ ++ + + + D+ + ++ K+ Sbjct: 240 -----QTLPGLLDELNRLAFAYRWSTRALCLDKADANRLIGKIRRQWFAKRKSIGVLLQE 294 Query: 330 --SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDI 387 ++ A +A E Q LG + ++ + +D + ++ Sbjct: 295 ALTQQPSALVDSDAANKAGEADLALQDLGGDAVAYAYVTASLVVWDEDADLADAKLAL-A 353 Query: 388 LNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 F +I R N + +L LP + + N+A++ PL A Sbjct: 354 EKVIAGRDFSIIKERINAVEAWLGTLPGQTYANV--------RQPPLSTLNLAHIAPLSA 405 Query: 448 DNPL--------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 P L+A T + + + + +T V G +GAGK+ L+ L Sbjct: 406 VWAGPSSNPHLGGPPLLMAKTEGSTPFRLSLHAGDVGHT----LVVGPTGAGKSVLLALL 461 Query: 500 IRSVL-DSGGFAVVFDMGDGYKSLCENMGGVYLD---------GETLRFNPFANITDIDQ 549 +G V FD G ++ MGGV+ D + P + + D + Sbjct: 462 ALQFRRYAGARIVAFDFGGSIRAAALGMGGVFHDLGGVLLDAERSPVALQPLSRVDDPAE 521 Query: 550 SAERVRDQLSVMASPNGNL-DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQ 608 D ++V+ S G + + A+ + A + +V L Sbjct: 522 RVWA-SDWIAVLLSGQGVVVTPAVRDHIWSALASLASAPIEERTLTGLVALLPTL----- 575 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 ++ L YT G +G+ ++D +L A + E GL P Sbjct: 576 ------------DLKSALTPYTLAGPWGRLLDADFEALAAGA-VHAFETEGLLGTP---- 618 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 +++ Y+ +R+ R L +IDEGW L + G + + +T R+ + + Sbjct: 619 -AAPAVLAYLFHRIERDLDGRPTLILIDEGW--LALADPAFGAQLREWLKTLRKKNASVV 675 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 TQ++ D D AS A + +I L + +Y L ++ I Sbjct: 676 FATQSLTDID---ASPIAPVIVESCPTRIFLPNPRALEPQSAAIYARFGLGARQVEILSR 732 Query: 789 GAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRKEG 839 A K ++ +Q L + P++ A +S D + Sbjct: 733 SAPKRDYY----VQSRAGERLFDLGLGPVALAFCAASSKTDQADIAAVLAAH 780 >UniRef50_B9JPS0 Type IV secretion protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS0_AGRRK Length = 814 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 133/785 (16%), Positives = 249/785 (31%), Gaps = 88/785 (11%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 +S H++R ++P I + + + +R L + T Y Sbjct: 78 DSRFAVYSHIVRRRIPPDIGGAFDIPFCKNLDERYMASLADSR----------MYTNELY 127 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 + F G+ L + H+R + + D ++ L + + ++G Sbjct: 128 LTIIRRGFQGRVGLADAL-MSHFR-----KAAGMSEQALDREALQELRQHVANIVKGMEH 181 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + ++ E + + L L+ +N D + +T G Sbjct: 182 YGVRI----LKAVLRE-YSVASEPLEFLAMLLNGGQQVNMALPRMPLDQYLPTRRITFGR 236 Query: 256 R----ENGRNSTARILN-FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 R G + R + P + +++ L F+++ + ++ Sbjct: 237 RMFEMRGGSDDDTRFGAMLSIREYP--------PYTAAGMIDGLLKAPGEFVVSQSFALQ 288 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 D+ SE + + + + S+E + L +G+S + + L + Sbjct: 289 DRAPILSEMDRIERQI-----SVSDERGTSLESA---ISIAKDELVNGRSVMGYHHLTVM 340 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 A + + Q I + G ++ N F LP + L + Sbjct: 341 AL-GNTIKETESSAQAITKELQNAGMVVVREDLNAEPAFYAQLPGNFAYIARRALISSRN 399 Query: 431 VQRAESF-NVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSG 489 S+ N A P A N PA L T F + + N V G +G Sbjct: 400 FCGLASYHNFALGKP--AGNHWGPAVSLLQTTSMTPYFFNFHKGEVG----NFIVTGPTG 453 Query: 490 AGKTGLIQPLIRSVLDS--GGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANI 544 +GKT + L+ + + FD G + GG Y G FNP + Sbjct: 454 SGKTVALLFLLSQAMRARPQPRCAFFDKDRGGEIFIRACGGQYEVLQPGMASGFNPLQ-L 512 Query: 545 TDIDQSAERVRDQLSVMASPN---GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 D + V D LS + P L E +L +AV + DV+ L+ Sbjct: 513 EDSPDNRAFVHDLLSYLVRPKNEAEKLSAEQEKILARAVDHIFNVPIRERLFSDVIHLLR 572 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 + + D++ + + T G FN+ D + +L + Sbjct: 573 GGEAAGR-----------DDLASRFEAWCD--TRGWLFNNPVDLWNSDRGVFGFDLTAVL 619 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 D P + A + + I + +DEGW+LL + K G FI +T R Sbjct: 620 DDPEIRTAALGYIFFRIGQ---MLDGERPMMLFVDEGWKLLG--DDKAGAFINDQLKTIR 674 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + G TQ+ D + S A S I + Y + ++ Sbjct: 675 KKNGIVGIGTQSARDITT---SRIAHTLLEQSPTNIFFPNPKADRESYVTGF--GLSEVE 729 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKRKEG 839 + + + Q FL++ ++ S RL + P + S ++ R Sbjct: 730 FEWVKSTSSTSRQ----FLVKHDHDSVIARLDLSGLPDFIKVLSGRAETVAECERLRHRH 785 Query: 840 LSIHE 844 E Sbjct: 786 GDAPE 790 >UniRef50_C4XEH5 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEH5_MYCFE Length = 700 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 101/671 (15%), Positives = 240/671 (35%), Gaps = 64/671 (9%) Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 ++ +++ S + I V ID + N + ++ Sbjct: 12 YANEMNKLKQYENEFIKSFETTKIPLNVVTGMELIDFANMIFKKNISKSDKQNYFVEELD 71 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGR--------NSTARILNFHLARNPEIAFLWNM 283 + ++ + D + L+ + + ++ + E + Sbjct: 72 TELTKELDMKMQGQKLNDKVIKKLQSDKEYKLISLLAPERVEFNSKYIKVDNEYLSFQTL 131 Query: 284 ADNYSNLLNPELSISCPFILTLTLVVED----QVKTHSEANLKYMDLEK-KSKTSYAKWF 338 D N L +C + +LV+ + T + K M L + ++T Sbjct: 132 VDF--NSLQINEGWACDLFNSESLVIWNLKPINESTKQKILDKAMSLNEANAETKSNFKM 189 Query: 339 PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 + E K EL + + ++ + K ++ +N+ +K + Sbjct: 190 QKISVEQKVLDELVDFINVQKMNLFDSNIIFVNQSKTLEGIKDLETKNDINA-KKAFANV 248 Query: 399 ISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL- 457 + + + + G+ S N+ P ++++ L Sbjct: 249 YKMHYLQKQALQNSI------FIKDDFLNNGI--EMSSRNIVYGWPWISNSLNDGNNFLL 300 Query: 458 -APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 T + D+F + + T+++M + G G+GK+ + G ++ D Sbjct: 301 GFTTTSSSPVIFDLFKKTKDRTSFSMIIWGVPGSGKSATTSKIALHQFVVGNEVIIIDPQ 360 Query: 517 DGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSV------------- 560 YK LC+ + G +++ G + NP +I++ +V D+L + Sbjct: 361 REYKDLCKKLDGNWIEMGKGLETKINPLQINYEIEKDNIKVSDELLISNHTKMVKEFFSL 420 Query: 561 ---------MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE 611 + N L+E + ++ ++ L + + D + FLK+ ++ AE Sbjct: 421 LYPDLDARDLRVANFLLNEFYLSNKIKNIQK--LKNTDFPTMKDYIKFLKSYKFKDKKAE 478 Query: 612 SPTIRSRLDEMIVLLDQ-YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR--PSLLV 668 + L+++ ++ DQ + NG + +N ++ + + V++ L + + Sbjct: 479 -LYYKDSLNKLSIIFDQDFNNNGIFSNLYNG-HTNINFNKTLTVIDTYNLINNIASNEGQ 536 Query: 669 AVMFSLIIYIENRM---YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 A ++ ++ Y+ NR+ + + K ++DE R ++ N EF+ +T R++ G Sbjct: 537 ASLYLILSYVRNRISNNFFENKTRKICLIVDEAHRFINANNMSSLEFLFDTVKTIRKYNG 596 Query: 726 AYITITQNIVDF-DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY--PDQFLPLQR 782 + I TQN DF SD+ + + N Y +I +Q+ +Q+Y ++ ++ Sbjct: 597 SVILTTQNPSDFELSDEVMNLTKGMVENIQYTLIFRQNQNGVNAISQMYKSKNELTNWEK 656 Query: 783 DMIGKFGAAKD 793 + + Sbjct: 657 NFLTSAPIGNG 667 >UniRef50_A8F0L1 VirB4 n=48 Tax=Rickettsiales RepID=A8F0L1_RICM5 Length = 814 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 122/830 (14%), Positives = 280/830 (33%), Gaps = 113/830 (13%) Query: 25 SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANES 77 + A E+ + P S +PY+ + + + D ++ GF E A++ Sbjct: 15 TRAAKELRSQQERPT-SHFIPYKCHWDSNTILTKDNSLLQVIKINGFSFET-----ADDE 68 Query: 78 IVEALDHMLRTKLPRGIPLCIHLMSSQL------VGDRIEYGLREF--------SWSGEQ 123 ++ ++ L I + + + D E+ ++ G + Sbjct: 69 DLDIKKNIRNALLKNMASGNIIMYFHTIRRRKAVIFDDTEFTYDPTVKVPNDFITYLGAE 128 Query: 124 AERFNAITRAYYMKAAATQFPLPEGMN---LPLTLRHYRVFISYCSPSKKKSRADILEME 180 + +A R+++ + + P+ + LR R S + + + ++ Sbjct: 129 WRKKHAGARSFFNELYVSILYKPDTGGIAIVEYFLRKLRQ-KSNKTAWENDMKEMKENLQ 187 Query: 181 NLVKIIRASLQGAS---ITTQTVDAQAF---IDIVGEMIN--HNPDSLYPKRRQLDPYSD 232 + + + + + + + ++ ++ + +IN +P + R +D Y Sbjct: 188 EMSTRVVNTFRSYGARLLGVRQTQSGSYCEILEFLSSLINCGDSPGPIALPRGTIDEYLP 247 Query: 233 LNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLN 292 + + + R A +++ L + + + + Sbjct: 248 THRLFFDSRT----------IEARSPLGKKYAGMISI----------LEYGPNTSAGIFD 287 Query: 293 PELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELR 352 L + F++T + V ++ L+ + + + + E Sbjct: 288 GFLQMPFEFVMTQSFVFVNRTVAIGRMQLQQNRMIQSGDKAT--------SQIAEINTAL 339 Query: 353 QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 SG + + L++ +N + ++ +G + + + N ++ Sbjct: 340 DMATSGDIAFGEHHLSL-LCSANNIKALEDILSMAAVELSNSGIQPVREKVNMEPSYWGQ 398 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL--VADNPLTPAGLLAPTYRNQLAFIDI 470 LP + K SF + PL + DN + T + + Sbjct: 399 LPGNMDYIVRKSTINT---LNMASFASQHNYPLGKIRDNHWGEYVTVLDTTSGTPFYFNF 455 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 R + +T + G +GAGKT L+ L FD G + + GVY Sbjct: 456 HVRDVGHT----LIIGPTGAGKTVLMNFLCAEAQKFKPRMFFFDKDRGAEIFIRALNGVY 511 Query: 531 --LD-GETLRFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLA 586 +D G FNP + D ++ + + V+ + NG +L +L QAV ++ Sbjct: 512 TVIDPGLKCNFNPLQ-LEDTSENRTFILEWFRVLVTSNGESLTAQDNKILSQAVSGNFRL 570 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 ++ R+ +V+ FL + + + + G++ + F+++ + Sbjct: 571 EKKDRRLSNVIAFL--------------GIDTPNSLASRIAMWVGKGSHAKIFDNEIDDI 616 Query: 647 RD-DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 A++ ++ L P L V+ + I + K + V+DE W L+D Sbjct: 617 DLQKARVFGFDMTELLKDPVSLAPVLLYIFHRIN----ISLDGQKTMIVLDEAWALID-- 670 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 N I+ + R+ I TQ++ D S + ++ +I L Sbjct: 671 NPVFAPKIKDWLKVLRKLNTFVIFATQSVEDAAK---SRISDTLIQQTATQIFLPNL--- 724 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 K +Y F+ QR+ I + FL++ + ++ +D Sbjct: 725 --KATDIYRSAFMLSQREYILIKTTDPTTRY--FLIKQGIDAVVAKVSLD 770 >UniRef50_C7I4D6 CagE TrbE VirB component of type IV transporter system n=1 Tax=Thiomonas intermedia K12 RepID=C7I4D6_THIIN Length = 816 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 101/583 (17%), Positives = 193/583 (33%), Gaps = 70/583 (12%) Query: 284 ADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 +++ +L+ + + + + D + N +K K+ + Sbjct: 248 PESFPGILDMLSRLPVSYRWSSRFIYLDPGQAEKTLNKYRSKWAQKRKSMMNMLRENAGG 307 Query: 344 EAKEWGELRQRLGSGQSS----------VVSYFLNITAFCKDNNETALEVEQDILNSFRK 393 +A R+ + + Y+ ++ ++ E E ++++ Sbjct: 308 QATHINADADRMANDAVQALAEASSGMVLFGYYTSVLLLSHEDPEILDESTREMVKLTLN 367 Query: 394 NGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN---- 449 GF N +L LP + + + + N+A+L+PL A Sbjct: 368 RGFGARVEDVNAAEAYLGTLPGNTAANVRRPI--------LHTLNLAHLLPLTAVWAGPE 419 Query: 450 --------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL-I 500 P +P L A T + + + + A+ G +GAGK+ L+ + Sbjct: 420 RNPCPFYPPNSPPLLQAKTDGGTPFTLSLHAGDLG----HAAILGPTGAGKSTLLALVAA 475 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLRFNPFANITDIDQSAERVRD 556 + G FD G LC GG + D L F P + + ++ Sbjct: 476 QQFRYPGAQVFAFDKGYSMLPLCWAAGGEHYDIAGEQGDLAFCPLGRVDEPNERVWAAEW 535 Query: 557 QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIR 616 + + H L +A+ + EN A+ + +FL D Sbjct: 536 LEQLCELQGVRMLPHHRQELFRAITQLGASTENMAQ-RTLTNFLVLLQD----------- 583 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR-PSLLVAVMFSLI 675 + L YT G G +++ SL D V E+ L ++ L++ V+ L Sbjct: 584 ---QSLREALQAYTLRGMAGHLLDAETDSLGQDV-FQVFEMEHLMNKGDKLVLPVLTYLF 639 Query: 676 IYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 IE R + L ++DE W +L I + + R+ A + TQ++ Sbjct: 640 HRIEQRF----KGQPTLLILDEAWIMLSH--PAFKAKIREWLKVLRKANVAVVFATQSLT 693 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW 795 D S A + + KI L E LY L ++ I F K Q+ Sbjct: 694 DLT---RSGIADVIFESCPTKIFLPNPEAETENIRPLYEAVGLNARQIKILAFATPKRQY 750 Query: 796 FSSFLLQVENHSSWHRLFV-DPLSRAMYSSDGPDFEFVQQKRK 837 + + + L + P + +S D +++ R Sbjct: 751 Y----VMHPDGRRLFDLGLTGPELAFVGASGKTDIARIRELRD 789 >UniRef50_Q6MU50 Transfer complex protein TrsE n=2 Tax=Mycoplasma mycoides group RepID=Q6MU50_MYCMS Length = 814 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 112/680 (16%), Positives = 243/680 (35%), Gaps = 80/680 (11%) Query: 145 LPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA 204 L + + + Y VF ++ E+ + L + + ++ Sbjct: 118 LSSREDKEILTKKYYVFY---------YNKNLEELNLDTIFLHEHLLNTGLNCKQLEFYE 168 Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 + ++ ++I + + K+ + ++NYQ +E + L+ + L+ N Sbjct: 169 ILTVLKDIIEPSTNDFNEKQ-----FENINYQDIEIADVLE--PNKLSFTSDSYKTNKNI 221 Query: 265 RILNFHLARNPEIA-FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 + + R P W + +L+N + ++ + + D + N Sbjct: 222 ILNISVVDRYPLFPERFWAL-----DLVNTDSTV------IIKISQNDAKEFTRNLNRAI 270 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS-GQSSVVSYFLNITAFCKDNNETALE 382 ++E + + + + + E L + S + +NI + N+ + Sbjct: 271 ENIELQKRDIKKRNVVEISAKEVEINNLLNLVSLINDSKEIIKNVNIYLITRTNSFHLKK 330 Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + I +GF L + F + F + P + E +ES+ N Sbjct: 331 TLKLIEKDINIDGFSLNNLTFRQLDAFKSMFPRTDDELSENFRIETTTSTLSESYPFVNQ 390 Query: 443 MPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNT---NYNMAVCGTSGAGKTGLIQPL 499 + LL +L + F N+ N N + SG+GKT + Sbjct: 391 ALIQ-----NKGVLLGKNNLGELIIWNPFENLEQNSSFLNANTTIIAKSGSGKTASTLAI 445 Query: 500 IRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVR 555 ++ + D + Y LC G +++ G R NP + + ++ + Sbjct: 446 ADRLISQNKTKMMFIDPDNDYLKLCSKYNGKHINLGSGFESRINPLQILYHLKDETKKNK 505 Query: 556 DQLS-------------VMASPNGNLDEVHEGL---------LLQAVRASW--------- 584 L V+++ L+ + + +L+ +++ + Sbjct: 506 SHLKGESDVKLINSNEVVISNHIAFLEHFFDIINPNYEINRYILKMIKSLYTRWDFISKD 565 Query: 585 ---LAKENRARIDDVV-DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 L + I+D++ +F D ++ E + + L D++T G +N Sbjct: 566 LFNLKTTDWPTINDLINEFYDFKKDRKKEDEYVNEAMWNNALEFLKDEFTGFGKLSHLYN 625 Query: 641 SDEPSLRDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTPR--NLKKLNVID 696 D++++V ++ L + ++ A + L + +N + N + VID Sbjct: 626 GHSTLNTQDSEVIVFDIKTLIESNNFKIIQAQIMLLTAFTQNEFELNSKLSNKNTILVID 685 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E L+D +N EFI+K + R+ G ITQNI DF + + +RA N YK Sbjct: 686 EAHLLIDAQNPIALEFIKKTTKRVRKKRGGIWLITQNINDFSDPRILAQSRAILSNMQYK 745 Query: 757 IILKQSAKEFAKYNQLYPDQ 776 + L+ ++E K +L ++ Sbjct: 746 LFLQMDSEEIEKLAELLINE 765 >UniRef50_C5TJS3 VirB4 protein n=2 Tax=Proteobacteria RepID=C5TJS3_NEIFL Length = 838 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 121/697 (17%), Positives = 221/697 (31%), Gaps = 108/697 (15%) Query: 169 KKKSRADILEMENLVKIIRASLQGASITTQTVDA---------QAFIDIVGEMINHNPDS 219 K + I + L + A L+ + +++ G ++N + Sbjct: 164 KAEQEQAIGTLNELATNLEAVLK--DYHPYRLGMYEGKNGTVFSETLELFGYILNRINEP 221 Query: 220 LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAF 279 + + Y L+ DY+ G+N ILN L P+ Sbjct: 222 VPVLPAPVYNYLPLSRHLFSAKT-----GDYIV--RTPEGKNHYGAILN--LKEYPD--- 269 Query: 280 LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP 339 Y +LN + +++T + + + S+ Sbjct: 270 -----GTYPGILNGLKYLDVEYVITHSFSPMSRYDAMKTLERTRGMMISSGDKSF----- 319 Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI 399 + E +L SG + Y ++ + D+ E + GF Sbjct: 320 ---TQIAELDHAMDQLASGNFVLGGYHFSLAIYA-DSQEQLSQNIASARAELSNAGFVTT 375 Query: 400 SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA-------DNPLT 452 + LP + S N L PL NP Sbjct: 376 KEDLAVCAAYYAQLPGNWNY--------RTRIANLSSLNFLGLCPLHNFAVGKREGNPWG 427 Query: 453 PAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRSV--L 504 + T Q + + + N V G SG GKT LI L+ V Sbjct: 428 QCVTVLQTTNGQPYYFNFHATLEGEDSEGEKAIANTMVIGKSGTGKTALINFLLSQVQKY 487 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVM 561 D FD G + GG Y+ G+ FNPF + + V+ +M Sbjct: 488 DPKPTIFFFDKDRGAEIFVRACGGAYMALESGQPTGFNPFQ----CENTEANVQFLCGLM 543 Query: 562 ASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 G + +L+AVRA I + L N D YA Sbjct: 544 KQLGGKAHYSAAEDDDILRAVRAMLDTPPALRSISNFQKSLPNTGDDSLYAN-------- 595 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDD-AKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + ++T + G F++ + + A ++ + + + P + V+ LI + Sbjct: 596 ------IRKWTRGNSLGWVFDNPQDKIDFSGANIIGFDYTDVIENPQVRDPVIGYLIHRM 649 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 E + + + ++DE W++LD + + EF + +T R+ G I TQ+ D Sbjct: 650 EELI----DGRRFIYIMDEFWKILDGE-GGLKEFAKNKQKTIRKQNGMGIFATQSPEDAL 704 Query: 739 SDKASSAARAAWGNSSYKIILKQ---SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW 795 S+ A ++ I+L K++ +L +F + + D+ Sbjct: 705 KSDISA---ALIEQTATMILLPNPNADKKDYIDGLKLTDSEF---------QVVKSLDER 752 Query: 796 FSSFLLQVENHSSWHRLFV----DPLSRAMYSSDGPD 828 FL++ + S+ +L + D L+ S+D D Sbjct: 753 SRCFLVKQGHASAVCQLNLRGFDDELAVISASTDNID 789 >UniRef50_UPI00016C6849 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C6849 Length = 640 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 98/624 (15%), Positives = 197/624 (31%), Gaps = 99/624 (15%) Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 ++I+ N D + + LD + + S +V ADY+ +G + +F Sbjct: 12 AKIIDFNKDDILNETNLLDKGIPSLKELISPS-SFEVDADYIKIG--------KKYVRSF 62 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 + P A Y L+ + T+ + D E K E + Sbjct: 63 IMQGFP--------AQVYVGWLDSIFNYEGETDTTIHIDPTDDKIALEEYTRKITQFEAQ 114 Query: 330 SKTSYAKW----FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 + K + + +E R +L + + + D+ + + Q Sbjct: 115 LMSEQEKGNIRNITRLRDKIQELYMERSKLERNTDKLFQVQIACNLYS-DSLDELNKETQ 173 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 I N R ++ + T P+ GK + + + S + + P Sbjct: 174 KIDNKLRGRKMYMMPTYLRQDDTYKTVSPY--GKSYVED-----MFRNFNSGALTSCFPF 226 Query: 446 VADNPLTPAGLLAPTYRNQ--LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV 503 + G+ + ID + R N N+ V G G GKT + L Sbjct: 227 YNSDIRHEKGVFCGINLSTCSPILIDFYDRSK-LKNSNITVIGQPGTGKTFFVSLLTMRS 285 Query: 504 LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFAN----------------I 544 G V+ D Y L E +GG + NPF + Sbjct: 286 ALRGIRTVIIDPESEYGRLTEALGGSRIYLATDSKECINPFDIEEEDELDENFLPTGIKL 345 Query: 545 TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA------------------ 586 D+ + + ++VMA G L + Q ++ + + Sbjct: 346 VDVKGKIADLLNLIAVMA---GGLSGAQTSTVAQLLQELYESFGITKNPKSLYVTEPYFD 402 Query: 587 -----------KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTY 635 K+ D + L ++ E + +++ +L + G Y Sbjct: 403 KNTKEFIHEGRKKTMPIFSDFYNSLSEYAEKNSDIE-------VMDLVRVLKMFKKGGVY 455 Query: 636 GQYFNSDEPSLRD--DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 + ++ + ++ +V ++ LE+ L M+ + + + + + K Sbjct: 456 DLFDCYTSSNISNFKNSPIVTFDVSKLEEN-ILRPIGMYVALSWTWEKFGKKDPYINKRI 514 Query: 694 VIDEGWRLLDFK---NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAW 750 V DE W L+ + +F+E R R+ G + +Q +F S+ +A Sbjct: 515 VCDEAWMLVSKNMAGSEYSAKFLETASRRIRKRMGGLLVASQKFTEFVE---STQGQAVL 571 Query: 751 GNSSYKIILKQSAKEFAKYNQLYP 774 ++ KI L Q + ++ Sbjct: 572 TSAETKIFLGQDTTDIDSIQNMFK 595 >UniRef50_B4S9L3 CagE TrbE VirB component of type IV transporter system n=2 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9L3_PROA2 Length = 820 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 103/727 (14%), Positives = 217/727 (29%), Gaps = 108/727 (14%) Query: 159 RVFI--SYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN 216 R+F + + + ++ V+ I +QG + + +D + + I+ Sbjct: 138 RLFYDDPVTRSAAENNERELEAFVKTVQEITDIMQGVFVDVRELDDDETLTYLHSTISSR 197 Query: 217 PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPE 276 + + + L + + I ++ P Sbjct: 198 KHPVKAPDTPMYLDALLPDE---------------AFTNGDIPMLGDNFIPTVTISGFPS 242 Query: 277 IAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM--DLEKKS---- 330 + +L+ + + + D+ + E ++K+ Sbjct: 243 ES--------LPGMLDDLNHLEIDYRWVCRYICLDKDEARREIEKYRRQWWSKRKNLFTL 294 Query: 331 ------KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVE 384 K S A +A + Q LG S +T D +E A Sbjct: 295 LKEEATKESSALLDSDASNKAADADVALQELGEDLVSYGYITCTVTVTHPDLDE-ARRRM 353 Query: 385 QDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMP 444 + + + GF + N + LP + + + + N+A++MP Sbjct: 354 RRVRQVIQSRGFVVRDETLNSKEAWFGSLPGHVYANVRRPMVN--------TLNLAHMMP 405 Query: 445 LVADNPLTPAG-------------LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 L A A ++ T + +++ + V G +GAG Sbjct: 406 LSAIWAGEQANTHLGALTGCSLPHMMCSTTGSTPFRLNL----NVGDVGHTLVVGPTGAG 461 Query: 492 KTGLIQPL-IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL----DGETLRFNPFANITD 546 K+ L+ L ++ + V+FD ++ +GG Y + F P A+I D Sbjct: 462 KSTLLCMLELQWLKYPDSQVVIFDKDRSARAATMAVGGHYYEPGNEHAPFAFQPLAHIDD 521 Query: 547 IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 + L ++ + + A+ + + D +++ Sbjct: 522 QAERVWAAGFVLLLLREQGVKETPALKKEIDSALANLASQTADHRTMTVFTDLVQS---- 577 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPS 665 E+ L YT G YGQ F++D ++E+ L Sbjct: 578 -------------REVRDALRPYTIQGNYGQLFDADHEE-SLKGSWQMIEMNSLMGMHSE 623 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 L+ ++ L IE R L V+DE W L ++ +T R+ Sbjct: 624 ALIPALYYLFHRIEQRF----DGRPTLLVLDEAWLFLKHDVFMSQ--MQNWLKTLRKKNV 677 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDM 784 + TQ + D S KI L + Y + + Sbjct: 678 YVVFATQEVADAAE---SPIMATILSACHTKIYLPDEEALTPGMARAYHTFGLSETEIRL 734 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS-SDGPDFEFVQQKRKEGLSIH 843 + + +D ++ + +L + ++ + S D +F+ + +E Sbjct: 735 LSQAQKKRDYYY-----RSPKGRRMFQLEMGDIALSFAGMSSPDDHQFMDRLEREN---- 785 Query: 844 EAVWQLA 850 A+ + A Sbjct: 786 -AIGEYA 791 >UniRef50_C5ETG4 TRSE protein n=21 Tax=cellular organisms RepID=C5ETG4_9FIRM Length = 798 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 105/641 (16%), Positives = 211/641 (32%), Gaps = 74/641 (11%) Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQG----ASITTQTVDAQAFIDIVGEMINHN 216 F++ R D + + +Q + +DA + ++ Sbjct: 138 FLTVTVE-----RKDYEQAKAFFNTFEGGMQQEFHAIGSKLEPLDAAERLRVLYNFYRIG 192 Query: 217 PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPE 276 + + S +Y+ +K + + A + + P+ Sbjct: 193 DEETFSFDFDAYVKSKTDYKNDICGSMIKYSPNDFETDRKIC----RAVFIRRYPTSLPD 248 Query: 277 IAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAK 336 + + + + + + P LT + E+++ + +A Sbjct: 249 TF-INEITNVPVHSITSIDIVPVP--KDLTTRTLQKKYLGVESDILRQQRVRNKNNDFAS 305 Query: 337 WFPSVEK-EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG 395 +K E K L + ++ +N+ D E + + I K Sbjct: 306 DISYGKKVEKKTLEALMDDVRENDQNLFFAGVNMVLIA-DTREELNSITETIQTIGNKYL 364 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG 455 + T LP +++ ++ + ++A LMP P G Sbjct: 365 CNMEVHHLQQREALNTALPVG--------VRQVETMRTMLTRDIAALMPFNVQEIYEPTG 416 Query: 456 LLAPTYR--NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAVV 512 L T R L D TN N V G G+GK+ + ++ L +G +V Sbjct: 417 LCYGTNRISKNLCVAD----RKKLTNGNAMVFGVPGSGKSFFCKSEMLGVYLQTGDDIIV 472 Query: 513 FDMGDGYKSLCENMGGVYLDGETLR---FNPF---ANITDIDQSAERVRDQLSVMA---- 562 D Y + +N+GGV ++ NP N D+ S +RD+ M Sbjct: 473 IDPTLEYFDIAQNLGGVCINLSNYTQNYINPLWLDVNELDLADSKGLIRDKGEFMLGLCE 532 Query: 563 -SPNGNLDEVHEGLLLQAVRASWL-----AKENRARIDDVVDFLKNASDSEQYAESPTIR 616 + + L+ H+ ++ + +R +L ++ + D D L + E Sbjct: 533 QAMSEMLNSRHKSIIDRCIRKLYLDIAMSKEKYVPVMSDFYDLLMKQPEEE--------- 583 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 ++ + L+ + + FN + +L D + +V + L L M ++ Sbjct: 584 --ARDIALGLELFVSGSL--NIFN-HQTNLDVDNRFIVYGIRDLG--KELSAIAMLVMLE 636 Query: 677 YIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHK-----VGEFIEKGYRTARRHTGAYITI 730 + R+ R + IDE LL H G+F+ ++ R+ G I Sbjct: 637 NVRARIARNAEKGRATWLYIDECHVLLGTGEHSGRSEYSGKFLYSLWKKVRKQGGLCTAI 696 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 TQNI D + A NS + +LKQ+ + + ++ Sbjct: 697 TQNISDMLQNY---TAVTMLANSEFIALLKQANVDSQELSR 734 >UniRef50_Q9R2W4 Type IV secretion system protein virB4 n=30 Tax=root RepID=VIRB4_BARHE Length = 784 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 115/792 (14%), Positives = 244/792 (30%), Gaps = 87/792 (10%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPING--ANESIVEALDHMLRTKLPRGIPLCIH 99 +PY + + + +N + ++ +N A+ + +L + L T L + Sbjct: 12 DYIPYIRHINQHVIALNSRCLMTVMVVEGVNFDTADIDQLNSLHNQLNTLLKNIADERVA 71 Query: 100 LMSS-----QLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 L S + + ++ + E+ ++ Y + P Sbjct: 72 LYSHIIRRRETIYPESQFFSSFAATLDEKYKKKMVSQELYRNDLFVSLLWNPASDKTEQL 131 Query: 155 LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMIN 214 ++ + + I ++E L + + L+ +V A I + + Sbjct: 132 ASFFQRLAKAKKTQSEPDQEAIRKIEELSQDLIEGLESYGARLLSVYAHGGI-----LFS 186 Query: 215 HNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR--ENGRNSTARILN-FHL 271 + L+ L + + + +D + G E S R F Sbjct: 187 EQSEFLHQLVGGRRERIPLTFGTIAS----TIYSDRVIFGKETIEIRHESNERFAGMFGW 242 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 P + + L+ FILT + V + + K + + Sbjct: 243 KEYPSKTRP--------GMTDGLLTAPFEFILTQSFVFKSKAAASVIMGRKQNQMINAAD 294 Query: 332 TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 + + + E L S + + + L++ F ++ + E Sbjct: 295 RA--------SSQIEALDEALDDLESNRFVLGEHHLSLAVFA-NHPKALAEYLSKARAHL 345 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA---- 447 G + + LP S N A L P + Sbjct: 346 TNGGAVIAREDLGLEAAWWAQLPGNFSYRARSG--------AITSRNFAALSPFHSFPIG 397 Query: 448 ---DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 N A L T + + + + N VCG SG+GKT ++ L+ + Sbjct: 398 KLEGNVWGTAVALLKTQAGSPYYFNFHYGDLG----NTFVCGPSGSGKTVIVNFLLAQLQ 453 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVM 561 V FD G + GG Y +G+ P + +++ +R+ + + Sbjct: 454 KHNPTMVFFDKDQGAEIFVRAGGGKYKPLKNGQPTGIAPLKGMEYTEKNKVFLRNWVLKL 513 Query: 562 ASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 + G + E + +A+ A + + + F N S + Sbjct: 514 VTAEGQTVTEEERQDIAKAIDALGNLPHAQRSLSALQLFFDNTSK--------------E 559 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIEN 680 + + L ++ G F++D+ L D++ + ++ D + +M L I + Sbjct: 560 GIAIRLQRWLKGNDLGWVFDNDQDDLNLDSQFIGYDMTDFLDNEEIRRPLMMYLFNRILD 619 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 + + + VIDE W+ L+ + K F + +T R+ G + TQ+ D + Sbjct: 620 LI----DGRRIIIVIDEFWKALEDDSFKA--FAQDRLKTIRKQNGMMLFATQSPKDALN- 672 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 S+ A +I + Y + + L + + FL Sbjct: 673 --STIAHTIIEQCPTQIFFPNQKANYKDYVEDFK-----LTEREFELIQSELSRESRRFL 725 Query: 801 LQVENHSSWHRL 812 ++ S L Sbjct: 726 IKQGQSSVVAEL 737 >UniRef50_Q84BZ8 Putative membrane-bound ATPase n=2 Tax=Spiroplasma RepID=Q84BZ8_SPIKU Length = 888 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 119/656 (18%), Positives = 231/656 (35%), Gaps = 76/656 (11%) Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV 209 T + + +F+ I ++E + II+ L ++ T +D ++ + Sbjct: 226 GYSFTSKVFVLFV---------YDTSISKLERDIHIIKMKLTETNLRTIDLDKYELVNTI 276 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 + N D + + + ++N D+ G R N + + + Sbjct: 277 KLIFNPF-DEKFSNEKIDEYQDNVNELLALDNITFT------KSGFRINDAQFSIKGIQ- 328 Query: 270 HLARNPEIAFLWNM----ADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 + P+ + + + N+ N L V E + A Y Sbjct: 329 NYPIYPQDGWAAKLCTTDSTVIFNISNTNLD----------AVKEQLHRAMINARTNYFS 378 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 ++K S E+E + + L Q + SG+ + + + + + + E+ Sbjct: 379 VKKTVNRS------EKEREYESFENLVQLITSGEEQIKRVNIIFLNYGFNRH-MLKQSEE 431 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 + + ++ F + + LP + E + N P Sbjct: 432 RLYILLKSLNMKMDYLFFRQISGYSALLPKPTDPMAYHNSYE------MPCATLGNSFPF 485 Query: 446 VADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 + + GL + F D F RG + N N GT+G GKT + + + Sbjct: 486 LNNALEDEKGLFVGYNTTGDVIFTDQFKRGGDFQNSNALFIGTTGGGKTTTVSKFLNYHI 545 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAE---RVRDQL 558 +G ++ D + LC G ++D G FNP IDQ + D L Sbjct: 546 INGRKVIIIDPKREFGKLCNYHDGNWIDVGSGHKGNFNPLQINAKIDQYQNINTIIGDHL 605 Query: 559 SVMAS----PNGNLDEVHEGLLLQAVRASWLAKE-------------NRARIDDVVDFLK 601 ++ + + NL G L Q + +L + DD+++FL Sbjct: 606 QILETFFHFTHPNLKMDEVGFLTQRILDLYLKLGINNEEKFNKMENNDWPIFDDLLNFLT 665 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 AE +++ + +T G Y +N DD + +L++ L Sbjct: 666 KLEPDLGEAEMLHKITKIIQ-----YDFTGYGKYAALWNKHSTITLDDNLLNILDIQTLY 720 Query: 662 DRPSLLVAVMFSLIIYIENRM--YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 + +L A MF ++ YI + R + + + +DE ++D N + +F+ + + Sbjct: 721 SKQKVLKAQMFLMLNYIRTEINNNRFNTDNEIILAVDEAHIVIDKDNPQALKFLFETVKM 780 Query: 720 ARRHTGAYITITQNIVDF-DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 R G I +TQN+ DF + + A A N+ Y ILK K+ ++LY Sbjct: 781 IRGFNGGVILVTQNLTDFRMTAELEREASAILNNAQYVGILKLKQKDLHDVSELYS 836 >UniRef50_A4X0Q7 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X0Q7_RHOS5 Length = 785 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 92/523 (17%), Positives = 171/523 (32%), Gaps = 57/523 (10%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 N+ + L+ F+LT + + + LK + P++ +A + Sbjct: 253 NMFDDLLTAPFSFVLTQSFRCVAKNMALRQMALKEGRMRNAGD-------PALS-QADQL 304 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 R L SG+ + + L + C + D N +G + Sbjct: 305 IAARDELMSGKFVMGEHNLTLLVLC-ETPAELKNRVADARNLLADSGAVVAREDMGLESQ 363 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL-------LAPTY 461 F + LP V S N + PL G T Sbjct: 364 FWSQLPGNHA--------FRARVALMTSRNFTAMAPLHNYPTGHRHGNEWGDAICKLQTS 415 Query: 462 RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 + + + +T + G SG+GKT L L+ + G ++FD G + Sbjct: 416 AGSPFYFNFHVGDLGHT----FIAGPSGSGKTVLQTFLLSQLEKFGAKRILFDKDRGAEI 471 Query: 522 LCENMGGVYLDGET---LRFNPFANIT-DIDQSAERVRDQLSVMASPNGNLDEVHEGLLL 577 GG YLD PF + D A V S++ + + Sbjct: 472 FVRASGGSYLDFRNGVATGCAPFMALDMTPDTQAFMVELVKSMLGGDRAGFSADDQHRIE 531 Query: 578 QAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQ 637 AV+ + + + D L +E ++ LD++T +G G Sbjct: 532 AAVQHLGALPVEQRTVRALCDLLGFGGGAE-------------DIGSRLDRWTKSGRLGW 578 Query: 638 YFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE 697 F++ + +A +V ++ D + +M L+ IE + + IDE Sbjct: 579 VFDNAADEIDFNADLVGFDITEFLDDAEIRNPIMMYLMRRIEQLI----DGRRIAIFIDE 634 Query: 698 GWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKI 757 W+ L + +FI+ + R+ G + TQ+ D AS AR + +I Sbjct: 635 FWKAL--TDPYFSDFIKNKLKVIRKQNGIIVAGTQSASDVI---ASPIARTIIEQCASQI 689 Query: 758 IL---KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 + SA + ++ L ++ ++ ++ K S Sbjct: 690 WFGSDRASASDLVEHFGLSHREYEIVREELPRGHFLVKQGGNS 732 >UniRef50_C3WX74 Conjugal transfer protein TrbE n=3 Tax=Fusobacterium RepID=C3WX74_9FUSO Length = 798 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 92/619 (14%), Positives = 200/619 (32%), Gaps = 87/619 (14%) Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 I + P + ++ P+ ++ +++ S+ KY Sbjct: 231 KEIRCISIQGFPNY--------TVPGFFDVLNRLNIPYRWITRFLMLSKLEALSKMEKKY 282 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKE------------WGELRQRLGSGQSSVVS--YFLNI 369 ++ + + + + + + E +E E+R ++ VS ++ Sbjct: 283 KNIFSQRLSLFQRVYAELTGEKEENSRKLNEDALNKANEVRTQIALTAGDYVSQGFYTCT 342 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 D+ + E I + GF I N + FL +P + Sbjct: 343 LIVDGDSIDEVEERVDVISKTINNMGFITIEESINSVEAFLGSIPGNITNNI-------- 394 Query: 430 VVQRAESFNVANLMPLVADNPLT--------PAGLLAPTYRNQLAFIDIFFRGMNNTNYN 481 + + +++L+P+ + P + T + +I + + Sbjct: 395 RMPILNTITLSHLLPVSSVWGGDSWNKHLNAPPLIYTKTKGSTPFRFNIHIEDIG----H 450 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD--GETLRF 538 A+ G +G GK+ L+ + S + FD + L +GG + D + L F Sbjct: 451 SAIVGPTGYGKSVLLGLIASSFMKYKDSRVYFFDKDASSRVLTYAVGGEFHDLGNDELSF 510 Query: 539 NPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD 598 P ANI +++ L ++ N + + + +A+ I + Sbjct: 511 QPLANIEIVEEKEWAYGWILEILEQENVKVSPTQKEKIWKALDNLAKTPIELRTISNFYT 570 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 + + E+ L Y G G+YF+SD+ +L ++ V E+ Sbjct: 571 SVND-----------------REIKEALIPYKIGGALGKYFDSDKDTLNF-SRWQVFEMN 612 Query: 659 GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR 718 + + + L+ YI R+ + + ++DE W F N I + + Sbjct: 613 QVINNKKGITP----LLSYIFRRIENSLDGSPCIIILDECWMF--FDNPIFAAKIREWLK 666 Query: 719 TARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL 778 R+ + I TQ + D + K + K+ L Y +Y L Sbjct: 667 VLRKKNCSVIFATQELGDILNSKLFTT---VLDACQTKVFLPNPNAFADNYIPIYQKFGL 723 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSS-------DGPDFEF 831 I K +++ + S L + + ++ +S + + Sbjct: 724 NKTEIEIISKATKKKEYY----YKSTKGSRLFELDLKEKTLSLIASSDLAKQNKAKELKE 779 Query: 832 V----QQKRKEGLSIHEAV 846 + +E LS E++ Sbjct: 780 IYRNANDFTREWLSYGESI 798 >UniRef50_A8S5W5 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8S5W5_9CLOT Length = 903 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 119/748 (15%), Positives = 235/748 (31%), Gaps = 111/748 (14%) Query: 132 RAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQ 191 R ++ +Q L HY VF D + + + +L Sbjct: 199 RIGIIQDRMSQLELFNNKETVYLPFHYMVFF----------GRDRGRLTEQAQNMVDTLG 248 Query: 192 GASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 I + + Q + +N ++ +R + D + + D L Sbjct: 249 PHGIECRILKEQELAIFLK----YNYSGVFDEREAW--------KLTPDQYMDWILPDKL 296 Query: 252 TLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 + R N + P + + + + + L + +TL + D Sbjct: 297 AVTSRTVA-YDGLVTHNLRVTDYPIV-----VPNAWGHALFNRPDVR----VTLKMRPID 346 Query: 312 QVKTHSEANLKYMDL-EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 + K + + +L E+ + T + E+ L ++ + IT Sbjct: 347 RYKGIKQIDRAIDELREQGASTGKTSRLMELGSHIDTLAEVLSLLQGDNEILMDVNIFIT 406 Query: 371 AFCKDNNETALE-----------VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 A+ + + L +++ I + GF+ + + Sbjct: 407 AYDYEASPELLGPGYRPPGQGIGMKRQIRRELSEWGFKSSDMFMRQFDAYAS-----GHI 461 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN 479 F + G + S A P V + G+ + F+D F R N Sbjct: 462 SAFDAFSKDGRGIHSGSVAAA--FPYVYKVMMEKKGICLGKSAGRPVFLDFFARNKERVN 519 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETL 536 NM V G SG+GK+ + ++ ++ + D + Y L ++ G +D Sbjct: 520 SNMVVIGKSGSGKSYATKSILANLAAENSKIFILDPENEYLGLARSLKGKIIDVGSATEG 579 Query: 537 RFNPFANITDIDQSAERVRDQLSVMASPNGN---------LDEVHEGLL----------L 577 R NPF IT + + + P L+E + +L L Sbjct: 580 RLNPFHIITGLSDEEDELDGDEEENQIPGAKVSFNMHMQFLEEFYRQILPGIEADALEYL 639 Query: 578 QAVRASW--------------LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 + L + DD+ + + N Q + + L ++ Sbjct: 640 NNITIRMYEAKGIDAETDLSGLTPGDYPTFDDLYEKILN---DFQMSTGDYSKKNLTVLL 696 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS--LLVAVMFSLIIYIENR 681 + ++ G +N E S+ +V L + + A M ++ +++N Sbjct: 697 NYISKFATGGRNAGLWNG-EASISTQENFIVFNFQSLLANKNNTVANAQMLLVLKWLDNE 755 Query: 682 MYRTPR-------NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 + + + K + VIDE +D K +F+ + + R++ G I ITQNI Sbjct: 756 IIKNRDYNLRYGASRKIIIVIDEAHVFIDSKYPVALDFMYQMAKRIRKYNGMQIIITQNI 815 Query: 735 VDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD--QFLPLQRDMI------ 785 DF +++ + + A Y I S + +LY ++D I Sbjct: 816 KDFVGTEELARKSTAVINACQYSFIFPLSPNDMHDLCRLYEKAGAINESEQDEIINNGRG 875 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLF 813 F SS ++ RLF Sbjct: 876 RAFVVTSPSERSSIDIETPKD--IERLF 901 >UniRef50_Q07GT1 VirB4 protein, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GT1_ROSDO Length = 786 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 118/777 (15%), Positives = 251/777 (32%), Gaps = 77/777 (9%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKL 90 + R LPY + + + D + F++E I + A+E+ V+ L + Sbjct: 17 EDQGEHLLVRHLPYVGAVTDDVMMLRDGDLIASFIVEGIAADTASEADVDDLSLAFSRTV 76 Query: 91 PR---GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE 147 + + + +H SS +V ++ + + F A + T Sbjct: 77 TQAQSDVGIYVHRFSS-VVSPKL-------TGVAPEVSTFAAAVDQRWQSHIETSGLRSR 128 Query: 148 GMNLPLTLRHYRV------FISYCSPSKKKSR-ADILEMENLVKIIRASLQGASITTQTV 200 + +TLR +V F+S +++ +R D+ + +V +++ AS T ++ Sbjct: 129 QAMITVTLRPSKVKSLWAKFVSGGVAAQRGTREKDVSRLNEIVDHFMEAVRVASPTRLSI 188 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGR 260 + +I ++ + N P P +D + L R D ++ Sbjct: 189 SSGEWIGLLRAI-NTGQFFTSPPGAGFMPLAD----MIAVGR-LDFRNDTFVSFGSDSKD 242 Query: 261 NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEAN 320 + F + P ++ + N PF + ++ SE Sbjct: 243 TRYGAV--FSIKSYPS--------NSAPGIFN---RFDLPFDMVISQSYTPVNPVESEER 289 Query: 321 LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 + + ++ A+ +++ + + + SG+ + + IT F Sbjct: 290 ISRTARQMQAADDAAQ---TLKDQLVD---ALDDVASGRIGMGMHHATITVFAG-TVAEL 342 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 E I + ++ G ++ F P + + + + Sbjct: 343 DEAAASIRGAGQRAGATVVREDVGARAAFFAQHPGNYAYRARAAMISSTNFADFTALHAT 402 Query: 441 NLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRG--MNNTNYNMAVCGTSGAGKTGLIQP 498 A P + + P R + + G T + V G +GAGKT Sbjct: 403 PAGHSRAQTPWGESVTILPDIRGEPYRFNFHLAGELQERTVGHTLVIGMTGAGKTLGACF 462 Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVR 555 L+ + FD G + +G Y GE FNPFA D ++ + Sbjct: 463 LLAQAARLNPRIIAFDKDQGMEMPLRALGADYAKVRMGEPTGFNPFAAEAD-ERGTAWLT 521 Query: 556 DQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTI 615 L + G L L A R++ + + L++ D Sbjct: 522 SWLEATLAAQGTLSATQREALSNATRSNMETDPSLRTMRQFRSQLRSVDDG--------- 572 Query: 616 RSRLDEMIVLLDQYTANGTYGQYF--NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 ++ L + +G YG F + +L + + +L + + + A + Sbjct: 573 ----GDLHTRLGLW-DDGQYGWLFSGEGQDETLSFNNDVTAFDLTEIFETQEVRTAWLAY 627 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 + IE ++ + +IDE W++LD + ++ T R+ + +TQ Sbjct: 628 VFRRIERQI---EDERPTIILIDEAWKVLD--DPFFEAMLKDWALTLRKKNVVLMLMTQR 682 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL-YPDQFLPLQRDMIGKFG 789 + + S+A + + ++ S + L + D G Sbjct: 683 VDHLVN---SAAGGSILESCVTTLVYPNSRYTLDEVAPLNFTDAEAAFVTSSAGGQR 736 >UniRef50_B5EKP3 CagE TrbE VirB component of type IV transporter system n=3 Tax=Acidithiobacillus RepID=B5EKP3_ACIF5 Length = 840 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 123/746 (16%), Positives = 240/746 (32%), Gaps = 109/746 (14%) Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQT--VDAQAFIDIVGEMINHNPDSLYP 222 P + A + ++I L + +DA A + + E + + Sbjct: 157 KQPGQLADAAFRDTLARYRQVIEVILGIFRHGYRVKAMDADALLTHIHECLTGATHRVNA 216 Query: 223 KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 R + + + + + + + + +L + PE Sbjct: 217 PRIPAYLDALIGHHDFVGGLEPSMDGEEIRV----------VTVLGYPSMTFPE------ 260 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS------------EANLKYMDLEKKS 330 +L S+ P TL + D + AN+K + EK + Sbjct: 261 -------MLENLHSLPIPLRYTLRFLPLDPPDAVADMAKIRDRWFGSRANMKSLLTEKMT 313 Query: 331 KTSYAKWFPS--VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + + V A + + G ++ L++ D + + + I Sbjct: 314 GEAQGQLSADDTVVNLAYDAKQAVNEAREGAVKFGNFTLSVVLRSADE-KVLADRIKAIK 372 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-- 446 G+ N + FL LP + + + L S NVA+ P Sbjct: 373 TFLDNAGYVAHLETTNTVEAFLGSLPGHLYENIRRPL--------MHSLNVADFAPKTEI 424 Query: 447 --------------ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 +D P L A T N +++ + + + G +G GK Sbjct: 425 WAGEARCPSPLMNLSDGRKAPPLLYAATTGNTPFRLNLHVGDLG----HSLIAGMTGGGK 480 Query: 493 TGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLRFNPFANITDI 547 + L+ L + FD G +L E MGG + D L F P ++ D Sbjct: 481 STLLALLAAQWQRYPDSRVIAFDKGMSLYALTEAMGGQHYDLNGPTSDLFFAPLQHVDDP 540 Query: 548 DQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 + A D + +A+ G + + AV LA+E+ + ++ ++N Sbjct: 541 AE-AAFAADWVEALATLQGMTITSTERSAIRDAVHG--LARESGRSLTALLQMIQNRGIK 597 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDRPS 665 + L YT G G+ +++ L DA M+ E+ L + Sbjct: 598 DA-----------------LQYYTLTGQTGKLLDAESDGLSMADASMITFEMSHLMNGGP 640 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 V +++Y+ +R+ + L ++DE W LD N + + + R+ Sbjct: 641 AEHRVTVPVLLYLFHRIEQMLDGRPTLILLDEAWTFLD--NELFLAKLRQWLKELRKKNA 698 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 A + TQ++ D + + + KI L A LY D L ++ + Sbjct: 699 AVVFATQSLNDLKNSSLLPVLK---ESCPTKIFLPNRAATSPDLKPLYIDMGLNDRQIEL 755 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRKEGLSIHE 844 K ++ L + + P++ A SD + + V + + + Sbjct: 756 VVASTPKQDYY----LSTPEGQRRIQFGMGPVTLAFCGVSDPREVKRVAELKTQHGDR-- 809 Query: 845 AVWQLAWKKSGPEMASLEAWLEEHEK 870 W +AW K + + W+ E Sbjct: 810 --WPIAWLKERLSPSIRDGWVSYAES 833 >UniRef50_C7WD64 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis JH1 RepID=C7WD64_ENTFA Length = 816 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 115/666 (17%), Positives = 222/666 (33%), Gaps = 82/666 (12%) Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL 220 +I++ +K +A I + L + + + + +V +++ N Sbjct: 162 YITFNQRAKTLEQA-IPALNRLQGDLEDQFSEMGCEVEELSGIERLRVVNDILRPNKKLH 220 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFL 280 + L + DSFD K R D +G + ++ +L P L Sbjct: 221 FEYEDLLFSGLTTHSAIAPDSFDFKYRKDRFKMG------DYYGQV--LYLRNYPAE--L 270 Query: 281 WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK--------SKT 332 ++ L+ I +TL + DQ K K +E++ +++ Sbjct: 271 SDI------LITNITDIPTNLQITLHIEPLDQQKGLDLVKTKLSFMEQQKIDEQKKAARS 324 Query: 333 SYAK-WFP-SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 +Y P + + E EL ++ + S+ + A KD + + + IL + Sbjct: 325 NYDPNLIPMELRRSMDEAQELLDQMQGDNEKLFSFTFLVMAVDKDERK-LDDTIEQILTA 383 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 RKN E + + L + + + + A +P A Sbjct: 384 GRKNDCEFAKLNYLQEEGLNSTL--------LWGNNFVPIHRTLTTASTAVFIPFTAQEL 435 Query: 451 LTPAGLLAP--TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL--DS 506 + P G + L +D N + GT G+GK+ + + +VL D Sbjct: 436 MQPNGKYYGLNSVTKNLVTLD----RRKLKAPNGFILGTPGSGKSFATKKEMTAVLLSDP 491 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVR-------D 556 +V D Y L E + G + G NP D + V Sbjct: 492 DAEVIVIDPEREYTPLAEALNGEVIQISAGSKNHVNPMEINNDYADDDDPVILKTDFVLS 551 Query: 557 QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR----ARIDDVVDFLKNASDSEQYAES 612 ++ N L + L+ ++ R ++ + D + LK+ + E Sbjct: 552 LCEMLIGGNIGLSPTQKTLIDRSCRFAYKKYFENGSGMPTLKDFSNILKDQPEDE----- 606 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 ++ V L+ YT G+ + S + ++ + +V ++ L L M Sbjct: 607 ------ARQLAVELELYT-EGSLSVF--SHQTNVDTSKRFIVFDVKDLG--KQLRSMGML 655 Query: 673 SLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 ++ I NR+ + IDE L F N + + + AR+ IT Sbjct: 656 IILDQIWNRITSNRNAGRRTWVYIDEIQLL--FSNEYAENYFFELWSRARKWGAIPTGIT 713 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 QN+ S S A NS + ++L QS ++ + +L Q+ I Sbjct: 714 QNVSTLLS---SLNAERMLSNSDFVLMLNQSQRDRERLGELL--HISSRQKKYITNAKEG 768 Query: 792 KDQWFS 797 ++ Sbjct: 769 AGLMYA 774 >UniRef50_C3WQT8 Conjugal transfer protein trbe n=2 Tax=Fusobacterium RepID=C3WQT8_9FUSO Length = 823 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 115/638 (18%), Positives = 231/638 (36%), Gaps = 74/638 (11%) Query: 176 ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINH-NPDSLYPKRRQLDPYSDLN 234 +++ V +I+ S ++ Q + + + + ++ P R + S ++ Sbjct: 174 KEQVKEYVNLIKNEFSEIS----ELNDQETLTYLHSTFSQYDKQTIVPLRSDILLDSYIS 229 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPE 294 + D F KV +Y+ IL F P M + S E Sbjct: 230 DTPIVDGFRPKVGDNYI----------GAISILAFAGESFP------GMFNEISKA-GVE 272 Query: 295 LSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWG----- 349 + FI ED +K S+ ++ + ++K+ TS + E ++ Sbjct: 273 CRWTSRFIF---YDKEDSIKISSKVKGRWGNRKRKTFTSLEEKALKKPLEDDDYEAIMAE 329 Query: 350 -ELRQRLGSGQSSVVSYF-LNITAFCKDNNETALEVEQDILNSF-RKNGFELISPRFNHM 406 E++ L Q+ ++S TA ++ N+ LE + DI+ S ++ GF + N + Sbjct: 330 EEMKDILSMLQNDLISLGKFTFTAIVRNKNKEQLEKDLDIVMSIVQQRGFTAVKENVNTL 389 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL----LAPTYR 462 + F +P + K S +L P+ + A Y Sbjct: 390 QAFFGSIPGDFRHNVRK--------VPLPSMTAIDLFPINSMWCGERENKHFNAPALFYA 441 Query: 463 NQLAFID-IFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMGDGYK 520 N + ++F +MA+ G +GAGK+ L+ + S + +FD G + Sbjct: 442 NSGTGYNSVYFNTHVRDVGHMAMYGRTGAGKSTLLCFIAASFKKYADSQVFIFDKGGSTR 501 Query: 521 SLCENMGGVYLD--GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQ 578 L GG + D + L F P A I D + + N L + + + Sbjct: 502 VLTAATGGKFYDLGRDNLSFQPLAKIDDRLERNWAYEWLCEIYEQENVILTPELKDAISE 561 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 A+ + EN+ I L+N + + + YT +G +G Y Sbjct: 562 ALNSLIDVPENQRTITKFQILLQNNT-----------------LRSAIRPYTTDGPFGNY 604 Query: 639 FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 F+ + + V E+G + + + ++ + +E M ++DE Sbjct: 605 FDGTKDFFNSEYSWQVFEMGKVLESKVVAPPLLKYIFHKLETIMLTE--GKPTQIILDEC 662 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W++L+ N + + +T R+ + I TQ I D + +++ + I Sbjct: 663 WKVLEDPN--FVKKFKDWLKTMRKLNVSVIFATQEITDILESSIKNTLKSSV---ATTIY 717 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQR-DMIGKFGAAKDQW 795 L + ++LY L L++ ++I + +D + Sbjct: 718 LANKKAQTTFDSELYKSLGLNLKQIELISRLRMQRDYY 755 >UniRef50_A2UVZ8 Putative plasmid-related protein n=1 Tax=Shewanella putrefaciens 200 RepID=A2UVZ8_SHEPU Length = 938 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 152/951 (15%), Positives = 300/951 (31%), Gaps = 162/951 (17%) Query: 8 VTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGF--- 64 ++ A+ SL+ + S K E L + P F LLPY Y+ +G F+ + GF Sbjct: 2 ISNAIRSLLG--QKQPLSKKDVEKLYKRDLPSFPDLLPYTGYDSATGTFILED--GFSRA 57 Query: 65 -MLEAIPIN----------GANESIVEALDHMLRTKLP---RGIPLCIHLMSSQLV---G 107 + P+ G E + E ++ T+LP + + Sbjct: 58 KVFTVNPLPTEGRSPKTLVGYREKMKEFIEQTF-TELPLNGGQWVIQQFSFDDPRIHDLA 116 Query: 108 DRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL-----RHYRVFI 162 D+IE + + + R + + + + R ++ I Sbjct: 117 DQIEDYAAPHAKGTVYTTAYAEMMRTHLKGISRKAEGIFVDNEVTRAAWRGCYRRTKLVI 176 Query: 163 ---SYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDS 219 S K E+ + + +L + + F + N PDS Sbjct: 177 YRRCTNSDMKDAEFCPAAEVNEICEQAVKTLTSGGYVLKEDTPKEFFGWLIRFFNPQPDS 236 Query: 220 LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS---------TARILNFH 270 P+ Y + + + +K +G N R + Sbjct: 237 DDPE-HYYKTYESILAREADGELPIKGALTEALIGTPPRSDNKNNCWFLDEIPTRFIRIA 295 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISC-------PFILTLTLVVEDQVKTHSEANLKY 323 RNP + + + + I C + T ++ Q ++ L Sbjct: 296 GCRNP--PRIGQLTGEVVDGVGENQRIECTLDKVPPNSMFASTTIICPQ----TDFELLL 349 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV 383 + + ++ +E ++ G S+V F I N + Sbjct: 350 KRQADNAVGDSL----ATARKQEELQQVAAEFGR-SDSIVRNFSGIYV-SGKNLTELRKN 403 Query: 384 EQDILNSFRKNGFELISPRFNH--MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN--V 439 Q ++ G I + + ++ F+ +P + + K G + + ++ V Sbjct: 404 SQQVVTVLSNAGMRPIKEKADSFGLKAFMLSMPMVFNPAMDK-----GNIYQKPTWAQHV 458 Query: 440 ANLMPLVADNPLTPA-GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 ANL + + G +D + +N V G G+GK+ Sbjct: 459 ANLSFAYGRSEGSGNVGFSFYNRGGSPLSVDPLSKADKTSNSFGLVLGAPGSGKSATANA 518 Query: 499 LIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG-----ETLRFNP--------FAN- 543 L+ ++ A + D G+ + + G +++ E L ++P F + Sbjct: 519 LLAQIMAVHRPKAFIIDPGNSF-----GLIGDWMERHDLTVEKLSYSPSSKSTLAVFKDA 573 Query: 544 ---------ITDIDQSAERVRDQLSVMASPNGNLDEV----------------------- 571 I +Q+A V D ++ + S G++D++ Sbjct: 574 AKLLVDDMAIEQAEQNASNVGD-IAELISSEGDIDKLSEPDDDADRDVLGELEIIALIMI 632 Query: 572 --------------HEGLLLQAVRASWLAKENRARID---DVVDFLKNASDSEQYAESPT 614 LL +++ + + I VV+ L +A+ E Sbjct: 633 TGGEKREYEQYMRADRQLLRKSIIEAAKDAREQGTITRPSHVVERLASAARGEWGGFDEK 692 Query: 615 IRSRLDEMIVLLDQYTANGTYGQ-YFNSDEPSLRDDAKMVVLELGGL--EDRPSLLVAVM 671 RS M + + +GT+ FNS + DA +V+L++G + + + Sbjct: 693 RRSAASSMAGGMATWCESGTFENAVFNSADGDGIPDADVVILDVGHFSRSGYEAQMATCL 752 Query: 672 FSLIIYIENRMYRTPRNLKKLNV-IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 L+ YI N + + + + + IDE L N + FI K + R+ I Sbjct: 753 TGLLQYINNLAEKEQHSGRSILLFIDEAH--LVTVNPLLAPFIIKMVKMFRKIGVNPWFI 810 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIIL---KQSAKEFAKYNQLYPDQFLPLQRDMIGK 787 TQNI DF + A + I++ Q + AKY L +Q MI Sbjct: 811 TQNITDF-----PAEAEKLLTMIEWYIVMLASPQEVELIAKYKSLTEEQVN-----MITT 860 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 D ++ ++ + R + +D + + +E Sbjct: 861 CKKE-DLKYTEGVILGKKMQEIFRAVPPSTILTLSQTDKEEKTKRAKTMRE 910 >UniRef50_C6XES2 CagE TrbE VirB component of type IV transporter system n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XES2_METSD Length = 824 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 98/682 (14%), Positives = 227/682 (33%), Gaps = 61/682 (8%) Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 + K + I + + + + ++L + I +I+H + ++ + Sbjct: 148 STNGKTLAAKTIAKFQAAMADVESALSSVFLGVTR-----LKCIEHRVISHGIEDVWVED 202 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 R + S L+Y S +++ + + + ++ I+ ++ ++ + Sbjct: 203 RLM---SYLHYAVTGISQKIRLPSIPMYIDTIIGSQDFVGGIIPKIGKKHIQVVNIEGFP 259 Query: 285 -DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 ++Y +L+ + + + + D + N +K+ T + + + Sbjct: 260 AESYPGMLDHLNRLPITYRFSTRFIFLDPEEAKGILNKLRKKWRQKA-TPLSDQIFNTKT 318 Query: 344 EAKEWGELRQRLGSGQSSVVS----------YFLNITAFCKDNNETALEVEQDILNSFRK 393 A + + ++ S +S ++ ++ +++ E ++ S R Sbjct: 319 GAVDLDAI--QMEKDAESAMSEAGALTVRFGHYTSVVVLMEESLEKLKATTTTVVKSIRD 376 Query: 394 NGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP 453 GF N + + LP + K + + + P P Sbjct: 377 MGFSARVEDINAIEAYFGSLPGEGVANVRKPILHSLNLSHLLPTTSFWAGPERNPCPFYG 436 Query: 454 AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVV 512 Y + + G +G+GK+ L+ ++ Sbjct: 437 NDTAPLLYGRGAGATPFRLTLHVGDVGHTLILGPTGSGKSTLLNLIVAQQRRYNRAKIFA 496 Query: 513 FDMGDGYKSLCENMGGVYL----DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNL 568 FD G MGG++ D +L F P A++ + A + + ++ S NG + Sbjct: 497 FDKGMSAYIPTMAMGGMHYEVGGDNSSLAFCPLAHVDQAHERAWA-EEWIEILLSLNGIV 555 Query: 569 -DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 H ++ AV + A + + L++ +E+ L Sbjct: 556 VGPRHRSIIHDAVMSLGNADPDLRTLTHFQAQLQD-----------------EELRDALS 598 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL-LVAVMFSLIIYIENRMYRTP 686 Y +G+ ++++ +L + V E+ L + L+ V+ L IE ++ Sbjct: 599 PYVGSGSAAHLLDAEKDTLDLGN-LQVFEMEHLMNMGEKNLIPVLMYLFHKIEGQL---- 653 Query: 687 RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA 746 L V+DE W +L E I + + R+ A + TQ+I D + S+ A Sbjct: 654 DGSPTLIVLDEAWLMLSH--PLFMEKIREWLKVLRKANAAVVFATQSIEDIVN---SAIA 708 Query: 747 RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENH 806 + + KI+L + Y L ++ + G K ++ Sbjct: 709 PVVFQSCPTKILLPNPEARNEISAKAYKQIGLNERQLELITMGTPKRDYY----YLSSVG 764 Query: 807 SSWHRLFVDPLSRAMYSSDGPD 828 L + P++ A G + Sbjct: 765 RRLFSLELGPVALAFVGKSGKE 786 >UniRef50_D0L172 CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L172_HALNC Length = 819 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 98/634 (15%), Positives = 204/634 (32%), Gaps = 77/634 (12%) Query: 229 PYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYS 288 + V D + L G+ + ++ L P+ ++ + Sbjct: 214 EDRPVRLPSVPMYLDALIGNQPLLTGVEPQVGDKHIAVIA--LDGYPQESWPGMLGAL-- 269 Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE------ 342 LSI+ + + D + + N ++K + + F + Sbjct: 270 ----DTLSIT--YRWNTRFIFLDGHEAKAIMNKHRKKWQQKQRGLKDQIFKTSSGAVDLD 323 Query: 343 --KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS 400 ++ + + SG + NI D+ E Q + + + GF Sbjct: 324 ALQQTNDVESAMSEVESGVLKFGYHTANIIVM-HDDPVVLKEQAQKVRKAILELGFGARI 382 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN--------PLT 452 N + +L LP + + + L + N+++++P+ + P Sbjct: 383 ETINAVEAWLGSLPGHSQYNVRRPL--------LHTLNLSDMLPITSVWAGNEFNPCPFY 434 Query: 453 PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV-LDSGGFAV 511 P TY + + G +G GK+ + L Sbjct: 435 PEQSPPLTYTATTGHTPFRLSLHVGDVGHTLMLGKTGGGKSTALAFLAAQHFRYPDAQVF 494 Query: 512 VFDMGDGYKSLCENMGGVYLD----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN 567 FD G LC GG Y D L F P A I ++ + V +++ Sbjct: 495 SFDKGYSCFVLCNAAGGEYYDIAGEDSELAFCPLAQIDTKEEQSWAVEWVETLLVLQGVT 554 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 + + L+ A + L+ + + + V +++ M L+ Sbjct: 555 ITPNNRSLIYDAAQR--LSHSSVRTLTEFVSQIQDVG-----------------MRSALN 595 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR-PSLLVAVMFSLIIYIENRMYRTP 686 YT G G ++++ L+ + + V E+ L + ++ V+ L +E R+ Sbjct: 596 YYTVAGPLGHLLDAEKDGLK-NNRYQVFEMEHLMNMGEKAVIPVLLYLFRQVERRL---- 650 Query: 687 RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA 746 L IDE W L + E + + +T R+ A + TQ + D + S Sbjct: 651 DGRPTLVFIDEAW--LALSHPMFREKVREWLKTWRKKNAAAVLATQELADVMN---SPIR 705 Query: 747 RAAWGNSSYKIILKQ-SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 A + KI+L A+E A+ + Y + +++ + ++ + N Sbjct: 706 DAILASCPTKILLPNPEAQEPAQRDWYYEIGLNDREIEILATATPKRHYYY-----KSPN 760 Query: 806 HSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRKE 838 L + +S A + S + + + Sbjct: 761 GRRVFDLGLGAVSLAFVAKSSPEHIKQARAMIAQ 794 >UniRef50_UPI0001C42939 hypothetical protein BpOF4_20614 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42939 Length = 667 Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 101/654 (15%), Positives = 216/654 (33%), Gaps = 92/654 (14%) Query: 222 PKRRQLDPYSDLNYQCVEDSFD--LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAF 279 P RQ++ VE++ + + D+ + + P Sbjct: 25 PSLRQVNERPLSFPSLVENALNDGITFHNDHFQMQTALGVLKYGRSFF-IKPSGYPRTVR 83 Query: 280 L-WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF 338 + W S+ ++ + + PF ++ + K +E + L+ +K Sbjct: 84 IGWLEGLFTSDDMDCSIHVE-PFNRSVAVR-----KLKTEIDRLEAVLDSAAKNDNHSRV 137 Query: 339 PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 ++ ++ L+ ++ + Q+ + + + F ++ E ++ EL Sbjct: 138 EETMQKVQDTRFLQGQIRNNQNGLYYVSVQASIFA-NSYEELNSKCVEVEREVSAESIEL 196 Query: 399 ISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLA 458 IS +L+ LP + + + + P + G+ Sbjct: 197 ISAHGRQKEGWLSTLPLGRNYLAKSD-------RNLDQQALTAIFPHSSSKLNHTGGIPI 249 Query: 459 PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGD 517 N+ + + F +N NYN+ V G SG+GK+ ++ +I G V+ D+ Sbjct: 250 GVSGNEYVYYNQFDAKLN--NYNLGVFGESGSGKSTFLKQVIGRGFMDGINRTVILDVEP 307 Query: 518 GYKSLCENMGGVYL------DGETLRFNPFANITDID------------------QSAER 553 Y S+ + +GG + ++ R NP + + + + Sbjct: 308 EYVSMAQALGGTVIVIRSDDSQQSSRINPLDLYAEKEVKNPGTADEYIVERVNLTEKIKE 367 Query: 554 VRDQLSVMASP----NGNLDEVHEGLLLQAVRASWLAKENRAR-IDDVVDFLKNASD--- 605 V + VM L V G+L + + K D + + ++ D Sbjct: 368 VIEFFKVMKETTAGYEAKLTPVELGMLNDILENLYRVKYQITDDPDSLYEQVQKIDDVGN 427 Query: 606 ---SEQYAESPTIRSRLDEMIVLLDQ--------------YTANGTYGQYFNSDEP---- 644 +Y PTI +E++ L +T +G F+ Sbjct: 428 IQWERRYVPMPTISDVYNELLHLAQSGEDQLVDLINVVKLFTQGKAFG-LFDGQTTLAGN 486 Query: 645 -SLRDD-AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 S+ D + ++V ++ L + + L+ +I NR + KK V DE W L Sbjct: 487 ASVNLDTSPIIVFDISKLSESGAERPLAQHVLMTWIWNRFVKNDPKSKKRIVQDEAWMTL 546 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 +K +F + R+ + ++Q ++ + A+ LKQS Sbjct: 547 RYKTWI--DFFKLLSARGRKWNVSLTLVSQR---YEMFHRTQEAQDIIAQLGSVAFLKQS 601 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP 816 ++ A + + +F D+I +L+ +L +P Sbjct: 602 DQDIACILETF--KFSGEVGDLIRTADQG------EVILKA--GKEVVQLISEP 645 >UniRef50_A1VQ79 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ79_POLNA Length = 814 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 92/494 (18%), Positives = 167/494 (33%), Gaps = 60/494 (12%) Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 ++ ++ N + + Q + GF N + +L +P + Sbjct: 336 FGFYTSVILLSSANLQQLRDAAQYVTKMIANAGFSARVESVNAVEAYLGSMPGNLYANVR 395 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPL------------TPAGLLAPTYRNQLAFIDI 470 + L + N+A+L+PL A + L A T + + Sbjct: 396 RPLVN--------TLNLAHLLPLTAIWAGPDAHPCPFYPEHSAPLLQAKTDGATPYRLCL 447 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMGGV 529 + +T A+ G +G+GK+ L+ L+ G A VFD G L GG Sbjct: 448 HAGDLGHT----AIIGPTGSGKSTLLATLVAQHFRYPGAQAFVFDKGYSMFPLVAAAGGQ 503 Query: 530 YLD----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL 585 + D + + F P I + + S+ + L +AV Sbjct: 504 HYDIAGESDNITFCPLGQIDNELERTWAAEWLESLAELQGVAMSPELRKELFRAVNQL-A 562 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 A + A + +FL D + + L+ Y+ G+ G+ +++ Sbjct: 563 ASTDCAEQRTLSNFLLTLQD--------------NRLREALEYYSLRGSAGRLLDAESDG 608 Query: 646 LRDDAKMVVLELGGLEDR-PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF 704 L+ D V EL L R +++ V+ L +E R L V+DE W +L Sbjct: 609 LQADI-FQVFELEHLMARGEKIVLPVLAYLFHRLEQRF----HGQPTLLVLDEAWIMLGH 663 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 I + + R+ A I TQ++ D S A + + KI+L Sbjct: 664 --PAFRAKIREWLKVLRKSNVAVIFATQSLSDL---SGSGIADVIFESCPSKILLPNPQA 718 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV-DPLSRAMYS 823 + LY L ++ I K Q++ + S L + P + + Sbjct: 719 QTEALCGLYQAIGLNRRQIQIVSNAIPKRQYYH----LHPDGSRVFELGLTPPEMAFVGA 774 Query: 824 SDGPDFEFVQQKRK 837 S D ++ +K Sbjct: 775 SGREDLARIRHLQK 788 >UniRef50_C3WQ25 Conjugal transfer protein trbe n=3 Tax=Fusobacterium RepID=C3WQ25_9FUSO Length = 824 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 83/583 (14%), Positives = 184/583 (31%), Gaps = 65/583 (11%) Query: 290 LLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWG 349 + + + + + + + S+ K+ + + + E + Sbjct: 241 MFDELNRLGFEYRWVTRFMFLSKQEALSKLEKKWKATFSGRISMLKRVKMELTGEKEPTK 300 Query: 350 ELRQRLGSGQSSVVSYFLN------------ITAFCKDNNETALEVEQDILNSFRKNGFE 397 L L + E + I N+ K GF Sbjct: 301 IDEDALEKADEINTQLNLTRADILSQGFYSCAIIIYGNTIEDVDDKALKIENTINKLGFI 360 Query: 398 LISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV----ADNPLTP 453 I+ N + FL +P + + + ++ +L+P D Sbjct: 361 TINETVNCVETFLGAIPGNIYNNVRTPILN--------TISLCHLLPTSSVWAGDKWNKE 412 Query: 454 AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVV 512 + Y F + + G +GAGK+ + + + Sbjct: 413 LNMPPLVYTQTNGSTAFRFNLHVGDIAHTCIIGPTGAGKSTALGLINAQYKKYPNSQVFI 472 Query: 513 FDMGDGYKSLCENMGGVYLD--GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNL-D 569 FD G + L +G + D + L F P I + + + ++ + NG + Sbjct: 473 FDKGGSARILTYAIGETFFDLGVDNLTFQPLRGIGILKNNLDEDEKKIRSLKEKNGEVFS 532 Query: 570 EVHEGLLLQAVRA-SWLAKE--------------------NRARIDDVVDFLKNASDSEQ 608 E+ + +L + ++ E + +I ++ L + + + Sbjct: 533 ELDKQKILNKEKERAYRELEWANEWVLEIFAQENIELNQVQKTKIWQALELLATSEEKFR 592 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 + E+ L++YT G G++F+SDE + + V E+ + + S + Sbjct: 593 TISNLRTSLNDRELKDTLEKYTIKGALGRFFDSDEENFSF-SDWQVFEMEKIMNVKSAVT 651 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 ++ L +E ++ P + V+DE W F N + I + + R+ I Sbjct: 652 PLLSYLFHKVEEKLTGAP----SIIVLDECWLF--FDNEQFANKIREWLKVLRKKNTGVI 705 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDMIGK 787 TQ + D + K + KI L + Y+ +Y + +I + Sbjct: 706 FATQELGDIMNSKLFTT---ILDACLTKIFLPNANALADNYSVIYKKFGLNSKEIQIISE 762 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFE 830 KD ++ + S L + + + ++ P+ + Sbjct: 763 ATPKKDYYY-----KSPKGSRLFELVLGQNTLKLVGANDPEVQ 800 >UniRef50_A8L0V0 Type IV secretory pathway VirB4 protein-like protein n=9 Tax=Actinomycetales RepID=A8L0V0_FRASN Length = 657 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 100/567 (17%), Positives = 183/567 (32%), Gaps = 64/567 (11%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANL-------KYMDLEKKSKTSYAKWFPSV 341 + P L+ P L + L ++ + L + + A P + Sbjct: 77 GWMEPLLAY--PGRLDVALHIDPTPPAVAALRLRRQLGRLESGRRADAAAGRLAD--PEL 132 Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP 401 + A++ GEL +++ G++ + L +T + D+ E E + + Sbjct: 133 DAAAQDAGELARQVARGEARLFRTGLYLTVYA-DSREELAEEAARVTALAHSLLLTVRRA 191 Query: 402 RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL----------MPLVADNPL 451 R+ ++ +++ LP ++ + + F +L P+V L Sbjct: 192 RYRSVQGWVSTLPLGLDLLQIRRAMDTQALAAGIPFTTPDLPLPDVERPGAAPVVYGTNL 251 Query: 452 TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV 511 AG++A Q NYN G SGAGK+ L++ + L G A Sbjct: 252 HSAGIVAHDRWAQP-------------NYNSVTTGASGAGKSFLMKLDLLRSLYQGVEAA 298 Query: 512 VFDMGDGYKSLCENMGGVYLDGETLR--FNPFA------NITDIDQSAERVRDQLSVMAS 563 + D D Y L +GG L NP + D+ L Sbjct: 299 IVDPEDEYGRLAAAVGGTRLALGEPGVHLNPLDLPAHSHHDPDLLTRRALFCHTLITTLL 358 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN---ASDSEQYAESPTIRSRLD 620 + D A+ A+ L+ A I A + Sbjct: 359 AGTDDDSGLGAGGRAALDAAILSAYRAAGITHDQATWTRPAPLLADIAAALTAAEDPAGP 418 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIEN 680 + L + G++ F + + +VV L L D L A + I Sbjct: 419 ALAARLAPFVT-GSHAGLF-AHATTTSPTGHLVVYSLRALPD--ELKAAGTLLTLDAIWR 474 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 + R ++L V+DEGW L+ + F+ + + AR+H TQ+ D S Sbjct: 475 TVADPARRRRRLVVVDEGWLLM--AHPAGARFLFRLAKAARKHWAGLAVATQDSADLLS- 531 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 S RA N++ +I+L+Q +++ + + G L Sbjct: 532 --SELGRAVVANAATQILLRQDPTVIDDLRRVHRLTDGEATQLLTAGPG--------DAL 581 Query: 801 LQVENHSSWHRLFVD-PLSRAMYSSDG 826 L + P + ++D Sbjct: 582 LLTGTGQRTALHALASPAEYDLITTDP 608 >UniRef50_C5F2I9 Type IV secretion/conjugal transfer ATPase n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F2I9_9HELI Length = 821 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 141/845 (16%), Positives = 279/845 (33%), Gaps = 107/845 (12%) Query: 40 FSRLLPYRDYNQESGLFMNDT---TMGFMLEAIPINGANESIVEALDHMLRTKLPR-GIP 95 F +L Y + E G+ +N T GF A I+ + L + + L G Sbjct: 14 FPDILNYASFIDE-GILLNKDGSLTAGFYYRAGDISSMTINERNTLSARINSVLKTLGNG 72 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL-- 153 +H+ S++ + E + ++ + R +Y L + L Sbjct: 73 WAVHIDCSRI---KTENYIDGDTFYQSNIAQILENERKHYFDNVEHFENLFTMIFTYLPP 129 Query: 154 ---TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 + + I + +K +S + +N+++ + SL +I I Sbjct: 130 HKNISKITDLMIIDETKNKNQSNKILEYFKNILQKLEDSLS------------NYIKIER 177 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 + D + D +N+ + + + + L GR+ + Sbjct: 178 MLPRTAIDEYNNEYILDDMLEYINFCICGERQKIILPNAPMFLDCLLGGRHFETGMYPRI 237 Query: 271 LARNPEIAFLWNMA-DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 ++ I + ++Y N+LN ++ + + D + N ++K Sbjct: 238 DNQHIGIIAIEGFPSESYPNILNALTELNFDYRFNTRFIFLDDFDAQNSLNKYRKKWQQK 297 Query: 330 SKTSYAKWFPSVEKEA--------KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 +K + + +E +G Y NI F +DN E+ Sbjct: 298 TKGWVDQLLDRPARRLDNHAVLMVQELDSALAESKTGLLGYGYYTANIVVFDRDN-ESLE 356 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 +DI GF + N + +L LP L + + + N+ + Sbjct: 357 HKLKDIRKVLENLGFLSRTETINSVEAYLGTLPGFVYPNLRRPVLN--------TLNLTH 408 Query: 442 LMPLVADN------------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSG 489 L+PL + P +P + T N +++ + +T + G +G Sbjct: 409 LIPLASIWAGEKYNPSDKFPPNSPPLMQVVTSGNTPFRLNLHVSDLGHT----LIFGPTG 464 Query: 490 AGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL----DGETLRFNPFANI 544 +GK+ L+ + S FD G + GG++ D +L F P ANI Sbjct: 465 SGKSTLLANIFLSFQKYKNAKIYAFDKGQSLLAPTLATGGIHYNIAGDHSSLAFAPLANI 524 Query: 545 TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNAS 604 + A + + N N+ H+ L+ +A+ + K + + V L++ Sbjct: 525 KTEAEIAWAEFWIETCLKLQNVNVTPKHKKLIHEALISHINTK--STSLTEFVSALQD-- 580 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRP 664 +++ L YT +GT G F+S+E L + E+ L Sbjct: 581 ---------------NDLRDALSYYTISGTGGFLFDSEEDKLSLSN-ITTFEIEELMSLG 624 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 + ++YI NR+ R L +IDE W L + I + R+ Sbjct: 625 DQYIV---PALLYIFNRIERGLDGSPTLLIIDEAWIALKHS--AFKDKIVNWLKVLRKAN 679 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS-------AKEFAKYNQLYPDQF 777 A + TQ++ D S + KI L S A Y+ Sbjct: 680 VAVVMATQSLSD---SAKSGILDVLQESCPTKIFLPNSDAFKKGTETTLAPYDFYKIFGL 736 Query: 778 LPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS--SDGPDFEFVQQK 835 +Q +I ++ +++ + L + + ++ SD + V Q Sbjct: 737 NDVQIGIIANAIPKREYYYT-----SPLGTRLFNLALGK-TNLAFTGISDKIGVKRVNQL 790 Query: 836 RKEGL 840 ++ Sbjct: 791 YEKHK 795 >UniRef50_C5SH59 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SH59_9CAUL Length = 807 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 111/676 (16%), Positives = 212/676 (31%), Gaps = 95/676 (14%) Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASI------TTQTVDAQAFIDIVGEMINHNPD 218 PS ++ + M L + ASLQ + + + G ++N + Sbjct: 142 SLPSSEQRNDALSVMSALNDQVEASLQPYMPRRLSLKGSDRAPQSELLTLFGRLLNGVYE 201 Query: 219 SL---YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNP 275 + + P S L++ ++ ++ G+ + P Sbjct: 202 PIGLPHADISAWLPSSRLHFARYSSDVEIWHPLEHRFAGM-------------LDIQDFP 248 Query: 276 EIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYA 335 + LLNP L + ++ T + + ++ S + L ++ Sbjct: 249 RTSEP--------GLLNPLLYVDYDYVETQSFSILNRRDALSALLRQKGRLIATDDAAF- 299 Query: 336 KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG 395 +E + + L SG+ + Y ++ F + A + G Sbjct: 300 -------EEVGQMDQAMNDLQSGKLELGEYHYSLAVFGESPKRVARHLADARARLQDAAG 352 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-------AD 448 L + + LP G ++ + ++ S N A+L + Sbjct: 353 LRLSPVDLVPECAWFSQLP-----GNWRLRPRSALI---TSRNFADLAGFHNFTEGKASG 404 Query: 449 NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRS 502 NP A + T + + + N +CG +G GKT L L+ Sbjct: 405 NPWGQALAVFDTPSGHPYYFNFHDSPPDQKAQGEPYPGNTFICGATGVGKTALQSFLLAQ 464 Query: 503 VLD-SGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQL 558 G AV+FD G + GG Y + G FNPF + + + L Sbjct: 465 STKYEGLRAVIFDKDRGAELFIRASGGRYFQLISGRPTGFNPFQ-LPPTQTNLRFCQGLL 523 Query: 559 SVMASPN---GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTI 615 + S L E LL AV A A +D + L Sbjct: 524 MTLVSGGDGAARLTSSEEALLAHAVSAVM-----NAGVDTSLRSL-------SLVAQNLP 571 Query: 616 RSRLDEMIVLLDQYTANGTYGQYF-NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 R+ D + L ++ G F N+ + ++ + + D P + VM L Sbjct: 572 RAGADSLHERLRKWLRGERLGWVFDNAADLHDPASVQLSGFDYTDILDDPEIRTPVMAYL 631 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 + E + + V++E W+ L ++ +F +T R+ G + +TQ+ Sbjct: 632 LHRTEEMI----DGRPFIYVMEEFWKPL--RDPYFADFALNKQKTIRKQGGLGVFVTQSP 685 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D A + S +I L + Y + + P + ++ FG + Sbjct: 686 SDVL---AHPIGKTMVEQSVTQIFLPNPRADAEDYVDGF--KLTPTEFQILRSFGETSRK 740 Query: 795 WFSSFLLQVENHSSWH 810 L++ S Sbjct: 741 ----CLIRQGQTSRVV 752 >UniRef50_Q1M9N8 Putative crown gall-like type IV secretion system protein n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9N8_RHIL3 Length = 793 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 133/791 (16%), Positives = 254/791 (32%), Gaps = 100/791 (12%) Query: 14 SLVTALKLPDE-SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIP 70 S T L+ P +A++ + LPY + L + D + F++E Sbjct: 4 SWCTVLERPATRAARSLAIKRSEKGEMLVSGLPYLSAVDDVTLMLRDGDLMGSFVVE--- 60 Query: 71 INGANESIVEALDHM-LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNA 129 G N V++ + L R I ++ RI R FN Sbjct: 61 --GINAETVDSFHTVELCNAFSRFIAQQRSDVA--YYVHRISVETRPTMPPVGGHP-FNE 115 Query: 130 ITRAYYMKAAATQFPLPEGMNLPLTLRHYRV---FISYCSPSKKKSRADILE----MENL 182 + T + L +R R F+S SR ++ ++ + Sbjct: 116 EIDRRWQGYLQTVGLRDRVTVVTLVIRPPRKTTKFLSLFGGRDVHSRHEVEARALRLDQM 175 Query: 183 VKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDL-NYQCVEDS 241 + + A + TV ++ ++ +I+ + SL P + L L + Q Sbjct: 176 INTCMVGVGEAGPSRLTVSDGRWLGLLRTLIDGSGGSLIPGTKFLPVADLLASSQITFQG 235 Query: 242 FDLKVRADYLTLGLRENGRNSTARILN-FHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 + E + R + P + + L++ Sbjct: 236 PVFE----------CEGTDPARRRFGTIVSVKDYPAETYPGIL---------DRLNLPYN 276 Query: 301 FILTLTLVVEDQVKTHSEANLKY---MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 ++T + D + + E + + A+ E + S Sbjct: 277 TVVTQSFTPIDPISAQGKIARVRKQMRAAEDAAISLMAQL-----------EEAEDDVAS 325 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 G+ + ++ FC D+ + + + + G ++ F+ + P Sbjct: 326 GRVIFGDHHCSVAVFC-DSLKELDGAMAYVTRAMQDAGAAIVRENFSSRVVYFAQHPGNF 384 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA--------GLLAPTYRNQLAFID 469 S N A L + + +P + PT R + + Sbjct: 385 AY--------RTRPAMISSQNFAQLCAMHGQSKGSPPDKCPWGDAVTIFPTARGETFRFN 436 Query: 470 IFFRGMN--NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG 527 G T + V G +G+GKT LI G ++FD +G++ MG Sbjct: 437 FHLPGKPGQRTVGHTLVLGQTGSGKTLGTAFLISQAQRLGARTILFDKDNGFEMAVRAMG 496 Query: 528 GVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPN-GNLDEVHEGLLLQAVRAS 583 G Y G+ FNP D + A + D L+ +A + G L+ V L AV+A+ Sbjct: 497 GCYSAVRMGDETGFNPMRAEAD-SRGAAWLMDWLAALAENDGGKLNPVQIQALSDAVQAN 555 Query: 584 WLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS-D 642 A ++ L+ D ++ L ++ G +G F Sbjct: 556 TTADPRLQNLEQFRSQLRATDDD-------------GDLYNRLGRWDETGQFGWLFGGKG 602 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 L D ++ +L + D + A + + +E L V+DE W+LL Sbjct: 603 LDPLAFDNRLTAFDLTEIFDNDVVRTAWLSYVFRRVER---LVEDEHPTLLVLDEAWKLL 659 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 D N ++ T R+ A + +TQ + + S+A A ++ +++ S Sbjct: 660 D--NPYFEARLKDWMLTMRKKNVAVVLLTQRVSHIKN---SAAGDAILESAVTRLVYTSS 714 Query: 763 AKEFAKYNQLY 773 A+ L+ Sbjct: 715 FNTAAELAPLH 725 >UniRef50_Q3ZVN3 TRSE-like transmembrane ATPase n=8 Tax=Spiroplasma RepID=Q3ZVN3_SPICI Length = 840 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 83/536 (15%), Positives = 178/536 (33%), Gaps = 32/536 (5%) Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 + + +++ S ++L + D + T + + + + +T Sbjct: 280 KFVSYFTVNQFPLIVNDMWLSNFSEIENVNISLRVRHLDNM-TAFKLLDRAIRRAQDQET 338 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 A + + EL Q + G ++ + T F D+ +V ++ N Sbjct: 339 KKASEDIEYNLYLQNFNELLQLIQVGGETLKMVSIIFTCFA-DSKTGLDQVVSNLKNEMI 397 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 +N F + F + L K + Q + +A P + Sbjct: 398 RNRFTVNDLTFRQFTTYKFLL-------FNNNDKLKNIEQEMATITLACSWPFPSKPLND 450 Query: 453 PAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV 511 P GL + + Q DI + ++N + G G GKT ++ + + + Sbjct: 451 PCGLIMGENEQIQPIIFDIKTKSSIRASHNAFIVGQMGFGKTFNVKKQLNWLYCNNTKIY 510 Query: 512 VFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITD-IDQSAERVRDQLSVMASPNGN 567 + D Y S GG ++ + NP TD + + + S + Sbjct: 511 IIDPQREYGSFANYHGGEIIEFGNNPKAKINPLEIFTDNFSEHISLLEQWFKNLYS---D 567 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 L + L + + + + A + K+ T + + + +L Sbjct: 568 LTNIDLAKLQEYIIQLYKNFKITADTNLSQLTRKDYPILIDLYNLITKKEQDTLLEKMLW 627 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 + T G G FN L + ++V ++ + ++ A M+ L+ ++ M + Sbjct: 628 KLTK-GADGTLFNGVST-LEIKSDLIVFDIYNMAKSKTIANAQMYLLLALLDRVMKKNKE 685 Query: 688 NLKKL---------NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 + L +DE L++ N ++ +T R+ G +TQ+I DF Sbjct: 686 DNLNLPPEQQSWVCIAVDEAHLLINEDNLLALNYLFSLSKTCRKFNGILFILTQSIGDFT 745 Query: 739 --SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ--FLPLQRDMIGKFGA 790 + AR +Y+ I ++ Y +L D ++++I Sbjct: 746 QHGENVKRQARGIIEQCTYQFIHHLNSIGLQNYTELLTDNNMINAYEKNVILTPKK 801 >UniRef50_A5TXM1 Possible conjugal transfer protein TrbE n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TXM1_FUSNP Length = 912 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 88/540 (16%), Positives = 182/540 (33%), Gaps = 72/540 (13%) Query: 339 PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV-EQDILNSFRKNGFE 397 P+ ++ + + + T K+ N +E Q++ GF Sbjct: 368 PNQSAMNAAIEVRDEKTKLDEDRDIVGYYTTTVILKNKNRDIVERQAQEVRTLLSSLGFV 427 Query: 398 LISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL------ 451 + F + +L +P + + V+ ++++P+ + Sbjct: 428 VQIEDFYTLDCWLGVMPGNNYFNERRPFMNSKVL--------SHMLPINSVWAGNKWNKH 479 Query: 452 --TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GG 508 TP L T N +++ + + +T + G +G+GK+ L+ L + L Sbjct: 480 LDTPPLLYCQTTGNTPFRLNLHYTDVGHT----LIVGPTGSGKSVLLGTLQSAFLGYKNA 535 Query: 509 FAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFANITDIDQSAERVRDQLSVMASPNG 566 + FD G K L GG++ D + +RF P + + + + + + N Sbjct: 536 KVIGFDKGASTKILNRAYGGLFYDLGKDNIRFQPLRGVGILQTN---IDIEFEKIKKNNR 592 Query: 567 NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDE----- 621 NL + + V E +F++N + +P IR Sbjct: 593 NLSDETIRKKAEEVEKKRSDIEKEW----CQEFIENLLEDNHVQITPEIRQYTWNGLVSL 648 Query: 622 -----------------------MIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 + L QY G Y +YF+ + L ++ + E+ Sbjct: 649 GSLSPEMRTLSSFSNLVGGQSKTIKDALAQYCGKGPYAKYFDGNSDFLENNN-YTIFEME 707 Query: 659 GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR 718 + + + + + L IE M + L +DE W LD N + I + + Sbjct: 708 QIAEAKNAITPALNYLFHKIETDMI--DKISPTLITLDESWLFLD--NPRFESKIREWLK 763 Query: 719 TARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL 778 R++ + + TQ++ D S A +I L + ++ + Y F Sbjct: 764 VMRKNNVSVVFATQSLADIAE---SKIKSAILDACYTRIYLP-NTTALSEVQKGYYKMFD 819 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRK 837 R++ + + + + + S L + PL A + +S G D E + + Sbjct: 820 LNDREIEIIYQSIPKKHY---YFKNPQGSRLFELALSPLELAYVAASSGEDKEKCDELAE 876 >UniRef50_Q1JB81 TRSE protein n=26 Tax=Bacteria RepID=Q1JB81_STRPB Length = 809 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 107/710 (15%), Positives = 237/710 (33%), Gaps = 76/710 (10%) Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG--- 192 + + L + ++ V +S C + +I E N + A L G Sbjct: 145 YRKEYNKMLLDKATGANAIVQDKYVTVSVC-------KKNIEEARNYFARVGADLIGHFN 197 Query: 193 -ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 +DA + I + ++ + L +++ + DY Sbjct: 198 RLGSKCVELDAGEKLRIFHDFYRTGEETGFAFDMLLSMRKGHDFKDYICPDTFEFEKDYF 257 Query: 252 TLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 +G R L A + + + + + N++ + P + + Sbjct: 258 RIG----DRYGRVIFLR-EYAAYIKDSMVAELCELNRNMMLSVDVVPVP--TDEAVREVE 310 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFP-SVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 E N+ ++ +++ P +E++ KE E L + ++ L Sbjct: 311 NRLLGVETNITNWQRKQNQNNNFSAVIPYDLEQQRKESKEFLDDLTTRDQRMMFAVLT-M 369 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 + E + +L + RK+ + ++ M T LPF +++ Sbjct: 370 VHTAETKEQLDNDTEALLTTARKHLCQFAVLKYQQMDGLNTALPFG--------VRKIDA 421 Query: 431 VQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 ++ + ++A +P G+ +N ++ I + N N + G SGA Sbjct: 422 LRTLTTESLAVFIPFRVQEIYHENGVYYG--QNVISKNMIIANRRHLLNGNSFILGVSGA 479 Query: 491 GKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANIT 545 GK+ + + + + D ++ D Y L + M G + N + Sbjct: 480 GKSFTAKEEMTNIILTDPNADVIIIDPEREYSPLVKAMQGEVIHISATSESHINAMDMNS 539 Query: 546 DIDQSAERVRDQLSVMAS------PNGNLDEVHEGLLLQAVRASWLAK------ENRARI 593 D A V + + S +L + ++ + + + + Sbjct: 540 DYGDGANPVILKSEFILSLCEQLIGGNSLGAKQKSIIDRCTASVYRYYQQGNYMGTPPTL 599 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 D + L ++ E E+ + ++ +T +G+ + + ++ ++++ Sbjct: 600 QDFREELLKQNEPE-----------AQEIALAIELFT-DGSLNTF--AKHTNVDTKSRLI 645 Query: 654 VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEF 712 ++ L L M ++ I NR+ + + IDE L F++ F Sbjct: 646 CYDILDLG--KQLQPIGMLVVLDSILNRITQNRAKGRNTFIFIDEI--YLLFQHEYSANF 701 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + ++ R++ ITQN+ D S AR NS + I+L Q++ + + +L Sbjct: 702 LFTLWKRVRKYGAYCTGITQNVDDLLQ---SHTARTMLANSEFIIMLNQASTDRLELAKL 758 Query: 773 YPDQFLPLQRDMIGKFGAAKD---QWFSSF-LL-QVENHSSWHRLFVDPL 817 LQ I GA + S + Q ++ +RL Sbjct: 759 L--NISDLQMSYITNVGAGQGLLKVGSSLVPFVNQFPRNTELYRLMTTKF 806 >UniRef50_A1B6Y4 AAA ATPase n=92 Tax=Bacteria RepID=A1B6Y4_PARDP Length = 877 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 104/687 (15%), Positives = 213/687 (31%), Gaps = 99/687 (14%) Query: 184 KIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFD 243 + A L G +D + + I+ N + + + L Q + + Sbjct: 162 DRVLALLDGFMPECAWLDDGETLTYLHSTISTNRQRVRVPEVPMHLDALLADQPLTGGLE 221 Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFIL 303 ++ +L + I F A P +L+ I+ P+ Sbjct: 222 PRLGDAHLRV----------LTITGFPTATTP-------------GILDELNRIAFPYRW 258 Query: 304 TLTLVVEDQVKTHSEANLKYMD--LEKKSKTSYAKWFPSVEKEA----------KEWGEL 351 + ++ D+ ++KS + K + E A + Sbjct: 259 STRAILIDKPDATRLLTRIRRQWFAKRKSIAAILKEVMTSEPSALVDTDAANKAADADLA 318 Query: 352 RQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT 411 Q LG+ + + +T + D A E + + + F + N + +L Sbjct: 319 LQELGADVAGMAYVTATVTVWDAD-PRLADEKLRLVEKIVQGRDFTAMIETVNAVDAWLG 377 Query: 412 CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT--------PAGLLAPTYRN 463 LP A + + N+A+++PL A P T Sbjct: 378 SLPGHAYANV--------RQPPVSTLNLAHMIPLSAVWAGEAKDAHFDAPPLFYGKTEGA 429 Query: 464 QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL-DSGGFAVVFDMGDGYKSL 522 + + +T V G +GAGK+ L+ + S FD G ++ Sbjct: 430 TPFRFSLHVGDVGHT----LVVGPTGAGKSVLLALMALQFRRYSRAQVFAFDFGGSIRAA 485 Query: 523 CENMGGVYLD---------GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHE 573 MGG + D ++ P A I + + +++ + + Sbjct: 486 ALAMGGDWHDLGGGLSDGDEASVALQPLARIHETAERGWAADWIAAILRREGIAVTPEVK 545 Query: 574 GLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 L A+ + A + L++ + L Y G Sbjct: 546 DHLWTALTSLASAPVGERSVTGFAVLLQSNG-----------------LKQALRPYCIGG 588 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 G+ +++ L A + E+ GL + +++ Y+ +R+ L Sbjct: 589 PSGRLLDAEAEHL-GSAPVQAFEIEGL-----VGTGAAPAVLSYLFHRIGDRLDGRPTLL 642 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 +IDEGW LD + + + +T R+ + + TQ++ D D S+ A A + Sbjct: 643 IIDEGWLALD--DEGFSGQLREWLKTLRKKNASVVFATQSLSDIDH---SAIASAIIESC 697 Query: 754 SYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 +++L + +Y L ++ I K ++ Q + L Sbjct: 698 PTRLLLPNERAIEPQITAIYRRFGLNDRQIEILARATPKRDYY----CQSRRGNRLFELG 753 Query: 814 VDPLSRAM-YSSDGPDFEFVQQKRKEG 839 + + A+ +S D + E Sbjct: 754 LSEIGLALCAASAKSDQARIAAIESEH 780 >UniRef50_B2TS95 Putative uncharacterized protein n=8 Tax=Clostridium RepID=B2TS95_CLOBB Length = 637 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 84/466 (18%), Positives = 169/466 (36%), Gaps = 58/466 (12%) Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 + + + IL G+ + + +L + S Sbjct: 146 DELDKKAKTILERLEGLGYRGAIFLNEQEYEWKS---LFLSSTEQSKLPNKRNEKGIPSI 202 Query: 438 NVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 + P P G+ L T D+F + +YN V G G+GK+ L+ Sbjct: 203 SFGGGYPFHFTELNDPTGMYLGTTKTGGNVIFDLFTKDDIRKSYNALVIGLMGSGKSTLL 262 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPFANI-TDIDQSAER 553 + ++ + +FD+ +K+L +GG + DG NP T ID+ Sbjct: 263 KKILNNNGIVNNTIRIFDIAGEFKTLVRILGGEVIALDGSDGIINPLQIFATIIDEDTNE 322 Query: 554 VRDQLSVM------------ASPNGNLDEVHE----------GLLLQAVRASWLAKENRA 591 + ++ S M +PN N +E+ E + +A+ Sbjct: 323 ILEEQSYMQHLSKVSMMYQFLAPNANSNEIREFEKSLSNFYSSFGIDTRKATQYETNEYP 382 Query: 592 RIDDVVDFLKN------ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 ++++++FL N + + + RL+ +I+ L+ + YG+ FN Sbjct: 383 IMEELIEFLLNELYENVQKGILKANITNNRQERLENIILTLEGTVRD--YGKLFNGHTTI 440 Query: 646 LRD-DAKMVVLELGGL-EDRPSLLVAVMFSLIIYIEN----------RMYRTPRN----- 688 + ++V E+ L + + A F+++ + N + + R Sbjct: 441 KDITNKQIVSFEVRNLVQFDKRIFNAQTFNILTMLWNNALLQGLVEKKAFDEGRKTTMEA 500 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA-- 746 +K L ++DE + ++ N +++ R AR++ G I TQ+I D D SS A Sbjct: 501 IKYLVLMDEAHKFINSNNIMAVDYLINFEREARKYFGGLIFATQSIRDVVPDNTSSEALE 560 Query: 747 --RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 R + + YK I++Q +++ Q + + + G Sbjct: 561 KIRTLFELTQYKFIMQQDNNSKKSLAEIFDGQLTESEIETVPFMGT 606 >UniRef50_C7N9N6 CagE TrbE VirB component of type IV transporter system n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7N9N6_LEPBD Length = 827 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 104/731 (14%), Positives = 244/731 (33%), Gaps = 97/731 (13%) Query: 167 PSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQ 226 +++ ++ V A L+ A+ + + + + + +N + +P++++ Sbjct: 149 KMAEEAERELKIFRQKVASFIALLKYATTSIEVLQGDELMAYMYSTVN----AEFPEKKK 204 Query: 227 LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 + L YL+ ENG+++ +I A++ + D+ Sbjct: 205 M------------PKSSLYPIDQYLSNSSFENGKDT--KIQRLTKAKHLRTISINLFPDD 250 Query: 287 YSN-LLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA 345 + +L S+ F ++ ++ + ++ + K K ++ ++ + Sbjct: 251 IESRVLKKLESLDFEFRMSARYIILSPNEAKKMLKNFFIFHQGKQK-NFGQYITEAITKK 309 Query: 346 -------------KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 +E G + Y I +D + + I+ F Sbjct: 310 PSFNIDELELAKTEEAKMALNEFKEGGINYGYYTFTIILADED-LKRIEDNALKIVTIFD 368 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 + F ++N ++L +P + K S ++ L P + Sbjct: 369 EQDFTCSIDKYNIFPSYLGAIPGNVKANIRK--------YPINSMLLSCLFPTSSLYRGE 420 Query: 453 PAG--------------LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 ++ T N + + ++ + +T + G + +GK+ L+ Sbjct: 421 EVNEFFRDKKNITGVPLMMTKTDLNDIFYFNLHIKDAAHT----LIAGPTRSGKSVLLGM 476 Query: 499 LIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD-----GETLRFNPFANITDIDQSAE 552 + + FD G + L MGG + D L F P ANI + A Sbjct: 477 ITAELKKYPNAQVFFFDKGGSIRVLTACMGGKFYDLGKGGDNDLAFQPLANIHIETERAF 536 Query: 553 RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES 612 +S++ N + + + + + NR + + + N Sbjct: 537 ASNWIISLLQQENVIVTPDMKSTIWETLTTLSNDPPNRRTMTNFAFTVMN---------- 586 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 E+ L+ YT G+YG+YF+++E + D+ V E+G + + P ++ Sbjct: 587 -------KEIQQALEPYTNTGSYGKYFDNNEDNFS-DSNWQVFEMGRIIEDPKATAPILS 638 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 L I + + ++ V+DE W ++ ++ ++ RT + I TQ Sbjct: 639 YLFHRI--EVEKLTKDYLTAIVVDEAWFAMENESFRLK--FNDWLRTLAKLNAFIIFATQ 694 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 ++ + + + A KI+L + + D + + I A+ Sbjct: 695 SLDEIAKSEITP---AIVDGCKTKILLPS-----PQAQNYWKDLYSKFGLNSIEIEKVAR 746 Query: 793 DQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 + + + + S + + + A + S+ D +Q+ E + E + Sbjct: 747 GEMQKQYFYKSDLGSREFEMDLGKIELAYVGSASSTDQMKIQEICAETKDLKEINLKWLE 806 Query: 852 KKSGPEMASLE 862 K G Sbjct: 807 YKLGKNSKEFR 817 >UniRef50_B1BR05 Putative Conjugative transfer gene TrsE homolog, ATPase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BR05_CLOPE Length = 901 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 96/583 (16%), Positives = 204/583 (34%), Gaps = 71/583 (12%) Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNP---EIAFLWNMADNYSNLL 291 + + S+ ++ D S + + + P + L ++ + + + Sbjct: 295 FNILSTSYTEIIKPDVFMEKSDYIQLGSISYVRCLAVTTLPSSINVFTLNSLNNIENMEI 354 Query: 292 NPELSISCPFILTLTLVVE-DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGE 350 N L ++ L E +++ ++ K + ++ A Sbjct: 355 NISLQKLNDARMSKVLRNESNKIISNIHLKEKQTGALEHAQRKMA----------ANIEG 404 Query: 351 LRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFL 410 L + + + + S + I + +N + + + +F K L + F+ Sbjct: 405 LIEAIETNSDKLFSAQIIIKLWS-NNLIELENMTKTVKENFEKTAMNLRVLFKDQKNAFM 463 Query: 411 TCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFI 468 T LP +K+ K+ + + L+P + G N + Sbjct: 464 TTLP--TPVIAYKESKK-----NFTAGAASCLIPNGCTHLRHSEGRFIGRSLITNFPIIL 516 Query: 469 DIFFRGMNN-------TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 D F + +N N+ + G SG+GK+ ++ I L G V+FD YK Sbjct: 517 DHFICQKPDQPESEMYSNSNVYIVGKSGSGKSSFLKLQIARSLLIGDVHVIFDPHGEYKK 576 Query: 522 LCENMGGVYL---DGETLRFNPFANITDIDQSAER---------------VRDQLSVMAS 563 + + +GG Y+ +G NP ID + + + ++ Sbjct: 577 MIDKLGGKYVYLRNGIKTGINPLEIKVIIDDITKEKTVPVNEKIAEITALINNFIATYRK 636 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDF----------LKNASDSEQYAESP 613 N L + +AVRA + + + + + + L SD + E Sbjct: 637 DNVGLVGAEITTVTEAVRAIYEERGITSNPESLFEINDNGEKVKKNLPTLSDLKLELERN 696 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL--RDDAKMVVLELGGLEDRPSLLVAVM 671 + +L E+ ++ T +G + + + D ++V L L+D M Sbjct: 697 --KEKLPEVAEMMKIITGDGIMSLFDCQTDEEIAHMLDTRLVCFSLKELDD--VTKTYAM 752 Query: 672 FSLIIYIENRM-YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 +L+ ++ ++K IDEGW L K+ + E +E R+ R++ + Sbjct: 753 TTLLNWLWAMFSAWELAGIQKNIDIDEGWLL--SKHKQSLEILENYSRSGRKYMISLTIA 810 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 +Q+I +F + +A S+K I +Q AK + + + Sbjct: 811 SQSIQEFLG---TPEGKAILDACSFKYIFRQDAKLSNEIGEYF 850 >UniRef50_C2BRH4 Transfer complex protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRH4_9ACTO Length = 740 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 110/726 (15%), Positives = 231/726 (31%), Gaps = 83/726 (11%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E I+E H L + L G + + +++ L +R+ + + S G+ + R Y Sbjct: 19 EGIIEKYAHFLNSHL-SGQHVQVTVLNRVLNKERLARDV-QLSPRGDGYDA----QRGEY 72 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 + L G N +T + +++ + A + + A + Sbjct: 73 NDLIVQR--LQNGRNNVITEK----YVTLTVEAPTLEEAKTVLSRIAAEDAAALHEVGGC 126 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 ++ + ++ + ++ + L F V + Sbjct: 127 HAVQLNGEERARLLQHFLRPGAETDFKYE------ELLAQAATTKDF---VSPWSIDTSS 177 Query: 256 REN---GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 RE G T+ L + P ++ + +L I ++L + DQ Sbjct: 178 REYIGLGSVRTSYWQVLVLRKLP--PWMSD------RVLKELSEIPVDLTVSLHIDPLDQ 229 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPS----------VEKEAKEWGELRQRLGSGQSSV 362 + + ++ + T K ++ E +LR +L + Sbjct: 230 SEGLKLVKRQIASMDMQRGTEQRKLIKQGLTYDLLPHELQASYDEAVDLRTQLEQSNEKL 289 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + + + E E + ++ K+ +L R+ + LP Sbjct: 290 FETTI-VVGVAGETVEEMHENVKRVMRVAGKHSCQLEVLRYMQLDALNALLPLG------ 342 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 + + + + + A ++P + P GL N L+ I N N Sbjct: 343 --VCKLPISRMLTTAVAAVMVPFTTQEIMQPGGLFYGI--NALSKNLIVADRREGMNSNG 398 Query: 483 AVCGTSGAGKTGLIQPLIRSV--LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLR 537 + GT+G+GK+ + + + ++ D Y L +G + G Sbjct: 399 FILGTTGSGKSQFAKFEMEQLFLRRPNDEILIIDPEREYPPLAAELGATRVVISAGSQDC 458 Query: 538 FNPFANITD--------IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN 589 NP +++ V V+ N L ++ +A + + A Sbjct: 459 LNPLDLDKTTKREEGNPVNEKCTFVTSICEVLLGGNDGLSAAKRSIIDRAAQKIYRAY-- 516 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD 649 A + L EQ + P E+ L+ Y + G + + ++ Sbjct: 517 WADPTAMPPTLATL--YEQLRQEPEAD--AAEIATGLELYASGSAAGF---AQQTNVDRA 569 Query: 650 AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHK 708 ++ V ++ L L M ++ I R+ + + IDE L F N Sbjct: 570 NRVTVYDIADLS--KDLQTFGMMVVLEEIWARIVKNKAEGRRTWLYIDEFHLL--FANEY 625 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 + + Y+ R++ A ITQNI + +++ AR NS +L Q + + Sbjct: 626 AASYTQGIYKRVRKYGAAATGITQNIEELLANER---ARLMLSNSDGLFLLNQQSTDADA 682 Query: 769 YNQLYP 774 L Sbjct: 683 LTDLLK 688 >UniRef50_B7U591 Putative uncharacterized protein n=5 Tax=Bacillales RepID=B7U591_BACSU Length = 655 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 87/554 (15%), Positives = 189/554 (34%), Gaps = 69/554 (12%) Query: 300 PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY-AKWFPSVEKEAKEWGELRQRLGSG 358 I T+ + E++ K ++ N M+ ++ + A ++ + Sbjct: 77 NAITTVDVSTEERSKAITQVNKGIMEQNDRAHSEKNATSRIDAANTFHTLKDIYNEISQQ 136 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + I+ + ET + + +L + NGF + + + + Sbjct: 137 GEVLKLMQIRISVSGRTIKETE-DNLKAVLENLEGNGFHMTVLLNEQEYEWNS---LFSS 192 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNN 477 ++L + + +A +P P G L T + D+F Sbjct: 193 YSSQQKLPNKRAGKALPAATLAASLPFNFSKLDDPNGSYLGTTTTGGIVLFDLFHLSKTR 252 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGET 535 YN + GT GAGK+ ++ + + G + FD+ +K L + GG Y+ DG + Sbjct: 253 NYYNGVIVGTMGAGKSTALKKIGLDNILRGNYIRGFDVTGEFKPLIDLFGGRYISLDGSS 312 Query: 536 LRFNPFANI-TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQA-----------VRAS 583 N + T D + ++ +++ ++ ++ A ++ Sbjct: 313 GIINALQVLKTSADPDLTFLENEQQSFMKHLSKMNDFYKFIVPSATDQDLQEFSRMLKKL 372 Query: 584 WLAKE---------------NRARIDDVVDFLKNASDSEQYAE------SPTIRSRLDEM 622 + D ++F++ + + SPT RL+++ Sbjct: 373 YNKFGLTPDMKEGITQLSNDRYPIFSDFLEFVREELYEDFEKKLFREEISPTRTKRLEDI 432 Query: 623 IVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLIIYIEN 680 + L+ + YG+ FN ++V + L + A MF+ + I + Sbjct: 433 ELTLESIVED--YGRLFNGHSSIDDITNEQIVFFSIRSLVGMTKKVFNAQMFNALTLIWD 490 Query: 681 RMY--------------------RTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 M + + + L +IDE RL++ N +F R A Sbjct: 491 NMIQVGKPQYDGLYEDNGLTMEEKMKKIKRMLVIIDESHRLINANNELAVDFTTDFAREA 550 Query: 721 RRHTGAYITITQNIVDFDSDKASS----AARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 R++ G + +Q+I DF + + + + + + YK I+KQ + ++ Q Sbjct: 551 RKYFGGLLFASQSIRDFVPEGSKADVVGKIKTLFELTQYKFIMKQDSNTQKDLKNIFQGQ 610 Query: 777 FLPLQRDMIGKFGA 790 + I Sbjct: 611 LSESELSRIPTLEK 624 >UniRef50_O87213 TrsE protein (TraE) n=11 Tax=Lactobacillales RepID=O87213_9LACT Length = 672 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 103/650 (15%), Positives = 203/650 (31%), Gaps = 81/650 (12%) Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 +++ + K+ D + F + Y+ G + + Sbjct: 22 IVDEEQEQKKSKQDNFMESIDRDSLHSLFPFSWEQYPTYVQSGEN--------FMRTIAI 73 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 A P+ Y N L+ + + D +S ++ K Sbjct: 74 ADYPKR--------VYGNWLSELKRKKGSIDI---VQYIDSASNNSMITYYKKTIQNKEA 122 Query: 332 TSYAKWFPSVEKEAKEW-GELRQRLGS--GQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + P +K K + +L S+ Y + D+ ++ +++ Sbjct: 123 QLLNTFDPYKQKVLKNYIDSANMQLDKYLDNSTTFVYQHMLVYLRADSLAELDDLTENVR 182 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK--EAGVVQRAESFNVANLMPLV 446 N+ K + + P + F + +P K V F+ A ++ L Sbjct: 183 NTLIKLQMKPLIPVKATFQGFWSTMPINENLLGDYTYKESNTEVASSMFPFDDAEILDLK 242 Query: 447 ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 + + N + ID+ R N NM V GTSG GKT + I Sbjct: 243 PRSDIEGINKD----TNSIIAIDMLDR-NTTLNQNMVVIGTSGVGKTTYMIQKILRYAIQ 297 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDI---------------D 548 + D + Y + E++GG L + NP ++ Sbjct: 298 DYQIYIIDPENEYTRIVESLGGSVLHLTSNAKYKINPLQIFSEEILSADEAVTNLDELVK 357 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE-------------NRARIDD 595 +R++ V+ ++ +V + ++ V+ +++ + + Sbjct: 358 DKIQRLKGFFEVL---KDDMTQVEKAVMDNIVKNAYINSGILKYNRLNEIKNEQWPTLSN 414 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 V D L S+ + P + + +L YT F+ ++ D K+V Sbjct: 415 VYDELTKLSEKD-----PEKFKTIKDFYFILGSYTHGS--NTLFDG-ATNINLDTKIVSF 466 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEK 715 +L L+ + + Y+ + + + + KKL V DE L K+ F + Sbjct: 467 DLKPLQSEQEVQAGAYLNTFQYLWDEITKDRKKRKKLFV-DEFHFLTLHKSAST--FFHQ 523 Query: 716 GYRTARRHTGAYITITQNIVDF---DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 Y+ R++ I TQ I D +D + A GNS K+ K Sbjct: 524 AYKRFRKYNAGAIAGTQQIQDVIEGQTDSGQNIGEAIIGNSFTKVFFGLDGKGVDDITSK 583 Query: 773 YPDQFLPLQRDMIGKFGAAKD---QWFSSFLLQVENHSSWHRLFVDPLSR 819 F ++ ++ + + VE RL DP + Sbjct: 584 LRMNFSEKEKKLLERRRQGDALIIYGSQRAFMNVELTEEELRLI-DPEAY 632 >UniRef50_C2LLI5 Type IV secretory pathway, VirB4 component n=31 Tax=Enterobacteriaceae RepID=C2LLI5_PROMI Length = 955 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 141/930 (15%), Positives = 299/930 (32%), Gaps = 128/930 (13%) Query: 19 LKLPDESAKANEVLGEMSFPQFSRLLPYRDY-NQESGLFMNDT-TMGFMLEAIPIN---- 72 L P + +A+E + P F LP+ ++ ++E L ++D ++G + P Sbjct: 45 LSRPGKMTRADEQKIYHANPSFIDYLPWVEFLDEEQCLLLDDGVSVGAVYAVEPAPTEGR 104 Query: 73 ----------GANESIVEALDHMLRTKLPRGIPLCI---HLMSSQLVGDRIEYGLREFSW 119 +++ ++LD ++ + D I R ++ Sbjct: 105 SAGRLLEIRDAVEDALQDSLDEHDDNPWVVQFFCQDEDDVSVTLATLRDYILPAARGTAF 164 Query: 120 SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFI------SYCSPSKKKSR 173 + R + G R R+ + SY P + Sbjct: 165 TEAWLTEMARHLRGIARPEGLFKDTEVTGQPWRGQQRRTRMVVYRRLGNSYTDPMPPVAM 224 Query: 174 ADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPD-----SLYPKRRQL- 227 + + + +SL A + D + + N PD +LY + Sbjct: 225 -----LNQMCDRLVSSLGSAGVQCVRQDGRQVHQWLLRHFNPAPDWVDRETLYREGAYWP 279 Query: 228 -DPYSDLNYQCVEDSFD---LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN- 282 + ++D + + G+ + + L + P L Sbjct: 280 AAEEAPGTLPVLKDFAETLWFTPPRSDVENGVWWFDNLAHGVVNIEKLRKAPGPGHLTGE 339 Query: 283 ---MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP 339 N + L++ +L++T+V + Q E + L K S Sbjct: 340 QKRGDKNINALMDL---FPEGTMLSMTIVTQPQDTLEQE----FTRLGKNSVGE----NT 388 Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI 399 ++ ++ R L + + L++ + E + D+ + G E + Sbjct: 389 DSQRTRRDVETAR-GLLGHRHKLYRASLSLLLRAG-SVEELNKKRVDLTATLLNAGLEPV 446 Query: 400 SPRFNH--MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGL 456 P ++ + +L LP K+ + ++A L+P+ T G Sbjct: 447 KPEYDVAPLNGYLRALPMCFDPQTD---KKHWYTRLTWVQHLAGLLPVTGRTSGTGHPGW 503 Query: 457 LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDM 515 + D + N ++ + G +GAGK+ + + ++ + + Sbjct: 504 SFFNRGGGVLTFDPQNKQDRTQNAHLLLFGPTGAGKSATLCAQLSQLMAVRRPRLFIAEA 563 Query: 516 GDG-------YKSLCENMG--------GVY------------LDGETLRFNPFANITDID 548 G+ Y SL ++ GV +D + L N + + D Sbjct: 564 GNSFGLLADYYASLGLSVNKVSVKPGSGVRLPLFADAHQLLMMDEQRLALNA-DELPETD 622 Query: 549 QSAERV---RDQLSVMA------------SPNGNLDEVHEGLLLQAVRA---SWLAKENR 590 +E RD L M L ++ +A+ A + A + + Sbjct: 623 SESEDDDGQRDILGEMEISARMMITGGDVREEAELKRADRAMIRRALMAGARASYAADRQ 682 Query: 591 ARIDDVVDFLKNAS----DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 D+ + L S + E A +P R++ EM L +T G++ + L Sbjct: 683 MLPADLQEALYALSRGEGEEEGRALNPQRRAKAAEMAESLGMFTEPGSFEHELFNLPGEL 742 Query: 647 RDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLD 703 +A + +++LG L E + + M SLI I N R R V+DE + Sbjct: 743 WPEADVTLIDLGHLAREGYEAQMALTMVSLINSINNIAERDQYRARDINFVVDEAH--IV 800 Query: 704 FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 N + ++ K + R+ TQN+ D+ A + + + L Sbjct: 801 TVNPLLSPYVTKVVKMWRKLGAWLWLATQNLDDYPD-----CAEKMLNMAEWWVCLTMPQ 855 Query: 764 KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS 823 KE + Q+ ++ ++ ++ + R+ L A+ Sbjct: 856 KEVEAIARF--KTLSEEQKQVLLSAAKLSGC-YTEGVVLARKVEALFRVVQPSLYLALGM 912 Query: 824 SDGPDFEFVQQKRKE-GLSIHEAVWQLAWK 852 ++ + + + ++ G S EA +++A + Sbjct: 913 TEKEEKQQRRVLMEQYGCSELEAAFRVADE 942 >UniRef50_Q2YIT8 Type IV secretion system protein virB4 n=43 Tax=root RepID=VIRB4_BRUA2 Length = 831 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 103/581 (17%), Positives = 190/581 (32%), Gaps = 72/581 (12%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 +LN + +++T + + + L+ S + E Sbjct: 264 GILNGLMYSDYEYVITQSFSFMTKRDGKEFLTRQKQRLQNTEDGS--------ASQIMEM 315 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 +LG G + Y ++ F +D ET +N + NGF Sbjct: 316 DIAIDQLGRGDFVMGEYHYSLLVFAED-METVRHNTSHAMNILQDNGFLATVIATATDAA 374 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD----NPLTPAGLLAPTYRNQ 464 F LP ++ + ++ A NP A L T Q Sbjct: 375 FYAQLPCN-----WRYRPRVAGLTSLNFAGLSCFHNFRAGKRDGNPWGQALTLLKTPSGQ 429 Query: 465 LAFIDIFFRGMNNTNY------NMAVCGTSGAGKTGLIQPLIRSVLDS------GGFAVV 512 A+++ + + N+ N + G SGAGKT L+ + G V Sbjct: 430 PAYLNFHYSKGDEDNFDKKLLGNTRIIGQSGAGKTVLMNFCLAQAQKYLHNAPMGMCNVF 489 Query: 513 FDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-L 568 FD G K +GG YL +GE FNPF + + + V+ S +G + Sbjct: 490 FDKDQGAKGTILAIGGKYLAIRNGEPTGFNPFQMEP-TAGNILFLEKLVQVLVSRDGQHV 548 Query: 569 DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 E + A+R + R+ V+ + SD + R + + L + Sbjct: 549 TTTDESRISHAIRTVMRMRPELRRLSTVLQNVTEGSDR---------QDRENSVAKRLAK 599 Query: 629 YT------ANGTYGQYFNSDEPSLRDDAKMV-VLELGGLEDRPSLLVAVMFSLIIYIENR 681 + GT+ + + + + + D + + L+ +R Sbjct: 600 WCFDDGTGKRGTFWWVLDCPQDQIDFNTHSNYGFDGTDFLDNADVRTPISMYLL----HR 655 Query: 682 MYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDK 741 M + + +DE W+ +D + EF T R+ G + TQ + Sbjct: 656 MELAIDGRRFIYWMDEAWKWVD--DEAFSEFANNKQLTIRKQNGLGVFATQMPSSLLN-- 711 Query: 742 ASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP--DQFLPLQRDMIGKFGAAKDQWFSSF 799 S A A + +I L ++ +Y + ++ + R M + F Sbjct: 712 -SKVASALVQQVATEIYLPNPKADYHEYTDGFKVTNEEFDIIRSM--------SEESRMF 762 Query: 800 LLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKE 838 L++ +HS RL ++ A+ S + E + Q E Sbjct: 763 LVKQGHHSMICRLELNGFDDELAILSGSSDNNELLDQVIAE 803 >UniRef50_Q4UW68 VirB4 protein n=7 Tax=Xanthomonadaceae RepID=Q4UW68_XANC8 Length = 817 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 99/522 (18%), Positives = 172/522 (32%), Gaps = 62/522 (11%) Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP 401 + ++ + SG + Y + + D+ E GF Sbjct: 297 SSQIRDLDLAMDDVASGNFVLGEYHFTVAVYS-DSQEKLARQIATTRAELSNAGFVSSKE 355 Query: 402 RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL-------VADNPLTPA 454 +F + LP + + S N L PL +NP A Sbjct: 356 DLAIASSFYSQLPGNW--------RFRTRIANLSSLNFLGLSPLHNFAQGKQHNNPWGDA 407 Query: 455 GLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 T Q + + + N V G SG GKT LI L+ V Sbjct: 408 VTTLQTTNGQPYYFNFHATHPAENSLGEKAIGNTMVIGKSGTGKTALINFLLSQVQKFDP 467 Query: 509 --FAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMAS 563 FD G + GG YL +G FNPF ++ + + + + + + V+ Sbjct: 468 VPTIFFFDKDRGAEIFVRACGGNYLALENGSPTGFNPFQCESN-EVNTQFLAELIKVL-G 525 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 E + +AV + + + L N D YA Sbjct: 526 GKTEYSSREEEDIYRAVGGMLDTPMHLRSMSNFRKSLPNMGDDGLYA------------- 572 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDD-AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM 682 L ++TA + G F++ ++ A ++ + + D + V V+ L+ +E + Sbjct: 573 -RLRRWTAGNSLGWVFDNPVDTIDLTRASIIGFDYTDVIDNVEVRVPVINYLLHRLEALI 631 Query: 683 YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 + V+DE W++LD + + EF + +T R+ G I TQ+ D A Sbjct: 632 ----DGRPLIYVMDEFWKILDGE-GGLKEFAKNKQKTIRKQNGLGIFATQSPED---ALA 683 Query: 743 SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQ 802 S A A ++ ++L Y Q + D+ FL++ Sbjct: 684 SDIAAALIEQTATMVLLPNPNASRDDYIDGLKLTDAEYQ------VVVSLDERSRCFLVK 737 Query: 803 VENHSSWHRLFV----DPLSRAMYSSDGPDFEFVQQKRKEGL 840 + S+ +L + D LS S+D + RK G Sbjct: 738 QGHASAVCQLNLRGMDDALSVISSSTDNIEIMHQILSRKAGK 779 >UniRef50_Q1GN15 VirB4 protein n=18 Tax=Alphaproteobacteria RepID=Q1GN15_SILST Length = 791 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 120/765 (15%), Positives = 251/765 (32%), Gaps = 99/765 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGA-----NESIVEALDHMLRTKLPR- 92 + + +LPY + + T + + + I +G +++ ++ + + + + Sbjct: 26 RLAHMLPYVSLVDDQTV---RTRVNELFQCIRFDGVNSYTTDDTYLDKVTALFARIIAQL 82 Query: 93 GIPLCIHLMS-SQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL----PE 147 G ++ S+ + ++ +R+ S++GE + ++ + P Sbjct: 83 GPEFSYYVHKVSKAIKPDLDP-IRKDSFAGEVDRLWRKKLETSGLRDKTLTLTIIHRPPP 141 Query: 148 GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ--AF 205 LP R S + KK + + + V + + L + + + A+ Sbjct: 142 KSVLPFLNR------SAPNRLKKATEKRLRRLGEAVNVFLSGLS--ELNPRILSAETGEL 193 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 I +G + LYP + Y L++ + + + D+ L G Sbjct: 194 IGFLGALNTGQELPLYPA----NTYGFLSFNA--ANTRVTFQGDHFELSEGVVGH----- 242 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 R + + ++ S + L++ I+T + + + Sbjct: 243 -------RYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQ 295 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 ++ + + + L + + S + + +T FC D + + Sbjct: 296 MQASQDAALSLM--------EALDIAADDLEAKRQSFGEHHMVVTIFC-DTLDELQTLSA 346 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 +I+N+ G ++I R ++L+ P K + + N A+ Sbjct: 347 EIVNAAAAEGVKMIGERVAAKAHYLSQHPGNQPKRV--------RASAITNRNFADFAAF 398 Query: 446 VADNPLTPAGL--------LAPTYRNQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTG 494 PAG PT +G T+ + + G G+GK+ Sbjct: 399 HRTQLGKPAGKTPWGKVITYLPTPEQSAYRFSYHEQGSPEKEPTSGHTLIMGRPGSGKSV 458 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSA 551 L L+ +G VFD G + GG Y G+ NP TD + Sbjct: 459 LSAFLMTQARRAGARIFVFDYRLGMEMAVRANGGRYASLKAGQPTGLNPLWTETD-ARGT 517 Query: 552 ERVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYA 610 + D L+ + + L + + VR +A + ++ +A Sbjct: 518 AWLSDWLATLLYRADKPLTPAQTNRIQEVVRQ-----NAQATNPALRNW-------RDFA 565 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD-EPSLRDDAKMVVLELGGLEDR--PSLL 667 ++ L ++T G YG F E + + +V +L G+ D Sbjct: 566 SLFVSTDDGGDLHQRLLEWTEEGRYGWIFGQTLEDTFSLEGDVVGFDLTGILDSEAEKER 625 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 +AV+ L +E + + VIDE W+ LD N E + TAR+ Sbjct: 626 MAVLSYLFRRVEREI---EDRRPTIIVIDEAWKALD--NAYFAERLSNWLVTARKQNTVA 680 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + +TQ + + + +I+L A Y L Sbjct: 681 VMMTQYASQL---ERTRTGKTIVEAVPTQILLPNIRAHAADYAML 722 >UniRef50_Q4QPC7 Putative uncharacterized protein n=12 Tax=Gammaproteobacteria RepID=Q4QPC7_HAEI8 Length = 956 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 137/899 (15%), Positives = 291/899 (32%), Gaps = 117/899 (13%) Query: 38 PQFSRLLPYRDYNQESG--LFMNDTTMGFMLEAIPIN--GANESIVEALDHMLRTKLPRG 93 P F LPY +Y +E G LF + + G + + PI G + + + +++ L Sbjct: 73 PSFISNLPYAEYLEEEGVMLFDDAKSAGAVFDIKPIGTEGRSSDYLNRVRTLVKDALQDS 132 Query: 94 I--------PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITR------AYYMKAA 139 + + + + +E LR++ + + T ++KA Sbjct: 133 FDELDTNPYVVQFYCQDDKDLSGYVE-NLRQYIKTTSPEASGSEFTEQWLGEMERHLKAV 191 Query: 140 ATQFPLPEGMNLPLT-----LRHYRVFISYCSPSKKKSRADILEMENLV-KIIRASLQGA 193 L + T +R R+ I + D +E N ++++ A Sbjct: 192 GKPGGLFVDDRVTNTAWAGKVRKTRMVI---YRYAGNNETDTIEKLNTACDRVQSAFITA 248 Query: 194 SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNY---------QCVEDSFDL 244 +T + + + E N NP + Y L+ Q + S +L Sbjct: 249 GLTMERQNETQIHRWLLEWFNPNPSRYFNGLDDKACYDLLSLSKDESALPLQDQDFSENL 308 Query: 245 KVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN---MADNYSNLLNPELSISCPF 301 G I+ ++ + P++ + N + L + + Sbjct: 309 FFTPPESKNGYWYFNEQPHEVIVVDNIRKQPDVGHMTGEVTRGRNINALFDL---LPEST 365 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 I+ +T+V+ Q K + + + S ++ + + L G Sbjct: 366 IMAITVVIHPQDKLQAHLDKLSSRAVGNNYESI--------YLKQDALTVTEYLKDGHKL 417 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP--RFNHMRNFLTCLPFMAGK 419 + + +++ +++ N + + ++L LP Sbjct: 418 YQAG--MVFYVRGKDDQELRIRSRELRTVLLSNNLVPVKEGNEVAPLNSYLRWLPMNFNP 475 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNT 478 L K + ++AN++P+ T G+ D Sbjct: 476 QL--DAKSRFYTKYYWVQHIANMLPVFGRETGTGHPGITYFNRGGSPLDFDPLNPKDRTK 533 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGETLR 537 N + + G +G+GK+ + + ++ + + G+ + + L + Sbjct: 534 NAHKLILGPTGSGKSATLTAQMAQLMAVHRPRLFIVEAGNSFGLFSDYAERYGLTVNRVS 593 Query: 538 FNPFANIT-------------DIDQSAERV----------RDQLSVM------------A 562 P +NI DID + RD L+ M A Sbjct: 594 LEPSSNIALPLFSEAHRLLEMDIDLEVQDDDDNEDEGEEQRDLLAEMELTARLMITGGEA 653 Query: 563 SPNGNLDEVHEGLLLQAV-----RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 + + + QA+ + S + DV L+ S + P S Sbjct: 654 KEDEKMSRADRSAIRQAILLAAEKTSQETPPRQVLTGDVKAALEELSRRQDIR--PERAS 711 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR--PSLLVAVMFSLI 675 RL +M +D + G G++FN E + +A + +++L + L SLI Sbjct: 712 RLADMAEAMDIFCT-GVNGRFFN-REGEIWPEADITLVDLAMFARDGYEAELAISYISLI 769 Query: 676 IYIENRMYRTPRN-LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 +I + + + +N+ DE + N + +F+ KG + R+ TQN+ Sbjct: 770 NHINSLGEKYQHSFRPIVNITDESH--IITVNPLLAKFLVKGSKMWRKLGIWLWLATQNM 827 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 DF + + +L S E + N+ + Q+ M+ A D+ Sbjct: 828 ADFPDES-----DKLLSMVEWWELLNLSNDEVEQVNRFR--RLSEAQKMMLLSAKKA-DK 879 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEG-LSIHEAVWQLAWK 852 ++ ++ N + R+ L A+ ++ + +Q E + +A +A Sbjct: 880 KYTEGVVLATNMEALFRVVPPSLYLALGMTEKHEKAQRKQLMMEHNCTELDAALMVAKD 938 >UniRef50_B8I092 Putative uncharacterized protein n=4 Tax=Clostridiaceae RepID=B8I092_CLOCE Length = 610 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 93/550 (16%), Positives = 197/550 (35%), Gaps = 70/550 (12%) Query: 269 FHLARNP---EIAFLWNMADNYSNLLNPELSISCPFILTLTLV----VEDQVKTHSEANL 321 + + + P + +L + + S + + +T T V + + + Sbjct: 41 YGIVKYPQSADYGWLSKLTNIPSTVAS----------ITFTPVDDSVFLESLSNTIKQKR 90 Query: 322 KYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 + K + T+ ++ A + ++ ++ + + L + +D + Sbjct: 91 GECESAKDALTASR-----AKRAADDAEKMMIQVDQHGEKIGAMSLLVAPLTRDE-KLLK 144 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 +V Q + ++ + +F PF A +++ + SF Sbjct: 145 KVCQKVESAIAVAKCKGRVLSSLQKESFKQLSPFYASNEQIERI--TQRILPLSSF--IG 200 Query: 442 LMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI 500 P + G LA L +D + RG + TN M + G G GK+ I+ +I Sbjct: 201 GFPFASSGLNDGQGYYLAKDASGGLVVVDPWMRGGDRTNSCMTIMGVGGVGKSTAIKHII 260 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN----ITDIDQSAER 553 + G ++ D YK L N+ G +L+ G R NP D D+ ER Sbjct: 261 MAEYMRGTKIIIIDPESEYKELTRNLQGDWLNCGGGIKGRLNPLQIRQVPKDDEDEDGER 320 Query: 554 VR----DQLSVMASPNGNLD-----------EVHEGLLLQAVRASW-------------L 585 + + + +A +L+ + H L+ + + L Sbjct: 321 LYEDEGNGMGALALHMKSLEIFFKLYKPSFNDKHMALIKICLIEMYEKFGITWDTDVTNL 380 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 E+ D+ + ++ E P I++ ++ +LL G+ +N S Sbjct: 381 KNEDYPIFTDLNEIIEEKKSKE---TEPNIKALYVDISLLLHD-LIFGSDQFLWNG-HTS 435 Query: 646 LRDDAKMVVLELGGLEDRPS-LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF 704 + + V L+ L+D + F+++ + +M R R + L + DE + ++D Sbjct: 436 IDTKTRCVCLDTHDLQDTSDNIKSTQYFTILQWAWEQMTR-DREERVLLISDEAYLMIDH 494 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 + + F+ + AR++ A I+ ++VDF +A KI++ K Sbjct: 495 RVPQSLIFLRNAVKRARKYEAAIAIISHSVVDFLDPSVKMYGQALLDIPCIKILMGTDGK 554 Query: 765 EFAKYNQLYP 774 + +LY Sbjct: 555 NLQETKELYK 564 >UniRef50_C8S1Y9 CagE TrbE VirB component of type IV transporter system n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Y9_9RHOB Length = 780 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 89/473 (18%), Positives = 162/473 (34%), Gaps = 34/473 (7%) Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPS---VEKEAKEWGELRQRLGSGQSSVVSYFL 367 D + THS ++ + ++ K A+ S + E + SG+ + + Sbjct: 263 DTIITHSYTPIERGSITERVKRRVAQMRASEDIAATIEAQLFEAADKSESGELGFGIHQM 322 Query: 368 NITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 IT F D EV + I +NG L+ F P Sbjct: 323 TITVFAGDQAALDTEVAR-IRGIAHQNGMRLVREVTALEAAFFAMHPGNMDYRARDMTVS 381 Query: 428 AGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNN---TNYNMAV 484 + + + A+ + P L T + L G TN + V Sbjct: 382 SLNFADMAALHAADTGTEASRLPWQTPLTLFQTLQGSLHRFSFHEPGDPLAEPTNGHTLV 441 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPF 541 G SG GKT + L +GG ++FD G K +GG Y + G NP Sbjct: 442 LGKSGGGKTTTVAFLAAQAQRAGGRTIIFDKEAGLKMAVRALGGRYAEIRAGRPTGLNPL 501 Query: 542 ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 A + A + ++++ +G + + L A+ + A+E + Sbjct: 502 ATESGERGEAWFLDWLVALLEQRSGPMTPLQSEALKSAISQNGKAREGLRNFRAFQELFG 561 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF-NSDEPSLRDDA-KMVVLELGG 659 + D ++ + ++ G YG F + EP + + + ++L Sbjct: 562 DVGDGL-------------DLAQRISEWGPEGRYGWVFGEASEPVVDFTSHDVTAVDLTE 608 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 + D + A++ L IE + L +IDE W++LD + + + + T Sbjct: 609 ILDLGTERTAILGYLFRRIEMLI---EEKRPTLILIDEAWKVLD--DEYFAKKLAEWLVT 663 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 AR+ + +TQ F S S AR+ +++ A Y+ Sbjct: 664 ARKKNVVVVMMTQ----FPSQIRGSKARSILEALPNQLLFPNGEAASADYDGF 712 >UniRef50_Q97HG4 Conjugative transfer gene TrsE homolog, ATPase n=1 Tax=Clostridium acetobutylicum RepID=Q97HG4_CLOAB Length = 617 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 94/596 (15%), Positives = 188/596 (31%), Gaps = 71/596 (11%) Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 + D + G + + P + LN + I T Sbjct: 29 ITPDGIVEGKDYIYLGPGRYARVYAIIGFPRNMTI--------GYLNELFQMGDIDITTY 80 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP---SVEKEAKEWGELRQRLGSGQSSV 362 + D + KY + ++ A++ E R ++ + + Sbjct: 81 VENIPD-SAVIRKLTGKYSQYMSNINLQLKHGYSMDYGMKLAAEDLDETRAQIQTNTERM 139 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + + K N + + + + ++ FLT +P + Sbjct: 140 FYVQPIVVLWGK-NLSALDDKAEMFDTICARKSLISKCLVGDQLKGFLTGVPNL------ 192 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQLAFIDIFFRGMNNTNY 480 ++ + + +VA L+P+ G+ + + F TN Sbjct: 193 -NIEYTSGFRNMITGSVACLIPVGNTELCHKNGIFYGENMFTKSPIVYNEFIGAPTLTNP 251 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLR 537 + V GT+GAGK+ ++ +G + V+ D + Y+ L E +GG Y+ G Sbjct: 252 HTFVSGTTGAGKSVFLKLKAARSAAAGRWTVILDPQEEYQPLIEKLGGQYIQLRPGVKSG 311 Query: 538 FNPFANIT----------DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 NPF DI + + +S+ + N + + + AV Sbjct: 312 INPFEIEVEEDENEKKKIDIYGKRSEIIEMISIFSEKFRNGNPLQGEEIT-AVDECTAQL 370 Query: 588 ENRARIDDVVDFLKNASDSEQY---------AESPTIRSR---------------LDEMI 623 I + L E+ + PT+ + E+I Sbjct: 371 YENLGITEDPKSLYEEKTYEKEGKFYTGNIKKDLPTLSDLRNALIEKNKEIKSDGVKELI 430 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 ++ T +G + + ++ D+K++ + L D + A M + + +I Sbjct: 431 EVMKMITGDGPMAMFDC--KSTISFDSKIIAISYKHLNDEFTKFYA-MINSLSWIWTTFS 487 Query: 684 RTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 ++++K ++DEG F + F+E R R+ A TQ + DF Sbjct: 488 NYKYKDIEKEVIVDEGHLFAKF--ERSLHFLELIARLGRKLKIALTLATQFMQDFIG--- 542 Query: 743 SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 S A KI+LKQ A K + ++ F + + S Sbjct: 543 SKQTEAIIHLCGTKILLKQEASVAKKVCEFL--GLSSRCEQLMTTFISGQAILLSE 596 >UniRef50_C8WNM7 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNM7_EGGLE Length = 1043 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 111/725 (15%), Positives = 238/725 (32%), Gaps = 75/725 (10%) Query: 132 RAYYMKAAATQFPLPEGMNLPLTLRHYRVFI-SYCSPSKKKSRADILEMENLVKIIRASL 190 + Q + + R+FI + +P+ +++ + + SL Sbjct: 351 AGNRFRRDINQIIESKVAETQQNVERRRLFIVTVEAPTCEQASPLLARATE---QVMRSL 407 Query: 191 QGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 + + ++ V + I+ + N + L + ++ + D Sbjct: 408 KNMGVNSEEVRGNELLRIIDSITNPRDPRGFVSFEDLKVTDERGVSAIQLGYT---TKDL 464 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 + ++ + S++++ + ++TL + Sbjct: 465 VAPADLTKIDDTHISWNGVTGQALYLQKW---AGSVRSDMISSLAELPINQVITLDMTSW 521 Query: 311 DQVKTHSEANLKYMDLE--------KKSKTSY--AKWFPS-VEKEAKEWGELRQRLGSGQ 359 +Q + DL+ K S+T Y + P+ ++ + +LR L S Sbjct: 522 EQSRAIETIESMNTDLKVQKSDYVLKHSQTMYITDEMLPTNLQDAMENARDLRDDLVSRD 581 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 + S + D+ E E I + FR+ + + F LP Sbjct: 582 QKMWSLTCTTMTWA-DSLEDCDENSGAIQDVFRRFTCRAVPLVKLQRQGFAAMLPTG--- 637 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN 479 + V+ + +A L+P + + G+ + FI F+ + Sbjct: 638 -----RCDIPYVRNLTTAPLAALVPFTSVELMERGGMWMGQNQTSKNFI--FYNRRDAVA 690 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVL--DSGGFAVVFDMGDGYKSLCENMGGVYLD---GE 534 N + G G GK+ + I L D +V D Y ++ M G + Sbjct: 691 PNGFILGKPGRGKSVTAKNTILWTLLTDPTAEVIVLDPEREYINVAREMDGEVVQISGDS 750 Query: 535 TLRFNPFAN-ITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWL------A 586 NPF + + +Q D + M NL + + L+ + V + Sbjct: 751 HTYINPFDLELVEGEQPLAMKVDAIMSMVEMMAKNLSPMQKTLVDRCVSRIYDRYFATHD 810 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 + + + D + L + E + V +++Y FN ++ Sbjct: 811 QRDIPTLIDFYNMLNQQPEPEGRM-----------LAVTIERYVTG--QASLFN-HPTNV 856 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFK 705 + VV ++ D + + L+ NR+ R R+++ IDE L F+ Sbjct: 857 NTHKRFVVYDIRDCADN--MKGLALLILLDQTWNRIVRNRERHVRTWVFIDE--MQLLFE 912 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 N + ++ + +R++ ITQNI +++ S NS + ++L QSA + Sbjct: 913 NDYAISYFDQLWTRSRKYGAIPTGITQNIERIINNEKSRL---MLANSDFLVLLGQSASD 969 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW-HRLFVDPLSRAMYSS 824 A ++ + Q M+ G + L+ + +R+ D M ++ Sbjct: 970 AAALGEVI--KLSERQVAMMRNAGPGEG-----LLVAGGKIIPFENRIPTDSAIYRMVTT 1022 Query: 825 DGPDF 829 D Sbjct: 1023 KLDDL 1027 >UniRef50_A0AXD0 Type IV secretion/conjugal transfer ATPase, VirB4 family n=13 Tax=root RepID=A0AXD0_BURCH Length = 826 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 94/541 (17%), Positives = 165/541 (30%), Gaps = 64/541 (11%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 +LN L +I T + V D+ + L + A + + Sbjct: 263 GMLNGLLYGDFEYIETQSFTVLDRPSAKEALERQRNQLI--AGDDVAV------SQIEAM 314 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 + L +G + Y + D + + GF+ Sbjct: 315 DQAANDLVNGDFVLGEYHYTLAVL-GDTLDEVVRHVAQARTKLADAGFQSALIDLVADAA 373 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTY 461 + P + S N + L NP A + T Sbjct: 374 WFAQCPGNWRY--------RPREAKLTSRNFCAMASLHNFATGKREGNPWGEAITIVKTP 425 Query: 462 RNQLAFIDIF------FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM 515 Q +++ N + G +GAGKT L L+ + G V+FD Sbjct: 426 SGQPLYLNFHATPEKVDSNDEKALANTQIIGRAGAGKTVLELFLLAMAMKYGVMGVLFDK 485 Query: 516 GDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVH 572 G + MGG Y GE NPF D + +R + + L Sbjct: 486 DRGAEIGIRAMGGQYTVFHRGEPTGMNPFQLEADEATHSFWMR-LVCKLVDNGVPLSAKD 544 Query: 573 EGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTAN 632 E + +A+R + R+ V L N D+ +A L ++ A Sbjct: 545 ELDISRAIREVARMDRSLRRLSMVRQLLPNVGDNSLHA--------------RLAKWCAG 590 Query: 633 GTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK 691 G G ++ + DA ++ + L D P + + L+ E + + Sbjct: 591 GRLGWVLDNPVDRIDLDAHRLFGFDDTELLDDPEVCAPLTMVLLHLTERLI----DGRRF 646 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG 751 + V+ E W+ L ++ EF +T R+ G I TQ+ D S S +RA Sbjct: 647 IYVMTEFWKRL--RDPVFSEFANDKQKTIRKQNGLGIFDTQSPADVLS---SPISRALVE 701 Query: 752 NSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHR 811 ++ L + + Y + + FL++ + S+ R Sbjct: 702 QTATFFFLPNPSADHDDYVHGFKLTEAEF------NIVRRMGEHSRLFLVKQGHRSAIGR 755 Query: 812 L 812 L Sbjct: 756 L 756 >UniRef50_D0SZZ9 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZZ9_ACILW Length = 829 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 117/801 (14%), Positives = 255/801 (31%), Gaps = 122/801 (15%) Query: 104 QLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR------- 156 + R+ L F IT YY FP P + R Sbjct: 56 NYITARVNAALSRFGDGWVTWHDAARITDNYYPNNEDNFFPDPISRLIDQQRRLKFQKEG 115 Query: 157 -----HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 Y + ISY P+K S+ + E+ + + + + + F D++ Sbjct: 116 NHFVTEYVLVISYLPPNKTSSKLSSMVWEDSQESEKKNSEEIILDYFEKQLSIFEDLIAN 175 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILN--- 268 + + Y + + + V ++L + +G + N Sbjct: 176 AVQLQRMNSYTYTDDF--GKTHTRDQLVNYLEFCVTGNFLEKNIPPHGAYLDTFVGNHLL 233 Query: 269 ---------------FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 + P ++Y N+L ++ + + ++ D Sbjct: 234 VTGDTPKIDDNFMCLVTIEGYP--------PESYPNILAVLETLPLVYRWSNRMIYLDHQ 285 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRL-------GSGQSSVVSYF 366 E +K + ++ K + ++ + SG S + Sbjct: 286 TAIKELRSVEKKWRQKVRGFISQTLKMEGKINHDALDMAEHASAAVRDAESGLVSYGYFT 345 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 + F K N + E + ++ ++ GF N + +++ +P A + + L Sbjct: 346 STVVIFGK-NLKNLHEDARAVVREIQRLGFTCRIENINSLESWIGTIPGHADANIRRPL- 403 Query: 427 EAGVVQRAESFNVANLMPLVADN------------PLTPAGLLAPTYRNQLAFIDIFFRG 474 + N A+L+PL + P +P L T +++ Sbjct: 404 -------IHTLNQADLIPLSSVWAGRPENPCPYFPPNSPPLLYGATSGATPFRLNLHIDD 456 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVL-DSGGFAVVFDMGDGYKSLCENMGGVYL-- 531 + +T + G +G+GK+ L+ L L FD G+ + GG++ Sbjct: 457 VGHT----LIIGPTGSGKSVLLNTLAVQFLRYPNARVFAFDKGNSMWATSLACGGIHYDI 512 Query: 532 -----DGETLRFNPFANITDIDQSAERVRDQLSVMAS--PNGNLDEVHEGLLLQAVRASW 584 D + LRF P I D D D LS L +L +A+ Sbjct: 513 GGDLGDAKDLRFAPLQYI-DSDSDFAWALDWLSTCYELQAKKPLTPAQRQMLTKAL---- 567 Query: 585 LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 A + + ++ S+ ++ ++ LD Y + G + E Sbjct: 568 -ASFRDSTVVGQRGLVEFISEIQEV-----------DIRSALDPYASTAA-GGILSGIED 614 Query: 645 SLRDDAK-MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLD 703 +L +A V E+ L + + + +++Y+ R+ ++ + +DE W +L Sbjct: 615 NLNVNAGWWTVFEIENLMEMGEVN---LLPVLLYLFRRIEKSLDGRPTILSLDEAWLMLG 671 Query: 704 FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 + I + + R+ + + TQ++ D + S N KI+L + Sbjct: 672 H--PTFRDKIREWLKVLRKANCSVVMATQSLTDALN---SGIFDVLVENCLTKILLPNAE 726 Query: 764 KEFAKYNQ-------LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP 816 + ++ ++ ++I +D ++ L +D Sbjct: 727 ADKEGTDKVPGPLDLYKAIGLNDVEINIIKNSTRKRDYYY-----LSSEGKRLFTLSLDD 781 Query: 817 LSRAMYSSDGPDFE-FVQQKR 836 ++ A +++ D +++ Sbjct: 782 IALAFVAANYKDNNKEMRELM 802 >UniRef50_A6UMV4 Type IV secretion/conjugal transfer ATPase, VirB4 family n=4 Tax=Rhizobiales RepID=A6UMV4_SINMW Length = 819 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 94/565 (16%), Positives = 176/565 (31%), Gaps = 62/565 (10%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANL--KYMDLEKKSKTSYAKWFPSVEKEAK 346 +L+ L ++ FILT + + D+ + + + +S +S + Sbjct: 283 GMLDGLLQVNHEFILTQSFTIADKPIAQERISRLQRQIRASDESGSSVE----------Q 332 Query: 347 EWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 + L + ++ + L++ +D ++ + N Sbjct: 333 DIDYALNSLMNQEAVFGFHHLSLLCLSRDLP-GLSRTVSELGACLTDMNLTWLREDLNLE 391 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLA 466 F LP K + + S + N AD + +Q Sbjct: 392 AGFWAQLPGNHSYIARKAMLSSANFSGLSSMH--NFATGQADRTHWGLPITILETTSQTP 449 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL--DSGGFAVVFDMGDGYKSLCE 524 + +F + V G +G+GKT + L+ + AV FD G + Sbjct: 450 Y---WFNFHRRDIGHFLVTGPTGSGKTVALTFLLAQAMRVSPTPKAVFFDKDRGAEIFVR 506 Query: 525 NMGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMASP--NGNLDEVHEGLLLQA 579 +GG Y G FNP + + + E + L M G+ + E L +A Sbjct: 507 AIGGSYEVLSPGTPTGFNPLQ-LENTGPNREFLLRLLKAMLRSGDRGDFTQEDEDTLERA 565 Query: 580 VRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 + + ++ L S R+ +++ L + G F Sbjct: 566 IVRLMQEPAAERNLANLAALLVGRS-----------RADANDLHSRLRPWI-EGEKAWLF 613 Query: 640 NSDEPSLRDDAKMV-VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 N+ L + V ++ + L + L ++ + + +DEG Sbjct: 614 NAQHDVLSFSGRSVFGFDMTNILGNEDLRTPALMYLYHRLDELL----DGNPVMFFMDEG 669 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W+LL + FI +T R+ G TQ+ D KAS S+ I Sbjct: 670 WQLLM--DETFSAFIVDKMKTIRKLNGIVGFGTQSAADIAKAKASHT---LIEQSATNIH 724 Query: 759 L---KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 + + + K L +F I K FL++ N S RL + Sbjct: 725 FPNPRADEESYIKRFGLTVKEFN-----FIKNTPPEKRT----FLIKHGNDSVIARLDLS 775 Query: 816 --PLSRAMYSSDGPDFEFVQQKRKE 838 P + S E R++ Sbjct: 776 AMPDLVKVLSGRKETVEECAALREQ 800 >UniRef50_D1PRT5 TRSE protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT5_9FIRM Length = 779 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 107/641 (16%), Positives = 216/641 (33%), Gaps = 81/641 (12%) Query: 164 YCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPK 223 S K + + + + L T ++VD + I+ +S + Sbjct: 137 IVSTQKNRVEDARDRLRQVQGHLVNILSELGSTVRSVDNSERLRILHNFFRVGEESRF-- 194 Query: 224 RRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNM 283 + + + F V D + + + + R+ Sbjct: 195 -----EFDLDRCTKLGEDFRDFVAPDVIEF--KRDHIDIDNRVAKCMSMSY--------F 239 Query: 284 ADNYSNLLNPELSISCPFILT----LTLVVEDQVKTHSEANLKY----MDLEKKSKTSYA 335 + L L P+I+ + + ED KT ++ +K + +KS + Sbjct: 240 PQRIDDKLVTTLLQQVPYIILTMDFVPIETEDAYKTLADYRMKVDADKVRFNRKSVDN-L 298 Query: 336 KWFPSVEKEAKEWGELRQRLGSG-QSSVVSYFLNI--TAFCKDNNETALEVEQDILNSFR 392 + +V + +E + + FL + A+ D+ E + + + Sbjct: 299 DFTANVPQRTQEEENTLNQWQRDMTDNDQQMFLTLLTVAYFADDLEELRQETDALKTAAG 358 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 R+ F T +P+ L+ ++ + VA+L+P L Sbjct: 359 NYNCRFTEMRWQQENAFNTAMPYG--------LRRIANLRAMTTKGVASLIPFNTQEVLV 410 Query: 453 PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR--SVLDSGGFA 510 P G+ N ++ I N N V TSG GK+ ++ I + Sbjct: 411 PGGIYYGV--NAISGNIIIGLRTVLINGNAMVIATSGGGKSLFVKQEILELFLRFLKAKF 468 Query: 511 VVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMAS---- 563 + D + Y L +GG+ +D T FNP D + + + S Sbjct: 469 YIVDPENEYGPLVRELGGIVVDIAVDSTTYFNPLDFTYDPSTKIQPHTAKAEFVLSLCEQ 528 Query: 564 --PNGNLDEVHEGLLLQAVRASWLA------KENRARIDDVVDFLKNASDSEQYAESPTI 615 N+ + L+ ++++ + K + D+ + LK Sbjct: 529 IMGKDNIQAGDKSLIDRSLKHIYKPLIKSGYKIACPTLTDLYNDLKEQP----------- 577 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLI 675 R E+ + L+ + A G+ + + ++ +++ + L D L M S++ Sbjct: 578 HERAHEIALALELF-ATGSMNMF--AHPTNVDMSNRLICFNIQSLGD--QLKPVAMLSML 632 Query: 676 IYIENRMYRTPRNLKKL---NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 YI + RN K DE + LL ++ +F+ ++ R++ ITQ Sbjct: 633 EYINTCVMSNERNDPKAATWVYFDEIYLLL--RDKLSSQFLYTSWKRFRKYNAYATGITQ 690 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 N+ D S+ A A NS + +L+Q+ K+ +LY Sbjct: 691 NVQDCLSN---DTAYAMLANSEFVCMLRQT-KDIDSVVELY 727 >UniRef50_A3EW09 Probable conjugal transfer protein (TrbE) n=4 Tax=Leptospirillum RepID=A3EW09_9BACT Length = 812 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 127/841 (15%), Positives = 238/841 (28%), Gaps = 111/841 (13%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANES---------IVEALDHMLRT 88 P LL + G+ N G +L A +G + ++ Sbjct: 14 PGLESLLNWESLVA-PGVLRNKD--GSLLSAFEFSGPDLESSSSEELAATSARINAAFS- 69 Query: 89 KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEG 148 KL G + I L+ + E + + +ER A + + Sbjct: 70 KLGSGWMIHIDLLRLPSLDYLPEGNFPDSATRAIDSERRLQFEHADAHWLSRRVLAVTWS 129 Query: 149 MNLPLTLRHYRVFISYCSPSKKKS--RADILEMENLVKIIRASLQGASITTQTVDAQAFI 206 + +F+ P ++ R + ++ V L G +T + + + + Sbjct: 130 PPGETASKFGELFLKESGPRGPRTHFRQTLARFQSDVGRFSDLLSG-GMTLKPLGDEDLL 188 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 + + + R D + L + D K+ Sbjct: 189 THLHTCLTGKTHPVRVPRIPTDLDALLATGDLTGGLDPKI---------------GRLWF 233 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV--EDQVKTHSEANLKYM 324 ++ PE +F L+ + PF + ++ D E Sbjct: 234 RVVTISGFPESSFP--------GFLDALAQV--PFAIRYSIRFIPLDPPTAERELARHRR 283 Query: 325 DLEKKSKTSYAKW---------FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 + S ++ + + G I F + Sbjct: 284 RWLQLRMGLLGMMTGRDQASGAQTSASEKGLDVEMAQAENADGSVRFGYAAFKILIFD-E 342 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAE 435 N E + + GF I N + ++ LP A + K L Sbjct: 343 NPSVLAERVRMVEKIVNNLGFGTIHEEMNCLSAWIESLPGHAYPNIRKPL--------MH 394 Query: 436 SFNVANLMPLVADNPLTPAGLLAPTYRNQLAFI--------DIFFRGMNNTNYNMAVCGT 487 S NV++LMP+ + A F + + G Sbjct: 395 SLNVSDLMPVTTVWSGRSVNPCPFYPQGSPALFLASSSGTTPFFGNIHVGDLGHTLILGP 454 Query: 488 SGAGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLRFNPFA 542 G GK+ L+ L FD G LC GG + + L F P A Sbjct: 455 PGMGKSVLMAFLAAQFFRYPRAQVFAFDKGSSSYVLCTASGGQFYEIAGPDSALSFCPLA 514 Query: 543 NITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN 602 + D + S++ L + + A++ +R + V+ +++ Sbjct: 515 GVDDPAERTWAQGWIESMLVLSGLTLTPAIKQEVKNALKTHADTPPDRRSLGVFVERIQH 574 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG-GLE 661 E L YT +G+ G+ ++D SLR + V E+ Sbjct: 575 LDVREA-----------------LRYYTKSGSMGELLDADTDSLR-TSHFSVFEMEYAFG 616 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 + L+ ++ L IE R+ L ++DE W L E I + + R Sbjct: 617 LPHAALLPLLLYLFHRIEQRL----DGRPTLLLLDEVWLFLSH--PVFQEKIREWLKVLR 670 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA--KYNQLYPDQFLP 779 + A I TQ D + S + KI L + + A + Sbjct: 671 KKNAAVIFATQQPFDVVN---SPIRDVILESCPTKIYLA-NPEAVAGPSHAAYATMGLSE 726 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS-SDGPDFEFVQQKRKE 838 ++IG + + + L + ++ A SD + ++ K Sbjct: 727 RSIEIIGSLVPKRHYY-----VTSSEGKRVIDLGLGKVALAFTGVSDQEELGVARRILKS 781 Query: 839 G 839 G Sbjct: 782 G 782 >UniRef50_A5IEK6 Type IV secretory protein VirB4 component n=7 Tax=Legionella RepID=A5IEK6_LEGPC Length = 924 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 160/946 (16%), Positives = 310/946 (32%), Gaps = 121/946 (12%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFM-NDT-TM 62 ++ +Q + L+ P + + + E P F+ L D+N E LF+ ND ++ Sbjct: 1 MKLFSQVSDWLLGQPNKPALTQQNIKKRFENHNPSFANQLSMVDFNDELNLFLLNDGVSI 60 Query: 63 GFMLEAIPINGANESIVEALDHMLRT---------KLPRGIPLCIHLMSS---------Q 104 G E I A + E L + L + P + + + Sbjct: 61 GSGFELASIP-AEATSTEHLHAVFSKIRDTFATVVPLHKEDPWVMQMYVNDEYSLKPVLT 119 Query: 105 LVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISY 164 + I + E S+S + R + + P + R +F Sbjct: 120 HIQQSIAPDIAETSFSRDYLARLDDLFCKMTRPEGLFVDPKTDAPYRGRRRRIRVLFYRL 179 Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 ++ + E + ++ I + L + + + + + + NP+ L + Sbjct: 180 YQKTQTTRELALAEHQEVMAQIESKLLSPGLQLKQLTGKDYYQWLVRWFAANPEELLARF 239 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLW--N 282 Y ++ + ++D + L PEI L Sbjct: 240 PYPKDKKPAGYTLSQNILFHEPQSDEHGFIF---DEMIHRILYIDGLKEAPEIGLLSREK 296 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 N + + T+ +V E+ + + LEK + K PS Sbjct: 297 PQANPKHRYALLDKLPEDATYTIQVVFENDEA----LDAHLLRLEKGIVGTSLK--PS-- 348 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET-ALEVEQDILNSFRKNGFELISP 401 + ++ R L G +++N + F + + + A+ +E+++ F + LIS Sbjct: 349 QVREDIKTARDELSIGNRL---FWVNQSIFYRASTKDQAVRIEKELKELFIEAKMPLISS 405 Query: 402 RFN--HMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP--AGLL 457 F+ + ++L LPF +Q + + +A+L+P+ N Sbjct: 406 GFDIHPINSYLNALPFNFIPQYARQYLRFDRL--MYASELASLLPVYGRNQGARHLPCFT 463 Query: 458 APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMG 516 + D+ + N +MA+ SG GK+ +I S++ ++F+MG Sbjct: 464 FFNRLGEPVLFDVLHHDFISQNSHMALFANSGGGKSVATGWMINSLMATKNARIILFEMG 523 Query: 517 DGYKSL---CENMGGVYLD-------GETLRFNPF-------ANITD---------IDQS 550 + + + + G E + NPF ITD I Q Sbjct: 524 NSFDRMLLHAKAHGKKTKQLLLSNKKNEAVPLNPFCEAYKAIHEITDNLNVEQAALIAQK 583 Query: 551 AERVRDQLS--------------------------VMASPNGNLDEVH-----EGLLLQA 579 ++ L M + L+E E LL++ Sbjct: 584 IMTLKANLEQPANSEDLSCDDGSRSYLAELALALRTMITEANALEEEQFTLADETLLIEV 643 Query: 580 VRASWLAKEN----RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTY 635 + + L N + + VV K D E A + R+ +M L+ Y N Sbjct: 644 LSDAILTSFNHDIPQMLTEHVVSAFKRRLDKETVARK---KDRILDMHDRLNSYVINSAK 700 Query: 636 GQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM-YRTPRNLKKLNV 694 ++FN L D V ++ ++D L VM SL+ I + Sbjct: 701 SRFFNVPTEPLGDFDIFHV-DISAIKDDTGKLALVMVSLLPRILAMAEASQNDHRPTFLF 759 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 IDE L F+ V + AR+ + ITQN+ D +S+KA+ Sbjct: 760 IDESH--LQFQIPSVVAVCLLVAKVARKLGLWLVAITQNVTDMNSEKATK----ILSLIE 813 Query: 755 YKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV 814 I+L KE + + P Q +I + K ++ +L + R+ Sbjct: 814 TWILLGLDEKEISDVKRF--KSLTPQQEALIRDIDSQKG-LYAEAVLLGSRYQGLFRVIP 870 Query: 815 DPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMAS 860 A+ ++ + K+ + +A LA + + + Sbjct: 871 PRYLLALLMTEKSEKAQRHTLEKQH-DVLKAAELLAEQLENKKQSK 915 >UniRef50_B1I0C3 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0C3_LYSSC Length = 631 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 88/608 (14%), Positives = 201/608 (33%), Gaps = 87/608 (14%) Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLA--RNPEIAFLWNMADNYSNLLNPELSISCPF 301 ++ +DY + + G + +F++ P + + + S PF Sbjct: 6 IEFHSDYFIIQI---GIGTKKYGRSFYIKPSGYPRKVRIGWLVGLFKAEDINVSVHSKPF 62 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 T + E + + + ++ ++ ++ LR+++ + +S Sbjct: 63 DRTDAVRQLKNKLDDYETVVISAQKQDNAGK-----IEAIGQQVRDAKTLREQIQNNMNS 117 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + ++ T + D E E + + E+++ FL+ P A Sbjct: 118 LHFTSISATIYA-DTLEELNEKSVAVERALAAESIEVVNAYDRQKEGFLSTQPLGANY-- 174 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYN 481 LK + + + +A + P + G+ Y N+ + + F + +++ Sbjct: 175 ---LKNSE--RNLDENALAAMFPHNSSTLNHTGGMPIGVYNNEYIYFNNFDSKLE--SFS 227 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYLD-------G 533 M + G SGAGK ++ +I G ++ D+ Y L +GG+ ++ Sbjct: 228 MGIFGISGAGKGVFVKTVIGRGYLDGITKNIILDVEPEYTELTYALGGIVIELRSDDVVS 287 Query: 534 ETLRFNPFANITD------------------IDQSAERVRDQLSVMASP----NGNLDEV 571 R NP + I++ + + VM + NLD Sbjct: 288 NFSRINPLDVYVEKEVKRRYTPFEYIVEKVNINEKVKEAIEFFKVMKESTYPKDPNLDPH 347 Query: 572 HEGLLLQAVRASW------------------LAKENRARIDDVVDFLKNASDSEQ--YAE 611 L + ++ + + ++ + V + SD + A Sbjct: 348 ELDALDKILKKLYAKCGITEDPESLYYHEEGMDEQGNIIFNRVYKKMPTISDVHRDIQAL 407 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYF----------NSDEPSLRDDAKMVVLELGGLE 661 L ++ ++ + A ++G + N P+ D++ +V ++ L Sbjct: 408 VENGNEMLKNLLSVVSLFLAGRSFGMFDCQTDIRDKDGNPLPPTALDESPIVTFDISKLS 467 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 L+ ++ NR+ KK + DE W +L F + EF + R Sbjct: 468 KNGIERPLAQHVLMTWVWNRLIVNNPKEKKRVIQDEAWMMLKF--PSMIEFFKTLSARGR 525 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + + ++Q ++ + AR +KQS+ + K + + F Sbjct: 526 KWNVSLTLVSQR---YEMFHRNEEARDIIAQLGTVAFMKQSSSDVEKILEAF--HFSDDV 580 Query: 782 RDMIGKFG 789 +I Sbjct: 581 GQVIRTAE 588 >UniRef50_D2LJR2 CagE TrbE VirB component of type IV transporter system n=3 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJR2_RHOVA Length = 834 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 82/505 (16%), Positives = 160/505 (31%), Gaps = 72/505 (14%) Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 Y+ + +N + L+ + I R+ GF N + FL LP A + Sbjct: 342 FGYYTPVLILMGENRDALLDEARLIARELRREGFASRVETVNTLEAFLGSLPAHAVPNVR 401 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNP------------LTPAGLLAPTYRNQLAFIDI 470 + L S N+A+LMP + P +P L T + +++ Sbjct: 402 RPL--------LHSLNLADLMPASSIWPGLPVCPSPLFPEGSPPLLYGATTGSTPFRLNL 453 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGV 529 + +T + G +GAGK+ L+ + VFD G +L G Sbjct: 454 HVGDVGHT----LIFGPTGAGKSTLLALIAAQFRRYRHARITVFDKGRSLFALAHAAGAQ 509 Query: 530 YL----DGETLRFNPFANITDIDQSAERVRDQLSVMASPN--GNLDEVHEGLLLQAVRAS 583 + D + P + + D L+ G + + +AVR Sbjct: 510 HYDLAGDTGSPGLCPLGRL-ETALDVAFAEDWLATCYELQQGGAPTPRQKEEIHRAVRLM 568 Query: 584 WLAKENRAR-IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 K R + D + +++ ++ L YT G G ++ Sbjct: 569 RETKSGEGRSLTDFIATVQD-----------------KDIRAALGTYTIEGALGHLLDAR 611 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + + V E+ L + +++Y+ R+ L ++DE W +L Sbjct: 612 SDGIEAAS-FTVFEIEELMALGEKN---LIPVLLYLFRHFERSLTGAPALLLLDEAWVML 667 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 E I + + R+ A + TQ++ D S + +I+L Sbjct: 668 GH--PVFREKIREWLKVLRKANCAVVLATQSLSD---AARSGILDVLLESCPTRILLPNE 722 Query: 763 AKE------FAKYNQLYP-DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 + A LY + ++ + +++ L + Sbjct: 723 EADKGGANGIAGPLDLYRLIGLNETEIALLKSAVKKRHYYYT-----SPEGRRLFELGLG 777 Query: 816 PLSRAMYS-SDGPDFEFVQQKRKEG 839 P++ A + S D V+ + Sbjct: 778 PVALAFTAVSSREDVARVRALIEAH 802 >UniRef50_C9M9C2 Ribosome recycling factor n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9C2_9BACT Length = 885 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 103/600 (17%), Positives = 200/600 (33%), Gaps = 75/600 (12%) Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 + L P + +L + + ++ D T + + K Sbjct: 243 VQTVSLMNYPS--------GTFPGILKDLQLLPVAMRWSNRFILSDMRDTLGQMDAKRRQ 294 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELR-------QRLGSGQSSVVSYFLNITAFCKD-NN 377 +K ++ +A+ V+ ++ + VV T + + Sbjct: 295 WSQKIRSLFAQ-ITGVQTTKVNQDAVQMVADVDDAIAAAHSGDVVYGNHTSTVVLRHADK 353 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 E ++++ F + G + + N++ FL LP + + + + L S Sbjct: 354 EILDAAAREVVKIFERAGCQAKIEKMNNLEAFLGSLPGHSRENVRQPL--------ITSL 405 Query: 438 NVANLMPLVADN--------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSG 489 N+A+++PL D P PAG A + + G +G Sbjct: 406 NLADILPLSCDWVGETTCPCPFYPAGSPALIQAASQGATPFALNLHVGDVGHTLILGPTG 465 Query: 490 AGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMG-GVYLD----GETLRFNPFAN 543 +GK+ L+ + VFD G L ++ V+ D + + P A Sbjct: 466 SGKSTLLATIAAQFNRYQDSQVFVFDNGRSIYPLAQSFRHSVFYDLARGEQDISLCPLAE 525 Query: 544 ITDIDQSAERVRDQLSV--MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 I D + S+ M P G + LL++A+ + A + F+ Sbjct: 526 IDQPDVRDWALEWLESLIEMVEP-GVVTPARRALLIEAMNNL-AESTSEASERTLTAFIT 583 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 + D + + L Y+ + G + D + + V E+ L Sbjct: 584 SLQD--------------ERLKDALSFYSLDQNGGYLLDGDHDDITY-SPFSVFEISALL 628 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 DR + AV+ L I+ R+ L +IDE W L ++ + I +T R Sbjct: 629 DRDKIAPAVLSYLFFQIQRRLT----GKPSLLIIDEAWTAL--RDEQFSAKIRAWLKTFR 682 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD--QFLP 779 + A I TQ+I D + S A + + KI+L + ++ Y + Q Sbjct: 683 KLNCAVILATQSITDVVN---SPIRDAVFESCPTKILLANPDAKSPAMSECYRNYLQLNT 739 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDGPDFEFVQQKRKE 838 Q D+I ++ ++ L + ++ + +S D V+ KE Sbjct: 740 RQVDLIAHMVRKREYYY-----ISPKGRRLFGLGLGKVALSFVGASGADDLAEVKSLSKE 794 >UniRef50_C1F578 Type IV secretion/conjugal transfer ATPase, VirB4 family n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F578_ACIC5 Length = 789 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 106/649 (16%), Positives = 227/649 (34%), Gaps = 74/649 (11%) Query: 219 SLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIA 278 + + QL + ++ Q V++ + +D+L +G R + F L PE + Sbjct: 195 EEWAEDDQLRANTGVDRQIVKNP--ITWHSDHLRVGKR--------YVQMFSLKATPEAS 244 Query: 279 FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANL--KYMDLEK-------K 329 L + L++ C I+ T + SE + K++ K Sbjct: 245 RP--------CLFSSLLTLDCDSIVCSTWRPKSTAAARSEIDAQEKFISFFKVGVLTRVM 296 Query: 330 SKTSYAKWFPSVEKEAKE--WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDI 387 S A +A +L + + S + ++ E + + Sbjct: 297 SGRDTASLETGAGAKAANSSVDDLSEVIRSLDKKSQGEYSLRLLLAANSPEHLRDTIPAV 356 Query: 388 LNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 +F ++I ++ F P +F R S +L + Sbjct: 357 HRAFVDARTQMIEESLGNLSAFYAMFPGNGKFNVFPLWLSEDHHARLSSIFAPHLGHPHS 416 Query: 448 DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG 507 ++ + T F D++ G+ M + G +G GK+ LI G Sbjct: 417 EDLDAEYLNVFETRTRTPFFQDVYVDGVRV----MLILGPTGTGKSVHGNQLIALEQKYG 472 Query: 508 GFAVVFDMGDGYKSLCENMGGV--YLDGETLRFNPFANITDIDQSAERVRDQLSVMASPN 565 GF+ +FD+G Y+S+ E GG + + R NPFA ++A+ Sbjct: 473 GFSYIFDIGGSYESVVELYGGRVDRIGKDGPRVNPFALEPTESNLKFLYTFIRLLLANGG 532 Query: 566 GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVL 625 L+ + ++ +AV+ +L R+ ++ ++ Sbjct: 533 AELEPEDDDVIHKAVQDMYLLDRENRRLSNLY--------------------LPKKLDRY 572 Query: 626 LDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRP--SLLVAVMFSLIIYIENRMY 683 L ++ +G Y F++ E L +++ + G+ + L+ +M L+ I + ++ Sbjct: 573 LSKWVRDGVYHAIFDNVEDGLSL-SRVQCFDFAGVNNEQYADLIEPLMVWLLRRINDVLH 631 Query: 684 R-TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 + K +I+E KN ++ E +T R++ G I Q+ D + Sbjct: 632 DPANLGVPKHILIEE--LFPSMKNRQLLEGALSSIKTVRKNLGGVTLIGQSAEDLGEN-- 687 Query: 743 SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQ 802 A + + S ++LK +N+ + + + F + +D+ + ++ Sbjct: 688 ---ADSIVNSCSSFLLLKD-----PTFNRKRYAELFRMNEQQLALFESLQDR--EALYIR 737 Query: 803 VENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 + + L +D S A +S+ D + + + E + + A Sbjct: 738 RDGLTKVVILNLDSRSYATFSTKPKDRVRRSKLIAK-YGLAEGIDRFAQ 785 >UniRef50_A3W6D5 Type IV secretion system protein B4, putative n=2 Tax=Roseovarius sp. 217 RepID=A3W6D5_9RHOB Length = 794 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 105/661 (15%), Positives = 221/661 (33%), Gaps = 83/661 (12%) Query: 166 SPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 +K I+ +E + ++ A A TV + ++ ++ + + + Sbjct: 162 RDFQKDIDTRIVALEEAMTLLMAMYSDAGAARLTVSSGDWLAVLAAVHGQSYGKIIAAPG 221 Query: 226 QLDPYSDLNYQCVEDSFDLKVRA-DYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 QL + N+ +++ + D G F + P + Sbjct: 222 QLLADTMSNFDVSFQGKTMRLESGDSARYGAI------------FGIKSYPSRTWP---- 265 Query: 285 DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKE 344 +L+ ++ P+ +T+T + + + ++ + A S+ ++ Sbjct: 266 ----TMLD---ALELPYDITITNSFTPR-RANEMVERIQRTFRQRGASEDAGV--SLTEQ 315 Query: 345 AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFN 404 E + SG+S+ ++ ++ FC D+ E + +I + ++ G L+ + Sbjct: 316 LIE---AADAVASGRSTFGTHHASVQVFC-DSAEELEQAASEIWRAGQETGAVLVRESWA 371 Query: 405 HMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG--------L 456 + P + + S N A L P Sbjct: 372 AKALYFAQAPGNWAYRIRDGI--------VSSHNFAELAAFHKTRPGRGPEASPWGKTIT 423 Query: 457 LAPTYRNQLAFIDIFFRGMNNTN---YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVF 513 PT + L + G + V G +G+GKT L+ G +VF Sbjct: 424 AFPTVTSSLYRFNFHEAGRRTDEPSVGHTLVLGRTGSGKTLGTAFLMAQARRVGARVIVF 483 Query: 514 DMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDE 570 D G + +GG Y + G+ FNP TD + A + D L + + + + Sbjct: 484 DKDQGLEMAIRALGGSYSEIKVGQPTGFNPMTTETD-ARGAAWLTDWLGDILARHRPFET 542 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT 630 V L +AVR A+ D + + + D +++ + ++T Sbjct: 543 VQTAALNEAVRQIAAAEPGLRTFDGLASLVASTDDD-------------GDLVSRVREWT 589 Query: 631 ANGTYGQYFNSDEP-SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNL 689 G YG F+ S+ ++ L++ L D+ + A++ L IE + Sbjct: 590 EVGRYGWLFSRPSAQSIAIGEDVLGLDMTELLDQDAERSALLAYLFRRIERVI---EDRR 646 Query: 690 KKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAA 749 + VIDE W++L + + + T R+ + +TQ D SS + Sbjct: 647 PTIIVIDEAWKML--ADDIFVKRLHDWLVTMRKRNCVVMMLTQTPGHLDQ---SSVGQII 701 Query: 750 WGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW 809 + + +I+ Y+ L + F ++ L++ S + Sbjct: 702 AESVATQILFPNPRANPEDYSILRLNAREA-------DFLSSPTAGLRLALIRSGADSVF 754 Query: 810 H 810 Sbjct: 755 V 755 >UniRef50_B0FYU0 TrsE n=6 Tax=Staphylococcus aureus RepID=B0FYU0_STAAU Length = 672 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 100/662 (15%), Positives = 218/662 (32%), Gaps = 106/662 (16%) Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISC---PFIL-TLTLVVEDQVKTHSEAN 320 I + P+ +++ N + I+ P + + + + +K Sbjct: 56 YIKTLLVVDYPQSVKGAYLSNLLKK--NGNIQITKFIRPANIERMIDHLNNSIKNKKAEQ 113 Query: 321 LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 ++ D ++ + ++++E + E + ++ + ++ IT D+ E Sbjct: 114 MRTTDPKRNA---------TIKREIESSKEQLDKFLDEKTGFMYMYMYITL-NGDSYEKI 163 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 +E+D+ + + + +P +F T LP + A Q ++ Sbjct: 164 QALEKDVKRTLTRLRLKTHTPTNAMRESFHTVLPLN------RNFLSAFTQQNMDTATAG 217 Query: 441 NLMPLVADN--PLTPAGLLAPTYRNQ--LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 + LTP + +N L +D F N NM + GTSG GK+ L Sbjct: 218 HFFMFDDSEIIDLTPNTSVFGINKNTDSLVAVD-FNNKEKTLNKNMTIIGTSGVGKSTLN 276 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDI------ 547 +I + + D D + + + GG ++ ++ NPF ++ Sbjct: 277 MRMILDNVKKSIRQFIIDPEDEFSYITKYYGGTVVNISTSSNIKINPFEIFSEEVFEKED 336 Query: 548 DQSAERVRDQL-----------SVMASPNGNLDEVHE-----------GLLLQAVRASWL 585 + E D L +++ S G L +L +R + Sbjct: 337 ETDNETTSDVLTENNEQESQIDTLVRSKIGKLKTFFRVLKDEISQTEISVLSSTLRQLYQ 396 Query: 586 AKE-------------NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTAN 632 K + + ++ + LK+ P L ++ ++++ YT Sbjct: 397 DKGFKGNAKLSDFKSEDYPTLTELYNKLKDLD--------PEKYEVLKDLTLIIEDYTME 448 Query: 633 GTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKL 692 F+ +++ D ++V L L+ + A ++ ++ + + + R + + Sbjct: 449 HGTTTIFDG-YTNIKLDNEIVTFNLKPLQTEKDVQSAAYLNIFSFLWDEITK-DRTTETV 506 Query: 693 NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGN 752 + DE L N +F + Y+ R++ G I TQ I D A N Sbjct: 507 LMTDELHFL--ATNEYSLDFYYQAYKRIRKYGGGAIASTQQIKDILRTS-QEIGSAIIEN 563 Query: 753 SSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRL 812 S K +F + + K LL ++ R+ Sbjct: 564 SHTKFFFGMDNVGVDDVVDKLGLKFSDQEISHLTKKKKG------EALLLYGTQRAFIRI 617 Query: 813 FVDP-----LSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEE 867 +D ++ +Y + + + E L + + ++A LE L + Sbjct: 618 DLDREETRLWNKELYETIYEESADKEPNYVEQLGLSDI-----------DLAELEEELRQ 666 Query: 868 HE 869 E Sbjct: 667 AE 668 >UniRef50_P54910 Conjugal transfer protein trbE n=24 Tax=Alphaproteobacteria RepID=TRBE_RHIRD Length = 820 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 123/861 (14%), Positives = 271/861 (31%), Gaps = 129/861 (14%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANE----SIVEALDHMLRT 88 S P F+ L+PY + + D ++ G+ + + + ++ +L Sbjct: 9 HSGPSFADLVPYAGLVDNGVILLKDGSLMAGWYFSGPDSESSTDAERNDVSRQINAILS- 67 Query: 89 KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEG 148 +L G + + + + A + E Sbjct: 68 RLGSGWMIQVEAVRVPTAD-------YPKESDCHFPDLVTRAIDAERRAHFQKERGHFES 120 Query: 149 MNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRA----SLQGASITTQTVD--A 202 + + +++ P ++S + +L+ S + + V+ Sbjct: 121 RHA--------LILTWRPPEPRRSGLTRYIYSDTASRSATYADKALESFSTSIREVEQYL 172 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDP-YSDLNYQCVEDSFDLKVRA-----DYLTLGLR 256 + I M + + + D + + + + +++ D+L Sbjct: 173 ANVVSIRRMMTRETSERGCFRVARYDELFQFIRFCVTGQNHPVRLPEIPMYLDWLVTAEL 232 Query: 257 ENGRNSTARILNFHLA---RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 ++G + P + W N +L+ P + Sbjct: 233 QHGLTPLIENRFLGVVAIDGLPAES--WPGILNALDLM--------PLTYRWSSRFVFLD 282 Query: 314 KTHSEANLKYMDLEKKSK-TSYAKWFPSVEKEAKEWGELR------QRLGSGQSSVVSY- 365 + ANL+ + + K + + + + + + S + +Y Sbjct: 283 AEEARANLERTRKKWQQKVRPFFDQLFQTQSRSLDQDAMMMVAETEDAIAEASSQLRAYG 342 Query: 366 -FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 + + +++ E + + + GF N FL+ LP ++ + + Sbjct: 343 YYTPVIVLFEEDQARLQEKCEAVRRLIQAEGFGARIETLNATDAFLSSLPGVSYANIREP 402 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPLT-----------PAGLLAPTYRNQLAFIDIFFR 473 L N+A+L+PL + + L+ + +++ Sbjct: 403 LINTR--------NLADLIPLNSVWSGSAVAPCPFYPPASPPLMQVASGSTPFRLNLHVD 454 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMGGVYL- 531 + +T + G +G+GK+ L+ + SG FD G SL + G + Sbjct: 455 DVGHT----LIFGPTGSGKSTLLSLIAAQFRRYSGAQIFAFDKGGSMLSLTLGIDGDHYQ 510 Query: 532 ---------DGETLRFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVR 581 DG+ L F P A++T D + + ++ + G + + + R Sbjct: 511 IGGDATEGGDGKALSFCPLADLT-TDGDRAFAAEWIEMLVALQGVTITPDYRNAIS---R 566 Query: 582 ASWLAKENRAR-IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 L E+R R + D V ++ + E+ L YT +G GQ + Sbjct: 567 QVGLMAESRGRSLSDFVSGVQ-----------------MREIKDALHHYTVDGPMGQLLD 609 Query: 641 SDEPSLRDDAKMVVLELGGLEDRPSL-LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 ++E L + E+ L + LV V+ L IE R+ P L ++DE W Sbjct: 610 AEEDGLALGS-FQCFEIEELMNMGERNLVPVLTYLFRRIEKRLTGAP----SLIILDEAW 664 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 +L + I + + R+ A + TQ+I D + S + KI L Sbjct: 665 LMLGH--PVFRDKIREWLKVLRKANCAVVLATQSISD---AERSGIIDVLKESCPTKICL 719 Query: 760 KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSR 819 A + Y ++ I K ++ + + + P++ Sbjct: 720 PNGAAREPGTREFYERIGFNERQIEIVATAIPKRDYY----VVSPEGRRLFDMALGPVAL 775 Query: 820 AMY-SSDGPDFEFVQQKRKEG 839 + +S D + ++ E Sbjct: 776 SFVGASGKEDLKRIRALHSEH 796 >UniRef50_B5Z5T7 Putative uncharacterized protein n=1 Tax=Bacillus cereus H3081.97 RepID=B5Z5T7_BACCE Length = 819 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 93/534 (17%), Positives = 188/534 (35%), Gaps = 67/534 (12%) Query: 296 SISCPFILTLTLVVED-QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQR 354 F + + + VK + ++ + + +E L Sbjct: 264 DFPIEFNIKFSFKSQQTNVKKVRQLKKRFKHFNDEIQQGDVDEDSVIENAHDRLTLLLDE 323 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVE-QDILNSFRKNGFELISPRFNHMRNFLTCL 413 +G+ + + N+ D ++ LE + ++I ++ FE+ P+ + + F + + Sbjct: 324 TKNGKKEI--MYCNLMLVIFDKSKEGLERKVKEIEQFYKGTDFEIARPKVDQLALFNSVI 381 Query: 414 PFMAGK-GLFKQLKEAGVVQRAE---SFNVANLMPLVADNPLTPAGLL----APTYRNQL 465 P + ++Q+ + ++ A S + N + +T LL A RN + Sbjct: 382 PSSFAEVNYYEQVVDTSLLATASFDISNKIGNRFGMYLGKVVTNYELLDVTQAKNIRNNI 441 Query: 466 AFIDIF-----FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYK 520 + RG +TN N+ V G G+GK+ L++ L G + D + YK Sbjct: 442 VIFNPLITKRALRGTVHTNGNILVTGPPGSGKSMLVKSLFTWSTFFGAKILYVDPKNEYK 501 Query: 521 SLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAV 580 E Y E N ++ E V G D + +AV Sbjct: 502 KFFEAAVEKYPTKEFKSMYQKMNFVELSSGGENV-----------GAFDPLIFLKGDEAV 550 Query: 581 RASWLAKENRARID-----DVVDFLKNASDSEQYAES------PTIRSRLDEMIVLLDQY 629 + + E ++D D VD ++ + + + I+ + +++ L++Y Sbjct: 551 ETASIILETLGKVDSRNRKDSVDIFESIQEVMKLPKPNLSKVLNRIKEKNEQLGKFLEKY 610 Query: 630 TANGTYGQYFNSDEP--SLRDDAKMVVLELGGLEDRPSLLV------------AVMFSLI 675 YG+ DE +L D ++ +L L GL+ S ++M SL Sbjct: 611 NIG--YGRMLFGDEDSQTLNFDKQVNILGLQGLQLPQSEKKLEEMNQAEIIGVSIMVSLS 668 Query: 676 IYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 Y+ ++ T ++ + + + DE W L KN + IE RT R + ITQ Sbjct: 669 KYVN--IFSTKKDEEAMIIFDEAWVLKKSKNGEAL--IESMLRTGRSLETDIVIITQAFD 724 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAK-EFAKYNQLYPDQFLPLQRDMIGKF 788 DF+++ K + + + ++++ Sbjct: 725 DFNANTLKELIG-------CKFAFRPKTDGTITDILDFFDLEVNDANKELVRNL 771 >UniRef50_D1AV72 CagE TrbE VirB component of type IV transporter system n=2 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV72_STRM9 Length = 850 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 113/848 (13%), Positives = 266/848 (31%), Gaps = 130/848 (15%) Query: 52 ESGLFMNDTTMGF--MLEAI--PINGANESIVEALDHMLRTK---LPRGIPLCIHLMSSQ 104 E G+ +N + GF + ++ E V ++ L LP G + + Sbjct: 24 EDGIILNKNS-GFQSTFKVRFYDLDYMGEDEVTLINDRLNNAYKRLPDGFSVHFE-VQRN 81 Query: 105 LVGDRIEYGLREFSWSGEQAERFNA--------ITRAYYMKAAATQFPLPEGMNLPLTLR 156 L+ + + ++ + YY+ L + Sbjct: 82 KSDKYPTKNLKGKPYPTQIIDKIREKSVTKDVFYSTEYYITLTYIMSNDNSEKITKLLDK 141 Query: 157 HYRVFISYCSPSKKK------SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 +F+ K + ++ E ++ V + L+ A+I+ + + + + + Sbjct: 142 LSNLFMKNKVKEDSKEELLKIYKNELKEYKDQVLMFIEQLKTAAISAELLKGEELLGFLY 201 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS---TARIL 267 IN + D + +YLT+ NG + + Sbjct: 202 SAINMEK----------------REKIRVPVDDTMLLDEYLTVSTLSNGEYTKINDEYVK 245 Query: 268 NFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLE 327 + P+ + + N S++ + ++ + + + Sbjct: 246 VITINMFPD--------NVTQRIFNQLESLNFEYRYVTRFIMLSKEEALEMLKNFKIYFS 297 Query: 328 KKSKTSYAKWFPSVE-------------KEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 K KT A+W V+ + E +G + Y + K Sbjct: 298 AKVKT-LAQWMLEVKNGTEVQNIDTVALDKVDEADFALNEAKTGVVAYGYYTFSFIIKDK 356 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 D E + ++ F ++N + + LP + K Sbjct: 357 D-LEILDKKINEVRRILNFYDFVAGVDKYNTLDSIFGSLPGNIVNNVRK--------APM 407 Query: 435 ESFNVANLMPLVADNPLTPAG-------LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 ++ ++ L+P+ + L +L ++++ + + + + G Sbjct: 408 NTYLLSALLPMSSLYTGNKINNHLKDVALFTTKTEKELFYLNLHNKDIG----HSLIIGP 463 Query: 488 SGAGKTGLIQPLIRSVLDS--------------GGFAVVFDMGDGYKSLCENMGGVYLD- 532 +GAGK+ L+ + + L FD + L GG + D Sbjct: 464 TGAGKSFLLSMIAANFLKYEGKVLDEYGSSKIKPAQVFFFDKDASSRVLTYTSGGKFYDL 523 Query: 533 -GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRA 591 + + F P NI + + ++++ + D ++ +A+ + +AK Sbjct: 524 GKKEIAFQPLKNIHIKSEREWALGWIINILEQERVSYDATTRNIVEKALDSLSIAKVESR 583 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 + ++ ++ ++S + + +LD Y N YG+YF+++ ++ ++ Sbjct: 584 TLSNLRTYIASSSKT---------------IASVLDSYCGNNVYGEYFDNNFDNISNNNF 628 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 + E+G + +P ++ ++ + IE + ++DE W L KN K+ + Sbjct: 629 IT-FEMGDVISKPKVISPLLDYIFHKIETEKL---DGTPTVILLDECWIFL--KNEKMRD 682 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 I + + R+ + I TQ++ + S A I L N Sbjct: 683 KINEWLKVLRKKNTSVIFATQSLSEIAD---SPIFSAIVDACKTNIFLPNEKAMSTWLNL 739 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV-DPLSRAMYSSDGPDFE 830 + I +D ++ S +L D + +S D Sbjct: 740 YKKFNLTEKEIQEINNAVMKQDY-----FVKTTEGSRLFQLNPTDIEIAYLGASTNNDQN 794 Query: 831 FVQQKRKE 838 + + + Sbjct: 795 TIISLKNK 802 >UniRef50_C1F4R3 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4R3_ACIC5 Length = 834 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 115/711 (16%), Positives = 231/711 (32%), Gaps = 80/711 (11%) Query: 163 SYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL-- 220 S + + D+ +E V+ L + + +D + ++N++ + Sbjct: 164 SMKVLLRSQIERDLAWLEQRVQTFVRQLADFA-RIEVLDYKGQFRFFRRLVNYDDWRIAG 222 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFL 280 P Q +N + L+V DY+ + + T + L + P Sbjct: 223 EPGHSQFLCDQVVNSLLEPERDHLRVGDDYVRILTMKEAIGETRPLALDALLKIP----- 277 Query: 281 WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS 340 +N + + P E + K + + S AK P Sbjct: 278 -------ANFMAISEWMPLP---AEAARKEVNKRRRHFNISKTGFVSQLSNDP-AKTNPR 326 Query: 341 V----EKEAKEWGELRQRLGS--GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 E + + L L + + + L I + KD + + + + F Sbjct: 327 DVLVDESKQADIENLGDCLRALGDGRQLGEFSLTIVLYGKDR-QAVDSLVGEFASVFTNA 385 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 L + +N + + +P L + + N A+L L P Sbjct: 386 DGTLFAETYNQLNAYFAIVPGNYAFNLRRLY--------LLNTNYADLSFLFTILPGEKV 437 Query: 455 GLLAPTYRNQLAFID----IFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 + D F + + G +G+GK+ L L+++ F Sbjct: 438 NSYLGAEYLAVMETDNQTPYFLNLHCGEVAHTLILGMTGSGKSYLCSFLLQNAQKYNPFT 497 Query: 511 VVFDMGDGYKSLCENMGGVYL----DGETLRFNPFANITDIDQSAERVRDQLSVMASPNG 566 +FD+G G+++L GG YL + NPF+ ++ + + L V+ + Sbjct: 498 FIFDIGGGFEALTHIFGGSYLNVGREERDFTINPFSLAPTR-ENQQFLFSLLRVLIEGDN 556 Query: 567 ---NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 LD E L + ++ + + + + S + E+ Sbjct: 557 QRYKLDFREEIKLWNGIERIYMLEPGQRTLS-------------------NLSSIVGELK 597 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L ++T G YG F++ +L G D P LL ++F ++ + Sbjct: 598 DRLYRWTRAGQYGFLFDNPNDTLSFTN-FQTFNFRGWGDAPELLEPLLFYILHRASQEIC 656 Query: 684 RTPR-NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 R K ++DE W + +N + ++I + + R+H A I TQ+I + Sbjct: 657 DPRRLATFKTFLMDEAWLFM--RNQVIRDYIMQAQKMWRKHNAAMILATQSIKELQESGM 714 Query: 743 SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQ 802 + KI L + A Y + + + D+I L++ Sbjct: 715 LHI---VAESCPTKIFLANPEMDRAVYAEAF--HLNNTELDLIASLVPPG-----QMLIR 764 Query: 803 VENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 S L VD ++ M + + ++ I E + +LA + Sbjct: 765 KAQSSKKVHLNVDSVTHWMAVNSANENLLRREYFTR-YGISEGLRRLADEH 814 >UniRef50_C2BD73 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD73_9FIRM Length = 1128 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 109/756 (14%), Positives = 244/756 (32%), Gaps = 83/756 (10%) Query: 122 EQAERFNAITRAYYMKAAATQFPL-PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 ++ + Y++ L + R V +S + S K++ Sbjct: 404 KEILLKDKNDNKDYLRKEYNDMLLDKISKGINSIQRERYVTLSLEADSYKEAIEKFNIYT 463 Query: 181 NLVKIIRASLQGASITTQTVDA---QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQ- 236 +L+K ++ ++ + I+I+ ++N K + + + Sbjct: 464 DLMKRSIKTIGSGDKNNSDLEVLTEEDRIEILFNLLNPEKG----KYLKYYNIEKMRKEG 519 Query: 237 -----CVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 + F + + +Y+ + N + ++ L +F + + ++ + Sbjct: 520 LTVADIISPDF-VDITPNYIKI----NDYYVSFYFIS-ELPNLLNPSFFAGINEEFNEQI 573 Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGEL 351 + + P+ + + + A L+ ++ K S P +E +E L Sbjct: 574 LTTVIYN-PYEQKEAVKLISSQYLNYNAELESLNKRSKLNNSLFIIPPKLEVAIEETKAL 632 Query: 352 RQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT 411 + + + + + K E + + + + L + + Sbjct: 633 LDDVTVRDQKLFKTNVVVGVYGKTKVE-MDKNASLLKDYCDRKMVNLTIAKNMQEYALNS 691 Query: 412 CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDI- 470 CLP + + S A MP N L P+G+ A D+ Sbjct: 692 CLPIGQD--------MLPMKRSLTSEAGAVYMPFKTQNILDPSGMYYGV---NPANKDLI 740 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLI-QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGV 529 N N + G G GK+ ++ ++L + ++ D + YK LC ++ G Sbjct: 741 LVNRKKFKNGNGFILGKPGGGKSFAAKNEILNTILTTDDDVIIVDPENEYKDLCLSLNGE 800 Query: 530 YL---DGETLRFNPFANITD----------IDQSAERVRDQLSVMASPNGNLDEVHEGLL 576 Y+ N F + I + + + +M L +L Sbjct: 801 YIPIEQSSPYHMNLFDIEENDKEDGGLEGSIKEKVGFITGCIGLM--MERALTIEENAIL 858 Query: 577 LQAVRASW--------LAKENRARIDDVVDFLKNASDSEQYAESPTIRSR--LDEMIVLL 626 + + K+N+ ++ + + + S R + +I L Sbjct: 859 DDCITQIYKSWFKYVSEQKQNQQEVN--YKYFPTLTTLREKLASLQGREKNEAYSLITAL 916 Query: 627 DQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP 686 YT F+ ++ ++ V + GL + L M ++ + R+ R Sbjct: 917 RMYTTGSL--NMFD-QLSNINPKNRLAVFSIRGLNNEGVLKKLAMNIIMDQLWQRLLRNG 973 Query: 687 RN-LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 +N IDE + L D N F+ ++ AR++ G ITQN+ D + Sbjct: 974 KNGRPTWIYIDEIYLLFDNANSM--NFLRNLWKRARKYNGFPTGITQNVDDLLAIHD--- 1028 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 AR N+ + ++L QS+ + LY + I + F Sbjct: 1029 ARTMLSNADFVMMLTQSSIDKLGLANLY--NLGETLQTYITDSEPGHGLIHTEFGTIPFE 1086 Query: 806 HSSWHRLFVDPLSRAMY---SSDGPDFEFVQQKRKE 838 + P + MY +++ + +Q++++ Sbjct: 1087 NKF-------PKNTHMYEVMTTNPAEKAEIQRRKQN 1115 >UniRef50_Q9PHJ8 Conjugal transfer protein n=6 Tax=Proteobacteria RepID=Q9PHJ8_XYLFA Length = 815 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 120/753 (15%), Positives = 232/753 (30%), Gaps = 97/753 (12%) Query: 100 LMSSQLVGDRIEYGLREFSW--SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR- 156 ++S RE+ GE F Y K A++ L + L + R Sbjct: 71 NIASPNTAVWSHVVRREYGEFPGGEYQPGFCHDFNEKYRKHMASEKMLVNELYLTVVYRP 130 Query: 157 ------HYRVFISYCSPSKKKSRA--DILEMENLVKIIRASLQGASITTQTV--DAQAFI 206 + S +P + + R ++ +E+L+ + ASL Sbjct: 131 QPVKAVKFLDIFSSKAPKELQQRQTEELEVVEDLISVALASLDRYEPELIGCYEHKGKMF 190 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 V E + D + + P +++ + S + ++L G ST Sbjct: 191 SEVLEFLAFLVDGEWRRFP--LPRTEIRE-VLATSRPFFGKGGLMSL----KGPTSTQFC 243 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 + P I +LN L + F+LT + + + + Sbjct: 244 AAVTIQEYPSI-------TCPG-ILNELLGMPFEFVLTQSFSFISKPVAVGRMKRQQARM 295 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 + E + L S + + + ++ D + E D Sbjct: 296 VNSGD--------VAGSQIDEIDDALDDLTSNRFVMGVHHFSMMIRAHDQ-KALNEHISD 346 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL- 445 +G + F + LP + + SF + P+ Sbjct: 347 TGAVMSDSGMKWAREDAGIAGAFWSQLPGNFEYRVRVGDITSRNFAGFSSF---HNFPIG 403 Query: 446 -VADNPLTPAGLLAPTYRNQLAFIDIFFRGMN---------NTNY----NMAVCGTSGAG 491 + +N A + T + + + N+ N V G SG G Sbjct: 404 RIRNNQWGDAVTMFKTTSGAPFYFNFHKGEEGADAKKSAKLDPNHKDLANTVVIGKSGMG 463 Query: 492 KTGLIQPLIRS-------VLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPF 541 KT L L+ V+FD G MGG Y +G FNPF Sbjct: 464 KTVLEMMLLAQTQKFEQPQFGKKLSCVLFDKDLGAAIGVRAMGGRYYPLKNGVPSGFNPF 523 Query: 542 ANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 + + + + L E + +A+ A + + RI +++FL Sbjct: 524 QMEPTT-SNLTFLETLIKQLVKHESLPLTPRQEREISEAIAGVMGAAKQKRRIGALLEFL 582 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGG 659 + ++ + L+++ GT F++ +L D +V ++ Sbjct: 583 DSTDENGLHP--------------RLERWCRGGTLAWLFDNPVDTLSLDNCTIVGFDVTE 628 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 D + + L IE+ + + +DE W+LL+ + + + T Sbjct: 629 FLDNDATRTPTIMYLFHRIESLI----DGRRIPIFLDEFWKLLN--DPAFEDLAQNKLVT 682 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLP 779 R+ G + TQ+ S A A G ++ KI L ++ Y + + Sbjct: 683 IRKQDGFLVMFTQSPKQVLK---SPIAYAIIGQTATKIFLPNPEADYDDYVNGF--KLTE 737 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRL 812 + +++ G Q FL++ +S L Sbjct: 738 REFEIVKSLGEKSRQ----FLIKQGQNSVVAEL 766 >UniRef50_B2IAS2 Type IV secretion/conjugal transfer ATPase, VirB4 family n=39 Tax=root RepID=B2IAS2_XYLF2 Length = 854 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 93/658 (14%), Positives = 211/658 (32%), Gaps = 96/658 (14%) Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 ++ +NH + S + Q + K+ +++ + Sbjct: 233 WLHFCVTGLNHPIQL---PSNPMYIDSLIGGQELYPGVVPKIGRNFIQV----------V 279 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 I F L P +L+ + + + + D + S Sbjct: 280 AIEGFPLESYP-------------GILSVLAELPIEYRWSSRFIFLDHHEAVSHLEKFRK 326 Query: 325 DLEKKSKTSYAK-WFPSVEKEAKEWGELRQR----LGSGQSSVVS--YFLNITAFCKDNN 377 ++K + + + + + ++ + + S +VS Y+ ++ ++ Sbjct: 327 KWKQKMRGFFDQVFNTNTSHVDEDAVSMVADASSAIAETNSGLVSQGYYTSVVVLMNESR 386 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 E + + + + F N M +L LP + + + L + Sbjct: 387 EQVEQSARRLEKAINALAFTARVETINTMDAYLGSLPGHGVENVRRPLLN--------TM 438 Query: 438 NVANLMPLVADNPLT------------PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 N A+L+P P L T N I++ R + + + Sbjct: 439 NFADLLPTSTIWTGENRAPSPLFPPNAPPLLHGVTSGNSPMRINLHVRDLG----HCIIF 494 Query: 486 GTSGAGKTGLIQPLI-RSVLDSGGFAVVFDMGDGYKSLCENMGGVYL----DGETLRFNP 540 G + GK+ + + + G FD G C+ M G + + + L F P Sbjct: 495 GPTRTGKSTKLALVAFQWRRYLGARIYAFDKGLSMYPTCKAMHGHHFSIASNTDKLAFAP 554 Query: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 + + + A + +++A + +A+ + ++++ + +F+ Sbjct: 555 LSRLDTRTRRAWAMEWIDTILALNGVITSPAQRNAIAEAILSM-----SKSKASTLSEFI 609 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 D + L YT +G G ++ E L A + E+ L Sbjct: 610 VTVQDEV--------------IREALKPYTVDGNMGYLLDAVEDGLEL-ADFMTFEIEQL 654 Query: 661 EDRPSLLV-AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 V+ L + IE + L ++DE W +L + + IE+ R+ Sbjct: 655 MGLGEKFALPVLLYLFMRIEESLSEED-ARPTLLILDEAWLMLSHTTFR--DKIEEWLRS 711 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFL 778 + + + TQ+I + S +++ +I L K ++Y Sbjct: 712 MAKKNCSVLMATQSISEAAK---SGILDIITESTACRIFLANPNAREEKTAEIYGRLGLN 768 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDGPDFEFVQQK 835 Q ++I +D ++ E ++L + PL+ A S+D +++ Sbjct: 769 NRQIEIIASAVPKRDYYY-----VSEKGRRLYQLALGPLALAFVGSTDKESIAMIRKL 821 >UniRef50_Q1QFG8 Type IV secretion/conjugal transfer ATPase, VirB4 family n=3 Tax=Rhizobiales RepID=Q1QFG8_NITHX Length = 803 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 104/694 (14%), Positives = 213/694 (30%), Gaps = 96/694 (13%) Query: 169 KKKSRADILEMENLVKIIRASLQGASITTQTVDA--------QAFIDIVGEMINHNPDSL 220 + + E+ + +R +L A + + ++ + ++N Sbjct: 160 SVAMQTALAELRDAATAVRENL--AGYGARQLGVVRRDGVWFSEPLEFLTLLLNGGLPR- 216 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFL 280 P + ++ + + +R G T + P Sbjct: 217 --------PMHLPRMNLADALSMKRIFFGHNAIEVRGAGPEDTRFGAMVSIREYPAQTGP 268 Query: 281 WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANL--KYMDLEKKSKTSYAKWF 338 + + L + FI T + + D+ + + + + +D+ ++ + ++ Sbjct: 269 GS--------FDNLLRVPHEFIATQSFAIVDRPEAAKQIDRVSRQVDMSDEAGSIVSEHL 320 Query: 339 PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 + R L + ++ + + + +D E V + Sbjct: 321 ----------DDARDELLASEAIYGEHHMTVMCLGRDLAEVGAAVTAV-GAALTDRSVIW 369 Query: 399 ISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLA 458 N F LP K + S N A L P+G A Sbjct: 370 TREDLNCEPAFWAQLPGNFTYIARKGV--------ISSKNFAGFTSLH----NYPSGRPA 417 Query: 459 PTYRN-------QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI--RSVLDSGGF 509 + + ++ N V G +G+GKT + + + Sbjct: 418 GNHWGPAISVFETTSQTAYYYNHHVRDIGNFTVVGPTGSGKTVFLSFIAAQTQRIQPRPK 477 Query: 510 AVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPN- 565 + D G + +GG Y + GE FNP + + D + E + + M P Sbjct: 478 LLFVDKDRGAEIFIRALGGQYETLVPGEQTGFNPLS-LPDSAPNREFLYQLFAFMLRPGK 536 Query: 566 -GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIV 624 G L E ++ A+ ++ A + L+ IR+ +++ Sbjct: 537 GGELSASEEQVIRNAIASALAAGPAGRTLKAFSTLLRGR-----------IRAGEGDLLA 585 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR 684 L+ + G FN+DE + ++ + D P + A + + + + Sbjct: 586 RLESWMRPDQRGWLFNNDEDRFSLSSVF-GFDMTRVLDDPVVRTAALMYIFHR-TDELLT 643 Query: 685 TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASS 744 + +DEGWRLLD + FI +T R+ G TQ+ D KAS+ Sbjct: 644 GD---PVMIFLDEGWRLLD--DEVFAFFIRDKLKTIRKQNGIVGFGTQSAADIVRSKASN 698 Query: 745 AARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVE 804 +S I + ++ Y F R++ G + SFL++ Sbjct: 699 T---LIEQTSTNIFFPNPKAD----DESYKQAFRLSGREVAWIRGTVPE--SRSFLIKHG 749 Query: 805 NHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKR 836 S +L + P + S + R Sbjct: 750 RDSVVAKLNLANMPDLIKVLSGRTETVAELDALR 783 >UniRef50_Q0AD16 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AD16_NITEC Length = 832 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 100/698 (14%), Positives = 220/698 (31%), Gaps = 96/698 (13%) Query: 177 LEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQ 236 + +L+ + R ++ T + ++ + I +L + + L YQ Sbjct: 170 QGLADLINMRRMRTVTINVEGSTYQSDELVNYLHFAITGEEIALRIPDCPMYLDAWLGYQ 229 Query: 237 CVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELS 296 + K+ ++ + P + +LN Sbjct: 230 ELWPGDTPKLGNKFIA---------------CVAIDGFPSASEP--------GILNLLDG 266 Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE--------KEAKEW 348 + + + + ++ + N + +K + +++ F S + A + Sbjct: 267 LPLAYRWSSRFIFLEKHQAIFSLNRYRLKWRQKIRGFWSQVFKSQKGVINTDALDMATQT 326 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 SG S Y+ + ++ + + GF N + Sbjct: 327 ESAINDAHSGLVSY-GYYTPVIVLMHEDRIHLEKQADYVKRQIDYIGFSARIETVNALEA 385 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL------------TPAGL 456 +L LP + + L + N+++L+PL + P +P + Sbjct: 386 WLGSLPGQTYPNIRRPL--------IHTLNLSDLLPLASIWPGLKQNPCDFFPAGSPPLM 437 Query: 457 LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGF------- 509 T +++ + +T + G +GAGK+ L+ + Sbjct: 438 QTVTTGATPFRLNLHVGDVGHT----LIFGPTGAGKSTLLALIAAQFSRYQSKPGMDGSK 493 Query: 510 ----AVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPN 565 +VFD G +LC+ G++ D I + + V L+ + SP Sbjct: 494 LPASVLVFDYGYSLYTLCKAAQGIHYD-----------IGNDSEEIGAVMP-LADIDSPA 541 Query: 566 GNLDEVHEGLL---LQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEM 622 G L LQA++ + + I + L+ A + + + +++ Sbjct: 542 GALWAEEWIATCYELQALKPP--TPQQKTEIHRAIGLLRAAPMHGRSLTDFVAQVQDNDI 599 Query: 623 IVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM 682 L YT G G + E S+ A+ E+ L + A +++Y+ R+ Sbjct: 600 QDALSHYTLKGPMGHLLDGAEDSMEL-AQFTTFEVKELMS---MGRANALPVLLYLFRRI 655 Query: 683 YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 +T L +DE W +L + E + + +T R+ + + TQ++ D Sbjct: 656 EKTMHGQPVLLALDEAWAMLG--DPVWREKVREWLKTLRKQNCSVVLATQSLSDAV---R 710 Query: 743 SSAARAAWGNSSYKIILKQSA-KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWF-SSFL 800 S KI+L ++ P + + K+ + + Sbjct: 711 SGLLDVLTEQCPTKILLPNKEADQYGTKETPGPADLYTMFGLNKREIEILKNGQYKRDYY 770 Query: 801 LQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRK 837 + L + PL+ A + SD ++ Sbjct: 771 YKSPLGRRLFELGLGPLALAFLAVSDKDKLAEIRYFID 808 >UniRef50_UPI0001713796 hypothetical protein Aasi_0876 n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=UPI0001713796 Length = 368 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 137/351 (39%), Gaps = 20/351 (5%) Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG---ETLRFNPFANITDI------DQ 549 +I+ +G +V D G Y+SL +GG Y++ + L+ NPF Sbjct: 1 MIKDRYYAGHTVIVIDSGGTYRSLFRALGGKYIEYTSEKPLKLNPFLIKKTEGRYIPDSY 60 Query: 550 SAERVRDQLSVMASPNGNLDEV--HEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 + + ++ M + + + E LL + + I + F Sbjct: 61 KISFLSNFIAKMWKEDLKNNPIAPVEYALLSKFLTLYYESLPKDEIPTLTRFCTWVKGYV 120 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL 667 T ++ +++L+ +T G Y ++FNS E +D++++ EL ++ L Sbjct: 121 AEEAIDTTLFNINNFLIVLEPFT-QGIYKEHFNSTEVVYLEDSRLLCFELESVKSDSKLY 179 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 V+ L Y+ + P +K + V +EGW +LD ++IE+ +R R+ A Sbjct: 180 PLVVKVLFDYVMQIVASQPEQIKAIKV-EEGWTMLDDS---SKDYIEELFRKGRKTNTAI 235 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK-YNQLYPDQFLPLQRDMIG 786 ITQN+ + SS A A N+S I+L + + +++ Sbjct: 236 WIITQNVDEIRD---SSIAGAMKNNASTFILLYNDKESVRRDIADFLGMNAFDMEKYASL 292 Query: 787 KFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRK 837 + + + ++ + S+ R+ A+ +S + + Q + Sbjct: 293 RRRDSYLNGYREVFIKEMDKSAVWRIETSLFEHAILTSRPDERNAMAQLIR 343 >UniRef50_D0ZHN0 Type IV secretory pathway component n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZHN0_EDWTE Length = 852 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 101/607 (16%), Positives = 182/607 (29%), Gaps = 89/607 (14%) Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 + LLN LS P +LT + + + LE + + + Sbjct: 290 AGLLNALLSAPFPLVLTQSFNFLSKAIAIELLGRQKNRLETTGDLAV--------SQVEA 341 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 + L SG+ + L++T F +D + + + Sbjct: 342 IDDGLDDLASGRIVYGEHHLSLTVFGED-ARDLRGNLSAARSELADCSMVVAREDWALAA 400 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-------ADNPLTPAGLLAPT 460 + LP A K S N A N PA + T Sbjct: 401 AYWAQLPGNA--------KYRPRPAPISSRNFAGFSSFHNYPTGERTGNQWGPAVTMFKT 452 Query: 461 YRNQLAFIDIFFRGMNNTN---------------------------YNMAVCGTSGAGKT 493 + + ++ N + G SG+GKT Sbjct: 453 TSGAPYYFNFHEALDSSKARKKAELEREKGAAALKELEAKEEQKALGNTLIIGPSGSGKT 512 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQS 550 + L+ V+FD G + GGVYL +G FNPF D + Sbjct: 513 VVQGFLMSQSKKFNPTQVIFDKDRGLEIYVRASGGVYLPLQNGVPTGFNPFQLAPTED-N 571 Query: 551 AERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYA 610 + D + + G+ + E + +AVR + + RI +DFL S + +A Sbjct: 572 LLFLTDLVKKIC--GGSFNNQEEKEIDKAVRGVMGLSKEKRRIGRCLDFLDPVSQNGPHA 629 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK-MVVLELGGLEDRPSLLVA 669 L ++ G+ G ++ E +L D M ++ D + Sbjct: 630 --------------RLAKWCEGGSLGWVLDNPEDALDFDNNTMFGFDVTEFLDNAEVRTP 675 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 V+ L IE + + +DE W+LL + + + + R+ G + Sbjct: 676 VVMYLFHRIEQLI----DGRRFQMFMDEFWKLL--LDEYFEDLAQNKQKVIRKQNGIMVY 729 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQ+ D S A + + + + + A Y + L Sbjct: 730 GTQSPKDVL---RSPIAHSLIEQCATYVFMPNPKADRADYVDGF-----HLTEREFQLIK 781 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKEGLSIHEAVW 847 FL++ +S L + A+ S + + Q ++ AVW Sbjct: 782 EDMAPGSRRFLVKQGQNSVVAELNLKGFDDELAVISGTTDNVNLMTQIIEQHGD-DPAVW 840 Query: 848 QLAWKKS 854 + + Sbjct: 841 LPIFHEQ 847 >UniRef50_C6J2V9 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2V9_9BACL Length = 661 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 102/620 (16%), Positives = 202/620 (32%), Gaps = 65/620 (10%) Query: 258 NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS 317 T +F EI+ A +L+ + L + + + Sbjct: 60 GTITPTRYFRSF----YAEISSGNTWAGMLDSLIRGDHG-KGDVDLAIHVQPSSNDRELD 114 Query: 318 EANLKYM-DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 E + L + + ++ E + E ++R+ + + + Sbjct: 115 EIGRRIAGLLSDLADEKDVRKVDAMRDEIADLKERQKRIRLNVERSFRVSIQVIVSAPEW 174 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAES 436 E +++ + ++ F L S + + LP + + K+ V ES Sbjct: 175 KE-LMKLCRSLVQRFAGKSIYLRSADGQQLAALQSVLPTVKASAVQKE-----HVLSLES 228 Query: 437 FNVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 NVA+L P + +G+ + + ++D + + NYNM + G SGAGKT + Sbjct: 229 SNVADLFPWGGGSLNHRSGVVIGKDRMGRPVWLDNWHPEL--ANYNMCIIGRSGAGKTFV 286 Query: 496 IQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFAN--------- 543 + G + D Y +G ++ + R NP+ Sbjct: 287 TLLITHRSSHIGRQIGIIDWKGEYGDFLRALGCPFIELHEHSKHRINPYDVDITELADGT 346 Query: 544 -ITDIDQSAERVRDQLSVMAS--PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 DI+++A V+ + M S L + + +A+R + E + + Sbjct: 347 RFVDIEEAANSVQALVFKMISVYDRSVLTGEVKVFIGRAIRQQYAEYEITTDPESLYTTD 406 Query: 601 KNASDSEQYAESPT-----------------IRSRLDEMIVLLDQYTANGTYGQY--FNS 641 + + + + LL +T G Y F+ Sbjct: 407 QTMQGQGIFRTGKVRKAMPELIGLWEKMNAHKSEAIRKASELLQPFTRKGEMSSYSIFDG 466 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAV-MFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 A + + L P ++ + +F ++ R + +KKL +I+E + Sbjct: 467 QSTIELKSAPIFGFAINRL--DPEIMRPIGLFVTERWMMERWAKKHPEVKKLLIIEEC-Q 523 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 + + E +R R + +TQ + F S A AA NS KII Sbjct: 524 NIFLDEDFGAVWAESAFREGRATNTGIVPVTQGLEVFT---RSQAGMAAIKNSPIKIIGI 580 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA 820 Q A + L + A K L++V+N S + P Sbjct: 581 QEALDIDAVRGKLA---LTEGEADFLVYQARKG----DMLVKVDNQSVIVHVDASPYEHM 633 Query: 821 MYSSDGPD--FEFVQQKRKE 838 ++++D D + ++ KE Sbjct: 634 LFTTDPNDPLYAERKRYIKE 653 >UniRef50_Q2SRS9 Membrane protein, putative n=1 Tax=Mycoplasma capricolum subsp. capricolum ATCC 27343 RepID=Q2SRS9_MYCCT Length = 945 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 80/511 (15%), Positives = 167/511 (32%), Gaps = 52/511 (10%) Query: 305 LTLVVED-QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 L++ ED Q + K +D K+ Y K S++ EA L +L ++ + Sbjct: 393 LSIFSEDVQAALLDKTGKKMVDNSTLIKSKYFKKQESLQLEA--LEYLENQLQINRNVLT 450 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + L I + E ++ N+ +K + F + Sbjct: 451 NSSLMIINSAESLKELRKIEAKNFANA-KKIKININPIPFKQFEGL--------AQACLI 501 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQLAFIDIFFRGMN-NTNY 480 S+N+A + + + + F++ + +NY Sbjct: 502 TTNTLNQGIPMSSYNIAYGWAFENEENNDNNMFILGESDSTGEPIIFNQFYKSNSIRSNY 561 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLR 537 NM G+SG GK+ ++ I + L + D + Y +L G +D G Sbjct: 562 NMFTVGSSGKGKSTDVKKAILANLAQNNRVYIIDPQNEYSTLGREFGASLIDLGLGHNTV 621 Query: 538 FNPFA---NITDIDQSAE----RVRDQLSVMASPNGNLDEVHEG--------LLLQAVRA 582 NP + + D E ++ ++ + L++ V+ Sbjct: 622 INPLEVQILLIEEDGFNENESYPIKSIINNHFDWLEKFFSLINNDWTRDDLVLVMNFVKN 681 Query: 583 SW-------------LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQY 629 + L + D++ + N ++++ + + + L + Sbjct: 682 LYTNLGLYDVQTIQQLKSFKYPVMSDLISLINNYQFTDEFDKRRKQTKLANILDRLTFDF 741 Query: 630 TANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR-PSLLVAVMFSLIIYIENRMYRTPRN 688 NG Y +N + ++ ++ L + ++ L+ +I+N+++ Sbjct: 742 EYNGKYQLIYNG-QTNIDLSNDFIIFNTKNLANSGSGNENVGLYVLLSFIQNQIFNNIIE 800 Query: 689 LK---KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD-SDKASS 744 + VIDE + +D N +F+ +T R+ I TQN DF S + Sbjct: 801 NPDTNTVLVIDELHKYIDPNNTTTLDFVYTMTKTVRKFNAGMILCTQNPSDFLGSSMITK 860 Query: 745 AARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 A A N Y K+ ++ Sbjct: 861 KAEAILQNCQYAKFFGLKQKDLEAVVDMFRS 891 >UniRef50_P55399 Probable conjugal transfer protein trbE part 2 n=9 Tax=Proteobacteria RepID=TRBE2_RHISN Length = 662 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 85/572 (14%), Positives = 185/572 (32%), Gaps = 60/572 (10%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 +LN + + + + D + + ++K + + + + Sbjct: 104 GILNSLDLMPLTYRWSSRFIFLDAEEARQKLERTRKKWQQKV-RPFFDQLFQTQSRSVDR 162 Query: 349 GEL------RQRLGSGQSSVVSY-FLNITAFCKDNNETAL-EVEQDILNSFRKNGFELIS 400 + + S +V+Y + D++ AL E + I + GF Sbjct: 163 DAMTMVAETEDAIAQASSQLVAYGYYTPVIILFDSDREALQEKAEAIRRLIQAEGFGARI 222 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP------- 453 N +L LP + + L + N+A+L+PL + +P Sbjct: 223 ETLNATEAYLGSLPGNWYCNIREPLIN--------TSNLADLIPLNSVWSGSPVAPCPFY 274 Query: 454 ----AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG- 508 L+ + +++ + +T + G +G+GK+ L+ + Sbjct: 275 PPNSPSLMQVASGSTPFRLNLHVDDVGHT----LIFGPTGSGKSTLLALIAAQFRRYDRS 330 Query: 509 FAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQ-LSVMASPNGN 567 FD G L GG + + D + + + LS + S Sbjct: 331 QIFAFDKGSALLPLTLAAGGDHYE----------IGGDNAEGRKALAFCPLSDLESDADR 380 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 +L A++ + ++R + V + +A ++ R E+ L Sbjct: 381 AWAAEWIEMLVALQGVTITPDHRNAMSRQVTLMASAPGRSLSDFVSGVQMR--EIKDALH 438 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 YT +G GQ +++ L A E+ L + + ++ Y+ R+ + Sbjct: 439 HYTVDGPMGQLLDAEHDGLSLGA-FQTFEIEQLMNMGERN---LVPVLTYLFRRIEKLLD 494 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 + V+DE W +L + I + + R+ A + TQ+I D + S Sbjct: 495 GSPSVIVLDEAWLMLGHPVFRAK--IREWLKVLRKANCAVVLATQSISD---AERSGIID 549 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHS 807 + KI L A + Y ++ I K +++ + Sbjct: 550 VLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIISNATPKREYY----VVTPEGR 605 Query: 808 SWHRLFVDPLSRAMY-SSDGPDFEFVQQKRKE 838 + + P++ + +S D ++ E Sbjct: 606 RLFDMALGPVALSFVGASGKEDLNRIRTLHSE 637 >UniRef50_Q832B8 TraE protein, putative n=41 Tax=Bacteria RepID=Q832B8_ENTFA Length = 825 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 103/680 (15%), Positives = 213/680 (31%), Gaps = 98/680 (14%) Query: 122 EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMEN 181 EQ + FN I R Y + + L G N + +I++ + A +E Sbjct: 147 EQTDAFNGIRREY---SGMLKGQLARGNNGLTKTK----YITFGIEADSLKEA-KPRLER 198 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDL---NYQCV 238 + + A+ + + ++D + I+ M + + + + D + + Sbjct: 199 IEADVLANFKVLGVRAHSLDGYERLAILHRMFHPADNQKF--KFAWDAIWKTGLSSKDFI 256 Query: 239 EDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 Y +G + +I ++ L+ E S+ Sbjct: 257 APDSFTFKSGQYFQIG------------RTYGAVSFLQILAPELTDRMLADFLDLENSM- 303 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDL-------EKKSKTS---YAKWFPSVEKEAKEW 348 ++TL + DQ K DL +KK+ + + E Sbjct: 304 ---VVTLHIQSIDQSAAIKNIKRKITDLDRMKIEEQKKAVRAGYDMDIIPSDLATFGSEA 360 Query: 349 GELRQRLGSGQSSVVSYFLNIT--AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 L + L S + L + A + E + I + L + Sbjct: 361 KTLLEDLQSRNERMFLVTLLVMNHARTRQKLENNIFQAAGIAQKYNCA---LRRLDYQQE 417 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR---N 463 + ++ LP L + + + + + A +P L N Sbjct: 418 QGLMSSLPLG--------LNQIAIQRGLTTSSTAIFVPFTTQELFMNGEALYYGLNALSN 469 Query: 464 QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAVVFDMGDGYKSL 522 L D N N + GT G+GK+ + + + L + + D Y L Sbjct: 470 NLIMAD----RKKLKNPNGLILGTPGSGKSFSAKREITNAFLITQDDIAIIDPEQEYSPL 525 Query: 523 CENMGGVYLDGETLR---FNPFA---NITDIDQ----SAERVRDQLSVMASPNGNLDEVH 572 + +GG +D NP N ++ D ++ + + ++ L+ V Sbjct: 526 VQRLGGQVIDISPASDQYINPMDLTLNYSEDDNPLTLKSDFILSLMELIVGGKAGLEPVE 585 Query: 573 EGLLLQAVRASWLAKENRARID------DVVDFLKNASDSEQYAESPTIRSRLDEMIVLL 626 + ++ + V + + + D+ L+ ++E + L Sbjct: 586 KTVVDRCVHMVYRDYLQDPKPEKMPVLGDLYRLLREQPEAE-----------AQRLATAL 634 Query: 627 DQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP 686 + Y FN + ++ +++V + L L M + + R+ Sbjct: 635 EIYVTGSL--NVFN-HQTNVEIKSRIVCYVIKNLG--KQLKKFGMQVVQDQVWGRVSENR 689 Query: 687 RNLK-KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 K IDE LL + + + + ++ R+ G ITQN+ D AS Sbjct: 690 EAHKSTRLYIDEMHLLL--REEQTAAYTVEIWKRFRKWGGIPTGITQNVKDLL---ASRE 744 Query: 746 ARAAWGNSSYKIILKQSAKE 765 + NS + +L Q+ + Sbjct: 745 IANIFENSDFIYMLNQAGGD 764 >UniRef50_D0UIP4 ATPase n=5 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=D0UIP4_AGGAD Length = 927 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 97/646 (15%), Positives = 216/646 (33%), Gaps = 74/646 (11%) Query: 170 KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDP 229 + ++ + + +L + + + + + + + P Sbjct: 257 EDIELNLQHFNEIANRVGNALDKFG-ANRLTTYEKYDVMYSQQLEFY---NFILTGNYQP 312 Query: 230 YSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSN 289 LNY ++ + T + NG+ S + + + D ++ Sbjct: 313 VRVLNYPIYSYLGNVDMIMAKDTAEINVNGKLS--YVRGIEIKDW--------VQDTHAG 362 Query: 290 LLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWG 349 L+ + ++C +ILT + + + + + + + L + Sbjct: 363 FLDSLIGLNCRYILTQSFSIVPKTEALTLIDRQLKQLRSTEDDGI--------SQQDALL 414 Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 + L SG + + + D+ + ++ + + GF + + Sbjct: 415 LAKDELVSGNVCFGDHHFTLMLYA-DSLKEVQKISTEAFDKLSDLGFIVSLSNIALDEAY 473 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV--ADNPLTPAGLLAPTYRNQLAF 467 L+ LP F+ + N + P+ +N A L T N + Sbjct: 474 LSQLPCNFK---FRPRVSMISSKNFVGLNSLHNNPVGKATNNCWGNAITLLKTNTNTPFY 530 Query: 468 IDIFFRGMNNTNY------NMAVCGTSGAGKTGLIQPLIRS-------------VLDSGG 508 + + ++ + A+ G SG GKT L L+ L+ Sbjct: 531 FNFHQTRLGRNDFGDMHLGHTAILGKSGTGKTVLATFLLSQCTAFSNPDTFPKNSLNKKF 590 Query: 509 FAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPN 565 A+ D G + MGG Y +G+ FNPF + + + + + ++++A+ + Sbjct: 591 TAIYLDKDYGAEIAVRAMGGKYNRLKNGQPTGFNPFMLEKN-EPNITFLNNFIALLATSD 649 Query: 566 GN-LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIV 624 G+ L + + AVRA D+ + S + + Sbjct: 650 GSTLSTKDKEDINFAVRAVM----------DLDKEYRAEGISRLLENIQKDVENENSLER 699 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L + G YG F+++ SL + + + + D P+++ + F L+ ++ + Sbjct: 700 RLRIWKKGGIYGWVFDNETDSLSFNEYDIYGFDGTEVLDNPAVINPLAFYLLFRVQQIL- 758 Query: 684 RTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS 743 + + +DE W+ L ++ EF G +T R+ G + ITQ+ + S Sbjct: 759 ---DGRRVVVFLDEFWKWL--QSDSFSEFAYDGLKTMRKKNGFIVPITQSPDEIIK---S 810 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 ARA I L S ++ +Y + + + +I Sbjct: 811 KIARAIIEQVETFIFLPNSKADYHEYT--HEFKVSEKEYSIIKNLE 854 >UniRef50_A6V9Y0 Type IV secretory pathway, VirB4 component n=62 Tax=Proteobacteria RepID=A6V9Y0_PSEA7 Length = 983 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 148/912 (16%), Positives = 300/912 (32%), Gaps = 126/912 (13%) Query: 38 PQFSRLLPYRDY--NQESGLFMNDTTMGFMLEAIPIN----------GANESIVEALDHM 85 P F LLP+ +Y +++ L + + E +P+ A +++ EAL + Sbjct: 76 PSFVDLLPWAEYLPDEQVMLLEDGRSRAVFFELVPLGTEGRDPNWMQNARDALKEALQNS 135 Query: 86 LRTKLPRGIPLCIHL---MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 + + +S +++ + + +E + A+ ++++ + Sbjct: 136 FDEHETSPWIVQFYAQDEISWDNFQEQLRQYVHPRARGSAFSEMYLALM-KHHLEGISKP 194 Query: 143 FPLPE--------GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS 194 L +R + ++ + + ++++ + I+ L A Sbjct: 195 GGLFVDTAVSKLPWRGQQRRVRMVVYRRIRKADAQIRGQDPTAYLKSICERIQGGLANAG 254 Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDL----NYQCVEDSFDLKVRADY 250 I + Q + + N +PD L L + +L + ++D L D+ Sbjct: 255 IVASRMSGQDVRNWLIRWFNPHPDHLGKTDADLRRFYELVCRPDEPILQDELPLADGTDF 314 Query: 251 ------------LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPE-LSI 297 T G+ I+ L + P + LN + Sbjct: 315 SQNLFYRQPVSDATQGVWLFDAMPHRVIVVDQLNKAPLTGHF-TGETLKGDGLNALFDRM 373 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 +L +T+VV Q L++ SK + S+ ++ +R+ +G Sbjct: 374 PEDTLLCITMVVTPQDMLEG-------HLQQLSKKAVGDTQASIHTR-EDVATVRRLIGR 425 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVE-QDILNSFRKNGFELISPR--FNHMRNFLTCLP 414 +I F + + T LE + N G + P+ + ++L LP Sbjct: 426 EHKLYRG---SIALFVRGRDHTQLEERCITLSNVLLGAGLVPVEPQNEVGPLNSYLRWLP 482 Query: 415 FMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFR 473 + L+ Q + ++ANL P+ T G D F + Sbjct: 483 CNFDPNEKRALEW--YTQMMFAQHIANLSPIWGRTTGTGHPGFTLFNRGGAPLTFDPFNK 540 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYLD 532 N + + G +G+GK+ + LI +L V + G+ + L + L Sbjct: 541 LDRQMNAHGFIFGPTGSGKSASLTNLISQMLAMYLPRMFVAEAGNSFGLLADFAKRFGLS 600 Query: 533 GETLRFNPFANIT------------------------------------DIDQSAERVRD 556 +R P + ++ D++ + Sbjct: 601 VHRVRLAPGSGVSLAPYADAIKLVESPDQVKVLDAEDIEASDSVQGSKADLEDDQRDILG 660 Query: 557 QLSVMA---------SPNGNLDEVHEGLLLQAVR--ASWLAKENRARID-DVVDFLKNAS 604 ++ ++A + L + QA+ A A NR + DV D L AS Sbjct: 661 EMEIVARLMITGGEEKEDARLTRADRSAIRQAILAAARTCAAANRTVLTQDVRDALYQAS 720 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL--ED 662 S+ A P R+RL EM + + G G+ FN + +A + V++ E Sbjct: 721 RSDGSA--PERRARLAEMAEAMQMFCM-GADGEMFNREGTPW-PEADLTVVDFATYAREG 776 Query: 663 RPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 + L SL+ + N R + + + DEG + K+ + + K + R Sbjct: 777 YAAQLGIAYISLLNTVNNIAERDQFKGRPIVKITDEGH--IITKHPLLLPYAMKITKMWR 834 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + + TQNI D + A + + L E K ++ + P Q Sbjct: 835 KLGAWFWLATQNIDDIPASGAP-----MLNMIEWWLCLNMPPDEVEKISRFR--ELSPAQ 887 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GL 840 + M+ + F+ +L + R+ L A+ ++ + + G Sbjct: 888 KSMMLSARKESGK-FTEGVLLAKGKEYLFRVVPPSLYLALAMTENEEKNQRYNIMQATGC 946 Query: 841 SIHEAVWQLAWK 852 EA Q+A Sbjct: 947 DELEAALQVAAD 958 >UniRef50_Q5I721 VirB4 n=1 Tax=Dichelobacter nodosus RepID=Q5I721_DICNO Length = 796 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 91/575 (15%), Positives = 188/575 (32%), Gaps = 84/575 (14%) Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT-LGLRENGRNSTA 264 + + + N N +++ +R Q+ Y + ++ +K+ + +T G+ Sbjct: 187 LRFLNYLCNLNQNAVPVQRAQISEYLPTATISIGNNEYIKIENNGITRYGVIMTFAEYPE 246 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 L + E+ W M +T T D+ + +Y Sbjct: 247 ETSTGMLQKFLEMP--WQMT------------------VTQTFAPIDKAEARDWLTREYN 286 Query: 325 DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVE 384 L+ S E + ++ E Q + + Q + ++ ++ D+ E Sbjct: 287 RLQNTDSGS--------ETDLQDLYEANQAVSADQFLLGDFYWSVMLID-DSPEKLKRKL 337 Query: 385 QDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMP 444 + GF + + ++ LP K + S N A +MP Sbjct: 338 SEADAILSSAGFRASVNKIAKVDSYFAQLPANIALQPRK--------AKLSSANCAQMMP 389 Query: 445 LVADNPLTPAGL-------LAPTYRNQLAFIDIFFRGMNNT-----NYNMAVCGTSGAGK 492 N G + T+ ++ + + ++ N + G +G GK Sbjct: 390 FQKQNHGKRLGNAWGAAVAMLRTHNEEVYYFNFHDPEKGDSTGKDIAGNTFISGATGTGK 449 Query: 493 TGLIQPLIRSV--LDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDI 547 T L+ L+ V+FD G MGG Y GE FNPF ++ + Sbjct: 450 TVLVSFLLAQSQRYAHPPKIVMFDKDLGSSVFVRAMGGKYSQIKLGEPTGFNPF-HLKNT 508 Query: 548 DQSAERVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAK-ENRARIDDVVDFLKNASD 605 + + + M S + + + A+ + ++ I+ + L + D Sbjct: 509 ATNRTFIAQLIKSMLHSDQNPITAEQDTQIESAIMQVMSSSDQSLMDIEAFANLLPSGDD 568 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS 665 S + L ++T G Y FN+ E + + ++ ++ D Sbjct: 569 S---------------IQSRLKKWTC-GQYAWVFNNREDNFSTNEHILGIDYTQFLDNEE 612 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 + ++ L I+ + + +DE W+ L K+ ++E RT R+ G Sbjct: 613 IRTPILMYLFHRIQEML----DGTPLIITLDEAWKPL--KDPMFQAYLEDKQRTIRKERG 666 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 + +Q+ D + A + I L Sbjct: 667 LLVFASQSPADAYLGL----SHAFLEQIATHIFLP 697 >UniRef50_D1WC41 ATPase n=9 Tax=Lactobacillus RepID=D1WC41_9LACO Length = 675 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 102/661 (15%), Positives = 214/661 (32%), Gaps = 84/661 (12%) Query: 203 QAFIDIVGEMINHNPD-SLYPKRRQLDPYSDLN----YQCVEDSFDLKVRADYLTLGL-- 255 ++ ++ ++++ + K Q+DP +N + + D +D++ G Sbjct: 5 ESLQNLGDKILHRESTVNTQIKEPQIDPTQVINDAGIKRLLRDGYDVEFLVKTQPQGGIT 64 Query: 256 -RENGRNSTARILNFHLARNPEIAF-LWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 ++ ++ + P LW +LN + + + Sbjct: 65 FDDDHAIGDGYSACVNILQYPTDPNILWATQV----MLNDST------VAIMDVKTASSE 114 Query: 314 KTHSEANLKYMDLEKKS-KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 + SE N +L ++ A + ++ +L + I + Sbjct: 115 RLKSEINRSLQELGDQATNGRKATSMSDAQDNYQDLMDLSSSISRQGEIPKKIVSRIFVY 174 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 E+ E +D++ S + N F F + + + K + Sbjct: 175 AP-TIESLQEKIRDLIKSLKGNDFRATVYNFTQADQYKS-MTQKLTKQERSFAAVPEQIM 232 Query: 433 RAESFNVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 A + N P + P G+ L T D F ++NM V G GAG Sbjct: 233 PARTLGFGN--PFSFQSLKDPRGIPLGTTSAGGAFIFDQFRSTNTRRSFNMMVLGKMGAG 290 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPFANITDIDQ 549 K+ L++ L + D Y L +GGV + DG NP + + Sbjct: 291 KSTLLKMLTEGSFARNMYWRGIDKSGEYVRLVRALGGVVVNLDGSEGMINPLEVMATVTD 350 Query: 550 SAERVRDQLSVMASPNGNLD-----------EVHEGLLLQAVRASWL------------- 585 +V D+++ + E+ +R+ ++ Sbjct: 351 KEGKVVDEVASFMQHLDKVSVLFKMVNRDFAEIEIQDFKNILRSFYIYYGLLPKDWQRNP 410 Query: 586 --------AKENRARIDDVVDFLKNASDSE---QYAESPTIRSRLDEMIVLLDQYTANGT 634 ++ + ++ + E SP R +++ + ++ N Sbjct: 411 GKVRLTGKDPQDYPTFSEFSRYVDKCNSEEYLSAIHASPQRRRTFEKIKIGVEAMIDN-- 468 Query: 635 YGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 YGQ F+ K+V+ + + ++ S+ A +FS + I N+ + R L Sbjct: 469 YGQMFDGHSSMKDLSREKVVLFDTSTVANQGSVYQAQIFSTLSLIWNQALQNGRRQNYLL 528 Query: 694 ---------------VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 V+DE ++++KN +I+ R R+ I TQ+ + Sbjct: 529 DNGVITNDEISYFDVVLDECHNIVNYKNMNAVTYIKDFEREMRKFNAGIIFATQSPEEMV 588 Query: 739 SDKASSAARA----AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 DK +S ++ + + K+++ + AK +L D +P I Sbjct: 589 PDKVNSVEQSDLKVVFDLCAIKVMMAMENSQLAKIKKLLGDSLMPSDYSEIPSLTTGNAI 648 Query: 795 W 795 W Sbjct: 649 W 649 >UniRef50_D1PSM3 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM3_9FIRM Length = 881 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 95/606 (15%), Positives = 195/606 (32%), Gaps = 66/606 (10%) Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 +V E IN + ++ + + + ++ + + ++ R Sbjct: 258 YLVREFINVDIYTIAEEVKNYPNMAKAKPAIYNKEIQRRLCPNRIDFTRDHAEQSGLMR- 316 Query: 267 LNFHLARNPEIA---FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 + P L+ +A F + +T + +D + + ++ Sbjct: 317 RTLMIKNFPAQIPPRALYTVASMRG----------TSFTMRMTPLQKDNARKLIDEQIRN 366 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV 383 + S A +E + + Q+++ S + I + K E + Sbjct: 367 KAVI--GGKSQATEQMDAAQETMDIKNFYAEVTRNQNTIYSVNVYIEIYGK-TLEDLANL 423 Query: 384 EQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLM 443 EQ + G + F + P + + S VA L Sbjct: 424 EQQVKIELAGVGITYDQLNYEQRNGFSSVQPLGSDHFIL-------CSNNLPSKTVAALY 476 Query: 444 PLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS 502 P + + P G+ T R + DIF R TN + G++G GK+ L + ++ Sbjct: 477 PFSYSSLIHPHGMPLGRTDRGGPVYADIFQRDDQITNGVFFISGSAGQGKSYLQKKILTF 536 Query: 503 VLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFA-----NITDIDQSAE--- 552 ++ G V D + Y + +GGV +D + N F D+++ AE Sbjct: 537 MVTRGVHCYVMDPENEYSDVTRGLGGVVIDCASGNHKINIFEVRRIKLEDDVEEGAELPE 596 Query: 553 -------------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASW----------LAKEN 589 ++D+ +M + +L+Q + AS L ++ Sbjct: 597 ISNESPMFLQHLSWLKDEFRIMMPEMPDSTLRALMILVQGMYASVGIDQHTDFDRLQHQD 656 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD 649 + DF++ Y P + + ++L G FN + Sbjct: 657 YPTFSTLYDFVQKQLGKNSY---PMLTKEMISEVLLYINDPTYGELSNIFNGTTTIDVKN 713 Query: 650 AKMVVLELGG-LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 ++ +G LE L AV +L YI + + R + L DE + L+ Sbjct: 714 NPLICFSMGALLEGSEQRLQAVENNLNTYIWSIVLL--REFQVLLSFDELYMYLEQ--PL 769 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 + ++I R +R++ TQ + D + + SS+K + + Sbjct: 770 MAKYISYFARRSRKYNACIGVATQQLQDCLDESVRRYSSPIINMSSFKFLFYSGQVDLQD 829 Query: 769 YNQLYP 774 + Sbjct: 830 MKEALK 835 >UniRef50_Q6LGX0 Hypothetical TrbE protein n=1 Tax=Photobacterium profundum RepID=Q6LGX0_PHOPR Length = 798 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 103/690 (14%), Positives = 219/690 (31%), Gaps = 96/690 (13%) Query: 177 LEMENLVKIIRASLQGASITTQTVD---AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDL 233 ++ ++ + ASL+ + D F+ + + + + + S + Sbjct: 162 EKLNDIEGRLSASLRLTRLEAHQEDGRWVDPFLSYLRYCLTGHWHLITVPIVPMAIDSLI 221 Query: 234 NYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNP 293 + F+ KV Y++L I F L +P N+LN Sbjct: 222 GAVDMWTGFEPKVDDAYVSL----------ISIDGFPLLSSP-------------NVLNA 258 Query: 294 ELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF--------PSVEKEA 345 ++ + + V D + + E+K + K Sbjct: 259 LDYMNVEYRWSTRFVFFDNREAIQLLKTERKKWEQKVVSFKDKLIKNPNPPIDADALNMV 318 Query: 346 KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNH 405 ++ L +G+ Y KD + A E GF N Sbjct: 319 NQYESANTALSAGELQYGHYTSTFVLRHKDRHALAEMTEYTTKTLNLIAGFSCRVETVNA 378 Query: 406 MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT------------P 453 L LP + + + L + N+ +L+PL + + P Sbjct: 379 TEALLGTLPSDSLHNIRRPL--------LSTDNLCDLLPLASIWTGSETCPCPFYPDNSP 430 Query: 454 AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVV 512 ++ N +++ + +T + G +G GK+ + ++ V Sbjct: 431 PLMVCTAQGNTPFRLNLHVEDVGHT----LLFGPTGKGKSTALAIMVAQCFRYPNAQVFV 486 Query: 513 FDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMA-SPNGNLDEV 571 FD +L + +GG ++D FA + D+D E D + + + ++ Sbjct: 487 FDKKRSMYALSQ-LGGTHIDIGDNSAPSFAPLCDLDNDFEWCCDYIEQLLVLQSVSVTPA 545 Query: 572 HEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 + A+ + + L Q+ +E+ ++ YT Sbjct: 546 MRSAIFAALTTMRGSP---------IQTLSEFKAQCQH----------NEIKTAIEYYTV 586 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK 691 G G ++ E +L + +V E+ GL R ++ Y+ R+ R+ Sbjct: 587 QGRSGDLLDAQEDTLSLAS-FMVFEIDGLMKRGDKDA---IPVLSYLFRRIERSLNGQPS 642 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG 751 V+DE W + F + +++ + R+ A I TQ++ D S Sbjct: 643 FIVLDEAW--VAFSHPIFLAMLKEWLKELRKANCAVILATQSLSDAIK---SGILDVLVE 697 Query: 752 NSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHR 811 + +I L + + Y L ++ + + K ++ + + Sbjct: 698 SCPTQIFLPNEKAPL--FAETYHQFGLNDKQIELLRHATPKRDYY----VCQPTGNRLID 751 Query: 812 LFVDPLSRA-MYSSDGPDFEFVQQKRKEGL 840 L +DP++ A + + D + V+ E Sbjct: 752 LSLDPIALAFVAAGSKDDIQRVKALVHEHQ 781 >UniRef50_B5UW44 TrsE protein n=1 Tax=Bacillus cereus AH1134 RepID=B5UW44_BACCE Length = 631 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 96/608 (15%), Positives = 208/608 (34%), Gaps = 75/608 (12%) Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 I + Y + LD + L+ + ++ DY+ LG + A N A Sbjct: 7 IFKKKEPEYIESMMLDNSTFLD--IIAPD-SIQEHEDYMRLGGNYIRTLAIAHFSNDIRA 63 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 L + + +N+ P + D+ ++ ++ L++ K+ Sbjct: 64 NF-----LEKLHNINANVSVIHHIEPTPVEGM--IKYLDRAAVEYKSQMRDSKLKESEKS 116 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 +E K+ + + L S + + + I N + + + Sbjct: 117 V-------IENRLKDTMIMIEDLTSSDGVMFNEHMLINIQAP-NVKELNRITHLVKTMIS 168 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 ++ + I+P + F + LP K L + + + +++ L P T Sbjct: 169 RH-MKAITPNLRMLDAFNSALPLG------KNLVKELTYRNFSAESLSALFPFDECELFT 221 Query: 453 PAGLLAPT--YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 G++ N + +D N N V G SG+GK+ + + + Sbjct: 222 DKGIIKGKNLKTNSVVIVD----HDALLNRNEFVVGPSGSGKSTYLWGDMMRRWEQRVKI 277 Query: 511 VVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANIT-----DID----------QSAE 552 D + + +GG ++ + NPF I D + + Sbjct: 278 RSVDPKGEFGYKFKKLGGTWVKISPMNDHIMNPFEIIATNIPRDENGQPIAASLLHKKIS 337 Query: 553 RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL-------------AKENRARIDDVVDF 599 ++ ++M + N +V LL +A+ ++ + + D+ + Sbjct: 338 NLKTMFTLMYNDLKN-QQVALALLEKAIVKTYENFDINWDTDFTKKKPTDYPILGDLYEL 396 Query: 600 LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 + + + + L + +L Y G+Y + N ++ ++ ++ Sbjct: 397 I------GKLIKENSEYEPLTGLYQVLYPYV-EGSYSRAING-HTNVDLSNDLIDFDILE 448 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 L+D L M++++ ++E + ++ +DE L D +N EF+ Y+ Sbjct: 449 LKDDKELQKVAMYNILTFLEADAIKDLDVVQ--VYVDEAHILSDPRNPLAMEFLSNMYKL 506 Query: 720 ARRHTGAYITITQNIVDFDSDKASSA--ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 R G + TQ I DF S + S A NS K+ L S E + + F Sbjct: 507 VRSFKGGVTSATQQIGDFLSAQEGSKNHGEAVILNSVTKLYLPMSKNELDTIMKKTSETF 566 Query: 778 LPLQRDMI 785 ++ ++ Sbjct: 567 SEEEQKIL 574 >UniRef50_C9L0W6 Bacteroides conjugation system ATPase, TraG family n=3 Tax=Bacteroides RepID=C9L0W6_9BACE Length = 814 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 82/553 (14%), Positives = 200/553 (36%), Gaps = 39/553 (7%) Query: 332 TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 Y ++ +++ Q + + ++ + LN+ +D+ + + F Sbjct: 275 GRYREFDKAIKSRYDGLASYEQEIINEENVLCKTHLNVLLL-EDDETILNRQTEQVKMIF 333 Query: 392 RKNGFELISPRFNHMRN-FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 GF+ P + + N F+ + L + + + N +D Sbjct: 334 TNAGFKYYIPSYEGLYNIFIGSI-IGRENNLNPDYLFLSDLHSSLCMGI-NYSTFRSDKE 391 Query: 451 LTPAGLLAPTYRNQ-LAFIDIFFRGMNN-TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 G+L Q D++ NM + ++G GK+ +I+ ++ Sbjct: 392 ----GILFNERLYQTPIRKDVWDADKKRIPARNMIIVASTGGGKSVTSLNIIQQNIEQNY 447 Query: 509 FAVVFDMGDGYKSLCENMGGV--YLD---GETLRFNPF--ANITDIDQSAERVRDQLSVM 561 +V + G + L + ++D L NPF A ++ + + + + Sbjct: 448 KQIVVEFGKSFYQLSQLYPDRSLHIDYDGSSPLGINPFYTAGKQPDNEKIKTLVNLVLKF 507 Query: 562 ASPNGNLDEVHEGL-LLQAVRASWLAKENRARIDDVVDFLKNASDS-EQYAESPTIRSRL 619 +++ + + L + + + + D +++ + + Sbjct: 508 WRSKAIMEDTKQVVSLTKIICRYYEDIPDGHCFPDFYRYVQREGKKLYERLNILPEYFDI 567 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEP--SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 D + + ++ G Y P + + +V EL ++ P L+ +M L Sbjct: 568 DSFLHVCSEFMPGGFYENV-CKPSPLENDMQNRDFIVFELTKIKKDPFLISVIMTILFDT 626 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG----YRTARRHTGAYITITQN 733 IEN++ + R+++ + + DE K+ G I Y+ R+ GA TI Q+ Sbjct: 627 IENKI-LSDRSVRGMLIFDEYAESQSIKDTFSGADIHSTVAFCYQKLRKENGAVGTIVQS 685 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ---FLPLQRDMIGKFGA 790 + ++ + + N+ +L + + + + + + + L + + F Sbjct: 686 LAQLPDNEYT---KGIIANTQLLYVLPANEIVYDQTVEAFHIKNRSHVNLMKSIRNDFSG 742 Query: 791 AKDQWFSSFLLQV-ENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVW-- 847 + +S ++ +++++ RL + P + +DG + +Q+ KE S+ A+ Sbjct: 743 VRP--YSEIFIRFMDSYATVVRLELSPEKLLAFQTDGEKWNKLQEIYKEAGSMETAIEKY 800 Query: 848 -QLAWKKSGPEMA 859 QL K EM+ Sbjct: 801 KQLKQKSYETEMS 813 >UniRef50_Q7WZM0 Putative mating pair formation protein n=1 Tax=Stenotrophomonas maltophilia RepID=Q7WZM0_STEMA Length = 820 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 96/664 (14%), Positives = 211/664 (31%), Gaps = 98/664 (14%) Query: 202 AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 A ++ + +++ + + S L + + ++ ++ + E Sbjct: 202 ADELVNTLRCIVSGESMEVALPECGMYMDSWLFGEDLYAGTTPRLGDKFIGVIGIEG--- 258 Query: 262 STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTH----- 316 F P ++L+ ++ P+ + + D+ + Sbjct: 259 -------FPARSYP-------------SILSMLNEMALPYRWSNRFIHLDRHEAEFALGR 298 Query: 317 --SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 S+ K + ++ + SG S+ Y I + Sbjct: 299 YVSKWKQKIRGFVAQMTNKQGSINTDALSMTQQAESAVNEVRSGDSAYGYYTSCIVLMHE 358 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 D A + + + + R+ F N M +L + A + + L Sbjct: 359 DPAWVAAK-ARLVQKALRRIRFAGRIESINCMEAWLGSIAGHAHANVRRPL--------I 409 Query: 435 ESFNVANLMPLVADN------------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 + N+++LMPL A +P ++ T + +++ + +T Sbjct: 410 STRNLSHLMPLSAPWAGLATNPCDLYPKGSPPLMMTATTGSTPFNLNLHVSDVGHT---- 465 Query: 483 AVCGTSGAGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---F 538 + G +G GK+ L+ + + FD G L MG Y G F Sbjct: 466 LIFGPTGGGKSTLLATIAAQFQRYPNSSVMAFDKGRSLLPLALGMGMHYDIGSEEGGPQF 525 Query: 539 NPFANIT---DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD 595 P ++ DI + E + S+ ++ + + +A+ + L K++ + D Sbjct: 526 CPLQHLENAADIAWAQEFIEMCYSL--QAGEDMVPTQKQAVYEALLS--LQKKDHRSLTD 581 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 V L +++ L+ YT +G G ++ L+ D V+ Sbjct: 582 FVSDLP------------------EDLRAALNYYTISGPMGYLLDAQTDGLK-DTPFNVI 622 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEK 715 E+ L L ++ Y+ R ++ + + ++DE W L N ++ Sbjct: 623 EVDELM---KLGDKASLPVLRYLFRRFEKSLKGQPAMLILDEAWMALG--NPVFKAALKM 677 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 + R+ A + TQ++ D + R + KI L + Sbjct: 678 WLKELRKANCAVVLATQSLSDAANSGILDVLR---ESCPTKIFLP-NKDALQDTALYKSF 733 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQK 835 + +I K + ++ S L + RL + + A SD ++ Sbjct: 734 GLNEQEIKLISKAKPKAEYYYKSALGSRVFNLRLGRLALA-FTAA---SDKVSIARIRAL 789 Query: 836 RKEG 839 K+ Sbjct: 790 HKQH 793 >UniRef50_Q5DY65 VirB4 ATPase n=1 Tax=Vibrio fischeri ES114 RepID=Q5DY65_VIBF1 Length = 817 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 127/854 (14%), Positives = 277/854 (32%), Gaps = 102/854 (11%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGA-----NESIVEALDHMLRTKLPRG 93 + +PY + +S L D G +L+ ++G + + L L T Sbjct: 15 SLAHYIPYSSHLTDSILITTD---GDLLQMFRLSGVAFETKDNEELSLLHQRLNTLYKGL 71 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 + L + ++ ++++ + A + + +F + Sbjct: 72 SESDVSLWT-HVIRRKVKHTINGEFNQHFAAHFDAVYNAQFGEEIMTNEFYVTVIQRSTD 130 Query: 154 TLRHY-RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVD----AQAFIDI 208 L+ R + + ++ A E+ +L+K S S+T +T + + Sbjct: 131 RLKKLNRNIDAIKARLVERIDA-FTEVTDLIKNNLESYHPTSLTCKTNQQGTVLSEPLTV 189 Query: 209 VGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILN 268 + ++ H +++ ++ + +K+ +D + L N +ST Sbjct: 190 LNYLLTHEWVNVHKPTGEIKHAIG--------NAWIKIGSDTIEL----NSVSSTHYAQG 237 Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 + ++ + LLN L F+LT + + + + + Sbjct: 238 IDIKEYASRSY--------NGLLNGLLYSEFEFVLTQSFSLYPRKIAAKFIKTQKRRGKS 289 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + + ++ + L G ++ Y ++ F D+ + + + Sbjct: 290 SGDGAI--------TQIQDLDQASNDLLDGHFAMGEYHFSLLVF-GDSIDNVRQYRSEAQ 340 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA- 447 S + + + F LP G V S N A+ P Sbjct: 341 KSLSHSELLCVPIKIATDAAFFAQLPANWGY--------RPRVVGLTSRNFASFSPFHNF 392 Query: 448 ------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV------CGTSGAGKTGL 495 NP A T + + + + N+N V G +G GKT Sbjct: 393 LIGKKEGNPWGDAVTRLKTLSGHPFYFNFHYTLTGDDNFNEKVAGNTRMIGMTGTGKTVA 452 Query: 496 IQPLIRSVLDSGGF----AVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDID 548 + L V FD G + + +GG YL +G+ FNP Sbjct: 453 LGLLYCQAQKYAQHSPFSTVFFDKDRGAEVMIRALGGNYLRVQNGKQTGFNPLQMNPTPQ 512 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQ 608 + R ++ S L + E + QAV ++ R+ + + + E+ Sbjct: 513 NISFLKRWVRQLVESKQHPLTTLDERSISQAVDTVMRMEKPLRRLTLINQNIAVGTSKEE 572 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM-VVLELGGLEDRPSLL 667 R + + LD++ G + F++D L ++ + ++ D + Sbjct: 573 ---------RENSIKARLDKWCQGGEFAWVFDNDVDLLDFNSATNIGIDGTEFLDNHDIR 623 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 + L+ ++ + + V+DE W+ ++ + +F+ T R+ G Sbjct: 624 TPICLYLLHRMDEVI----DGRRFFYVMDEAWKWVN--DDAFSDFVGNKQLTIRKQNGFG 677 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDMIG 786 + TQ S S A + S +I L AK+++ D + ++ Sbjct: 678 VFATQLPS---SLLGSPQGAALIESCSTEIYL---PNPKAKHDEYVTDLGLSEKEFSILK 731 Query: 787 KFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPDFEFVQQKRKE-GLSIH 843 +FG L++ N S+ L + +S + S+ + + KE G + Sbjct: 732 EFGEKSRL----CLIKQGNQSAICSLTMPGMSNELTLLSASSDELPLFDESIKEVGENPI 787 Query: 844 EAVWQLAWKKSGPE 857 + + K + Sbjct: 788 DWIPIFLQKVREEK 801 >UniRef50_A2UVP9 Plasmid transfer protein n=1 Tax=Shewanella putrefaciens 200 RepID=A2UVP9_SHEPU Length = 268 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 118/279 (42%), Gaps = 23/279 (8%) Query: 583 SWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 W ++ + V+ S+ + E+ L + G YG F+ Sbjct: 1 MWNDLGQKSTVTIFVERCLAHSE-----------DYMREIGKQLKIFAEGGVYGHLFSDK 49 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 P++ D ++VV+EL L++ L + V+ +I I++++++ K L +++E W+ + Sbjct: 50 RPAINFDGRLVVVELEELQNDLHLQLVVILGIINQIQHKIFQGGTERKSLFLLEEAWQWM 109 Query: 703 DFKNHK--------VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 VGEF++ +R R+ + + I+Q+++D + + +A N+ Sbjct: 110 GGDKDGDKGALIEFVGEFLQAAFRKFRKVSASGGVISQSLLDATQN---AVGQAILANTD 166 Query: 755 YKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV 814 +K+ L Q K Q + + K +S ++ + S RL + Sbjct: 167 WKLFLGQDPSSVDKVKNTKAFTATDAQFNQMKSVHTKKGA-YSEIMIFHKQMSEICRLEL 225 Query: 815 DPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 +P + ++S+D D E +++ R G + EA +K Sbjct: 226 EPETLMIFSTDADDRELMKKYRSLGNGVKEAARLSVIEK 264 >UniRef50_B0S4N6 TraE like protein n=1 Tax=Finegoldia magna ATCC 29328 RepID=B0S4N6_FINM2 Length = 938 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 115/746 (15%), Positives = 252/746 (33%), Gaps = 85/746 (11%) Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG-----E 211 + R FI+Y D+ + +K +++ +++ + ++ + Sbjct: 207 NRRKFITYTV-----LADDLEDATEKLKRAETAIKERLKDIYPINSDDVVKVLSAKERLK 261 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + D + + D + F + AD+ + E GR + Sbjct: 262 LFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADFTDKSIFEWGRY-------YGQ 314 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK--- 328 R + + +L +I+ + + + +D+ K L +M+ EK Sbjct: 315 VRFIKDIPTEMTDEFIQDL--TAENINMICSIHINPIPKDETKQMIRTKLSFMNTEKFGE 372 Query: 329 ------KSKTSYAKWFP-SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 K + ++ S+ + +E +++ ++ + I + + + Sbjct: 373 KRKLSGKGLGASDEFVAQSLIENLEEAKKIQNKIQEENEKMFVTTFCIMTMA-ETLDELM 431 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 + I R +G L + + F T LPF V ++ S ++ Sbjct: 432 DNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFG--------YNRLDVSRQLLSKSLGI 483 Query: 442 LMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 P + P G + + I ++ N + + T G+GK+ + I Sbjct: 484 FEPFSTQDIYQPGGFVYGVNPTSKSII--LLNRLSRKNPSGFIMATPGSGKSMAAKHEIA 541 Query: 502 S-VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQSAERVRDQ 557 + L + V+ D Y +L + G + + NP I+ Sbjct: 542 NIFLSTDDDIVIVDPESEYGTLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKNDFVQN 601 Query: 558 LSVMASPNGNLDEVHE--------GLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQY 609 P+ ++ + + +S L E + ID V L + E Sbjct: 602 EMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPEEISTIDVVGRKLYKRCEKENR 661 Query: 610 AESPTI---------RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 + + + +L Y +G+ + S E ++ +++ +L + Sbjct: 662 VPTLNLLYDTLVKEADYTSTRLAQVLQIYVNDGSLNIF--SKESNINIKNRVISFDLNSV 719 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKL-NVIDEGWRLLDFKNHKVGEFIEKGYRT 719 +L + ++ + NR+ + + K+ IDE + +L+ N F+ + ++ Sbjct: 720 --TQNLKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLN--NEYSTSFLYQLFKR 775 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS-YKIILKQSAKEFAKYNQLYPDQFL 778 +R++ G ITQNI D + AR + N++ Y +L QS + A +LY Sbjct: 776 SRKYDGVITGITQNISDML---RTENARTMFNNATGYVCLLNQSEDDLATLTELY--GLS 830 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV--DPLSRAMYSSDGPDFEFVQQKR 836 Q+ I K L+ E + + D + +SD D +++ R Sbjct: 831 KEQQKYIYNASKGKG------LIMTEGVTVPFENIIAKDSKLYKLTTSDPND---IKRYR 881 Query: 837 KEGLSIHEAVWQLAWKKSGPEMASLE 862 E I E +L + + +E Sbjct: 882 AEDEKIKEDFDKLMEEYKDNKSEDIE 907 >UniRef50_C6N556 Type IV secretory protein VirB4 component n=3 Tax=Legionella RepID=C6N556_9GAMM Length = 933 Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 159/956 (16%), Positives = 311/956 (32%), Gaps = 128/956 (13%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFM-NDT-TM 62 ++ V+QAVN L+ + + L + D+ E+ LF+ ND ++ Sbjct: 3 MKRVSQAVNWLLGEGSKNPPKMATIKKGYAKQEHSLAECLAFVDFCDETNLFLLNDGVSV 62 Query: 63 GFMLEA--IPINGAN----ESIVEALDHMLRTKLP--RGIPLCIHLMSSQL--------- 105 G E IP + +++ + +P + P + + S Sbjct: 63 GSGFELGDIPAEATSPEHLQAVFSKIRDTFANVVPLHQEDPWVMQMYVSDEYSLDPVLKH 122 Query: 106 ----VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVF 161 + + + + FN + R + G + + YR + Sbjct: 123 IQSAIAPELLKTQFTEDYLNRLQDLFNKMVRPQGLFLDPKTGAAFRGRRRRIRVLFYRRY 182 Query: 162 ISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLY 221 K +LE E++ I A L +T + + +A+ + N NP Sbjct: 183 ----QHLKTTREQAVLEHEDVSAQIIAKLISPGLTLKRLTGKAYYSWWVKWFNPNPALTE 238 Query: 222 PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN---STARILNFHLARNPEIA 278 QL Y + + + + + ++ E Sbjct: 239 GDSEQLL--QRFPYPYGNKPAGFCFPQNIFFSPVVSDEKGFIFDEIKHRVLYVDGLKEAP 296 Query: 279 FLWNMADNYSNLLNPELSI------SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 + + NP+ I TL++V + + M +EK Sbjct: 297 AIG-LISREKPQANPKHRYALLDKLPEGSIYTLSVVF----SSDEALDAHLMRIEKGIIG 351 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE-TALEVEQDILNSF 391 K PS + + R L +G +++N + + +E T ++E+D+ + F Sbjct: 352 ISLK--PS--EVRNDIKTARDELSTGNRL---FWVNQAVYYRGKDEQTLAQIEKDLHSLF 404 Query: 392 RKNGFELISPRFNH--MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN 449 LIS F+ + ++L LPF + K + + +A L+P+ N Sbjct: 405 IDAKMPLISSAFDVHPLNSYLNGLPFSFVPSFAR--KHLCYDRLVFASELAALLPVYGRN 462 Query: 450 PL--TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-S 506 + D+ + N +MA+ SG GK+ +I S++ Sbjct: 463 QGAKHLPCFTFFNRLGEPVLFDVLHHDFVSQNSHMALFANSGGGKSVATGWMINSLMATK 522 Query: 507 GGFAVVFDMGDGYKSL---CENMGGV----YLDGETLR---FNPF--------------- 541 V+F+MG+ + + + MG L + + NPF Sbjct: 523 NARIVLFEMGNSFDRMLVHAQAMGKKTKQLLLSNKKSKAVPLNPFCEAYKAIPEISDNLS 582 Query: 542 ---------------------ANITDI---DQSAERVRDQLSVMASPNGNLDEVHEG--- 574 A I D+ ++S + + L + + +E E Sbjct: 583 EEKAALLAQKMVDLQSHLSEKAEINDLNCDEESRSYLAELLLALRTMITEANEEEEKKFS 642 Query: 575 -----LLLQAVRASWLAKENRARIDDVVDF-LKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 LL++ + + L + + L + + E P + R+ EM L+ Sbjct: 643 LSDETLLIEVLSDAVLTSFKDEVPQMLTEHVLAAFARRVELEEVPRKKDRILEMHDRLNS 702 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PR 687 Y N ++FN D + +++ ++D L VM SL+ I T Sbjct: 703 YVINSNKSRFFN-VPTEPLGDFDIFHIDISAIKDDKGKLALVMVSLLPRILAMAEATQND 761 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 N IDE L F+ + + AR+ + +TQN+ D +S+KA+ Sbjct: 762 NRPTFLFIDEAH--LQFQIDVIVSSCLLAAKVARKLGLWLVPVTQNVADMNSEKATK--- 816 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHS 807 I+L KE A Q Q P Q +I + K ++ +L + Sbjct: 817 -ILSLIETWILLGLDEKELADVKQF--KQLTPEQEALIRDIDSQKG-LYAEAVLLGSRYQ 872 Query: 808 SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEA 863 R+ A+ ++ + ++ + +A +A + +LE Sbjct: 873 GLFRVIPPRYLLALLMTEKSEKASRHLLEEQH-DVLKAAEIVAERLENKTHNALEE 927 >UniRef50_C5D061 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Variovorax paradoxus S110 RepID=C5D061_VARPS Length = 835 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 131/802 (16%), Positives = 240/802 (29%), Gaps = 124/802 (15%) Query: 74 ANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVG---DRIEYGLREFSWSGEQAERFNAI 130 A++ + + L L ++S + I + +G F Sbjct: 53 ADDEDINSWHERLNVLL--------RNIASPNLALWTHVIRRREMAYP-AGRTTPGFADE 103 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHY---------RVFISYCSPSKKKSRADILEMEN 181 Y + A + + + L + R R+F + +RA++ + + Sbjct: 104 IEQRYRRKMAGERLMVNELYLSVVFRPQPTRIGNAALRLF---KRADPEGARAELRDALD 160 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED- 240 +R L A + D +A I N S + L + + Sbjct: 161 ACSKLRQELLAA---LERYDPEAL-GIYRLQGNDGLFSSLVEFHGLLVNGEWQRMPLPRA 216 Query: 241 --SFDLKVRADYLTLGLRENGRNSTARILNF-HLARNPEIAFLWNMADNYSNLLNPELSI 297 + L + E + RI F + P + + L+ Sbjct: 217 PLNEVLATTRPFFGNEAMEYRAGTQTRIGAFLGIKEYPTPTAP--------GMFSALLTA 268 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 PF+LT + A D+ + A +A+E + L S Sbjct: 269 PFPFVLTQSFTFL--------AKSTATDMMSRQHHRMAAAGDLAVSQAEELKDALDDLMS 320 Query: 358 GQSSVVSYFLNITAFC-----------KDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 + V + ++ + + + G + Sbjct: 321 NRFVVGDHHFSLHVLADTYDGLSEAEGRPRLKQLNDNVARARYLLGDAGMVVAREDLALE 380 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-------ADNPLTPAGLLAP 459 F LP G K S N A + P N A + Sbjct: 381 AAFWAQLPGNFGYRSRK--------APVTSRNFAAMSPFHNFPTGRATGNYWGDALTMFT 432 Query: 460 TYRNQLAFIDIF-------FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAV 511 T + + G ++ G G GKT L+ + ++ + V Sbjct: 433 TRAGSPYYFSLHASDPRSRDGGSRRDVGHITGVGPVGTGKTTLLGFCMVAICNRLDATQV 492 Query: 512 VFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLS--VMASPNG 566 VFD +G L +GG YL +G NP I + E +R L VM +P Sbjct: 493 VFDKDEGLHILVRALGGQYLPLKNGAPTGCNPLQLDDSIADNVEFMRHWLRRLVMRTPGE 552 Query: 567 NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLL 626 L E L QA+R + + + R+ + FL +A L Sbjct: 553 TLTVRQEDDLDQALRGTLKLERSFRRLSRLAAFLDITDPEGMHA--------------RL 598 Query: 627 DQYTAN--GTYGQYFNSDEPS---LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENR 681 ++ A+ G Y F+++ L +V ++ D + + L + NR Sbjct: 599 RRWCASEHGDYAWVFDNEHDHVAPLLARHALVGFDVTDFLDNEVVRAPLTLYLFHLV-NR 657 Query: 682 MYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDK 741 M + +DE +LL + +F + G T R+ T TQ+ Sbjct: 658 MV---DGRPLVCWMDEFAKLL--SDPAFAKFAKNGLETWRKKNANIATFTQSTSHVLD-- 710 Query: 742 ASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP--DQFLPLQRDMIGKFGAAKDQWFSSF 799 S ARA + KI+ ++ +Y + + D+ L + I + F Sbjct: 711 -SGIARAIVEQTPTKILFPNPEADYDEYTRGFNLTDREFALIKQEI-------EPGSRQF 762 Query: 800 LLQVENHSSWHRLFVDPLSRAM 821 L++ + S +L + A+ Sbjct: 763 LIKQNHVSVVAQLDLHGFDDAL 784 >UniRef50_A4ITY7 TrsE n=7 Tax=Bacillaceae RepID=A4ITY7_GEOTN Length = 617 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 88/616 (14%), Positives = 190/616 (30%), Gaps = 75/616 (12%) Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + ++ + ++ + Y+ G + + Sbjct: 5 LPFFRKKKEESLEESYYNANEHILNLLSPD-SIEEKESYVRSGTNYTRTLVVVEYSSIIV 63 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE-DQVKTHSEANLKYMDLEKKS 330 + L +++DN S + + E D + + +K Sbjct: 64 QEY--VQRLNDLSDNIS---------------VIQYITEYDSSEVRRHLSESIKQNSQKL 106 Query: 331 KTSYAKWF--PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE--TALEVEQD 386 + Y + + L +L + + + I + E + + Sbjct: 107 YSKYVNDAGKAEAQAQIDSARMLLHQLSFKNEKMFMFQMLIHIVASNLKELDALTQQVKA 166 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 I+ F K ++P F + LP GK L + + V+ P Sbjct: 167 IVGPFAKT----LAPTTRMKDAFDSFLP--IGKNKVYDL----TYRPMNAEAVSYFFPFH 216 Query: 447 ADNPLTPAGLLAPTY---RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI-QPLIRS 502 + G++ + +D N + V G SG+GK+ I Q ++R Sbjct: 217 ENEIFDEKGII-KGRNMTTGNVVIVD----DDLLLNRHEFVIGISGSGKSTYIFQDMMRK 271 Query: 503 VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANI------TDIDQSAER 553 + G +V D + + +GG ++ NPF + + + Sbjct: 272 YM-LGRRIIVIDPKGEFGEIFRTLGGEWVKISLKGGNIINPFDIPKNQHGTEEGNPLIAK 330 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE-------------NRARIDDVVDFL 600 + L++ + ++ E +L + + + + ++D FL Sbjct: 331 ISTLLTMFRLMYPQMTDLQEDVLSKLLIELYAKFGITEETDVNALTLTDVPIMEDFYHFL 390 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 + ++ +P + + L Y G + + FN ++ +V ++ L Sbjct: 391 EEIKET-----TPEEYEHVRDFHTTLHAYAK-GMFAKVFNG-HTNVDVSNPLVAYDIFDL 443 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 ++R V F+L+ +I + R+ IDE + D K E++ + Sbjct: 444 QNREKAQRVVYFNLLSHINYDILNGDRH-PTQVYIDEAHIIADPKVPLAMEYVYFMMKVL 502 Query: 721 RRHTGAYITITQNIVDFDSDK--ASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL 778 R TQ+I DF S K + A + ++ L E + QF Sbjct: 503 RSFNCGVTPATQSIKDFLSAKDDKRNYGEAVISQAIQRLYLPMQEVEINFLEKELGHQFS 562 Query: 779 PLQRDMIGKFGAAKDQ 794 +R + KD+ Sbjct: 563 EEERTTLTVVEGRKDE 578 >UniRef50_B9NXT4 Putative VirB4 protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NXT4_9RHOB Length = 758 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 104/681 (15%), Positives = 225/681 (33%), Gaps = 80/681 (11%) Query: 168 SKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQL 227 ++ R + +++ + + +L + + ++ G ++N + Sbjct: 127 VGEERRELLDQLDGVFTTLAGTLGDDRVRRLRISEGKWLGYYGMLLNGRYQPI----VHA 182 Query: 228 DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY 287 + + + ++ + ++ + + + F L PE AF Sbjct: 183 NIAEPIAFNMPQEDVLFQGKSARIDTVTGQERG-----VRVFSLKSYPEDAFPG------ 231 Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 + L + ++T + + + + + ++ + + + Sbjct: 232 ---IFDSLDLPVDMVITQSYLPLSRSQAQEKERVQSGRMRSAGD--------KAKSLEDD 280 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 + SG+ S + L+I F + E+ I+ S + G + + Sbjct: 281 LSIFADGIASGRLSSGKHHLSICVFGTEA--ELKTAERHIIGSVQIAGGTIKRESLSARA 338 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMP--LVADN-PLTPAGLLAPTYRNQ 464 + P +++ +F ++ P L A P PT + Sbjct: 339 VYFAQHPGNFAFRTRQEMVTDEYFADTVAF---HMRPRGLPASKLPWPGPLATFPTTQGD 395 Query: 465 LAFIDIF-----FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 + + N + + V G +G+GKT + L S + G + FD Sbjct: 396 RYDLSLHLPKTSDDAENLPSGHTLVLGPNGSGKTVIAMLLATSAVAQGARIIAFDKDHAM 455 Query: 520 KSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLL 576 ++ +G Y GE NPF TD + + + ++ + S + L + + Sbjct: 456 EAPLRALGARYTRVRVGEPTGMNPFRTETD-KEGQSWLSNWVTALLSYDDPLSAEQKEEI 514 Query: 577 LQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYG 636 + +A+ D + D K D + ++ + G Sbjct: 515 TRGCQANAKLPPPLQTFDSLRDRFKAFDDG-------------RALFKRAGEWASEGRLE 561 Query: 637 QYFN-SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVI 695 F E D + +V ++ + D + +A + +I IE R + + VI Sbjct: 562 WMFGAGGEDPFAADDRHLVFDISEVLDDELVRLAWISYVIRQIER---RCAEKVPTIFVI 618 Query: 696 DEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSY 755 DE W + N E ++ GY T R+ A + +TQ S +AS ++ N+S Sbjct: 619 DEAWVI--AGNEYGAEILKNGYTTFRKLDVAMMMMTQIPDHILSSRAS---KSILENTST 673 Query: 756 KIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 K+ A + Y ++ + + A + + +L + + S L VD Sbjct: 674 KLFFPSRAGDEDDYRKMGLND---------AELSALRAHFGDRVMLMKKGNESVW-LDVD 723 Query: 816 -----PLSRAMYSSDGPDFEF 831 PL R + SDG F Sbjct: 724 LSTLGPLLRVLSGSDGKAFPD 744 >UniRef50_B1Y1W2 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1W2_LEPCP Length = 830 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 102/572 (17%), Positives = 177/572 (30%), Gaps = 66/572 (11%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 +L+ L + FI T + + + L+ L V + E Sbjct: 275 GILDTLLYEASEFIETQSFSILPRRDAMRALELQRDQLIASDD--------VVSSQVAEM 326 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 LG GQ + Y ++ F D + Q I + ++ Sbjct: 327 DVALNELGDGQFCMGEYHYSLVVFGDDVADAGRRASQAIGAVGEASSLQMAPVDLVADAA 386 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMP--LVADNPLTPAGLLAPTYRNQLA 466 + +P + + + P NP A L T Q Sbjct: 387 WFAQMPGNWSWRPRDAKLSSRAFA---ALACGHNFPRGKRDGNPWGEALALLRTPSGQPF 443 Query: 467 FIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLI--RSVLDSGGFAVVFDMGDG 518 ++++ + N + G++G GKT L L+ V+FD+ G Sbjct: 444 YLNLHSSPEGEDSADKKLPGNTLIIGSTGVGKTTLEMFLLVLTRKWQPAPRLVLFDLDRG 503 Query: 519 YKSLCENMGGVYLD---GETLRFNPFANITDIDQS---AERVRDQLSVMASPNGNLDEVH 572 + +GG YL G NP ++ + +R ++ A P L Sbjct: 504 CEIAVRALGGEYLAFEAGRPTGCNPLQREPTPERLQFWEQLIRTCVATTALP---LLPSD 560 Query: 573 EGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTAN 632 E + AVRA + + R V L ++ Y L ++ Sbjct: 561 ERAIADAVRAVAMMPAHLRRFSTVRQNLPKTGENSLYE--------------RLGRWCDG 606 Query: 633 GTYGQYFNS--DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLK 690 G G F+ D+ L ++V + D P + VM L+ M + Sbjct: 607 GALGWVFDQAPDQLGLLSATRVVGFDTTEFLDLPEVRTPVMMVLL----QMMDEWVNGER 662 Query: 691 KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAW 750 + VI E W+ LD +F ++ +T R+ G I TQ+ D R Sbjct: 663 LIYVISEFWKALDHA--VFSDFAKQKQKTIRKQNGLGIFDTQSPSDVLRH---PIGRTMI 717 Query: 751 GNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH 810 S KI L + Y D F L + Q FL++ S+ Sbjct: 718 EQSVTKIFLA----NPEAVHDEYVDGF-GLSEAEYETVRSLSAQGGRRFLVKQGATSAIC 772 Query: 811 RLFV----DPLSRAMYSSDGPDFEFVQQKRKE 838 L + D ++ ++D + + R + Sbjct: 773 ELDLSGLEDFITVLSATTDN--VALLDELRSQ 802 >UniRef50_A8PL22 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Rickettsiella grylli RepID=A8PL22_9COXI Length = 809 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 115/823 (13%), Positives = 250/823 (30%), Gaps = 122/823 (14%) Query: 40 FSRLLPYRDYNQESGLFMNDTT---MGFMLEAIPINGANESIVEALDHMLR---TKLPRG 93 FS LL Y + + G+ +N M + + A+ ++AL ++ L G Sbjct: 13 FSDLLNYAHFVDD-GVIINKDGAFLMAYRFRGPDLYSASRGQLDALTVVVNRMAGILEDG 71 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAAT----QFPLPEGM 149 L ++ + Y + AE + R Y K QF Sbjct: 72 ----WMLHVDEVRIPSLNYSAAAVF-PSKVAELIDEERRRTYEKLGNHYENLQFLSFVWK 126 Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIR--ASLQGASITTQTVDAQAFID 207 ++ R + +K + +K + L A + + + + + Sbjct: 127 FPLSVVKKTRHWF-IEGLGNEKDHDLTYLLHCFLKNVDRCVGLLRAQFSLEKLSSIDLLS 185 Query: 208 IVGEMINHN--PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + I P S+ P+ LD L + V + +V + + L Sbjct: 186 YLKLCITGEIAPASMPPEGCFLDVV--LASRSVVAGYHPRVGENTIFL------------ 231 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 + + + + P + + + +E +K Sbjct: 232 ---LSIIGYLNEETIPGLLEELGTY---------PLVYRWSNRFIPFSEATAEREIKRYV 279 Query: 326 LEKKSK-------TSYAKWFPSVEKEAKEWGELRQR------LGSGQSSVVSYFLNITAF 372 +K A W K + ++ Q+ L + Y+ + Sbjct: 280 RNWNNKIRGFSGVLKEALWGKVSNKVDHDAMQMSQQAMAASALNRSARTRFGYWSSALVL 339 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 + ++ +D+ ++GF + + +L LP L + Sbjct: 340 MHPDIPLLIQAARDLTAYLEQSGFSCVQEDIHAFDAWLGTLPGHGSCHLRRVFIN----- 394 Query: 433 RAESFNVANLMPLVADNPL-------------TPAGLLAPTYRNQLAFIDIFFRGMNNTN 479 S N+A+++PL +P A T + Sbjct: 395 ---SMNLAHVLPLQTVWTGATYSSTESLLPACSPPVFYAETSGKTPFRFHM----DVEDV 447 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD---GET 535 + + G +G+GK+ + LI L G VFD + L + G + D ET Sbjct: 448 GHQVILGPTGSGKSTYLGFLIAQFLRYHGAQIFVFDKDYSQRGLTAALEGYHYDIGQSET 507 Query: 536 LRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRA-SWLAKENRARID 594 L F P +++ + ++ ++ N NL + V + + ++ + Sbjct: 508 LAFCPLEDLSSEAKQLRAIQFIEDLVFLQNVNLTPEIRHAIGSVVASLAENNHKHSRTLT 567 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 ++N + L+ YT G + + ++ +++ DA + Sbjct: 568 VFRSEIQNEV-----------------VRSALNYYTLEGQF-KLLDASSNAIQTDAYLQT 609 Query: 655 LELG-GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI 713 E+ L+ +P + + ++ ++ I + R +L +++E W + + Sbjct: 610 FEMSWVLKQKPEIAIPLLRTIFDRITTSLEDNHRQGPRLIILEEAWLYVSH--PLFVRQL 667 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDK---ASSAARAAWGNSSYKIILKQSAKEFAKYN 770 + +T R+ + TQ++ D + + KI L + + Sbjct: 668 KDWLKTCRKKNARVVFATQSLADLYDPSNKGLTETTATILESCPTKIFLPHPSMDAEIKT 727 Query: 771 QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 Q ++I + Q + L HRL Sbjct: 728 LYQKIGLTERQLEII--MHSIPKQHY---YLTSPEG---HRLI 762 >UniRef50_Q11ZH3 Type IV secretory pathway VirB4 components-like n=1 Tax=Polaromonas sp. JS666 RepID=Q11ZH3_POLSJ Length = 850 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 111/787 (14%), Positives = 233/787 (29%), Gaps = 96/787 (12%) Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV 160 +V ++ RE G +E + I A+ F + R Sbjct: 95 TGENVVARGVDDAWRESVDDGSLSEIRHYIAIAFRPFRGTMGFFDEISSTMMDEHRSLPA 154 Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQG---------ASITTQTVDAQAFIDIVGE 211 I+ SK + I +M+ + A+ + ++ + + Q + + + Sbjct: 155 AIAKTISSKLRMEKGIEKMQGKIIGATAAFESQISSFMGTLTTLNARRLTDQELLCSLSD 214 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 +N L Y LN V + L G + + + Sbjct: 215 RVNLATPRTKVSCGPLPSY--LNTLLV-TDTLKRADGGILEF----VGATRSQFVQMLSV 267 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 P++ ++ LS+ F + D+ K + N K Sbjct: 268 KGLPQVINNEDVEAL--------LSLQGDFSVVQQYRFLDREKAKAYINDCEHHYRSSIK 319 Query: 332 TSYAKWFPSVEKE------------AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 + + F + A++ L + + + + A +D Sbjct: 320 SPMTQAFERLSGNESDSIDMGMLALAEDSSAALAELTGDGVNFGYHTMAVMAIGRDR-RD 378 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 + I + G+ ++ N + F +P + + + Sbjct: 379 LDITLKGIAGLYSNLGYGVVREVVNQVGAFCATIPGGGDSTVRTSMVSTRNLSDMSLVRS 438 Query: 440 ANLMPLVADNPLTPAGL------LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 + G L PT + + + + A+ G +GAGKT Sbjct: 439 IKSGSSQNEYLTEQLGSPQEALCLFPTTSGVPEYFNFHVGDVG----HFAIIGGTGAGKT 494 Query: 494 GLIQPLI-RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET----LRFNPFANITDID 548 L+ LI G +V D + ++MGG Y+ + + NP I + + Sbjct: 495 TLLNLLIMMWQKYRGARTIVIDKDESCFITIKSMGGSYISIDPEKARAKMNPLRWIKNPN 554 Query: 549 QSAERVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 A+ M+ N + L+ Q + + +R + + L + Sbjct: 555 SWAKVASWIEGAMSVYGNEAITAQQSTLITQVISQLATREPHRHTLGNFHAQLNGLN--- 611 Query: 608 QYAESPTIRSRLDEMIVLLDQYT----------ANGTYGQYFNSDEPSL-----RDDAKM 652 ++ L + + Y F+ E D + + Sbjct: 612 ------------QDLAARLAPFVAVAGSANTQSSGSKYAHLFDGYEDGFAAQLAADSSGI 659 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 + +++ L L V+ L + I+ + + ++EGW LL +N + Sbjct: 660 IGIDVNALLKDEKLAPCVIEYLFMAIDEMI---DGLSPTMIYLEEGWYLL--QNERFKGV 714 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 E RT R+ TQ++ D + K S+ A N +I L + + ++ Sbjct: 715 YEDYLRTLRKRRAIIGLATQSVFDIEKVKLSA---AFNDNVRTRIYLP--SAKAKSAAKV 769 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFV 832 Y D + A + + +++ + + + P A SD Sbjct: 770 YIDYLGLTAEHVDVLANAIPKRHY---MIEQDGRIRLIDVSLPPEILAHTRSDPRAKLVF 826 Query: 833 QQKRKEG 839 ++ EG Sbjct: 827 KKLLDEG 833 >UniRef50_C7H9G2 Putative TraE protein n=5 Tax=Clostridiales RepID=C7H9G2_9FIRM Length = 918 Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 95/684 (13%), Positives = 210/684 (30%), Gaps = 80/684 (11%) Query: 116 EFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRAD 175 +++ S E A + + A Q L G N + + ++++ + Sbjct: 232 QYAKSFEIAPQGDDFDDIRAEYTAILQKQLASGNNGIVKTK----YLTFTIE-ADNLKTA 286 Query: 176 ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNY 235 + + + + +D QA ++++ + + + + P R D + Sbjct: 287 RARLTRIGLDLLGYFKTMGCVAHVMDGQARLEVLHGIFHPDGE---PFRFDWDWLAP--- 340 Query: 236 QCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPEL 295 S V L G + + +I + ++ L E Sbjct: 341 --SGLSTKDFVAPSSLCFGTAKTFGLGGK----YGAVSFLQILAPELSDEMLADFLKTES 394 Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDL-------EKKSKTS---YAKWFPSVEKEA 345 I ++ L + DQ + K DL +KK+ S + Sbjct: 395 GI----LVNLHVQAIDQTEAIKTIKRKITDLDAMKIQEQKKAVRSGYDMDILPSDLATYG 450 Query: 346 KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNH 405 ++ +L +L + + + D + +K L+ + Sbjct: 451 EDAKKLLNKLQTRNERLFMLTF-LVLNMADTKQKLGNDVFQAAGVAQKYNCSLVRLDYQQ 509 Query: 406 MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQL 465 + ++ LP + + + + + NVA +P V + + Sbjct: 510 EQGLVSSLPLG--------INQIKIQRSLTTSNVAVFVPFVTQELFQSGAAMYYGINAKS 561 Query: 466 AFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAVVFDMGDGYKSLCE 524 + + R N GT G+GK+ + ++ L + + D Y L + Sbjct: 562 HNMIMLDRKQARC-PNGLKLGTPGSGKSMSCKSEIVSVFLTTADDIFISDPEAEYYPLVK 620 Query: 525 NMGGVYLDGETLR---FNPFANITDIDQSA-------ERVRDQLSVMASPNGNLDEVHEG 574 + G + NP + + + V ++ L+ + Sbjct: 621 RLHGQVIKLSPTSKDYVNPLDINLNYSEDDSPLALKSDFVLSFCELVMGGKTGLEAIERT 680 Query: 575 LLLQAVRASWLA------KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 ++ +AV+A + EN + D+ L + D + LD Sbjct: 681 VIDRAVKAIYRPYLASPCPENMPILSDLHQALLD-----------QHLPEADRVAQALDL 729 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 Y + FN + ++ ++V ++ L L M + I R+ + Sbjct: 730 YVSGSL--NVFN-HKTNVDIHNRLVAFDIKELG--KQLKKLGMLIIQDQIWGRVTQNRSQ 784 Query: 689 LKKLNVI-DEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 + DE LL K + + + ++ R+ G TQN+ D S S Sbjct: 785 GRATWYFADEFHLLL--KEEQTAAYSAEIWKRFRKWGGVPTGATQNVKDLLS---SPEIE 839 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQ 771 NS + +L Q++ + ++ Sbjct: 840 NILENSDFITLLNQASGDRKILSE 863 >UniRef50_Q6XGG0 Pilx3-4/VirB3-4-like protein n=23 Tax=Bacteria RepID=Q6XGG0_ECOLX Length = 912 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 140/874 (16%), Positives = 290/874 (33%), Gaps = 128/874 (14%) Query: 30 EVLGEMSFPQ---FSRLLPYRDY-------NQESGLFMNDTTMGFMLEAIPINGANESIV 79 E L M Q + +PY + + +S L+ MG + ++ES+ Sbjct: 98 EFLDAMKLNQCATIKKYIPYSSHIHQHVVRSPKSDLYCTWELMGTPFDCE----SDESLQ 153 Query: 80 ---EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 L ++R+ G+P+ ++ + L + S + + ++R YY Sbjct: 154 FGTNQLHGLIRSF--EGMPVTFYI---HNDRNTFTDNLHKDSGN----PYADEVSRLYYA 204 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFISYC----SPSKKKSRADILEMENLVKIIRASLQG 192 R R+F++ C +K R + + + L ++ A L+ Sbjct: 205 SVG--------------LFRRNRLFLTVCYRPFVSLEKAERKRMKDSQKLKELDGALLEM 250 Query: 193 ASITTQTVDAQAFIDIVGEMI--NHNPDSLYPKRRQLDPYSDLNYQ----CVEDSFDLKV 246 I + A + ++++ + Y L +Q V + V Sbjct: 251 LEIKSTLDTA--LSRYGARPLGTFTEGNAVFSSQLAFYEY-LLTHQWRKVRVTRTPAYDV 307 Query: 247 RADYLTLGLRE----NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFI 302 E N N T + E + +++ L C ++ Sbjct: 308 MGAAALFFSAESGQINHANGTQYFRGLEVKEFSEE--------TATGMMDSLLYAPCDYV 359 Query: 303 LTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 +T + + + L + + + L SG+ + Sbjct: 360 ITQSYTCMSREEAKKAIKRTRRLLMSADDDAV--------SQRLDLDVALDLLTSGKIAY 411 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + +I + + E+ + +I N+ G + + ++ LP L Sbjct: 412 GKHHFSIMVYSP-SLESLVADTNEISNALNNIGITPVPAEISLSAAYMAQLPGN--YNLR 468 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADN-PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYN 481 + E E + N P D P A L T +I++ + +N Sbjct: 469 PRKGELSSQNFVELAALHNFYPGKRDKAPWGDAMALLRTPSGDGYYINLHNTLADKDEFN 528 Query: 482 ------MAVCGTSGAGKTGLIQPLIRSVLDSGGF-------------AVVFDMGDGYKSL 522 + GT+G+GKT L+ G V D G + Sbjct: 529 EKNPASTCILGTNGSGKTMLMTFFEIMQQKYGREDSFSPDAKTKRLTTVYLDKDRGAEMN 588 Query: 523 CENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQ 578 +GG Y + GE+ +NPF+ + ++ ++ + ++ + NG+ + E L Sbjct: 589 IRALGGRYYRVISGESTGWNPFS-LPATKRNINFIKQLMKILCTRNGSTISPRDERRLSD 647 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 AV A + R+ + L+N E T ++ + + + L Q+ G +G Sbjct: 648 AVNAVMNDEPQY-RVYGITRMLENL------PEPATKEAQENGLSIRLSQWAQGGEFGWV 700 Query: 639 FNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE 697 F+++ + ++ D S+ + F L+ I + + + + +DE Sbjct: 701 FDNESDTFDISNCDNFGIDGTEFLDDASVCAPISFYLLYRITSLL----DGRRLVIFMDE 756 Query: 698 GWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKI 757 W+ L ++ +F +T R+ G + TQ+ + D A A +I Sbjct: 757 FWKWL--RDPVFKDFAYNKLKTIRKLNGMLVVGTQSPAEIIKD---DIAPAVIEQCGTQI 811 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW--FSSFLLQVENHSSWHRLFVD 815 + + A Y +F P D++ Q+ + + + R+ +D Sbjct: 812 LAANPNADRAHYVDGM--KFEPEVFDVVKGLDPQARQYVVVKNQFKRGDTKRFAARVTLD 869 Query: 816 -----PLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 ++ M S D P+ E + +EG+ HE Sbjct: 870 LSGIGRYTKVM-SGDAPNLEIFESIYREGMQPHE 902 >UniRef50_C8WNA5 Type IV secretory pathway VirB4 protein-like protein n=2 Tax=Coriobacteriaceae RepID=C8WNA5_EGGLE Length = 815 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 131/801 (16%), Positives = 257/801 (32%), Gaps = 110/801 (13%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E I L L P + + ++++ + + I + + R Sbjct: 85 EQIFTTLSS-LYNYFPAESSVQLTIVNTPIPRELIGKKVFFEPNDERTLGYVDEYNRILN 143 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 K L R F++Y P + A + ++ ++ I ++L Sbjct: 144 DKMCEGVSNLVR-----------RRFLTYSVP-AESVEAAVPKLSHIRSDIASTLARIRC 191 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + Q ++ + ++ + D S Q + + + Sbjct: 192 DAAPLGGQERLEAISTLVRPG----HTPSCDWDKLS----QHPRLRTKDLIAPNLMDFA- 242 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 GR I + L + + I P L +++ + V++ Sbjct: 243 -PAGRADAVEIDGM----YASVLTLRDFGSVLEDHY-LASIIDLPIPLAVSVHIAPIVQS 296 Query: 316 HSEANLKYM-------------DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 + A +K KK + + P + +E EL L + + Sbjct: 297 EAIALVKRQIDWMDKEIIDEQTTAAKKGFSQ-SILTPEIRYAKEEAEELLDFLRNKNEHL 355 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 Y I + D+ E + + + N + S F + LP Sbjct: 356 FEYTGLIYTYA-DSLEALDRQVAQVKSIAQGNSIAVASLDFRQRPALNSVLPLGRNH--- 411 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR--NQLAFIDIFFRGMNNTNY 480 + + +A MP + G + L + + Sbjct: 412 -----LEFTRYLTTGQIAMQMPFASLELNQEGGGYYGQSKQSGNLVICN----RKLLASP 462 Query: 481 NMAVCGTSGAGKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGET 535 VCG G+GK+ ++ I + + +VFD Y +L E +GG + Sbjct: 463 MGFVCGKPGSGKSFSVKREITNTVLAHPEDQIIVFDPAGEYPTLIEALGGSNIAFSPDSP 522 Query: 536 LRFNPFA-----NITDIDQSAERVRDQL----SVMASPNGNLDEVHEGLLLQAVRASWLA 586 R +PF N+ Q A ++ L ++MA + L E + ++ + V A++ Sbjct: 523 TRLSPFDRSDVANMATTSQMAFKIDAFLALSSAMMAEGDEGLPEADKSIITRCVEAAYAK 582 Query: 587 KENR--ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + + D + LK + E ++ + ++Y + G +FN + Sbjct: 583 RGGDGTPTLSDFYEILKAQPERES-----------RDIALRYERYVS-GPLS-FFN-CQS 628 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLD 703 ++ D ++V ++L L S+ V M + + + NRMY R + IDE L Sbjct: 629 NVTFDERIVNVDLHELSS--SMRVFGMLTALEAVRNRMYANYERGVTTWLYIDEVQSL-- 684 Query: 704 FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 F + + E+ K + R+ ITQN A AR NS + ++ KQSA Sbjct: 685 FGHPAIIEYFTKFWAEGRKFNLIATGITQNST---YMLAHEDARNMVLNSDFVLLHKQSA 741 Query: 764 KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS----R 819 ++ L L G LL R D Sbjct: 742 -----LDRKSWVDLLSLSATEAGYIDDTVKAG--EGLLVAGGVRVPIR---DDFPKGALY 791 Query: 820 AMYSSDGPDFEFVQQK-RKEG 839 ++++ + +++K R+EG Sbjct: 792 DLFNTKATEIAELKRKARREG 812 >UniRef50_Q2NKG6 TrwK protein n=18 Tax=Proteobacteria RepID=Q2NKG6_ECOLX Length = 823 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 103/741 (13%), Positives = 217/741 (29%), Gaps = 116/741 (15%) Query: 161 FISYCSPSKKKSRADILEM-ENLVKIIRASLQGASITTQTVDAQAF-------------I 206 +S+ + ++++ E+ +K + + + + A+ + Sbjct: 134 VLSFFAKRERETPDQKKHRQESCIKALEDINRTLGQSFKRYGAELLSVYEKGGHAFSAPL 193 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 + + ++N + R + Y +N ++ R Sbjct: 194 EFLARLVNGEHIPMPICRDRFSDYMAVNRPMFSKWGEV----------GELRSLTGLRRF 243 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 + + LN L F+LT + V + +L Sbjct: 244 GMLEIREYDDATEPGQ--------LNVLLESDYEFVLTHSFSVLSRPAAKEYLQRHQKNL 295 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 A+ + + +E E +L SG + + +T + + + + Sbjct: 296 ID------ARDVAT--DQIEEIDEALNQLISGHFVMGEHHCTLTVYGETVQQVRDNLAHA 347 Query: 387 ILNSFRKNGFELISPRFNHMR-NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 L P + + LP ++ S N + P Sbjct: 348 SAAMLDVA--VLPKPVDLALEAGYWAQLP-----ANWQW---RPRPAPITSLNFLSFSPF 397 Query: 446 V-------ADNPLTPAGLLAPTYRNQLAFIDIF------FRGMNNTNYNMAVCGTSGAGK 492 NP PA + T + + N + G S +GK Sbjct: 398 HNFMSGKPTGNPWGPAVTILKTVSGTPLYFNFHASKEEEDATDKRLLGNTMLIGQSSSGK 457 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQ 549 T L+ L+ V FD G + MGG YL GE FNPF Sbjct: 458 TVLLGFLLAQAQKFKPTIVAFDKDRGMEISIRAMGGRYLPLKTGEPSGFNPFH------- 510 Query: 550 SAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK---------ENRARIDDVVDFL 600 A + + + + +A W + A + D +D Sbjct: 511 ------------APADARKPDFPQTVREEARGCRWRGHAPGRGRNRPGHYAMMSDSIDKS 558 Query: 601 KNASDSEQYAESPTIRSRLDE---MIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLE 656 +D + L ++ G YG F++ +L ++ + Sbjct: 559 LRRLSLLLQFLPNPRSDDMDARPTVHARLVKWCEGGDYGWLFDNPTDALDLSTHQIYGFD 618 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + D P VM L+ E+ + + + V DE W+ L ++ + + Sbjct: 619 ITEFLDNPEARTPVMMYLLYRTESMI----DGRRFMYVFDEFWKPL--QDEYFEDLAKNK 672 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 +T R+ G ++ TQ D S+ A+ + I L ++ Y Q + + Sbjct: 673 QKTIRKQNGIFVFATQEPSDALE---SNIAKTLIQQCATYIFLANPKADYEDYTQGF--K 727 Query: 777 FLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL-SRAMYSSDGPDFEFVQQK 835 + +++ G + FL++ + S+ + + + + DF+ + Sbjct: 728 LTDSEFELVRGLGEFSRR----FLIKQGDQSALAEMNLGKFRTIVDGETVERDFDD-ELL 782 Query: 836 RKEGLSIHEAVWQLAWKKSGP 856 G + + + + G Sbjct: 783 VLSGTPDNAEIAESIIAEVGD 803 >UniRef50_B5IC46 Putative uncharacterized protein n=3 Tax=Aciduliprofundum boonei T469 RepID=B5IC46_9EURY Length = 572 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 95/583 (16%), Positives = 213/583 (36%), Gaps = 64/583 (10%) Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFIL 303 +++ +++ + I P + + + S+ +N ++S+ Sbjct: 31 IEIYKNHIEAKI------KRLYIFPLLPKEYPTMLEYGYLRNLLSSYMNVDISLH----- 79 Query: 304 TLTLVVEDQVKTHSEANLKYMDLEK-KSK----TSYAKWFPSVEKEAKEWGELRQRLGSG 358 D++K L + DL K++ + + ++ E +L+ + + Sbjct: 80 ------LDRLKDEKAIALIHTDLTNIKAELLTTGETSPKYSKLKLEYDSLSKLKDLISAR 133 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 ++ L+I + E A E I ++ + F+LI + F + LP M Sbjct: 134 KTHAYFLTLSIAVKGRTYKE-AEETLGKIESALQAMNFKLIKGYYRVWAIFKSTLPMMDR 192 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNT 478 + + + + + P +++ + N + +F Sbjct: 193 NIPYYKG------RFVHTDVITASFPFISEFAGVLGEDMILYGINDINSTPVFVDRFYLP 246 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVV--FDMGDGYKSLCENMGGVYLD--GE 534 + NM + G +G+GK+ + I + ++ D + +GG+ ++ Sbjct: 247 SQNMLIFGKTGSGKSYFEKLTILRAYNVNPDVMIYAIDPLSENAGTFKALGGININLWQG 306 Query: 535 TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID 594 NP ++ A +VR ++ M ++ LL + + E+ ++ Sbjct: 307 KHVINPLELRG--EEVANKVRSVIA-MLETLFQMNGEEMALLDVILNQLYRENEH-PIME 362 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 D+++ K +L + ++L+ + G+ F + E + + D +V Sbjct: 363 DLIEMCKK-------------EEKLKRVSMVLEMF-QKGSLA--FLNRETNFKMDKDIVN 406 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFI 713 +LG + D LL M +I YI + + R KKL +DE L + + + E + Sbjct: 407 FDLGDVPDN--LLAFFMTMVIDYIYSHIKRKEYERRKKLIYVDEVHHL--WSHERAAEML 462 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 R R + +TQ+ D +K + RA N+ ++L + + Y Sbjct: 463 SWMARHTRHYKTGMTLLTQSANDAFLNKFT---RAIMENTEMHLLLYHD-YISEEVREFY 518 Query: 774 PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP 816 +F+P + I AK+ +S LL++ R++ P Sbjct: 519 --KFVPQEERYITIRHNAKEAGYSVGLLRLGVVKVPIRIYASP 559 >UniRef50_B9ZQ77 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQ77_9GAMM Length = 827 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 129/849 (15%), Positives = 248/849 (29%), Gaps = 130/849 (15%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLE--AIPINGANESIVEALDHMLRTKLPRGIPLC 97 + LLP+ + + D ++ M E G + + L + + + C Sbjct: 20 LAELLPWMALITDGCVMNKDGSVLVMFEHEGFDREGVDALEINTLVERIESAMVVLDETC 79 Query: 98 IHLMSSQLVGDRIEYGLREF----------SWSGEQAERFNAITRAY------------- 134 ++Q + G+R F +W R R Y Sbjct: 80 TLWWTTQRREIDPDPGVRSFDNPIADYVDRAWVKNLHSRRAYKHRNYLAISFANVKGSSR 139 Query: 135 ----YMKAAATQFP----LPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKII 186 Y KA A P L + + L + +F ++ I ++EN V Sbjct: 140 FFDLYAKATADGMPALKALMQAATIALQSKDRLLF------EAEEVTHWIDKIENTVDQF 193 Query: 187 RASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFD-LK 245 ASL+ + + + + + ++ ++ + K++ + P D Y D + Sbjct: 194 TASLKTLQL--RRLKGKELLAVLHRTVSPS-----SKQKLVAPDPDQAYLDSYLGEDAVT 246 Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 V YL +N +TA + ++ P + + T+ Sbjct: 247 VHPRYLKFSGHKNRYAATASVKSWPHYSTP-------------GIFDSIQKADAELDFTV 293 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSY--AKWFPSVEK----------EAKEWGELRQ 353 V+ + +K+ + AK + +++E + Sbjct: 294 AFRVQSKESARGYIEDVRRHNANFAKSLFGYAKEAFTQSDTATIDNTRLIQSEEADDALT 353 Query: 354 RLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCL 413 LG+G S +T + + + + + + F L+ + + + + Sbjct: 354 DLGAG-GSAGYLLATLTVYA-QSPKHLERDYNETMKLLHEAEFVLMRETIHLLSAWCGHI 411 Query: 414 PFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAF------ 467 P Q+KE N A+ +PL A + R + Sbjct: 412 PG--------QMKEPVRWMFVSGRNYADSIPLRAIRTGSRTNHYLTQQRGEETGALTALE 463 Query: 468 ----IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSL 522 I FF + V G S AGK+ + L + +FD + Sbjct: 464 TEHRIPYFFNFHETDLPHGFVIGPSRAGKSVFMMFLASQWNRYAPSQVFIFDKDLTCRIP 523 Query: 523 CENMGGVY--LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAV 580 G Y L E NP + + + +++ S + E L+ QA Sbjct: 524 TYLHDGKYLWLGKENTAMNPLSQLDSEEDLTWFASWVETLIESRGYQIKAEDEKLIWQAG 583 Query: 581 RASW--LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 + + L + L+ + +G Sbjct: 584 KEVMALKEAGETVTLSSFALHLPVH------------------LAEELEPWVGDGGKASM 625 Query: 639 FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 F+++E +L A +E+G L + A M I R+ L I+E Sbjct: 626 FDNEEDALSL-ADWTAMEMGQLFNDERAARAFMDYAFYRIYQRL----DGRPTLIYIEEA 680 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W +L + + + RT + I TQ++ + SSA + N +I Sbjct: 681 WFML--ADERFAAKVNDWLRTLAKKNATLIMATQSLEELAQ---SSAFVSMVDNIPNRIF 735 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 L S +LY +F + + + S P Sbjct: 736 L--SNANARASKELYTKRFGLTDAQVERIRTMTPKMQY---YICTPKASRMVEAQFPPHV 790 Query: 819 RAMYSSDGP 827 A SD Sbjct: 791 LAYLRSDAK 799 >UniRef50_B2TSH9 TriC protein n=3 Tax=Enterobacteriaceae RepID=B2TSH9_SHIB3 Length = 915 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 109/632 (17%), Positives = 207/632 (32%), Gaps = 76/632 (12%) Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 RI R+ EI ++ S + + +I+T + + SE Sbjct: 320 DTGQICRIDGNKFFRSIEIKDF--CSETASGVFDVLQYSDADYIITHSY----TSMSKSE 373 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 A EK+ K++ + +E + + + SG S Y I D+ Sbjct: 374 ALSTIKRAEKQLKSTEDDAVTQL----QELEKAKNDIVSGDISFGYYHFTIMVMA-DSIR 428 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 E I F G + + LP + + + N Sbjct: 429 ELDESVSKITADFTDLGIIPALSTMSLPAAYFAQLPAVFHL--------RPRLSPVSNVN 480 Query: 439 VANLMPLV-------ADNPLTPAGLLAPTYRNQLAFIDI-----FFRGMNNTN-YNMAVC 485 L N T A + T Q ++++ F N N V Sbjct: 481 FVELASFHNFYQGKRDKNCWTEAVAILKTPSKQAYYLNLHNSVLFKDETGEKNLANTKVI 540 Query: 486 GTSGAGKTGLIQPLIRSVLDSGG-------------FAVVFDMGDGYKSLCENMGGVYLD 532 GT+G+GKT + L S+ V D G + +GG Y Sbjct: 541 GTAGSGKTMFLSYLACSLQKYNNPETFADSAKNKKLTCVFLDKDRGAELCIRMLGGEYYT 600 Query: 533 ---GETLRFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKE 588 GE +NPFA + ++ V+ + ++ + NG L L+ ++V A Sbjct: 601 VKSGEPTGWNPFA-LEATKRNRIFVKQLMEILCTRNGERLSTRERLLISESVDAVMDFPP 659 Query: 589 NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD 648 R + L++ + E +I+ L Q+ + +G F++ + + Sbjct: 660 GEMREYGITRMLEHLMQRDDRDEQEN------GIILRLSQWANSQAHGWVFDNAKDTFNI 713 Query: 649 D--AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 ++ D P + + F L+ I + + + +DE W+ L ++ Sbjct: 714 QHVNNF-GIDGTEFLDDPMVCAPITFYLLYRITQLL----DGRRLVIFLDEFWKWL--QD 766 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 +F+ +T R+ G I TQ+ + +K S RA S I L ++ Sbjct: 767 EAFSDFVYNKLKTIRKLNGLVIPATQSPDEILKNKIS---RAVVEVCSTSIYLANPDADY 823 Query: 767 AKYNQLYPDQFLPLQRDMIGKF-GAAKDQWFSSFLLQVENHSSWHRLFVDPLS-----RA 820 Y + + P + ++I ++ L+ + S+ L LS Sbjct: 824 NDYVEGL--KLTPEEFNIIKNLDPMSRQFLIKKSSLKKGDGKSFSALATLDLSGLGGYLK 881 Query: 821 MYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 + S+ + E + EG+ + V + + Sbjct: 882 ILSASADNLEIFESIYHEGMEPDDWVPEYLER 913 >UniRef50_A9EBC2 CagE, TrbE, VirB component of type IV transporter system n=12 Tax=Rhodobacterales RepID=A9EBC2_9RHOB Length = 797 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 142/448 (31%), Gaps = 47/448 (10%) Query: 345 AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFN 404 ++ G+ +G+ + + L+I + D + T I ++ ++ Sbjct: 315 REQLGQAADDQEAGRIAFGDHHLSIAVYAPDRD-TLERAAAQIKRVGQEIMSVIVRENMA 373 Query: 405 HMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD--------NPLTPAGL 456 + P G K S N A+ L +P Sbjct: 374 LKATYFAQSPGNFGYRARK--------TPISSINFADFAALHGSVEGRGPDQSPWGQTIS 425 Query: 457 LAPTYRNQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVF 513 + PT + G T + V G +G GKT L G F Sbjct: 426 VLPTVGTSGYRFNFHEAGAPGKEPTVGHTLVLGRTGTGKTLTTAFLAAQAQRVGARLFFF 485 Query: 514 DMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDE 570 D G + +GG Y + G NP A TD ++ + D L+ + + NG L Sbjct: 486 DKDRGLEMAVRALGGRYNEIRAGVPTGLNPLATETD-ERGRAWLSDWLATLLTRNGTLSG 544 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT 630 + AV + A R ++ D E+ + ++ Sbjct: 545 EQSRHIQSAVGQNADAGAALQRFASFETLFQSLDDD-------------GELQSRVAEWA 591 Query: 631 ANGTYGQYFNSDE--PSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 G YG F+ E L+ +V ++ + D + +AV+ + IE + Sbjct: 592 PGGRYGWVFDEPERGAGLKLTGDIVGFDMTEILDMTTERMAVLSYIFRQIERVV---EDR 648 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 + V+DE W+LLD + G +E T R+ I +TQ S + Sbjct: 649 RPTIIVLDEAWKLLD--DPYFGARLENWLVTLRKMNCVVIMMTQYPSQLRD---SRVGKT 703 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 +I+ + Y+ L + Sbjct: 704 IVETVPTQILFPNDRATVSDYDFLRVNA 731 >UniRef50_A8PLL0 ATPase n=1 Tax=Rickettsiella grylli RepID=A8PLL0_9COXI Length = 823 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 115/708 (16%), Positives = 239/708 (33%), Gaps = 97/708 (13%) Query: 161 FISYCSPSKKKS--RADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPD 218 + + K++S + + + ++ L+ + + + I + I + Sbjct: 148 YFAIEGDIKRESGFETQLKQFDKKLQEFTGFLKRSLVNLSPLINNELITYLHNCITGDSH 207 Query: 219 SLYPKRRQ--LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPE 276 L R LD Y +Q F+ ++ Y+ + + P Sbjct: 208 QLVMPRTGAFLDAYVAEAFQ---GGFEPRIAGKYIKV---------------LAIDDLPS 249 Query: 277 IAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAK 336 ++ +L + T + D++ + + K+ Sbjct: 250 YSYP--------CILEALSYFPIEYRWTSRFICLDRLTAKAYLKRYERNWSSKAIGVMGV 301 Query: 337 WFPSV---EKEAKEWGELRQRLGS-------GQSSVVSYFLNITAFCKDNNETALEVEQD 386 S+ + + +L + GQ S Y N+ D + ++ QD Sbjct: 302 IRESLGLEARRDDDAQATVNQLKTAQIENSAGQISYGFYNSNLILIHND-KKFLEKISQD 360 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA----ESFNVANL 442 I+ ++ F + N +L +P L K L++ + A + + Sbjct: 361 IIAKIQQLDFRVRDESLNAAEAYLGSIPCHGDYNLRKMLQDTQFIAHAFPVSSLYQGESK 420 Query: 443 MPLVADNPLTPAGLLAPTYRNQ-LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 P D A LL + +++ + +T A+ G +G+GKT L L+ Sbjct: 421 SPCKKDGYNDQAPLLLTATKGSRPFMLNLHIGDVGHT----AIVGPTGSGKTTLNAMLMA 476 Query: 502 SVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGETLRFN--------PFANITDIDQSAE 552 S G +V D ++ ++GG Y D E+ +F P N I+Q+ E Sbjct: 477 SHRKYPGSRIIVLDKDQSNRTAILSLGGQYFDLESDQFQLGVLARIHP-DNPEQIEQAIE 535 Query: 553 RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES 612 + D V + + LL +AV L ++ +D + + Sbjct: 536 WLSDCCRV---QGVTVTPARQKLLREAVERLSLDAQSYKNLDHLS------------LQD 580 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 P +R + +G Y + N EP+ ++ E+G L V Sbjct: 581 PVLREAISSF--------NSGQYRRLLNGTEPAFSGG-DILGFEMGSLVKADMHARDVAI 631 Query: 673 SLIIYIENRMY-RTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 +I I N + L +++E W L ++ + ++T R+ + I I+ Sbjct: 632 PVIKAIFNELEQLFKDKRPTLLILEEAWLYL--RHPLFRNKLTDWFKTLRKSNVSVIFIS 689 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQ-SAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 Q++ D +A+S + ++ L A+E NQ Q +I + Sbjct: 690 QDLDDIVKSEAASL---IQTSCMTRLYLPNKKAEESHIANQYRAFGLNEQQITIIKEATP 746 Query: 791 AKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRK 837 +D ++ Q E + RL + L++A + S+ + + + + Sbjct: 747 KQDYYY-----QSECGNRLFRLDLGDLAQAFLCISEKSESDHFNKLYQ 789 >UniRef50_Q0ACT3 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0ACT3_NITEC Length = 806 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 97/570 (17%), Positives = 181/570 (31%), Gaps = 70/570 (12%) Query: 289 NLLNPELSISCPFILTLTLV---VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA 345 +LN L++ C +I T + D + + + E + + + Sbjct: 266 GVLNTLLALDCEYIETHSFSPMTTLDAQSALKKQRNQMISSEDNALS-----------QI 314 Query: 346 KEWGELRQRLGSGQSSVVSYFLNITA--FCKDNNETALEVEQDILNSFRKNGFELISPRF 403 E E + SG + Y ++ D +LN+ G +L Sbjct: 315 VEIDEAIDSVISGNFVLGEYHYSLLVKGETPDQTREFRSNASQLLNNANFLGVDLEKVTA 374 Query: 404 NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD----NPLTPAGLLAP 459 + LP +K + V + + NP A L Sbjct: 375 ---SAYAAQLPCN-----WKSRPREARISSRNFTGVCSFHTFDSGKRNGNPWGEAVTLFR 426 Query: 460 TYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVF 513 T + + + + N + G SG GKT L L+ ++L G V F Sbjct: 427 TPAGAPFYFNFHDTPLGVDSTGNKALGNCQIIGQSGGGKTVLALFLMLNLLKYGTQCVFF 486 Query: 514 DMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDE 570 D G + +GG YL +G+ F PF T V + Sbjct: 487 DKDRGAEIAIRRVGGKYLALENGKPTGFAPFKMETTEKNILFWVALIKYCTRRSDVAHTP 546 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT 630 E L+ AVR+ + ID V+ FL + + L +++ Sbjct: 547 EEENLIASAVRSVAGMPVQQRCIDAVLQFLPVGDP--------------NGLAQRLKKWS 592 Query: 631 -ANGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 + G G + L+ + + + D + +M L+ +E ++ Sbjct: 593 ISRGNLGWALDCQRDELQFEEGRPYGFDYTDFLDNEEICGPIMMYLMYRVEEQI----DG 648 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 +DE W+ L +F + +T R+ G + +TQ+ D S ARA Sbjct: 649 RLFAFFMDEYWKALSVD--YFKDFAKNKQKTIRKQNGLGVYMTQSPHD---TLQSDIARA 703 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS 808 ++ I L A + Y + + + ++ + + FL++ + S Sbjct: 704 LIEQTATFIFLPNPAADHDDYVNGF--KLTETEFKLVRELQDSSR----MFLIKQGHRVS 757 Query: 809 WHRLFVDPLSR--AMYSSDGPDFEFVQQKR 836 RL + + S + E + + R Sbjct: 758 LARLDLGDFKNEIKILSGSTDEVERLDRLR 787 >UniRef50_Q3EN28 TRSE PROTEIN n=9 Tax=Bacillales RepID=Q3EN28_BACTI Length = 645 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 90/572 (15%), Positives = 185/572 (32%), Gaps = 73/572 (12%) Query: 300 PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS---VEKEAKEWGELRQRLG 356 P ++T V+ D E+ K M E+ + AK + E E L L Sbjct: 75 PNVITTLDVMSDNRNEVVESINKSM-SEQSVRHDTAKDNIDRIDAKNEFLELEALYTDLK 133 Query: 357 SGQS-SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPF 415 G+ + + ++A D E ++ + L S+ G ++ + +T Sbjct: 134 QGEVMKRIHIRIYVSARTIDELEKQVKEILETLESYNFRGAVFLNEQEYEWDALVTSF-- 191 Query: 416 MAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRG 474 K + + ++A P P G T + DIF + Sbjct: 192 ----DTQKNYVNRRKGKEIPAVSLAGGCPFHYSYLHDPYGTYYGTTKTKGNVIFDIFHKD 247 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--D 532 +YN + G SGAGK+ L++ G F +FD+ + + + +GG + D Sbjct: 248 NQRKSYNGVMIGKSGAGKSTLLKKKSVDYASKGHFVRIFDVVEEFTDTVKELGGKTISLD 307 Query: 533 GETLRFNPFANITDIDQSAERVRDQLSVM------ASPNGNLDEVHEGLLLQAVRASWL- 585 G + NP + LS + +P DE+ E +R ++ Sbjct: 308 GSQGQINPLQVYKTAELEEVSFTQHLSKLTIFYRFIAPEAKDDEIKE--YENLLRKLYIR 365 Query: 586 ------AKENRARIDD---------------VVDFLKNASDSEQYAESPTIRSRLDEMIV 624 K + I V L ++ ++ ++ ++ Sbjct: 366 MGLWNDEKGAKNEITTRKSKEYPIFSDFLMFVRKELYQDVEARKHHDNLGDSRIHRLELI 425 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLIIYIENRM 682 L+ Y + F+ ++V L + +P + A +F+++ + + M Sbjct: 426 ELNLTNLVEAYAELFDGHTTIEDFKKEQVVSFSLRNISSFKPEVFQAQIFNVLNLLWDEM 485 Query: 683 YRT---------------PRNLKKLNVIDEGWRLLDFKNHK--VGEFIEKGYRTARRHTG 725 ++ +IDE +++ K +F+ K R R++ Sbjct: 486 ISNGAPQLKAFNKKQLAFEDVVRYFIIIDEAHHIINTKKESAHALQFLTKLSREDRKYFA 545 Query: 726 AYITITQNIVDFDSDKASSAA----RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + + I DF + +S + + + YK I++Q +++ Q + Sbjct: 546 GLLYASHTIRDFVPEGSSQEMIDEIKKLFELTQYKFIMQQDNNSLDMLRKVFAGQLSESE 605 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 I +L + + H Sbjct: 606 IAAIPHLPTG------DVILSIGAVKNIHFHV 631 >UniRef50_B9Y5S2 Putative uncharacterized protein n=11 Tax=Firmicutes RepID=B9Y5S2_9FIRM Length = 861 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 98/690 (14%), Positives = 211/690 (30%), Gaps = 81/690 (11%) Query: 71 INGANE--SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFN 128 + G ++ I E L I + + L SS G G+ Sbjct: 206 LAGPDDQRDIFERLCD-FYNGYDPSIGVQMTLSSSHKAG------------GGDLFRMAA 252 Query: 129 AITRAYYMKAAATQFPLPE-GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIR 187 ++A A+ + ++ V ++ + S + +RA +E Sbjct: 253 QGDELDGIRAEASGILQTQYERGSNGYVKSKYVTLTIEAESIQAARARFSRIE---ADTL 309 Query: 188 ASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVR 247 + + +D + + ++ +++ + P + D +K Sbjct: 310 NRFKVMGAAAKVLDGKERLALLHGLLHPRGE---PFAFEWD-------WLAPSGLSVK-- 357 Query: 248 ADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSN-LLNPELSISCPFILTLT 306 D++ E G R+ ++FL +A + +L + + ++T+ Sbjct: 358 -DFIAPSSFEFGETRRFRMGEM----YGAVSFLQILAPEIQDRILTDFMGMEGNLLVTMH 412 Query: 307 LVVEDQVKTHSEANLKYMDL--------EKKSKTSYAKWF--PSVEKEAKEWGELRQRLG 356 + +Q + K DL +K +++ Y + L Q L Sbjct: 413 VRGINQNEAIKMVKRKITDLDAMKIQEQKKAARSGYDLDILPSDLSTYGGAAKNLLQDLQ 472 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 S + + + + + V Q + + + L F ++ LP Sbjct: 473 SRNERMFNMTFLMLHLAPTKQKLEIAVSQSA-SVAQTHNCILTRLDFQQEDGLMSSLPLG 531 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMN 476 L + + + +A +P V + + + R + Sbjct: 532 --------LNRIQIERSLTTSALAVFIPFVTQELFMGGDAMYYGLNALSGNMILLDRKQS 583 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET 535 N V GT G+GK+ + I +L + ++ D D Y L +GG + Sbjct: 584 RC-PNGLVFGTPGSGKSMSCKREITYVMLTTKDNVIICDPEDEYSPLVNRLGGQVIRLSP 642 Query: 536 LR---FNPFANITDIDQSA-------ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL 585 NP + + + V ++ L+ + + ++ +AV+ + Sbjct: 643 NSRDYVNPLDINLNYSEEENPLALKSDFVLSFCELIMGSKTGLEAIEKTVIDRAVQKIYQ 702 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 R + + SD + I D + LD Y +FN + Sbjct: 703 PYFADPRP----ENMPILSDLMAALTAQHI-PEADRVAQALDLYVNGSL--NFFN-HRTT 754 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIEN-RMYRTPRNLKKLNVIDEGWRLLDF 704 + ++V ++ GL L M + + N +DE LL Sbjct: 755 VDIRNRLVCFDIKGLGKN--LKKPGMLIVQDAVWNTVTVNRSIGRATWYFVDEFHLLL-- 810 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNI 734 K + + + ++ R+ G TQN Sbjct: 811 KEEQTAAYSAEIWKRFRKWGGVPTGATQNP 840 >UniRef50_C8SC72 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SC72_FERPL Length = 604 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 97/529 (18%), Positives = 192/529 (36%), Gaps = 58/529 (10%) Query: 300 PFILTLTLVVE--DQVKTHSEANLKYMDLE---KKSKTSYAKWFPSVEKEAKEWGELRQR 354 P++L VE D+ + +E N + LE ++ + S+E E + R+R Sbjct: 89 PYLLDFVQFVEPMDETRIVNELNRRITQLEAKLQEMREKGRTDTTSLEHELEYLYSYRER 148 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLP 414 L S Q+ + + D+ A + D + G +L R+ + F T LP Sbjct: 149 LVSRQTKLYTLSTYFYILA-DDKNAAEDYFADFNKRMKAKGCQLKRIRYRMLEAFKTLLP 207 Query: 415 FMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQLAFIDIFF 472 K L +S A+ P V + +G+L +D F Sbjct: 208 EGKDYLSRKVL--------VDSEAAASCFPFVFPTLMHESGVLYGYDVATKSPIIVDRFK 259 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVF--DMGDGYKSLCENMGGVY 530 +N V G G+GK+ + + + + +F D G+K L +G Sbjct: 260 FAG----HNEIVVGKIGSGKSFFAKLEVARWVLNDPEVRIFLVDPLAGFKDLAAVLGAQR 315 Query: 531 LDGETLRFNPFAN-ITDIDQSAERVRDQLSVMASPNG---------NLDEVHEGLLLQAV 580 + NP + + + ++D+L + LD+ G+L +A+ Sbjct: 316 VVVGKNVMNPLDIFVPEGETPQSVLKDKLMSLLEFFSTFFEEEVGSPLDKAESGVLRKAI 375 Query: 581 RASWLAKE-NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 +++ K+ IDDV++ +Q R + + + +TA F Sbjct: 376 IKAYVDKKFRDVIIDDVIE------KIDQVPVGEEERRAAERIKSAMSAFTAE---LSMF 426 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 N + ++V + +E + + +++ +I +R KK+ V+DE Sbjct: 427 NG-RTDVNIRNRVVYFDFSAVEGVEKSPLP-LHAVLTWIGSR--ERAEKGKKMVVVDEAH 482 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 + ++ ++ +F+E+ R +R H Y +TQ +F + R N+ +I Sbjct: 483 YFMAYR--QIRKFLEREVRHSRHHKTGYTLVTQGYDEFIRFE---EGRTIISNADIHVIF 537 Query: 760 KQSA--KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENH 806 + A +E + + + + K +SS LL Sbjct: 538 RLEAIPEEVKRILDI-----PASGEGFVKEAAQGKTAGYSSALLITPAG 581 >UniRef50_C7CWC1 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7CWC1_ENTFA Length = 643 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 81/532 (15%), Positives = 185/532 (34%), Gaps = 72/532 (13%) Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI 399 + E + L +G + + I + E + +L + +G++ Sbjct: 104 DLANEIEILRTLSFEMGQQGEQIKKVAIRIFL-SQPTLEALEKQVNIVLGTLNSDGYDGT 162 Query: 400 SPRFNHMRNFLTC-LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLA 458 + + LP + L + + + A ++ ++D G Sbjct: 163 VLLGEQKEEWQSMFLPLSEQRKLRNRREGMDIQAEALGLGFSHNQTFLSDETGFYYG--- 219 Query: 459 PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDG 518 T + + D+FF+ YN+ + G G+GK+ +++ ++R G + FD Sbjct: 220 FTQTGGVVYWDLFFKSKKRLYYNLFLAGDMGSGKSTILKKILRDNAAKGHYIRGFDKSGE 279 Query: 519 YKSLCENMGGVYL--DGETLRFNPFANIT--------DIDQSAERVRDQLSVMASPNG-- 566 + ++ + GG+ + DG+ N F D D+ +R S G Sbjct: 280 FFNIVKEYGGISIPLDGQRGVINMFQVYPLVSKDSENDSDEVEVDIRGSFVQHISMLGIL 339 Query: 567 ----------NLDEVHEGLL------------LQAVRASWLAKENRARIDDVVDFLKNAS 604 L ++E ++ ++ + L E D +++L+ Sbjct: 340 FKIRNKAATDELVSIYEDIVWDFFTDFGIWKEDASIDITSLPNEAYPTCTDFMNYLEKVE 399 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDR 663 ++ L ++ + + T Y F+ D ++V ++ G+ Sbjct: 400 ETIDEERKGY----LQKIKITMKPLTK--QYKHIFDGKTSVPDLGDNQIVFFDIAGISQL 453 Query: 664 -PSLLVAVMFSLIIYIENRMYRTPRNLKK---------------LNVIDEGWRLLDFKNH 707 + + +F + +I + R + K L V+DE +L+ + Sbjct: 454 GSEIFDSQLFIALNHIMGNITRIGKREKGYFDRNEKDWWDIIRCLVVVDECHNILNIEKA 513 Query: 708 KVGEFIEKGYRTARRHTGAYITITQ----------NIVDFDSDKASSAARAAWGNSSYKI 757 ++ AR++ TQ N D D+ +A++ + +G + YKI Sbjct: 514 YAAKWFVTLMSEARKYFTGIALATQRVQRMFPNADNAQDKDTVEAANKLKEIFGLTQYKI 573 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW 809 +LKQ + +++ + F + ++I F +K+ S +L + + Sbjct: 574 LLKQDSTSIGFLKKIFGNTFTETEYNLIPAFETSKEVGGSQGILSISGDQNI 625 >UniRef50_Q971Q3 Putative uncharacterized protein ST1312 n=1 Tax=Sulfolobus tokodaii RepID=Q971Q3_SULTO Length = 619 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 104/593 (17%), Positives = 218/593 (36%), Gaps = 78/593 (13%) Query: 234 NYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNP 293 N +E +K DY+ L ENG + + + R P+I +A+ + L Sbjct: 87 NQTKLERPRIVKTHPDYVEL---ENGLLAQSAV----FYRFPDIVPEGFLAEYFG--LGD 137 Query: 294 ELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQ 353 + D V S + LE S ++ ++ +L Q Sbjct: 138 ---------VVFKWEALDPVSAASAIDRTRKRLESSSSNDSFTI-----RKLQKVTQL-Q 182 Query: 354 RLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCL 413 + GQ+ ++ +++ IT + + E I + F++ P+F + Sbjct: 183 GIIGGQAKLLRFWVYITYYGETKGE-LKNKFNQIRAIAKSRLFDIDIPKFYQGALYN--- 238 Query: 414 PFMAGKGLFKQLKEAGVVQRAESFNVA-NLMPLVADNPLTPAGL-LAPTYRNQLAFIDIF 471 F F + ++ + PL++++ + G+ L + + + Sbjct: 239 -FRTDVDFFVPFYNSVRPHYVDTITASWQFYPLISEDLIDEGGIFLGFSDSGSPVVFNPY 297 Query: 472 FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMG--G 528 R NYNM + G +G+GK+ + ++ + D + Y + +G G Sbjct: 298 RRA----NYNMIILGETGSGKSMTAKIFLKRMKKQFNIKIWGIDPENEYVKVSTALGVKG 353 Query: 529 VYLDGE-TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 V + TL +PF ++ I+ R+ D + +A + ++ L +RA Sbjct: 354 VVVKKNMTLGLDPFK-LSRIETEEGRLID-VEDIAELLADFYLPNDIALRNRLRALVDDY 411 Query: 588 ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 ++ + + V+ ++ E P + LD + D Y F+ D S+ Sbjct: 412 KDSESVFEFVERVRK--------EDPEVGKYLDAINSPPDSY--------IFDGD-VSIS 454 Query: 648 DDAKMVVLELGGLEDR-PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 D+ +V L + S L A++ +L+ I ++ + + K IDE W +++ Sbjct: 455 DN---IVFGLKEISGTGASRLKALITTLLTIIYQKLMFSNKE-KGYLFIDEAWLFVNY-- 508 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 +E R AR++ + +TQ D ++A R S+ ++L+Q Sbjct: 509 PVTMSLLENISRRARKYNKGLLFVTQKPADVAGNEA---GRTILEQSATVLLLRQKKAGI 565 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSR 819 ++Y + + + + +L+ N+ RL++ P S Sbjct: 566 EVLQKVYGIR--QQEAEALLNVDPGHG------ILRTGNY--LLRLYIQPSSE 608 >UniRef50_B9KGH4 Secretion/conjugal transfer ATPase VirB3/4 n=11 Tax=Campylobacterales RepID=B9KGH4_CAMLR Length = 924 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 133/866 (15%), Positives = 277/866 (31%), Gaps = 120/866 (13%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALDHMLRTKL 90 P +L+PY +S + + + G E ++E++ + + L Sbjct: 117 PSLEKLIPYSSLLTDSIVITKEHMLISTFFIEGIEFECE----SDENL------IFKKNL 166 Query: 91 PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMN 150 + + + + L EF S + I Y+ K+ + + Sbjct: 167 LNMMIMSFSNEPIAFYFHNVRFKLHEFLDSHFENSFLKEIDEKYH-KSFDKKSFQQNSLY 225 Query: 151 LPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 L L + + I + +K ++ E+ N V + L + + Sbjct: 226 LTLVYKPLKSNIDLKTFNKLNYKSKAKEISNFVLKFQEYLGKLEANIKDFKPKILSVYKK 285 Query: 211 EMINHNPDSL---YPKRRQLDP----YSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST 263 I ++ Y + +P + + +++ D + L ++ + Sbjct: 286 NNIKYSEQLEFYNYLIGGKFNPVVVCDTPIYQYLTGTLKNIQFNHDMIQLNYNDDTKRFA 345 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 I + +S +L+ + + + +T T V + + S N + Sbjct: 346 RII---EIKDYSNE--------TFSGILDSLMYLDVDYTITQTFVPLSKYDSKSALNKQI 394 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV 383 L + ++ L S S +Y NI F D+ + + Sbjct: 395 NQLISSEDDGV--------SQIEQLNLALDNLISNVISFGNYHFNICVF-GDSIDECKKN 445 Query: 384 EQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLM 443 ++ S GF ++ + P V S N ++L+ Sbjct: 446 TNKVITSLNSLGFTSTLANIALPASYFSQFPSNFAI--------RPRVHMISSLNFSSLV 497 Query: 444 PLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN-------YNMAVCGTSG 489 L N A + T Q F++ N + N + G SG Sbjct: 498 ALHNFLMGKKEKNCWGDAVTILKTPNKQPYFLNFHKSDGKNKDEFGDLNLANTLILGQSG 557 Query: 490 AGKTGLIQPLIRSVLDSGGF---------------AVVFDMGDGYKSLCENMGGVYL--- 531 GKT + +I ++ AV D G GG Y+ Sbjct: 558 GGKTVFMNFIINQMIKYANKDSFPANIPEDKKKFTAVFLDKDKGALGNILCAGGRYISIK 617 Query: 532 DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENR 590 +G+ FNPF T+ +++ ++ + + + NG L+ E + +AV E Sbjct: 618 NGKPTGFNPFMVETN-EENLRFLKQLIKLCVTRNGEILNTKEEKQINEAVNTLMFQFEIS 676 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 R + L+N +D + + + L + +G F+++ +L Sbjct: 677 ERKYPISLLLENITDD---------FNDNNSLKSRLSLFQKGKQFGWVFDNEYDNLDFPD 727 Query: 651 KMVVLELGG--LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 + + + G D + + + ++ + N + IDE W+ L+ N Sbjct: 728 DINLFGIDGTEFLDEKDVSALISYFILWRVMN----LADGRRLCIDIDEAWKWLE--NDI 781 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 V E ++ ++T R+ G TQ+I DF K A S+ KI L AK Sbjct: 782 VAEEVKNKFKTIRKQNGFLRLATQSIEDFLKLK---IANTLVEQSATKIFL---PNPLAK 835 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWF----SSFLLQVENHSSWHRLFVDPLSRAMYSS 824 ++ + ++ F K Q+ ++ + SS + + S+ Sbjct: 836 EDEYLRLGLSKDEFLIVKNFAPHKRQFLVKRQDEAVVCSLDLSSLG-----KENLKILST 890 Query: 825 DGPDFEFVQQKRKE-GLSIHEAVWQL 849 E ++ + ++ E + +L Sbjct: 891 GTSYIEKIENIFNQENKTLEEKINEL 916 >UniRef50_B1BPA3 Putative uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BPA3_CLOPE Length = 632 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 84/545 (15%), Positives = 193/545 (35%), Gaps = 60/545 (11%) Query: 300 PFILTLTLVVEDQVKTHSEANLKYMD-LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 I+TL + ED++K + + + + + T+ ++ +KE + L++ + Sbjct: 63 NAIVTLDIATEDKMKARQKIRVAIQEQVSRFKSTNDSEEQTLAKKEYQNMKALQELVLDN 122 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + + I F ++ ++ E +++++ + + ++ + + Sbjct: 123 GEVMKLFKIRIYLFDRERSK-LEERVKEVVSELESHNYGCAINLNELELDYKSIF---SS 178 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNN 477 ++ A S ++ MP + P GL T D+F + Sbjct: 179 YKSQQKYSNKRKWNGAPSLSLGASMPFHYTSLDDPYGLFLGSTATGGSVIWDLFHNDEDR 238 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG--VYLDGET 535 +YN G G+GK+ ++ + + + D+ ++ + + +GG VYLDG Sbjct: 239 LSYNFLFVGKQGSGKSSALKKIFLNNDILDNTIRILDLTGEFEEVVKELGGKEVYLDGSG 298 Query: 536 LRFNPFANI-TDIDQSAERVRD-------------QLSVMASPNGNLDEVHEGLLLQAVR 581 NP T I++ V + ++ + + ++ GLLL Sbjct: 299 GIINPLQIYPTIINEKTNEVLEEQCYTCHISKLNMIYGFLSPNSTDDEKKEFGLLLNRFY 358 Query: 582 ASWLAKENRAR---------IDDVVDFLKN--ASDSEQYAESPTIRS----RLDEMIVLL 626 + + N+A D + F+++ D E+ TI RLD + + + Sbjct: 359 KKFGIERNKATRYKAKDYPIFSDFLKFIESELYIDVEKKIVDNTILPSRITRLDSIKLTI 418 Query: 627 DQYTANGTYGQYFNS-DEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIYIENRMYR 684 + N +G FN ++ + + ++ +FS++ I + Sbjct: 419 EDLVEN--FGDLFNGYSNIEDVTKENLISYNFKNISQYDERIFISQLFSVLTSIWGQALV 476 Query: 685 TPRN---------------LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 R K L +IDE ++ + + +I + R R++ Sbjct: 477 QGRREKEKYDSGEVGIEDVKKFLILIDEAHVCINPRKIEAVRYINRMLREDRKYFTGVGF 536 Query: 730 ITQNIVDFDSDKAS----SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 +I D+ + S S + + YK ++KQ + +++ Q D + Sbjct: 537 ANHSINDYVPENVSDAELSEIKKIFSLCQYKFLMKQGIENKENIKKIFASTISDKQIDNV 596 Query: 786 GKFGA 790 F Sbjct: 597 VDFQK 601 >UniRef50_B5TTQ0 TraE n=3 Tax=environmental samples RepID=B5TTQ0_9BACT Length = 820 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 110/790 (13%), Positives = 233/790 (29%), Gaps = 85/790 (10%) Query: 108 DRIEYGLREFSWSGEQAERFNAITRAYYMK---AAATQFPLPEGMNLPLTLRHYRVFISY 164 +I G+ E + + YY + Q + + R+ + Sbjct: 82 HKIRRGVNERLNGVYENDFIADFNERYYQQFQGEKNKQMATELYLTILYRPEISRLTKIF 141 Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE--MINHNPDSLYP 222 S + + A +++ + I+ + + + + + + + + L Sbjct: 142 KSKASRDPVALKKQIKRDLDILDDVAKQVEASLYHYNPERLATYTKKGFVYSEMCNLLGF 201 Query: 223 KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 + L + D + + L G +N +I + + + Sbjct: 202 LTNGVWEEIPLRQ----ANLDQYIPSSRLFFG----DKNGYLQIKHPEAQKYVGFLDIQE 253 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 + + C IL + +D K K + Sbjct: 254 FPRLSESGM-------CNSILYGNYEYIETQSFTVYGKRDAVDKLKTIKGQLNSVEDVSD 306 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPR 402 +E ++ SG + Y + F N+ AL V + GF++ Sbjct: 307 QEIRDIDLAMSEANSGNFQLGEYHYTLAIFGDSPNQVALNVSSARTALSDEAGFKMAVID 366 Query: 403 FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-------ADNPLTPAG 455 + + L S N + L P NP A Sbjct: 367 TVPECAWFSQLAGNFN--------MRPREAYLTSLNFSALSPFHNFARGKRDGNPWGEAL 418 Query: 456 LLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRSVLDSGG- 508 L T Q + + + N V GT+G GKT L+ ++ Sbjct: 419 ALFKTPSGQPFYFNHHVSPDKQDSTDDKMPGNTCVIGTTGVGKTTLVMAMMMFACKYKNL 478 Query: 509 FAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPN 565 V FD G + +GG Y G FNP + + + + V + ++ Sbjct: 479 KGVFFDKDRGAEIGIRRIGGQYYALERGVPTGFNPLQ-LPPTETNIQFVEKLVKILVGGV 537 Query: 566 GNLDEVHEGLLLQAVRASWLA--KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 N E E + QAVR R+ + LK + D + Sbjct: 538 RNAAEDLE--ISQAVRTIMRDDMPLELRRLSALYMNLKVNGGGDSLQ---------DRLA 586 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDA---KMVVLELGGLEDRPSLLVAVMFSLIIYIEN 680 + +G F++ + + + D P + +M L+ ++ Sbjct: 587 KWCNTADHDGNLSWVFDNPYDTQDFSKAKMPIFGYDYTEFLDDPEVRTPIMAYLLHITDS 646 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 + + +DE W+ L + +F + +T R+ G + +TQ+ D Sbjct: 647 LI----DGSPFIYWMDEFWKPL--TDEYFKDFAKDKQKTIRKLNGLGVFMTQSPSDVLD- 699 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 S + S +I L ++ Y + + P + ++I + FL Sbjct: 700 --SDIGKTMVEQSVTQIFLPNPRADYDDYVNGF--KVTPQEFEIIKELEENSR----MFL 751 Query: 801 LQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGPE 857 ++ + S+ ++ + + + S + E ++ E G ++ + Sbjct: 752 VKQGSRSALCKMDLGEMRDVLQIISGSKDNVELLENLMNEVGEDPNDWGELFLQR----- 806 Query: 858 MASLEAWLEE 867 +A + + E Sbjct: 807 IAERKKLISE 816 >UniRef50_A9L6R4 CagE TrbE VirB component of type IV transporter system n=1 Tax=Shewanella baltica OS195 RepID=A9L6R4_SHEB9 Length = 808 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 92/599 (15%), Positives = 183/599 (30%), Gaps = 72/599 (12%) Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 I + P+ + N+LN + + + D + Sbjct: 241 DQYIATIGIDNFPDESSP--------NILNHLDKLGFAYRWSSRFAFFDLFDAEKALEKE 292 Query: 323 YMDLEKKSKTSYAKWFPSVEKEAKE------WGELRQ-RLGSGQSSVVSYFLNITAFCKD 375 + + + + + E W + L G ++ + Sbjct: 293 RKTWKSRVISFKDVLAKTPNPKINEDAAKMVWQYEQALNLARGGKLKYGHYTPAIIVMNE 352 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAE 435 + E E + I+ + + GF N + FL LP + + + L Sbjct: 353 SREYLAECCEKIVKTIDQLGFGCRVETVNSVETFLGSLPSDSLHNVRRPLVN-------- 404 Query: 436 SFNVANLMPLVADN--------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 + N+ +++PL + P P A + + + V G Sbjct: 405 TVNLGHMLPLSSIWSGRLTNPCPFYPPNSPAVMQCSAEGAAPFRLNLHIDDLGHFLVFGP 464 Query: 488 SGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN 543 +GAGK+ L+ L+ + VFD G + + GG + D E + F P ++ Sbjct: 465 TGAGKSTLLATLVAQTNRYANRKQFVFDKGRAAYPISQ-CGGTHYDICVDENVTFAPLSH 523 Query: 544 I-TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN 602 + TD + L + N + + +R + I D + Sbjct: 524 LRTDFAWCCNYIEKLLEL---QNVFISAKQRNGIENGLRELTASNIKDINISDFLHI--- 577 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED 662 + ++ L+ YT++ G NS + S + + V E+G L Sbjct: 578 --------------ANDTQITDALNFYTSDSA-GNLLNSRKDSFKSST-LNVFEIGELMK 621 Query: 663 RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 R + M +++YI ++ R+ +DE W + F + + + +T R Sbjct: 622 RGTKE---MIPVLLYIFRQIERSLDGSPGFIFLDEAW--VAFGDPVFKPMLVEWLKTMRT 676 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 TQ++ D S KI L A + Y L ++ Sbjct: 677 ANCVVGLFTQSLTDAIK---SGILDVLIEACPTKIFLANPAADADVIKPTYKSFGLNDRQ 733 Query: 783 DMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDGPDFEFVQQKRKEGL 840 I K K ++ + + L + L+ A SS ++ + Sbjct: 734 IDIIKRAVRKKHYY----ITSPEGNRLFDLALGELTLAFVGSSSKQHIARIKTLVGQHQ 788 >UniRef50_Q8E597 Putative uncharacterized protein gbs1135 n=2 Tax=Streptococcus RepID=Q8E597_STRA3 Length = 796 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 102/724 (14%), Positives = 244/724 (33%), Gaps = 87/724 (12%) Query: 72 NGANESIVEALDHMLR--TKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNA 129 G+ + ++ +++ + L + +++ + ++ + G++ + F Sbjct: 70 TGSEDEKLDIIEYYVDALNGLDSENTYQLTILNRPVPTTLLDQITYDL--EGDERDVF-- 125 Query: 130 ITRAYYMKAAATQFPLPEGMNLPLTLRHYRV--FISYCSPSKKKSRADILEMENLVKIIR 187 R Y ++F + +++V F++ + +K + +A ++ ++ Sbjct: 126 --RKEYNNIIRSRFAKDQN--------NFKVEKFVTVSTRAKDRKQA-YRKLNDVDTHFT 174 Query: 188 ASLQGASITTQTVDAQAFIDIVGEMI--NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLK 245 Q + +++D ++I +++ N D Y R S L+ + L Sbjct: 175 TQFQLVDVLLKSLDGTERLNIFADLLRGNPYLDVDYKDVR----ISGLSTKSFIAPGRLW 230 Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC-----P 300 + D + +IL P + +L + + ++ P Sbjct: 231 FQPDQFMM------DKKYCKIL------FPRTFPAFLNDRLIKSLTDIGIELAISIHAQP 278 Query: 301 FILTLTLVVEDQVKTHSEANLK--YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 + + + + + + ++ + +K +S + A E + + + Sbjct: 279 YDVAEAVKKVNTAEAGVKMDMVKSQVSAAQKGISSNLAVSSVAQDTADEAEKWKTEINDN 338 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + S + D+ E + I + RK+ E ++ + LP Sbjct: 339 DQKMFSGVFLVMVKA-DSAEELADYTSRIKQAGRKHVIEFEETYYHQEEALNSMLPIGKT 397 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAF-IDIFFRGMNN 477 + +K ++ + N+A +P + + + L +NQ++ I R + Sbjct: 398 ---YIDVKR-RFMRDMTTTNIATQIPFTNTDLQSQSPLANYYGQNQISNNIISLDRQRDL 453 Query: 478 TNYNMAVCGTSGAGKTGLIQP---LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD-- 532 + + G+SG+GK+ ++ + + ++ D + Y + G +D Sbjct: 454 YTSSGVILGSSGSGKSVFVKINEVIPAILRFPNDRVIIVDPEEEYVDIGHAFGAQVIDIY 513 Query: 533 -GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNL--------DEVHEGLLLQAVRAS 583 G FN +I D+++ + +D + AS L + L+ + Sbjct: 514 PGTKTHFN-LMDIPDLNKLRDEDKDFVGQKASLIMGLFENILQEVTDDDVSLIDRVTHLC 572 Query: 584 WLAKENR-ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 + +R + D D L + E + + + YT F + Sbjct: 573 YEQITDRTPTLKDWHDILLEQPEEE-----------AQSLALKSESYTKGSQ--DIF-AY 618 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 E ++ + ++V+ L L + L M + YI + DE Sbjct: 619 ETNVDLNNQVVIFNLKKLSGK--LKPFAMMVIQDYIWQHVVDHKDEFVTRVYFDEMQNQF 676 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 + + F K Y R++ ITQN+ S K R NS + ++LKQ Sbjct: 677 ETDDQAA--FFSKMYARIRKYGSIPTGITQNVETLLSRK---EGRNLLYNSEFLVLLKQK 731 Query: 763 AKEF 766 Sbjct: 732 KTTI 735 >UniRef50_D2S2X7 Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S2X7_9EURY Length = 893 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 107/681 (15%), Positives = 218/681 (32%), Gaps = 104/681 (15%) Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 + + PE L L+ + + +T + D + + Sbjct: 104 DKFVRTLTIHGYPERVPL--------GWLDELYTTNDHVRVTQHIQPRDTGSVLRKLQKR 155 Query: 323 YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQ---RLGSGQSSVVSYFLNITAFCKDNNET 379 L + + K +E + +++ + G++ + + + I D+ + Sbjct: 156 LTQLRARLHKKHEKSQTDTHEEEADRDMVQELIWDIILGETKLFDFAIYIEVVA-DSEQE 214 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 E + +++S E + + + P Q + + Sbjct: 215 LNEATERVVDSLSTANAEAVPLEKRQVESQDALSPLGDD--------SIKSTQLMQETAI 266 Query: 440 ANLMPLVADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 + P + P G+ N +D + ++Y+ A+ GT G+GKT + Sbjct: 267 GTMFPFIEPVITDPEGIFYGFDTTNTPVILDRYE----LSSYSKAIAGTMGSGKTFAEKH 322 Query: 499 LIRSVLDSGGFA--VVFDMGDGYKSLCENMGGVYLD-GETLRFNPFANITDIDQSAER-- 553 + L +V D + ++GG + G NP ID + + Sbjct: 323 EMYHRLMMDPEIEMLVLDPLGDFVDFANDLGGQVIRFGGDNTVNPLEIQRGIDDAVDDPF 382 Query: 554 VRDQLSVM--------ASPNGNLDEVHEGLLLQAVRASWLAKE----------NRARIDD 595 + SVM A +L + EG+L +AVR ++L I D Sbjct: 383 KKKLRSVMELFRIHFSAVAEQSLSKEQEGILRRAVRLAYLQYGITEETATHENTSPTIKD 442 Query: 596 VVDFLKN----------------ASDSEQYAESPTIRSRLDE--------MIVLLDQYTA 631 ++D L A+D + E + +R + +++ L+ + Sbjct: 443 LLDILAEIADGGLPSEFLELHGDANDERVWPEIDQLETRFRDGDEQYAYQLLLGLEAFQK 502 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK 691 G + ++ D ++VV+++ D M + +I R + + + Sbjct: 503 GGENDNL--TGRTNVELDNRLVVIDMSMFSDTGQA-PLFMHVMFDWIYQRAA-SDHDRRT 558 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF------DSDKASSA 745 IDE LL + + I+ R +R A I+Q + +F S +A+ Sbjct: 559 QVTIDEAHYLL--RREATTDMIDLFIRHSRHFNTAITLISQTVDEFVAQSDDQSKEAAEK 616 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 AR + K I + + P ++ + +D +S FLL+V Sbjct: 617 ARNVYNLCDIKQIFHHESVSDEMIDF---HDLTPSEQTFLTTAQTGEDGGYSEFLLEVNE 673 Query: 806 HSSWHRLFV------------DPLSRAM--YSSDGPDFEFV--QQKRKEGLSIHEAVWQL 849 S L V DP D D F+ + + E I E+V + Sbjct: 674 WSKPLALHVNDYEVSVLDDDLDPWEYLAENRYIDADDAGFLAAEGRLDE-YEIPESVLEK 732 Query: 850 AWKKSGPEMASLEAWLEEHEK 870 + + + E+ Sbjct: 733 VDLNEIDKEPETDEAVVENAD 753 >UniRef50_A7VXU4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXU4_9CLOT Length = 848 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 99/668 (14%), Positives = 214/668 (32%), Gaps = 69/668 (10%) Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV 209 + R + + Y + + + E+ + + L + D Sbjct: 144 SYEAVTRRFYLIYEYKGEATEFTEIS-KELADQAETAYQYLDYCGLEVLRHDNYD----- 197 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 ++ + + + + +S L Q ++ D L E + Sbjct: 198 EFLLRTVYTAYHKQSARNINFSALMEQVGPVFNTPEITEDQLEEEDSEGITTIQDVLAPT 257 Query: 270 HL----ARNPEIAFLWNMADNYSNLLNP---ELSISCPFI-----LTLTLVVEDQVKTHS 317 ++ I +++ + P L+ P I ++L+ +E + K Sbjct: 258 EADLEHSKYILIDGVYHAYLYITGYSYPTERGLAWLSPLIELGDGISLSFFLEKKRKEQI 317 Query: 318 EANLKYMDLEKKSKTSYAKWFPSVEKEAKEWG-------ELRQRLGSGQSSVVSYFLNIT 370 + + + +S+ + + + +E ++ RL I Sbjct: 318 LSKVVKTTMINRSR---LRDIEDIRADYEELDDAIYSGMYIKDRLNRDGEDFFYMHTLIE 374 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 D T + + + N + H + F + LP K K Sbjct: 375 VTALDET-TLNKRIKQVQNLCVSMDMTARRADWCHEQCFRSMLP--IAKLDMDIAKRTQ- 430 Query: 431 VQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 + + A P + G+L + N +D F + +N N+A+ G S Sbjct: 431 -RNVLTSGAAGAFPFSSFELCDNKGVLMGINLHNNSAVIVDNFNSDI-YSNGNLAIFGMS 488 Query: 489 GAGKTGLIQPLIRSVLDSGGFAVVF--DMGDGYKSLCENMGGVYLD---GETLRFNPFAN 543 GAGKT + L + G + + G Y+ CE +GG +L G N Sbjct: 489 GAGKTYTLLLLAMRLRMCGVQVFIIAPEKGFEYRCACEAIGGQFLRLSPGSEDCINLMEI 548 Query: 544 ---ITDIDQSAE------------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 DID + +V+D + + + L A+ + + Sbjct: 549 RRSTLDIDSNLANNIQRNDSVLLSKVQDLHTYIRLRYPQITPEEAYQLNIAILECYESFG 608 Query: 589 NRARIDDVVD---FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 +++ K D L + + + + G + + Sbjct: 609 ITKDNRSLLNPDGSFKAMPDFTHLYSCLLKYPSLKNVALAVKEIIDFGM------GGQTN 662 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + + +VL+ G + + + + F +I + + R+ R KK + DE W + + Sbjct: 663 VDLFSSFIVLDTSGAKKKD--ISSSTFVATSFIRDELSRS-RTRKKAVLGDELWVIAGEE 719 Query: 706 -NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 N + +FI + + R + +++ TQN +D+ + + A NS K++L+ Sbjct: 720 GNEQAADFIIEMVKLIRGYGAIFVSATQNTLDYFALRDGKFGDALLNNSRLKLLLQMEEA 779 Query: 765 EFAKYNQL 772 E K + Sbjct: 780 EAIKLQEK 787 >UniRef50_A5FU41 Type IV secretion/conjugal transfer ATPase, VirB4 family n=3 Tax=Alphaproteobacteria RepID=A5FU41_ACICJ Length = 797 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 96/618 (15%), Positives = 174/618 (28%), Gaps = 87/618 (14%) Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 F P Y+ + + S+ CP ++ T + + LK + Sbjct: 247 FGYREYPSE--------TYAGMYDGVFSLPCPVVMVHTFDFHARHTSEKRLGLKAAQMTA 298 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + + + + + L SG+ ++ + ++T + D E + Sbjct: 299 AND--------KARSQISDLADAQDHLASGKIAMGEHHFSLTVYA-DTIEELDRLSGLTR 349 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA- 447 +G + + LP G K G + N A A Sbjct: 350 TVIANSGGVVAQESAGLEAAYFAQLP-----GNRKWRTRPG---TITTRNFAAFSGFEAF 401 Query: 448 -----DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI-- 500 PA T + T A+ G G GKT + L+ Sbjct: 402 PRGQRAGKWGPAMARFRTTAGTAYDYVPHVEDVGMT----AIFGKIGQGKTTFMLFLLAL 457 Query: 501 --RSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVR 555 + G V FD G + LC +GG YL G P + + +S + Sbjct: 458 FPQYFAARNGAVVFFDKDRGGELLCRAVGGRYLVVRAGRDSGLAPLKALDNTPESVAFLV 517 Query: 556 DQLSVMASPNG--NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 L+ + +G L + L + V+A + + + FL + Sbjct: 518 QWLTALIQQDGHGPLPPEDDARLTRGVQALLRLAPDMRSLAGLRQFLDWRNPMGA----- 572 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 L+++ G+ G F+ + + +A V +L + D ++ Sbjct: 573 ---------GARLERWCKGGSLGWAFDGERDDVSLEATTVGFDLTAILDNGTVCAPAANY 623 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 L+ I + + + DE L N + T R+ + TQ Sbjct: 624 LLYRISQAL----DGRRFVLSCDEFNFYL--LNPLFAKIWADFMLTVRKSNAVVLLATQE 677 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKE---FAKYNQLYPDQFLPLQRDMIGKFGA 790 S + + E + K +F + DM+ Sbjct: 678 P---APVLDSPQGDSILRQCQTLVFCPTPGAEEHLYRKRLNFTAGEFRAIAEDMLPNSR- 733 Query: 791 AKDQWFSSFLLQVENHSSW--HRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQ 848 L++ S+ L P A+ SS FV+Q R A Sbjct: 734 -------QLLIKRHGGSAIIDFDLSALPEFVAILSSRKSSVGFVEQLRATHGDDPAA--- 783 Query: 849 LAWKKSGPEMASLEAWLE 866 MA +E Sbjct: 784 ----WLPAFMARFHEEVE 797 >UniRef50_C3RPG7 Predicted protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RPG7_9MOLU Length = 610 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 93/577 (16%), Positives = 181/577 (31%), Gaps = 74/577 (12%) Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCP----------FILTLTLVVE---DQVKT 315 F P + + + ++ + F+ VE + K Sbjct: 12 FKSRAVPRGFHEYANYYVIGDKFHRAMTFTITKDFDEGFLGMFVAGQNYRVEMVTEPSKA 71 Query: 316 HSEANLKY--MDLEKKSKTSYAKWF-PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 +K D+E++ + + + ++ + + L + IT F Sbjct: 72 KISNYMKTVVKDMEQEYSKTTDRIQRAELREQMDGYNAYIRELVR--KRDATLNCIITVF 129 Query: 373 CK-DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 + + E E D+ F E+ + RF R PF G K+ + + Sbjct: 130 IEANTLEELDERTYDLDKLFSTYNVEVRAERFLQQRILKCSSPFFESDGFRKEASQ-NIG 188 Query: 432 QRAESFNVANLMPLVADNPLTPAGLLAPTYRNQ--LAFIDIFFRGMN--------NTNYN 481 Q + V+ L P D G+L +Q + D F N N N Sbjct: 189 QLLSTQTVSGLYPFTFDTLDDEKGMLLGVESSQKGMVCFDQFLYLNNPAKAKKYKRLNGN 248 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFN 539 + + G SG+GKT + ++ S + + D + +++ + GG Y + + R N Sbjct: 249 LIIIGESGSGKTTAMDLILMSHICHTRKVIWIDPENKNRTIIKQAGGSYFNLGTKNARIN 308 Query: 540 PFAN------------ITDIDQSAER---VRDQLSVMASPNGNLDEVHEGLLLQAVRASW 584 F + D V D V + ++ E +L + V ++ Sbjct: 309 IFDLKPISCDEDEEDEVDKYDTRLAIYNVVEDIKIVFRYLSKDISEGALDILGELVLEAY 368 Query: 585 LAKENRARIDDVVDFLKNAS----------------DSEQYAESPTIRSRLDEMIVLLDQ 628 I++ +LKN E+ + L E+ + L Sbjct: 369 ETVG--VNINESFQYLKNTDYPTFSVFSAIVDEHIEKFEKSNIVNDEYTALKEIRIKLKP 426 Query: 629 YTANGTYGQYFNSDEP--SLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIYIENRMYRT 685 + +Y + + P L A+M + Y Sbjct: 427 ICTE--WARYLDGHTTITEDEMKNPFFAFGTKVFFNLTPGLKNALMHIIFQYAWG--LCL 482 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 + + +DE + + + IE+ R +R++ I TQ DF + + Sbjct: 483 DETSESVLAVDEAHMFVLA--GETAKMIEQFQRRSRKYHNVTILGTQEPHDFADPRVLAE 540 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 +A + N+SYK+IL +L ++R Sbjct: 541 GKAIFNNASYKLILGLDKDATKDLRKLTALSDNEIKR 577 >UniRef50_D0RX90 PrgJ n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=D0RX90_9STRE Length = 795 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 103/692 (14%), Positives = 225/692 (32%), Gaps = 82/692 (11%) Query: 122 EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV--FISYCSPSKKKSRADILEM 179 E A N I R Y +F L ++++V +I+ + + +K+ AD ++ Sbjct: 117 EPAGDCNDIYRDEYNDIIQERFSL--------DAKNFKVEKYITLATEAYEKNLADT-QL 167 Query: 180 ENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVE 239 + + ++ LQ +I+ + + + I ++ P Y + V Sbjct: 168 QEMGTLVENELQAMNISLKKLSGIERLGIFNFLLRQQPYFAYTYKDIALSGLAAKNFIVP 227 Query: 240 DSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC 299 + ++ +++ + + ++ P + + + I Sbjct: 228 N--RIEFHENFMKIDGQ--------FAKVLYVRDYPNFLS----DKLIKSFCD--IGIEL 271 Query: 300 PFILTLTLV----VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE--KEAKEWGELRQ 353 + + V ++ + M +K + P + A E E Q Sbjct: 272 AVSIHVAPRELGEVGKELSNEQSVAQEEMVRSQK-EGFQVGIDPGLAVSGRAVEASETTQ 330 Query: 354 RLGSGQSSVVSYFLNITA--FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT 411 + + F + F D+ E + + + + RK G +L ++ T Sbjct: 331 KWKDKVNEDQKIFNGVITVYFVADSLEELQQSTKKVQAAGRKLGVDLEETYYHQENGLNT 390 Query: 412 CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLA-FIDI 470 LP K+ ++ + NV +P + + + +NQL+ + Sbjct: 391 ILPIGKPFLEVKK----EFMRPFTTSNVVTQVPFTNVDLQSDSQRALYYGQNQLSKNLIT 446 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQP---LIRSVLDSGGFAVVFDMGDGYKSLCENMG 527 R + N + GT+G+GK + + + ++ D + Y + E G Sbjct: 447 LDRQRDLNAANGLIIGTTGSGKGMTTKTTEVIPAYLKYLKDRFIIVDPENEYTDIAEAFG 506 Query: 528 GVYLDGETLR---FNPF-----------ANITDIDQSAERVRDQLSVMASPNGNLDEVHE 573 G ++ N N +ID A++ +++ S + + Sbjct: 507 GQVINLSPKSDSHINLMGLTQTDQVLFNENDEEIDSVADKANLLMALFESILKEVTDEDI 566 Query: 574 GLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 G++ + V + + + D D L + ++ + Y Sbjct: 567 GIIDR-VTKLVYERYSEPTLADWHDILLEQPE-----------DAAQQLATRSEPYAKGS 614 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 F S + ++ D ++VV L GL L + L +I ++ + Sbjct: 615 L--NLF-SYKTNVNLDNRLVVFNLKGL--DKKLKPFALLVLQDFIWQQVIKYQGKETIRL 669 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 DE L F+N F + + R++ ITQN + A R N+ Sbjct: 670 YWDELH--LTFRNQTDAAFFAELWARIRKYGAIPTGITQNPG---TILAWEEGRNLMSNT 724 Query: 754 SYKIILKQSAKEFAKYNQLY--PDQFLPLQRD 783 + I+LK ++ + PD L + Sbjct: 725 EFFILLKMREQDIEALRDVVDIPDAMLRYIKR 756 >UniRef50_A9I2D7 Type IV secretion system protein VirB4 n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2D7_BORPD Length = 814 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 94/547 (17%), Positives = 169/547 (30%), Gaps = 67/547 (12%) Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 E L S + + + + + D E + + + F Sbjct: 309 EAMDDLTSARLGLGDHHATMLIY-GDTAEGVRQALAQTATALAEEAVGFRPLDRALEAGF 367 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTYR 462 LP G + S N L NP PA L T Sbjct: 368 WAQLP-----GNWHW---RPRPVPITSLNFLCFSSLHNQLTGKPVGNPWGPAVTLLKTQT 419 Query: 463 NQLAFIDIF------FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 F + N + G +G GKT L L+ G VV+D Sbjct: 420 GSPFFFNFHASTEDLDETGKRRPGNTMIIGMTGTGKTVLQGMLLTQAQKFGATCVVWDKD 479 Query: 517 DGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHE 573 G + L +GG Y + GE +NPF A VR + + + + Sbjct: 480 QGMQVLIMALGGRYFNIRLGEATGWNPFQMEPTKGNVAFMVRLVVFLAERRGEAVTTRQQ 539 Query: 574 GLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 + QAV+ ID L + + + L + +G Sbjct: 540 ADITQAVQQL------TTLIDREARTLSTL--NTLLPNPYSDDETTSTIHARLAPWCQSG 591 Query: 634 TYGQYFNSDEPSLRDDAK-----MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 YG F++ L + +L L D ++ A Y+++R+ Sbjct: 592 EYGWVFDNPADELSLATDTGKPAIFGFDLTELLDDGAVRGAATM----YLKHRIDALHDG 647 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 + +N+ DE L K+ E ++ RT R+ G TQ + + Sbjct: 648 RRIINLYDECQHPL--KDRHFQEDMQDASRTIRKKNGVLAFATQEPGAITEN---PVGPS 702 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS 808 ++ I+L + Y + + P + +++ G A + FL++ + + Sbjct: 703 LVQQTATLILLPNPRAKARDYIEGF--GLSPTEFELLKSLGEASRK----FLVKQGSSVT 756 Query: 809 WHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSG-PEMASLEAWLEE 867 +L + S D + G S A+ + A ++G +A L +L+ Sbjct: 757 VAQLDL---------SGCED----ELLVFSGSSDMAAIAEQAVAQAGHDPVAWLPVYLDL 803 Query: 868 HEKYRSV 874 ++ R Sbjct: 804 VKQSRQT 810 >UniRef50_Q21QJ8 Type IV secretory pathway VirB4 components-like n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21QJ8_RHOFD Length = 831 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 103/689 (14%), Positives = 212/689 (30%), Gaps = 96/689 (13%) Query: 169 KKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLD 228 ++K +A +E+ + + + ++ + + + + + + ++ S Sbjct: 173 ERKMQAAKTALEDKLLSLESGMRNLGL--RRLGEERLMAELYNRVSPASPSRTAYPVPTI 230 Query: 229 PYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYS 288 P N C + L+ D L + + F A+ Sbjct: 231 PSFLSNMLCSD---SLRRTPDALVFTNEKEKYVGVVSLKGFS-----------GNAETVV 276 Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEAN-------LKYMDLEKKSKTSYAKWFPSV 341 + L+ +I + D+ K + + T++AK P+ Sbjct: 277 SQLDWLTTIEGEITVAHCFRFIDRDVAQKTIEDIERYNISKSVPFFHRMYTTFAKTEPTK 336 Query: 342 EKEAK-----EWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGF 396 E + + L + + L + F D E V Q ++ + + + F Sbjct: 337 FNEGRLAMALDAKAALVDLYQANRAFGHHNLTVLCF-GDTYEEMKRVRQQVVENLKFSRF 395 Query: 397 ELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL----- 451 R + + F LP G + G N A++ P+ Sbjct: 396 NGHVERMHQLTAFTQTLPGQWGASVRWNFVSFG--------NAADIAPIRTLTKGPEKCV 447 Query: 452 ---------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS 502 PA PT AFID++ RG+ ++ V G + AGK+ L+ Sbjct: 448 HFEKEIKREFPALTSIPTTAGTPAFIDLWERGVG----HLKVIGPTRAGKSTATNFLLSQ 503 Query: 503 VLD-SGGFAVVFDMGDGYKSLCENMGGVYLD-----GETLRFNPFANITDIDQSAERVRD 556 +V D + GV++D R P + + V Sbjct: 504 FRKYEPCRTIVIDKNYSCRIATLLQDGVHVDLNQSAKNGTRMAPLSLLGHERHHGFLVNW 563 Query: 557 QLSVMASPNGNL--DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 + ++ S + + Q++R R+ +L + Sbjct: 564 VIELIESGRNGVMCSPAEIDRITQSIRGLAELGRKHWRL----HYLATSLGP-------- 611 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 ++ L ++ A G G +F+++ + + + E L + M L Sbjct: 612 ------DLGAYLGRWIAGGADGNWFDNEPEEVEIG-RHICFECQDLFGNKVVAGLAMSYL 664 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 IE + +P + I+E W LD N K + I+ RT + G+ +TQ + Sbjct: 665 FYLIEGLLDDSP----TIVSIEETWFFLD--NEKFAKKIDDFLRTLGKRNGSLWIVTQTM 718 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 + + + N I L + ++LY + L ++ A + Sbjct: 719 KEIQECSIKT---SIMSNIPNTIYLP--DQNIMNSSELYIEAAGLLPEEIQRIAEATDKK 773 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYS 823 + L+ + S L + S Sbjct: 774 HY---YLKTPSISRMLDLELPEEIVVCIS 799 >UniRef50_P17794 Protein virB4 n=18 Tax=root RepID=VIRB4_AGRT5 Length = 789 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 128/847 (15%), Positives = 260/847 (30%), Gaps = 105/847 (12%) Query: 43 LLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALDHMLRTKLPRGIP 95 LPY + + + + D ++ G E N A + +LR + Sbjct: 15 YLPYVGHVSDHIVLLEDGSIMTMAHVSGMAFELEDAEMRNAR-CRAFNTLLRNIADDHVS 73 Query: 96 LCIHLMSSQLVGDRIEYGLRE-----FSWSGEQAERFNAITRAYYMKAAATQFPLPEGMN 150 + HL+ V R S + E+ + R + G Sbjct: 74 IYAHLVRHDDVPPSPARHFRSAFSASLSEAFEERVLSGKLLRNDHFLTLIVSPRAALGKV 133 Query: 151 LPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 + YR + A +E+L ++ +L+ + + + + D++ Sbjct: 134 RRRFTKRYRQ-------KENDLTAQTRNLEDLWHLVAGALEAYGL--RRLGIREKQDVLF 184 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR--ENGRNSTARILN 268 + + R P V S + D + G R E + + + Sbjct: 185 TEVGEALRLIMTGRFTPVP-------VVSGSLGASIYTDRVICGKRGLEIRTPKDSYVGS 237 Query: 269 -FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLE 327 + P A +LN LS+ P +LT + + + HS+ +LK + Sbjct: 238 IYSFREYP--------ATTRPGMLNVLLSLDFPLVLTQSFSFLTRSQAHSKLSLKSSQML 289 Query: 328 KKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDI 387 + + + E L S + + ++ +++ + D N + Sbjct: 290 SSGDKAV--------TQISKLSEAEDALASNEFVLGAHHVSLCIYANDLN-NLADRGARA 340 Query: 388 LNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL--MPL 445 G ++ + + LP G +K G + + + P Sbjct: 341 RTRLADAGAVVVQEGIGMEAAYWSQLP-----GNYKWRTRPGAITSRNFAGLVSFENFP- 394 Query: 446 VADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI----R 501 +A N D + + A+ G G GKT L+ ++ + Sbjct: 395 EGSGSGHWGNAIARFRTNGGTPFD--YIPHEHDVGMTAIFGPIGRGKTTLMTFILAMLEQ 452 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQL 558 S++D G V+FD G + L GG YL G P + + S + +R+ + Sbjct: 453 SMVDRAGAVVLFDKDRGSELLVRATGGTYLALRRGAPSGLAPLRGLENTAASHDFLREWI 512 Query: 559 SVMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIR 616 + +G + L++ + + I + +FL + Sbjct: 513 VALIESDGRGGISPEENRRLVRGIHRQLSFDPHMRSIAGLREFL--------------LH 558 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 + L ++ G F+ + ++ D + ++ L + + A L+ Sbjct: 559 GPAEGAGARLQRWCRGNALGWAFDGELDEVKLDPSITGFDMTHLLEYEEVCAAAAAYLLH 618 Query: 677 YIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 I + + + DE L N K ++K T R++ G I TQ Sbjct: 619 RIGAMV----DGRRFVMSCDEFRAYL--LNPKFAAVVDKFLLTVRKNNGMLILATQQPEH 672 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKY---NQLYPDQFLPLQRDMIGKFGAAKD 793 S + KI + + Y + +F ++ DM Sbjct: 673 VLE---SQLGASLVAQCMTKIFYPSPTADRSAYIDGLKCTEKEFQAIREDMAVGSRK--- 726 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSR--AMYSSDGPDFEFVQQKRK-EGLSIHEAVWQLA 850 FLL+ E+ S + + A+ S F Q RK +G + + + Sbjct: 727 -----FLLKRESGSVVCEFDLREMREYVAVLSGRANTVRFADQLRKVQGDNPSAWLSEFM 781 Query: 851 WKKSGPE 857 + + Sbjct: 782 ARYHEAK 788 >UniRef50_C6LA09 Putative TRSE protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA09_9FIRM Length = 835 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 104/794 (13%), Positives = 254/794 (31%), Gaps = 75/794 (9%) Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 I ++++ DR+ + + G E ++ R + + + Sbjct: 89 IEIINNNWNMDRVRQDIFLHNRDGRFGEMVESLNRHIEDSMMKGRAGIEQ---------- 138 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP 217 R+FI C +K ++ + + +DA + + Sbjct: 139 VRLFIITCR--RKNIEQARNYFVSVEANLAVNFDRMQSGLVPLDATERLRYLHAFYRQGQ 196 Query: 218 DSLYPKRRQLDPYSDLN-YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPE 276 ++ Y + + + + + +Y T + T + ++ + P Sbjct: 197 ETKYDFDFKTAIRRGTDWRDIISPAVVKHYQDEYGTFDGITVQMDGT-YVRALYVPQLPN 255 Query: 277 IAFLWNMADNYSNLLNPELSISCPFILTLTL--VVEDQVKTHSEANLKYMDLEKKSKTSY 334 + S + L++ I + + D ++ A K K+ Sbjct: 256 SIEPGIIQKLMSGPYHVILTLDTAAIPKQAVKKRLIDLYVQNARAIEKQQQTRNKAMAWS 315 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 + +E E + + + + +V + Sbjct: 316 SDITYERRRERDELENYMDIVNENDEKMFYLGIYAVISAGSKKQLENDVTA-FCSMAEGE 374 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 GF + + T LP A + V+Q + + L P V P Sbjct: 375 GFSFEPAIWEQIEAINTALPTGA--------RFCSVMQPVFTQPLCALTPFVVQELYQPG 426 Query: 455 GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAVVF 513 GL NQ++ + N N + G +G GK+ + +I+ L + ++ Sbjct: 427 GLFYGI--NQVSKNVLIGDRKLLKNGNGFILGITGGGKSVETKMEIIQVYLHTTDDIIII 484 Query: 514 DMGDGYKSLCENMGGVYLDGETLR---FNPFAN--ITDIDQSAERVRDQLSVMASPNGNL 568 D + Y+ + + +GG ++D NP ++ + + D+ +M + + Sbjct: 485 DPQNEYRDIVDYLGGTFIDFGAESGHYINPLDTGTYEYMESKRKFIADKTELMLAIFSQI 544 Query: 569 DEVH-----EGLLLQAVRASWLAKENRAR-----IDDVVDFLKNASDSEQYAESPTIRSR 618 E + L+ + VR + +++ +V++ + + + + Sbjct: 545 LEYEISAQDKSLIGRCVREVFADMDDKTGRKKRQPPTLVEYYECMKRQREPQAAQLALAL 604 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + LD + + ++ A++ + L S + ++ I Sbjct: 605 ELFVSGSLDMFAR-----------QTNVDTRARLTAYGMENLGKEQS--ATGITVMLEGI 651 Query: 679 ENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 +R+ + ++E L + +EK ++ R+ G ITQNI D Sbjct: 652 RSRIAENAAKGRATRLYVEEFHNL--AGDPYSANILEKRWKEVRKMGGLCTGITQNIRDL 709 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 S A NS Y +L QS E + +++ + +++ A+ Sbjct: 710 TQ---SKAIETMLCNSEYLSLLCQSDIEIDIFRRIF-----GISENLLAYLKNAESG--- 758 Query: 798 SFLLQVENHSSW--HRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI---HEAVWQLAWK 852 LL+ + R+ D +++++ + + ++K++ S+ +A+ +L Sbjct: 759 CGLLKFGDRYIPKDGRIPKDSEMYRLFNTNFHEIQAQKRKKQRTGSLQKQVDALPELVLS 818 Query: 853 KSGPEMASLEAWLE 866 ++ E + Sbjct: 819 EAEAHPTEAEQIYQ 832 >UniRef50_Q46698 TraB protein n=9 Tax=root RepID=Q46698_ECOLX Length = 866 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 100/609 (16%), Positives = 197/609 (32%), Gaps = 81/609 (13%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 LN ++LT + + + + L++ + + + + Sbjct: 305 GQLNMLKEADFEYLLTQSFSCLSESSAKTFLTHQEKSLQETRDRA--------QSQLAQL 356 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV-EQDILNSFRKNGFELISPRFNHMR 407 G L S + V + + T DN++ A++ + + G + Sbjct: 357 GTALDMLTSRE--FVMGYHHGTVHVWDNDQNAVQAKARRVKVMLTGCGVVGGTLSLASEA 414 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-------ADNPLTPAGLLAPT 460 + LP K A S+N + P +NP PA + T Sbjct: 415 AYYRRLPGNQ--------KWAPRPVPINSWNFLHFSPFHNFMRGKPDNNPWGPALTMFRT 466 Query: 461 YRNQLAFIDIFFRGMNNTNY------NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD 514 + + + +Y + + G SG GKT L+ L+ + V+D Sbjct: 467 ISGTPLYFNFHVTPLEELSYGKRPLGHALITGMSGEGKTTLLNFLLAQSMKYNPRLFVYD 526 Query: 515 MGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMAS--PNGNLD 569 G + ++GG Y G F P I ++ +++ + NG + Sbjct: 527 RDRGMEPFIRSVGGYYKVLQQGMPSGFAPLQ-IEPTKRNNALIKNLFRICVETTNNGPIS 585 Query: 570 EVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQY 629 L + V A + + + + Y + + LL ++ Sbjct: 586 ATMATELAEGVDAVMGEG------SLIPREARTVTILDGYVNE--VVENGVSLKGLLREW 637 Query: 630 TANGTYGQYFNSDEPSLRDD-AKMVVLELGG-LEDRPSLLVAVMFSLIIYIENRMYRTPR 687 T G YG F++D+ SL + +L + + + LI+Y+ R+ + Sbjct: 638 TREGQYGWLFDNDKDSLDLSANDIFGFDLSEFIAAKEEVSSPARTPLIVYLLYRVRDSID 697 Query: 688 NLKKLN-VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAA 746 +++ DE LD + + +++G +T R+ Y+ TQ D S S Sbjct: 698 GKRRVIQCFDEFHAYLD--DPVIEREVKRGIKTDRKKDAIYVFATQEPNDALS---SRIG 752 Query: 747 RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENH 806 R + KI L+ Y L ++ L + + FL++ Sbjct: 753 RTIMSQTVTKICLRDPEAIREDYAFLTDAEYDAL---------MSITEHSRQFLVKQGQQ 803 Query: 807 SSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI-------HEAVWQLAWKKSGPEMA 859 S+ S +Y + D + + LS+ E +L + Sbjct: 804 SAIA-------SFNLYPRNSDDIDADIKTMDNVLSVLSGEPQNAEIAHELVERLGNDP-- 854 Query: 860 SLEAWLEEH 868 E WL+E+ Sbjct: 855 --EVWLKEY 861 >UniRef50_Q9F245 ATPase n=3 Tax=Aggregatibacter actinomycetemcomitans RepID=Q9F245_AGGAC Length = 923 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 90/544 (16%), Positives = 171/544 (31%), Gaps = 79/544 (14%) Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 + + I+ +++T + + + + L ++ + + Sbjct: 363 GFFDALMYINADYVITQSFQAMPSNVAKEKLDRQQKRLNSSNEAAI--------SQVDNL 414 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 L SG+ S Y + + D+ + + +I+ G + + Sbjct: 415 TVALDDLASGRLSFGYYHFGMMVY-GDSIKDVTDKTNEIIAVLSSLGLIITLANTALSAS 473 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTY 461 + P + S N A+L L NP A L T Sbjct: 474 YFGQFPANFAY--------RPRLAMLSSRNYASLTSLHNFASGKCNGNPWGDAVTLVKTP 525 Query: 462 RNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRSV------------ 503 Q + + + N AV G +G+GKT L+ L+ + Sbjct: 526 NAQPYYFNFHQSAPGVDDRGEKRLGNTAVFGQAGSGKTMLMTFLMTQLDKFRHTSTFLPT 585 Query: 504 -LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLS 559 + V D G ++ MGG Y+ G FNPF + ++ + + Sbjct: 586 SVKRELTMVYLDKDYGAEACIRAMGGKYMLIRKGVPTGFNPF-MCENTPENLSFLSTLMK 644 Query: 560 VMASPNGN-LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 ++ + NG L + E L +AV++ D + E E T + Sbjct: 645 MLVTRNGRTLSSLDEEELFKAVKSVME-------FDMEYRSYPISRVVEHLPEGSTKAEK 697 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV-VLELGGLEDRPSLLVAVMFSLIIY 677 + + L + G +G F++ +L V ++ D + F L+ Sbjct: 698 ENSLARRLKNWAQGGEFGWVFDNPADTLDFTGHAVFGIDGTEFLDDQDTCSPLSFYLLHR 757 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 I + + + +DE W+ L K+ +F + R+ G I +TQ++ + Sbjct: 758 IGKLL----DGRRLIIFMDEFWKWL--KDEAFSDFAYNKLKVIRKEDGIVIPMTQSMDEV 811 Query: 738 DSDKASSAARAAWGNSSYKIILKQ--------------SAKEFAKYNQLYPDQFLPLQRD 783 S +RA I L S K+F +L PD L R Sbjct: 812 LK---SPISRAVVEECETTICLPNPIARKVDYVDGFGISEKQFEIIRELQPDSRTFLVRK 868 Query: 784 MIGK 787 + Sbjct: 869 GLET 872 >UniRef50_D2B290 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B290_STRRD Length = 830 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 98/703 (13%), Positives = 217/703 (30%), Gaps = 99/703 (14%) Query: 173 RADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV------GEMINHNPDSLYPKRRQ 226 +A+I + + + +L +++ + + I + G + + P + +R Sbjct: 157 KAEIAKWSEQAERLGRALSASALYARHATSTE-IAWLFQHAATGSLGDPPPSASPKRRWG 215 Query: 227 LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 L + + L LR + + AR P++ + Sbjct: 216 QGEIESLVEGQIHNGRSL----------LRIEQPQGDSYVAYLSFARFPDLMPFPDGEP- 264 Query: 287 YSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK---YMDLEKKSKTSYAKWFPSVEK 343 ++ + P ++ + + VK + K D++ + + A+ ++ + Sbjct: 265 ---WMHFADQLPFPVEISSRMRLISPVKASKDVARKLAHARDMDIHIREAGAEAPLALAE 321 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF 403 + L + + V + + E ++ + ++ +R G ++++ Sbjct: 322 QIDAARMLEHGITKERLPFVYGWHRLIVSAP-TEEICVQRVEAVVEHYRDMGIDIVNSTG 380 Query: 404 NHMRNFLTCLPF----MAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP 459 + F LP + + L+ + ++ + + P Sbjct: 381 DQFSLFCEALPGERVRVNAYAQRQPLRTIAGGMATATVDLGDRADEGNAGWMGPYVGETL 440 Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 + D N +A+ G G GKT L +I + G V D Sbjct: 441 GRARSIVHFDPLVAATRNRPTAIAITGEPGGGKTTLALLMIYQMALRGVTVAVIDPKGDA 500 Query: 520 KSLCENMG--GVYLDGETLR------FNPFANITDIDQSAERVRDQLSVMASPNGNLDEV 571 SL + + G L +PF+ DI + L ++ + E Sbjct: 501 DSLVQLLQRRGRKARVIPLGSAAPGLLDPFSFGDDIAAKKTMASETLRLLL---PRMSEE 557 Query: 572 HEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 E ++QAV A + + VVDFL+ D+ +RS + + L + Sbjct: 558 RESAMIQAVAAV--SNGEDPSLGKVVDFLEQTEDAASKNLGAVLRSMSEMHLARLCFDPS 615 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGL------------EDRPSLLVAVMFSLIIYIE 679 G + + V LGGL L VA+++ + + Sbjct: 616 GG----------DQIDTEGWTTVFTLGGLTLPDASTGRDDYSYEQRLSVALLYLVAQFAR 665 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 M R K +DE W + + + + + R R A + ++QN D + Sbjct: 666 GLMNGLDRRTPKAIFLDEAWAI--TSTPEGAKLVPEVSRMGRSRNTALVLVSQNAGDLLN 723 Query: 740 DKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSF 799 ++ + N + + + ++ ++ G + + Sbjct: 724 EQVT--------NC------------LSSVFAFRSTERVEVE-HVMALLGVEPSEEHKAI 762 Query: 800 LLQVENHSSWHR------------LFVDPLSRAMYSSDGPDFE 830 L + N R L D L R + ++ D Sbjct: 763 LRSLGNGECVFRDLDGRAGRIGVDLISDELVRWLDTNPTHDKP 805 >UniRef50_A7VRX8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VRX8_9CLOT Length = 800 Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 118/822 (14%), Positives = 255/822 (31%), Gaps = 94/822 (11%) Query: 50 NQESGLFMNDTTMGFMLEAIPINGA--NESIVEALDHMLRTKLPRGIPLCIHLMSSQLVG 107 +Q S + + + F+L P+N + ++ +V L L L I +++ Sbjct: 26 DQSSVITPDGQRISFIL-ITPVNMSVLSDEVVAGRISALANILTSIENLQILCLNASQSY 84 Query: 108 DRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSP 167 ++ + L E E + R + + G +R Sbjct: 85 EKNKEHLAA-QMKTETNEVLAELDRKDIEYLDDIRISMATGREFAFAVRF---------- 133 Query: 168 SKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN-PDSLYPKRRQ 226 K + E +K + L A T + + Q I+ + + +P Sbjct: 134 ---KKNIGRPQQEQTLKRLLLILLEAGFTARIAEEQELKGILAIYFAQDIYNDYWPDFDG 190 Query: 227 LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 + S + + +L + + + + + + P + Sbjct: 191 EEILSPAEAKQEKSFLEL-IAPSIIDFRRQRYYVCGNTQRTVWAVRGYPTTTKDQTIFRE 249 Query: 287 YSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAK 346 E I T + + K A + + S K E + Sbjct: 250 LG-----EKDGVTLHIYTRPVGSYETNKILERAERRNRHMLNNSSRIKEKV--EAESNMQ 302 Query: 347 EWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 + L + + + + N+ ALE+ Q + + L F Sbjct: 303 DVQLLIENMHRSKEPF--LHCAVFIEMAAGNDKALELLQGDVAAILNRHKILYDKLFLQQ 360 Query: 407 -RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQ 464 ++ +P + L E + + +VAN+ P P G+ Sbjct: 361 KEGMISAMPTG------QNLFENQFERVLPASSVANMFPFSYSGKTDPQGMYIGRDANGS 414 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 ++ RG + TN ++ + G SG GK+ L++ L S + D + YK L E Sbjct: 415 NIIVNFDQRGQDKTNGHIIILGNSGEGKSFLLKILSCIFRQSRKNLYILDPENEYKELTE 474 Query: 525 NMGGVYLDGETLR--FNPF-------ANITDIDQ--------SAERVRDQLSVMAS---- 563 +GG Y+D T + NP +++++ R+ ++ + Sbjct: 475 ALGGTYMDMMTGKYIINPLEPRLWNQEPVSELESPDTPKAFFKPLRINQHIAFLRDFFSA 534 Query: 564 ----PNGNLDEVHEGLLLQAVRASW----------LAKENRARIDDVVDF----LKNASD 605 P LD + ++L+ + + L + + D+ L+N + Sbjct: 535 YKPFPTEQLDTLE--IMLELLYKEFHITEETDYSRLRSSDYPILTDLYKLMTRELENYEE 592 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG-LEDRP 664 + + L E+ + L G YFN + +AK + + L Sbjct: 593 KAETGLVVYRKETLRELCLGLHGICT-GAESVYFNGY--TNIPNAKHIDFGVKDMLSTNQ 649 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 SL A+ F+++ ++ ++ DE LL KN ++ + R+ Sbjct: 650 SLSNAMYFNILSFMSHKFLTEGDTN---ICCDELHELL--KNRIAISYLLSFIKRGRKRG 704 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 I +QN+ DF + + +++ + + + +Y ++ + + Sbjct: 705 SNVILASQNVSDFFLPEIVEYTKPLLSIPTHRFLFYPGSCDTEEYKRVL--GVSDSEYRV 762 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 I H + +A++ + G Sbjct: 763 IQNPNRGH-----CLYSCGNERYHLH-VIAPKYKKALFGTAG 798 >UniRef50_C8WH82 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WH82_EGGLE Length = 836 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 108/797 (13%), Positives = 249/797 (31%), Gaps = 109/797 (13%) Query: 76 ESIVEALDHM--LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA 133 E+ M L + + + ++ + I R F S + + + Sbjct: 98 ENQQSVFAAMSELYDYFGSETSVQLTITNTPIPEREIGRK-RFFEKSDPRVDEYVEEYNR 156 Query: 134 YYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGA 193 +RH + A + +L Sbjct: 157 ILNDKMREGVSN--------LVRHRYLTFLV---GADDLDAAAPRLARARGDCMQTLARI 205 Query: 194 SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 + +D +++V + + + + + S L + D Sbjct: 206 RCEARMLDGAERLELVQSQLRPKAEFTFSWDKLSQLSGLRTKDLIAPSV-LDFKPDGRAD 264 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNM-ADNYSNLLNPELSISCPFILTLTLVVEDQ 312 R +G + R+L F F ++ D +N+++ + P +TL + + Sbjct: 265 CYRADG--TWCRVLVF-------RGFGSDLEDDCIANVVD----LPMPLNVTLHIHPMGK 311 Query: 313 VKTHSEANLKYMDLEK----------KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 + + ++K K ++ P + +E EL +L + + Sbjct: 312 AAAVAYVKKRIAWMDKEVIDEQMSAVKKGYDFSILPPELSHSKEEAEELLDQLQNKNQRL 371 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 +Y + + D E + I+ + R+ E+ + + + LP Sbjct: 372 FTYTGLVFTYA-DTAEALDHQTRQIMAAARQRSIEVEPLSYRQRQGMNSILPLGLNH--- 427 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR--NQLAFIDIFFRGMNNTNY 480 V + + + MP + G + L + + Sbjct: 428 -----VEVSRYMTTAQIVIQMPFASQELNQEGGGYYGQSKQSGNLVICN----RKKLASP 478 Query: 481 NMAVCGTSGAGKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET--- 535 VCG G+GK+ ++ I + + +VFD Y + E GG + Sbjct: 479 MGFVCGKPGSGKSFSVKREIMNTILAYPDDEVIVFDPAGEYAPVVEPAGGTCIRFSPDTD 538 Query: 536 LRFNPFANITDIDQSAE-----RVRDQL----SVMASPNGNLDEVHEGLLLQAVRASWLA 586 NPF D++ + ++ L + MA L E + ++ + V +++ Sbjct: 539 TFMNPFDLSDVADKANQAQLAFKIDAILALSSATMAEGREGLPEADKSIISRCVELAYMR 598 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 E + R+ + DF + + E+ ++ + ++Y +FN + ++ Sbjct: 599 CEGKGRLPVLGDFYELLLEQEEPE--------ARDIALRYERYVKGAL--SFFN-HQSNV 647 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFK 705 ++ ++ L + M + + + NRMY R + IDE L F Sbjct: 648 GFTNRITNVDFKDLSQNMRVFG--MLTALEAVRNRMYANFERGVTTWLYIDEVQSL--FG 703 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + + + K + R+ ITQN + AR NS + ++ KQS + Sbjct: 704 HPAIISYFSKFWAEGRKFNLICTGITQNSTYMLEHED---ARNMVLNSDFVLLHKQSHLD 760 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW---HRLFV-DPLS--- 818 + L +A+++ + ++ R+ + D Sbjct: 761 RKSWVDLL--------------ALSAQEEGYIDDSIKAGEGLLVAGGVRVPLKDDFPKGA 806 Query: 819 -RAMYSSDGPDFEFVQQ 834 ++++ + +++ Sbjct: 807 LYDLFNTKPEEIAQIKR 823 >UniRef50_Q6F059 Uncharacterized protein pXO2-09/BXB0008/GBAA_pXO2_0008 n=16 Tax=Bacillus cereus group RepID=Y6508_BACAN Length = 644 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 77/548 (14%), Positives = 172/548 (31%), Gaps = 84/548 (15%) Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFL 367 VV+D ++ +E + + + A W E + + + + V L Sbjct: 85 VVKDINRSITELKDRMTSERRSTDRDDAHW------ELQNLTDFARSITQQGEIVKLVKL 138 Query: 368 NITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 I + E + DI ++ F + T A + Sbjct: 139 RIYIYDPV-LEQLEKRIGDIKKEIAGQNYKAQVYVFKQKEEWQT---LFASYDDQIEYLG 194 Query: 428 AGVVQRAESFNVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 S N+ +P + P G+ L T +D FF T+++ + G Sbjct: 195 VKSGYPLPSKNIGFGIPFHHQDLKDPRGIYLGQTSTGGAFILDPFFSTGTRTSFSGFIFG 254 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR--------- 537 GAGK+ L++ L ++ F FD Y ++ + GG +D ++ Sbjct: 255 KMGAGKSTLLKQLEEGLVAKDCFIRGFDKARDYYTVVQQQGGKIIDLSGVQDSEEVETGM 314 Query: 538 FNPFANITD-------IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASW------ 584 NP +D+ ++ V E + ++ + + + Sbjct: 315 INPLEVFATKITNTGAVDEKGSFIQHISKVTNMIRFLNTEFDDTVIQEFRKHLYAFYIEW 374 Query: 585 ----------------LAKENRARIDDVVDFLKNAS-----DSEQYAESPTIRSRLDEMI 623 + ++D +L N +++ + I+ ++++MI Sbjct: 375 GLVPQKGSDRPYKVTGYPPNHYPILEDFYKYLSNLKLEAGATPQRHRDLEAIKLQVEDMI 434 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLIIYIENR 681 + YG FN + ++V ++ G+ S+ +F+ + I + Sbjct: 435 TV---------YGDMFNGHTTLKNFENEQIVFFDIDGISKYDKSVFNCQLFTALTLIWSH 485 Query: 682 MYRTPRNLK---------------KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 + R +K + +DE +++ +N ++ + R R+ Sbjct: 486 ALKNGRQMKYLREEKNLSIEDVKYFMVFLDECHNVINSQNEFANRYVLEFEREMRKFFAG 545 Query: 727 YITITQNIVDFDSDKAS----SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 TQ+ + S S +A + + YKI L + + + Sbjct: 546 IFFATQSPQEMLPPPGSTVDVSTMKAIFELTQYKIFLNMDNSVLETLKSVLGESLTESEF 605 Query: 783 DMIGKFGA 790 ++ + Sbjct: 606 RILPELKR 613 >UniRef50_C8VVQ1 Type IV secretory pathway VirB4 protein-like protein n=10 Tax=Clostridiales RepID=C8VVQ1_DESAS Length = 609 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 75/508 (14%), Positives = 181/508 (35%), Gaps = 57/508 (11%) Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 ++ ++ + +T A E ++ + ++ + ++ + I Sbjct: 89 SNAANKNRMQRSSTQDLQQTVTA------ESNLQDVATIVAQMHRSKEPLLHAAVYIELS 142 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 D ++ L + + R + + F++ +P + + Sbjct: 143 AHDPDQLKLLQTELLTELVRSK-LNVDRLLLRQQQGFVSVMPSG------WNVFGDQFER 195 Query: 433 RAESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 + +VANL P P G + +D R + TN N+ + G SG G Sbjct: 196 VLPASSVANLYPFNYSGKTDPNGFCLGRDKFGSNILVDFNRRADDKTNANILILGNSGQG 255 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFN---PFANITD 546 K+ L++ ++ ++ +SG + D ++ L N+GG ++D N P Sbjct: 256 KSFLLKIILCNLRESGMRIICLDPEMEFEDLTNNLGGCFIDLMTGEYIINVLEPKTWDET 315 Query: 547 IDQS----------AERVRDQLSVMASPNGNLDEVHE------GLLLQAVRASW------ 584 D ++ +S + + + ++L + W Sbjct: 316 GDPKDAEAPQAFRQTSKLSQHISFLKDFFRTYKDFDDRQIDTIEIMLCKLYDKWGITDHS 375 Query: 585 ----LAKENRARIDDVVDFL-KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 L ++ + D+ + + + ++ L E+ + L G ++F Sbjct: 376 NFDQLKPDDYPILSDLYELIEEEYKSFDESRRQLYTADTLREICLGLHSLCK-GAESKFF 434 Query: 640 NSDEPSLRDDAKMVVLELGG-LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 N +++ +++ V + G L+ +L A++F+++ Y+ N + T + IDE Sbjct: 435 NG-HTNIK-NSEFVTFGVKGLLQASKNLRNALLFNVLSYMSNELLTT---GNTVASIDEF 489 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 + L N E++ + R+ A I +QN+ DF+ + + + ++ + Sbjct: 490 YLFL--SNLTAVEYVRNFTKRVRKKDSAVILSSQNLEDFNLEGIREYTKPLFSIPAHAFL 547 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIG 786 +A K+ + Q + ++I Sbjct: 548 F--NAGNIDKHFYMDSLQLEESEYNLIR 573 >UniRef50_A0RVD5 ATPase/type IV secretory pathway component n=1 Tax=Cenarchaeum symbiosum RepID=A0RVD5_CENSY Length = 634 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 93/457 (20%), Positives = 162/457 (35%), Gaps = 72/457 (15%) Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 + + ++ + L +D + A + + R + L+S R Sbjct: 199 HVNDLVQKQETVIYECGLTAMVTARDASSLAKKCA-EFERQARWSQIRLLSVRGRQKAT- 256 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT--PAGLLAPTYRNQLAF 467 L G E +A P + + + AG + N+L Sbjct: 257 ---------------LDGWGHRFLYEGSGMAAFYPFESSDMIEADGAGGVYIGS-NELTG 300 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL---------DSGGFAVVFDMGDG 518 + + + +NYNM + G+SGAGK+ + I + A + D+ Sbjct: 301 TPVIYDYLRRSNYNMTILGSSGAGKSVAAKTYIDNFRRMLSEKYGASQPYKAYILDLHGE 360 Query: 519 YKSLCENMGGV---YLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL 575 Y L E + +D L +PF + DQ+ D L+ ++ NL + Sbjct: 361 YAQLAEYLEMNVLNIMDRTELGLDPFHLLDTGDQAV----DMLATVSEMPANLRSL---A 413 Query: 576 LLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTY 635 + +A + + D+V L+N D +AE L ++ A G Sbjct: 414 ISRA--------QGAGSVADLVQILQN--DKTGHAED------CRRAATYLLEF-AEGEL 456 Query: 636 GQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIY-IENRMYRTPRNLKKLN 693 F D P + VV L + S + A++ SLI+ I N + RT R++ KL Sbjct: 457 AGMFRGDLP---LHGRTVV----TLRNADKSKINAMLISLILQRIWNDIRRTERHVPKLL 509 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 VI+E W +L I+ R+ R+ + +TQ D D S A A NS Sbjct: 510 VIEEAWFVLSM--PSTARIIDDIARSGRKENLHCLVMTQ---DIDEMITSPAGAAVIKNS 564 Query: 754 SYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 + ++L+ + K + +RD I Sbjct: 565 ATMMMLRLVKETAVKLQGVL--ALSDKERDEITMLDT 599 >UniRef50_C6BQD5 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BQD5_RALP1 Length = 844 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 109/690 (15%), Positives = 218/690 (31%), Gaps = 96/690 (13%) Query: 175 DILEMENLVKIIRASLQG--ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSD 232 EN + I + +S+ + + + + ++ P+ + P + Sbjct: 176 QFDSHENHFRQILEEFETTVSSLGFKKLHNSELLTFMHRRVSP-PNDHHRVAM---PDTP 231 Query: 233 LNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLN 292 + L+ + +L + + + P + + + Sbjct: 232 VYLNTYLPDSTLRRKKKHLEF-----EGDVVRYVGAMSVKNWPNVIGP--------GVTD 278 Query: 293 PELSISCPFILTLTLVVEDQVKTH---SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWG 349 P L I ++ + + + + +M K + + E + + G Sbjct: 279 PLLQIDGEITVSQCFEIWPKERAQKFIQDTQDHFMASSKPWMSLMIEQMTKTESDKVDAG 338 Query: 350 ELR---------QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN-GFELI 399 +L + L + + Y + I ++ D + + ++ ++ R G +++ Sbjct: 339 KLALAEDAASALEDLTARERQFGHYNMTILSY-GDTEKEMEDTLSEVGSAMRTLVGAKVV 397 Query: 400 SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT------- 452 R + F LP + G N+A+L L A Sbjct: 398 RERMYALSAFTATLPGQWANIVRWGFVNVG--------NLADLAQLRAIRTGDRRNKHLS 449 Query: 453 -------PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD 505 PA L PT N + + + V G S +GKT L+ LI Sbjct: 450 AQLQRPIPALALLPTEHNVPFNYNFHQGDLP----HFFVVGPSRSGKTTLLNFLISQFFK 505 Query: 506 S-GGFAVVFDMGDGYKSLCENMGGVYLD-----GETLRFNPFANITDIDQSAERVRDQLS 559 ++FD G ++D G+ R NP + D+ + +R Sbjct: 506 YHPCNVLIFDKDYSCYVTSGLQGAKHIDMNPSTGKPPRMNPLRVVKDMTKRGWLMRWLQL 565 Query: 560 VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 +++ + E +A+ R+ ++ DF +R Sbjct: 566 IVSLRSYEWKTEDELTFNKALNMLAEQPPEHWRLSELADF---------------VRPLS 610 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 E+ + + +G +F+S E R + +E+GGL + L + I+ Sbjct: 611 SELYKEMLPWLEDGGTYPHFDSVEDDFRL-SDFTDVEMGGLLEDEILAPVFIDYAFFCID 669 Query: 680 NRMYRTPRN--LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 + P L ++E W LL KN K+ E + RT + TQ++ + Sbjct: 670 EMLTLDPTAAIKPTLIYLEEVWYLL--KNKKLRERFDNWLRTLAKKNAIVGMTTQSLAEI 727 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD--QW 795 S N +I L + + LY D+F L + I + AK Q+ Sbjct: 728 AD---SDIFTTIIDNIQNRIFLPNPS--VMAHLDLYRDKF-QLNDEQIERIRTAKRKVQY 781 Query: 796 FSSFLLQVENHSSWHRLFVDPLSRAMYSSD 825 + + E S + P A SD Sbjct: 782 Y---FVNPEGMSRMVNVKFPPEMLACLRSD 808 >UniRef50_B9LVJ9 Conjugation protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVJ9_HALLT Length = 1085 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 111/705 (15%), Positives = 230/705 (32%), Gaps = 113/705 (16%) Query: 197 TQTVDAQAFIDIVG---EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 T D +D + E + + +LD S L+ + S + Sbjct: 349 PTTPDPDDVVDAMDDSGEETGSDDTADVSAADRLDDTSTLHQSVIAPST--------VDW 400 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 N + F + + PE ++ + L + +++ ++ Sbjct: 401 EATHAVINDDTYVRTFWIEQFPEEP---------ADGIFERLLLETDLNTDISIHLDP-- 449 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE-----WGELRQRLGSGQ--SSVVS-- 364 + ++ A W ++ + +L++ + G+ S+V Sbjct: 450 -----------FDSQSAEDMMADWISDLKVNQHDSNSLKAEDLQKDIDRGKFMRSLVRAN 498 Query: 365 --------YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 F+ ++A K +T + I+ N L + T P Sbjct: 499 KASFYRGGVFIRLSAESKQELDTQTTRLRSIVKDAPANC-TLKVANRWQEKGLATVSPLG 557 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQLAFIDIFFRG 474 A + + + V + P ++ + G+ + I+ + Sbjct: 558 ANELGRD------RMSTLTNQAVGAMFPFSSNYMMMDEGVEYGYHGHNGSPVQINPWDLE 611 Query: 475 MNNTNYNMAVCGTSGAGKTG--LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 T ++ V G GAGKT +++ L V+ D G+K + + + + Sbjct: 612 ---TGHSELVVGMPGAGKTFGDIMRHLRMMKRQQDTMLVMIDPVGGFKGIADALNAKTIS 668 Query: 533 -GETLRFNPFAN-------------ITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQ 578 G + NP I+ + + V L + G+L Sbjct: 669 VGGDTQLNPLEIRETPQEVLDADDGISPLSAKKDEVYAVLENFLTARDIDLGTETGVLSY 728 Query: 579 AVRASWL------------AKENRARIDDVVDFLKNA---SDSEQYAESPTIRSRL---- 619 + ++ EN + D+ L + D A S + R R Sbjct: 729 VIDETYRQAGVVEDDVTTHTPENSPTMTDIHRILADIAENPDEHNIAASESARERAAAYA 788 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDRP---SLLVAVMFSLI 675 DE+ + + G+Y E + + D K+V ++LG +E +M L+ Sbjct: 789 DELAIAFQPFREGGSYDNLAERSEVDILEGDNKVVYIDLGQIEGSASGIDRQTFLMQLLL 848 Query: 676 IYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 + + +T RN++ IDE L F++ +F+E +R R + ++Q Sbjct: 849 STVYQQAKKTDRNVE--LAIDEAHYL--FEDQANLDFLETAFRHQRHAGLRMVLLSQTAQ 904 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ- 794 +F + A G K+ K + +++ + QR + A K+ Sbjct: 905 EFYE---TDQAEKILGMCPIKVFHKLPDLDDETADKIGLTRE---QRQYVRGADAGKEDL 958 Query: 795 WFSSFLLQV-ENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 +S L++V E+ + + DP + + + D EF+QQ E Sbjct: 959 GYSQALVRVEEHGTYPLHIVADPFEKRVIDYEPADQEFIQQAISE 1003 >UniRef50_C2HEY2 Conjugal transfer protein n=3 Tax=Enterococcus faecium RepID=C2HEY2_ENTFC Length = 715 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 85/663 (12%), Positives = 202/663 (30%), Gaps = 91/663 (13%) Query: 86 LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL 145 L L + + + ++ L + + + K + Sbjct: 91 FLNSLSSKTKLQLTVYKKKRPLADLQKVLYYQEKGDFLDDYRSEMNEVISRKLDEEKNGY 150 Query: 146 PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 + + +H ++ + + ++ + + + + L + ++ Sbjct: 151 RKCILFTFVQKHTKI---------EHAEKELEMVADRFAMFASRLGS---KIKRIEKTEL 198 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + I+ E++ D K++ D + + ++K +YL + Sbjct: 199 LTILSEIL--GTDDKREKQKVED--------VLPEVIEIKENKNYLKVDTH--------Y 240 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 +L P L L I ++TL + +Q + K Sbjct: 241 AKTIYLQEYPSE--------LADTFLYELLEIPKELVITLHIDPLEQDEAFDLVKTKLAF 292 Query: 326 LEKK----------SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 +E++ + Y + E L L + + + +I F Sbjct: 293 MEQQKVDEQKKALQNGYDYEMLSYDLSYSLTEAKGLVDDLQNRGQKLYAMTSSIH-FRAG 351 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAE 435 E E++ ++ R+ GF++I F LP + + + Sbjct: 352 TTEQLAEIQDEVNAVGRRFGFKIIELEFMQENGLNATLPLG--------INSIPLDRTLS 403 Query: 436 SFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 + + A +P + + G + + N V GT G+GK+ Sbjct: 404 TASTAIFIPFTISDLIQENGKYYGVNAISKNILSL--DRKLLKAPNGFVLGTPGSGKSFS 461 Query: 496 IQPLIRSVLDSGG--FAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQS 550 ++ I +VL ++ D Y + +N G + NP + Sbjct: 462 VKREIVNVLLRDAEDEVIIIDPEREYSVIGQNFNGEIIKISSDSATTINPMDINENYGDD 521 Query: 551 AERVRDQLSVMASPNG-------NLDEVHEGLLLQAVRASW-LAKENRARIDDVVDFLKN 602 + V + + S L + L+ + R ++ + + D + LK Sbjct: 522 TDPVVLKSEFLISLFDLIIGGALGLSSAQKTLIDRVCRRTYEIMSGDMPTFVDFYNILKE 581 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED 662 + ++++ L+ Y G+ + S + ++ ++V+ ++ L Sbjct: 582 QEEE-----------EAKQLVMDLEIYI-EGSLSVF--SAKTNVDITKRLVIYDIKDLG- 626 Query: 663 RPSLLVAVMFSLIIYIENRM-YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 L M ++ + NR+ R ++ IDE L F N + + + AR Sbjct: 627 -KQLKTMGMLIVLDQVWNRITENRERGVRTWLYIDE--MQLLFTNEYSENYFFELWSRAR 683 Query: 722 RHT 724 + Sbjct: 684 KWG 686 >UniRef50_A7B3Y3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7B3Y3_RUMGN Length = 919 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 102/703 (14%), Positives = 226/703 (32%), Gaps = 112/703 (15%) Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIR--------ASLQGASITTQTVDA---QA 204 R+ R + ++ + + + + V+ +R SL A+I + ++ A Sbjct: 112 RNEREYPDIAKGIRQWQESKLADANSTVRTLRYLTITCRADSLAQANIYFRALEPMIEDA 171 Query: 205 FIDIVGEM-----------INH--NPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 F ++ ++ P +P+ + D + ++ DY+ Sbjct: 172 FAGWGSDIAVLGTLDRFRVLHGMLRPGEEFPQVVLRETLQDWKSDILPR--SIQQFNDYI 229 Query: 252 TLGLR----------ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPF 301 LG ++ + P L + A ++N +L Sbjct: 230 ILGDTMVTVLTATQYRKSLDTDTFLHTLSSLPYPSFVTL-DFAPVQQEVINDKL------ 282 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 + + + ++ + + E K + + + +K E E + + + Sbjct: 283 ---VAMHMNNEREINDEIEQK-RQAGQIVTSPSY----TKKKRRDEIEEYIEMVDANDEK 334 Query: 362 VVSYFLNITAFCK--DNNETALEVEQDILNSFRKN--GFELISPRFNHMRNFLTCLPFMA 417 V L + + E E +++ R + G L F ++ T LP Sbjct: 335 GVFLNLLVVLTAPVKEGVELLQERMEEVCAIGRSDKVGAFLEPCDFRQLKALNTALPIG- 393 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNN 477 G + +FN P A + L P G + + + + Sbjct: 394 --GRQVDYMRFFLTSSLVTFN-----PYHAQDILEPGGKMLGINKTTGRY--LIANRKLL 444 Query: 478 TNYNMAVCGTSGAGKTGLIQ--PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET 535 N + + G SG+GK+ LI+ + +++L S +V D + ++ +C GVY D Sbjct: 445 PNPHGIIVGYSGSGKSMLIKLTEISQTLLGSEDDIIVLDPQNEFEDICREYQGVYFDLTP 504 Query: 536 LR---FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRAR 592 N F ++ ++ ++ A E +GL+ ++ + +E+ + Sbjct: 505 KSGIYLNGFEVTQEVFSGSKELK------AEFVAKQCEYAKGLVQAIMKNILVTQEHDSV 558 Query: 593 IDDVVDFL--------------------KNASDSEQYAESPTIRSRLDEMIVLLDQYTAN 632 + + + + + + + + L++YT Sbjct: 559 VSRCTEQMFAQVFAQKRLKKQPTLLWLREEIGKELEQVRHAHDEAIIRPIYNSLEEYTT- 617 Query: 633 GTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM-YRTPRNLKK 691 G+ + ++ ++V + + + AVM +++ Y+ RM Y Sbjct: 618 GSCDML--AHPTNIEFQNRLVGFGMCNVPENN--WEAVMDTVLHYLSTRMDYNKKLQRAT 673 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG 751 V+DE + + E + T R+ G QN+ + A+ + Sbjct: 674 HLVVDEAQVV--SEKPGSAEMLNNAVITFRKFGGIVTLAMQNV---VAALANKKMVELFQ 728 Query: 752 NSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 N SYK L Q + ++ PL G K Sbjct: 729 NCSYKCFLDQGGVDAQSLAEIQ-----PLSEREFRALGTGKPG 766 >UniRef50_Q1ZJS6 Putative uncharacterized protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZJS6_PHOAS Length = 971 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 122/900 (13%), Positives = 277/900 (30%), Gaps = 129/900 (14%) Query: 38 PQFSRLLPYRDYNQESGLFMNDT--TMGFMLEAI--PING-ANESIVEALDHMLRT---- 88 F+ LL +Y +S F + +L P G +++ +VE + ++ Sbjct: 47 YSFADLLSIGEYMPDSKTFELRDLRSHAVVLNITSIPTEGRSDDELVELREAVINAFSNT 106 Query: 89 -KLPRGIPLCIHLMS---------SQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKA 138 LP P + + + IE +R+ +++ + Sbjct: 107 FALPTQTPFIMQTYAYKEDNLTEFFKRTESFIEPDIRDTAYTQKYLSMMKKHMNGISKPG 166 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 + + ++ I +K ++ NL + + + + + Sbjct: 167 GIFYDEMVTKSQYRGQQKKVKIIIYRHISGTEKGIDAAEQINNLTENFISQISSTGVAVE 226 Query: 199 TVDAQAFIDIVGEMINHNP---DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + + F D + N P + + +L Y + Q + S V Sbjct: 227 RDNGEKFQDWLVSWFNPKPPITNGDISQLHELAQYPAEDKQPLNYSISENVVYSQPISDP 286 Query: 256 REN----GRNSTARILNFHLARNPEIAFL-WNMADNYSNLLNPE---LSISCPFILTLTL 307 E I L + P++ + ++ S+ + T+ Sbjct: 287 DEKCWYFDGVPHQYIRVATLQQQPKVGQITGEISKGIGKASQSTALIDSLPDGAMWHQTI 346 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS-SVVSYF 366 ++ D ++ + K + L+ K+ + + + L + G + S Sbjct: 347 ILCD----ENDVDNKVIGLKGVGKSETEESIAAEKA----IQSLVESREVGTKHYLASMG 398 Query: 367 LNI----TAFCKDNNETALEVEQDILNSFRKNGFELI--SPRFNHMRNFLTCLPFMAGKG 420 + + T + T + NG + + +++ LP Sbjct: 399 MFVRADVTVEPSEYMSTLKRNRDKVTQLLLSNGLRPMNIEADAVQVDSYIPHLPMNYALK 458 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTN 479 G+ A ++ NL+P+ T G++ + D+F + ++ Sbjct: 459 DDPYGVYMGLYFDA---DIVNLLPIWGREVGTGNPGMINANRGGEPQTFDMFGKDKVRSS 515 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDMGDGYKSLCENMGGVYLDGETLRF 538 + + + G G+GK+ + + +V+ + + G+ ++ L G Y L Sbjct: 516 HGVLI-GPQGSGKSATLVSIAEAVMAVYRPRLTILEKGNSFRLL-----GDYFKRYGLSV 569 Query: 539 N--------------PF---ANITDIDQSAERV----------------------RDQLS 559 P+ I D + E + R+ L+ Sbjct: 570 QRIALGSRRQRAYFCPYLESHLIFDERYTEEEIEWDEHDEIDEEELEEEDDDSAKREPLT 629 Query: 560 VMASPN------------GNLDEVHEGLLLQAVR---ASWLAKENRARIDDVVDFLKNAS 604 M + L E H+ + +A+ L + + DV L+ Sbjct: 630 EMLTATIIMVSGGNPELAKQLTETHKAMFSEAITLAAERSLQLKQQTITSDVCTALQEVI 689 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG--GLED 662 + + +S +++ + + LD +T G G+ FN + DD + +L++G E Sbjct: 690 ERSEVQDS--VKAEMRNYLKALDGWTK-GDRGRLFNQRGKTFDDDVDVTILDIGQYDAEA 746 Query: 663 RPSLLVAVMFSLIIYIENRMYR-TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 + + L + +L ++ N R + + DE D + ++ + R Sbjct: 747 KAAELSVIYIALSTHLFNIGERYQNSGRDTVYLQDETHVFTDK--PLLAPYMATAVKLMR 804 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + + TQN+ DF + A + I+L S E + Q Sbjct: 805 KIGLKALYATQNVSDFKNG-----AEKILKLVEWWILLNPSEVEVEEAG--VYRTLTNAQ 857 Query: 782 RDMIGKFGAAKDQWFSSFLLQVEN---HSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 + MI K ++ ++ R A ++ + +Q R + Sbjct: 858 KSMILSTTKQKSA-YTEGIVMGNKKVVGEMLTRFVPPSEQLARAMTEPEEKAERKQLRDQ 916 >UniRef50_O25189 VirB4 homolog n=5 Tax=Helicobacter pylori RepID=O25189_HELPY Length = 807 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 102/592 (17%), Positives = 194/592 (32%), Gaps = 75/592 (12%) Query: 179 MENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCV 238 + +++ ++ L + + +DA + ++ E IN P S Y R +N Sbjct: 185 LYSIINNVKNMLS--GLFVEKIDANSLLNFYAEYINGVP-SEYTFARGRLHDGMIN---- 237 Query: 239 EDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 D+ + D+ NG+ R ++ +++ S L+ L +S Sbjct: 238 ---SDVHFKKDF--FTHIHNGKEIFKRFIS---------IKTYDIDKIVSTALSSVLHLS 283 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 F + L + + K K K E EL + + Sbjct: 284 LEFDVILNIDNIPKAKAEKRIETKRKRANKSI--------------RVEIDELNDMIKTD 329 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + LNI K +I N ++ G + F + P Sbjct: 330 RVLMQEISLNILVHAK-TKTDLDSACIEITNLLKQKGIVSTQESIGMLPMFFSFFPNRNR 388 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL----APTYRNQ---LAFIDIF 471 K+L S N+A+L+ L N +RNQ + Sbjct: 389 LNFRKRL--------LSSQNIASLIILEKQNCGFSRNSWGDRHLTIFRNQDKSPYLFNFH 440 Query: 472 FRGMNNTN----YNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENM 526 N + + G +GAGKT LI+ LI + + D +G + + E + Sbjct: 441 AYEAKRKNDMVSGHTIIFGGTGAGKTTLIEFLITNCFKYEDLSILALDRNNGMRVMTEFL 500 Query: 527 GGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA 586 G Y D NPF+ + D + + L+ M + + + + E L A+ + Sbjct: 501 DGQYNDSNDFYINPFS-LKDTSANCTFLVSWLAFMLNIDEDTKDEKEKKTLSALSKTIRV 559 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 N I + D + E + S+ +L++ ++ Y L Sbjct: 560 CYNN--ITKQGGAIFKLRDFKDTLEIDYLDSK-----DILEKESSKDLYKH----STDCL 608 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 K+ V+++ L + L + NR + IDE +++ N Sbjct: 609 DFAKKLSVIDMDALSSSKKDFNLAVLYLFYKVMNRAKLENK--PFYIFIDEAKSVIE--N 664 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 + I+ AR+ G Q+I D + A++ N++ I+ Sbjct: 665 PIMLAKIKDTLAQARKLNGVLTLAFQDINQLDGVEG---AKSIIENAAQVIL 713 >UniRef50_A4VUZ6 Type IV secretory pathway, VirB4 component n=22 Tax=Streptococcus RepID=A4VUZ6_STRSY Length = 783 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 100/693 (14%), Positives = 225/693 (32%), Gaps = 86/693 (12%) Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL 220 F+S+ + + + + + ++ + + + ++++ +M+ Sbjct: 147 FLSFGKSDQTP-KVAFRSLSQIGEYFKSGFSEIDVALGLLGGEERVNVLADML------- 198 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFL 280 + P+S + + + YL+ + + + ++ Sbjct: 199 --RGENHLPFSYKDLTLSGQTTKHFIAPTYLSFKHKNHIELDDRLLQIVYVRDY------ 250 Query: 281 WNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS 340 + + + +++L + +T ++ K +E + K + Sbjct: 251 --GMELGDKFIRDLMQSDLEVMISLHAKGSTKSETMTKLRTKKTLMESQKIGEQQKMART 308 Query: 341 ----------VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 +E E L Q + + I D + + I Sbjct: 309 GIYLEKVGHVLENNINEAEALLQTMTQTGDKLFDTVFLIGVLA-DTEDQLKQSLDIIKQV 367 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 N + + + F + LPF GV + + N+A P + + Sbjct: 368 AGSNDMIIDNLTYMQEAAFNSLLPFGKNY-------LEGVSRSLLTSNIAVNAPWTSVDI 420 Query: 451 LTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI----RSVLDS 506 G NQ++ I + + GTSGAGK + I DS Sbjct: 421 QDKGGKFYGI--NQISSNIISIDRGKLNTPSGLILGTSGAGKGMATKHEIISTKLKEADS 478 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMAS 563 ++ D + Y + + GG +D T N ++D + + V+ + + S Sbjct: 479 DTEIIIVDPENEYSIIGQAFGGESIDIAPDSTTFLNVLD-LSDENMDEDPVKVKSEFLLS 537 Query: 564 PNGNL-----DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 G L D + L+ + R ++ + + + V L + E Sbjct: 538 WIGKLLDRKMDGREKSLIDRVTRLTY-KHFDTPSLVEWVFVLAQQPEQE----------- 585 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 ++ + ++ Y G+ + S +++ D+ ++ + L D L + + I Sbjct: 586 AKDLALDMELYV-EGSLDIF--SHRTNIKTDSHFLIYNVKKLGD--ELKQIALMVIFDQI 640 Query: 679 ENRMYRTPRNLKKL-NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 NR+ + + KK DE LL + +F K + R++ ITQN+ Sbjct: 641 WNRVVKNQKLGKKTWIYFDEMQLLL--LDKYASDFFFKLWSRVRKYGAIPTGITQNVETL 698 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIG-KFGAAKDQWF 796 D + R NS + I+LKQ AK ++ L L +++ K Sbjct: 699 LLD---ANGRRIIANSEFMILLKQ-----AKSDREELVHMLGLSKELEKYLVNPEKGAG- 749 Query: 797 SSFLLQVENHSSWHRLFVDPLSRA--MYSSDGP 827 L++ + + + ++ + S+D Sbjct: 750 ---LIKAGSTVVPFKNKIPQHTKLFDIMSTDPE 779 >UniRef50_C5VLL8 Conjugative transposon protein TraG n=21 Tax=Bacteroidales RepID=C5VLL8_9BACT Length = 961 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 113/312 (36%), Gaps = 16/312 (5%) Query: 549 QSAERVRDQLSVMAS-PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 + R + +MA G+ E + + + + + ++ Sbjct: 630 EKVAANRQLMRIMAEVIEGSYLMRIEQKIEKMEQRRRKMTVRKLSFNTFYEY--ALERIP 687 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL 667 Q I +D +L+Q+ G N+D D + +V E+ ++D P L Sbjct: 688 QLMAEKKIAFNIDNFAAILEQFYRGGELESTLNNDLEQSLFDERFIVFEIDKIKDDPVLF 747 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 V+ ++ +M + +K +I+E W+ + + + E+I+ Y+T R+ G Sbjct: 748 PIVVLIIMDVFLQKMRI--KKGRKALIIEEAWKAI--ASPTMAEYIKYLYKTVRKFHGIA 803 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA-----KEFAKYNQLYPDQFLPLQR 782 +TQ + D A NS KI+L Q+ + A L Q + Sbjct: 804 GVVTQELNDVIDSPI--VKEAIINNSDVKILLDQAKFKDRYDDIAAILGLTAVQRQQIFT 861 Query: 783 DMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLS 841 ++ +F + S + + P Y+++ + E ++ + G + Sbjct: 862 INALNNHEGRN-YFKEVWICRGQVSDVYGVEEPPECYWAYTTERAEKEALKIYTRHFGGN 920 Query: 842 IHEAVWQLAWKK 853 I A+ ++ + Sbjct: 921 IQRAITEIEKDR 932 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 87/585 (14%), Positives = 174/585 (29%), Gaps = 75/585 (12%) Query: 157 HYRVFISYCSPSK-----KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 R F+ K + V + LQ I + + ++ + Sbjct: 114 DIRTFLIITQECAHNAFVKYDAKRWEDFHVKVAKVADILQEKGIAHRKLSKPEIVEYLHR 173 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + P+S N++C +++ + R + + N + F Sbjct: 174 FMAFQFKQG--------PFSMTNFKCSDENLKIGDRTVKSFPLVDIDEINMPNFVRPF-- 223 Query: 272 ARNPEIAFLWNMADNYS-NLLNPELSISCP--FILTLTLVVEDQVKTHSEANLKYMDLEK 328 + + +L + I I + + Q K + K Sbjct: 224 ------LSVNINGTYIATDLFSFLTEIPYTDCVIYNQVIQIPAQRKLMRKLQGKAKR--- 274 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 S PS ++ L L +V NI C + T + I Sbjct: 275 --HGSMPD--PSNRIAKEDIERLLDTLAVDSKLMVYTNFNILVSCPHDKITPV--TSYIE 328 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD 448 +N + F P + A + + Sbjct: 329 TKLYDCAIMPSRSAYNQLELFTCSFPGNGYAFNPDYDLFLTLSDAALCLCFKEHLKHSEE 388 Query: 449 NPLTPAGLLAPTYRNQLAFIDIFFRGMNNT---NYNMAVCGTSGAGKTGLIQPLIRSVLD 505 PL + IDI + + N N G SG+GK+ + ++R +L+ Sbjct: 389 TPLKTY---YTDRQGLPVAIDITGKEGAHKYTDNANFFCIGPSGSGKSFHMNSVVRQLLE 445 Query: 506 SGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANI-----TDIDQSAERVRDQ 557 V+ D GD Y+ +C GG Y+ + NPF + + ++ Sbjct: 446 QNTDVVMVDTGDSYEGICSYFGGTYITYSKEHPISMNPFKITKTEYRQNFGEKKNFLKSL 505 Query: 558 LSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARI------DDVVDFL----KNASDSE 607 + ++ + ++ + ++ Q + + A + R D + L K + E Sbjct: 506 IFLIFKGSEMPSKIEDAIINQVIVEYYDAYFHPFRGFSSEEKDRLRHRLLLEDKKNGEYE 565 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQ--YFNSDEPSLRDDAKMVVLELGGLEDRP- 664 +Y E R D D T + G+ F+ E + AK V +L L + Sbjct: 566 KYGEKVEHRYYQDFEEHQSDISTKDYAEGKDDIFSEAEVRHQVKAKRQVEKLHALVNDKA 625 Query: 665 -----------SLLVAVMFSL----IIYIENRMYRTPRNLKKLNV 694 L+ + + ++ IE ++ + + +K+ V Sbjct: 626 ATEGEKVAANRQLMRIMAEVIEGSYLMRIEQKIEKMEQRRRKMTV 670 >UniRef50_A5UVD8 Type IV secretory pathway VirB4 components-like protein n=2 Tax=Roseiflexus RepID=A5UVD8_ROSS1 Length = 618 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 92/536 (17%), Positives = 167/536 (31%), Gaps = 67/536 (12%) Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT--LVVEDQVKTHSEAN 320 + + + P L + +PEL + P + + D + A Sbjct: 53 DSFMTTLEVRAFPPTLSLAWLD-------DPELGLDTPGTTVHQRLVPIPDALARRVLAR 105 Query: 321 LKYMDLEKKSKTSYA--KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 + L + + A + ++ + LR L +G + + IT E Sbjct: 106 SEDAALGTLAGDAQAGTHFDMEAQQGVEATAALRHDLTAGTDRLFQVAVTITLAAA-TPE 164 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + + + G L +F +L LP + G++ Sbjct: 165 ELAARVDRVRLAAAQQGILLGVVQFQQWEGYLGALPLG--------YDQPGLLHDTSGRA 216 Query: 439 VANLMPLVADNPLTPAGLLAP----TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTG 494 A +P A GL D + TN +M + SG+GKT Sbjct: 217 AAMGLPTAAPGLTRRGGLPIVWGEHPRSGAPIVYDRWQA----TNPHMLIVAESGSGKTY 272 Query: 495 LIQPLIRSVLDSGGFA-VVFDMGD-GYKSLCENMGGVYLDGE---TLRFNPFANITDIDQ 549 + L+ L G A ++ D Y+SL +GG Y+ NP + Sbjct: 273 TMGGLLAQELALGEDALLILDPKRQEYRSLTTALGGAYISLSGRAGYHINPLELPPLAPE 332 Query: 550 SAERVRDQLSVMASPNGNLDEVHEGLLLQAVRA-------------------SWLAKENR 590 A V + G V + L+ + ++A ++ A+ Sbjct: 333 RARAVAALEEDLL---GQRISVVKALITRELKAQGAAIDAVGAAAIQDAIAAAYAARGIS 389 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 + + SD +QY + E+ L +T GT G FN D+ Sbjct: 390 SDPRTFTQPMPTFSDVQQY-----LAEIAPELARALTLFTR-GTIGDLFNHPSNVPTDNP 443 Query: 651 KMVVLELGGLEDRPSLLVAVMFSL-IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKV 709 + + L+ L ++ + + + P + V+DE LL + Sbjct: 444 LLALDLWSLLQSNDETLARLLPVIVMDFFVTTAINRPTGRRSHLVLDEAHALLH--SEVG 501 Query: 710 GEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 ++ +R R ITQ++ D D S R N+ K+IL + Sbjct: 502 ARTLQMIFRIGRSLQFKATVITQSLDDLDE---SDQTRVLLENARTKLILGLNRDS 554 >UniRef50_D0Z5G8 Conjugative transfer protein TrbE n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z5G8_LISDA Length = 800 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 97/568 (17%), Positives = 189/568 (33%), Gaps = 73/568 (12%) Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF----PSVEKEAKE---- 347 +S P+ + + D + + E+K + K P +++ A Sbjct: 265 DLSIPYRWSTRFIFFDDFEAQKLLKTERKKWEQKVISFKDKLLNVADPKIDQAAASMVAQ 324 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 + + G+S+ Y I D +E + E +G N Sbjct: 325 YQLAETAINKGESAYGQYSSTIILRHTDIDELNEQTEYVDKCIRYISGMHCRVETVNATD 384 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT-----------PAGL 456 F+ LP + + K L N+ +LMPL L Sbjct: 385 AFIGTLPSDSVANIRKPL--------LSVDNLVHLMPLNFIWTGNEFCPCPFYPSKSPPL 436 Query: 457 LAPTYRNQLAF-IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV-LDSGGFAVVFD 514 L + + F +++ + +T + G +GAGK+ L+ L + FD Sbjct: 437 LVASAQGSSVFRLNLHVDDLGHT----LIFGPTGAGKSTLLATLAAQMNRYENAAIYAFD 492 Query: 515 MGDGYKSLCENMGGVYLD-GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNL-DEVH 572 +G +L + GG + D G FA ++++D + + + G + H Sbjct: 493 VGMSMYALSQ-CGGRHYDIGNDTS--QFAPLSNLDTDFSWCNNFIEQLLVLQGLVIKPTH 549 Query: 573 EGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTAN 632 + A+ A N + + +N +++ ++ YT N Sbjct: 550 RTAIYNALMAM--KGSNIKTLSEFRTQCQN-----------------EDVKSHIEYYTIN 590 Query: 633 GTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKL 692 G G + + + + V E+ L DR A ++ YI ++ + Sbjct: 591 GNGGDLLDGESDEFSLSS-LSVFEIKSLMDRGDTDCA---PVLSYIFRQIELRLKGEPAF 646 Query: 693 NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGN 752 +IDEGW + KN K ++ T R+ I TQ + + S + Sbjct: 647 ILIDEGW--ISLKNEKFKNMLKDWLLTLRKLNCVVIFSTQLLS---AAIESGILDVLMES 701 Query: 753 SSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRL 812 KI L +++ + Q +I + G K ++ + + S L Sbjct: 702 CPTKIFLP-NSEALNIKHTYKTFGLSNAQIKLIKE-GTKKRDYY----VVQGSSSRLIDL 755 Query: 813 FVDPLSR-AMYSSDGPDFEFVQQKRKEG 839 +D ++ + SSD +++ KE Sbjct: 756 SLDDIAISVVGSSDKKSLLRIKELVKEH 783 >UniRef50_A9IYE3 Vbh4 protein 2 n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IYE3_BART1 Length = 611 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 72/435 (16%), Positives = 139/435 (31%), Gaps = 60/435 (13%) Query: 245 KVRADYLTLGLR--ENGRNSTARILN-FHLARNPEIAFLWNMADNYSNLLNPELSISCPF 301 V +D + G E + R F P + + + L++ F Sbjct: 215 TVYSDRIIFGKEIIEIRTEAGRRFAGMFGWKEYPAKTRV--------GMADGLLTLPFEF 266 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 I T + V + + K + + + E + L S + Sbjct: 267 IFTQSFVFKSKNVAKQIMGRKQNQMVNAGDRA--------GSQIMELDDALDDLESNRFV 318 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + + L++ F D + + + G + + LP G Sbjct: 319 LGEHHLSLAVFA-DAPQELADNLAKARSQLTNGGAVIAREDLGLAATWWAQLP-----GN 372 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRG 474 + +G + S N A L P + N PA L T + + F Sbjct: 373 YAYRTRSGAI---TSRNYAALSPFHSFPVGKIDGNVWGPAVALMKTSAGSPFYFNFHFGD 429 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--- 531 + N VCG SG+GKT ++ L+ + V FD G + GG Y+ Sbjct: 430 LG----NTFVCGPSGSGKTVIVNFLLAQLQKHDPNMVFFDKDRGAELFVRAGGGTYMPLK 485 Query: 532 DGETLRFNPFANITDIDQSAERV---RDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 +G+ P + D + A+RV + + +++S + + E + AV L + Sbjct: 486 NGKPTGIAPLKGL-DYNNPADRVFLRQWIIKLVSSEDQKISEAERQDITAAVDQLALLPK 544 Query: 589 NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD 648 + I + F + + L+++ G F++ + + Sbjct: 545 EQRTISALQMFFDTTHR--------------EGIAGRLERWCKGNALGWVFDNPDDDIGI 590 Query: 649 DAKMVVLELGGLEDR 663 DAK + ++ D Sbjct: 591 DAKFIGYDMTDFLDN 605 >UniRef50_B9D147 VirB4 n=1 Tax=Campylobacter rectus RM3267 RepID=B9D147_WOLRE Length = 834 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 92/612 (15%), Positives = 201/612 (32%), Gaps = 77/612 (12%) Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINH-NPDSLYPK 223 S K + I + + I+ + + I+ N + Y Sbjct: 200 ESNESAKLKQKIELLNDTFSNIKNYFSIYQ--PRQLSGDEIINFYATYSNAKETNLAYTN 257 Query: 224 RRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNM 283 D Y S ++ + DY+ R +G AR ++ +I + Sbjct: 258 ELITDSY---------ISSYVEFKKDYIEF-YRNDGTTKYARFISVKAYETEQIKSI--- 304 Query: 284 ADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 SNL+ + ++ +A K ++K T +VE Sbjct: 305 --ITSNLIKSNNEF-------MAMIYL-------KAYEKRKAIKKIKDTKAF----AVEL 344 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF 403 +E +L + + + + ++V ++ D+ + ++ N G ++ Sbjct: 345 VRQELDQLMELIQADRENLVETSFSVYCLA-DSLKELENRSNELKNILENQGLNVVRETL 403 Query: 404 NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR- 462 N + + P K+ + +F + N G T++ Sbjct: 404 NQKALYFSFFPSRGNLNARKKTLNISNLATIANFEN----EVTGFNQNDWGGEAITTFKH 459 Query: 463 --NQLAFIDI-FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 + + + + + G +G+GKT L Q L+ ++ D G Sbjct: 460 LNGTPFLFNFHWQPDGDRPAGHTMIVGGTGSGKTTLAQFLMTNLFKYPIDIFAMDKLRGM 519 Query: 520 KSLCENMGGVYLDGETLRF--NPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL-- 575 + + G Y D E+ F NPF+ + D +++ + ++ L MA ++ HE + Sbjct: 520 YNFTNYVDGEYHDSESDGFKLNPFS-LADTNENRDFLKSWLRFMAEVK---NDEHEAIND 575 Query: 576 LLQAVRASWLAK--ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 + + + K + D + L P+ + + + D Y Sbjct: 576 INNTIDRIYDMKQDGQTLTLSDFIISL------------PSDNNEKSRLKIRFDNYK--- 620 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 G F++ E +L ++ VL + G+ + ++N+ + Sbjct: 621 --GSIFDNKEDALNFTKQLSVLNMDGILQNKKTAGLTAIYIFHKLKNKAKNSADKRGFFC 678 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 IDE L ++ + E I + R+ G Q++ F++ + S + N Sbjct: 679 FIDELKDYL--QDETMQEKILEAILEWRKIGGVACMGFQSMSLFNNIERGS---SFLDNM 733 Query: 754 SYKIILKQSAKE 765 + II +++E Sbjct: 734 ANFIIFPTNSEE 745 >UniRef50_B0ZDY6 Pilx3-4 protein n=16 Tax=Enterobacteriaceae RepID=B0ZDY6_ECOLX Length = 917 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 95/593 (16%), Positives = 187/593 (31%), Gaps = 72/593 (12%) Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 + +L+ + + +++T + D+ + + LE + + + Sbjct: 349 AGILDALMYLPVEYVVTSSFTAMDKQSAIKALDDQIDKLEMTDD--------AAKSLLAD 400 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 + SG S + F D+ E ++ + ++ G + + Sbjct: 401 LKVGLDMVSSGYISFGKSHQTLVVFA-DSPERLVKDTNIVTSTLEDLGLIVTYSTLSLGA 459 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAF 467 + LP L +L + AE + N G T R Sbjct: 460 AYFAQLPGN--YTLRPRLSTLSSLNFAEMESFHNFF--SGKEKGNTWGEKLITLRGSGND 515 Query: 468 IDIFFRGMNNTNYNMA----------VCGTSGAGKTGLIQPLIRSVLDSGG--------- 508 I M + N + GTS GKT L+ + G Sbjct: 516 IYHLNYHMTTEHQNFFGKNPTLGHTEILGTSNVGKTVLLMTKAFAAQQFGTPESFPANRK 575 Query: 509 ----FAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVM 561 V FD + MGG Y +GE +NP A + ++ ++D + ++ Sbjct: 576 LKKLTTVFFDKDRAGEVGIRAMGGSYYRVKEGEPTGWNP-AALPPTKRNIAFMKDLVRLL 634 Query: 562 ASPN-GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 + N LD+ L+ AV + I + ++ D+E Sbjct: 635 CTLNSEPLDDYQNSLISDAVERLMQRSDRSYPISKLRPLIQEPDDTETKRHG-------- 686 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 + L +T +G F++ E + D + ++ D L A F LI + Sbjct: 687 -LKARLKPWTQGEEFGWVFDNREDTFDVDNLDVFGIDGTEFLDNKVLASAASFYLIYRVT 745 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 + L +DE W+ ++ N +F+ +T R+ + TQ+ + Sbjct: 746 ----MLADGRRLLIYMDEFWQWIN--NEAFRDFVYNKLKTGRKLDMVLVVATQSPDELIK 799 Query: 740 DKASSAARAAWGNSSYKIILKQSAKEFA------KYNQLYPDQFLPLQRDMIGKFGAAKD 793 S A A + I L + + + +LY D+ + Sbjct: 800 ---SPIAAAVREQCATHIYLANPKAKRSEYVDGLQVRELYFDKIKAIDPLSRQFLVVKNP 856 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKEGLSIHE 844 Q ++ +++ RL + + + S+ P E + KEG+ E Sbjct: 857 QRKGE----SDDFAAFARLELGKAAYYLPVLSASKPQLELFDEIWKEGMKPEE 905 >UniRef50_B2TH83 CagE TrbE VirB component of type IV transporter system n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH83_BURPP Length = 849 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 124/818 (15%), Positives = 251/818 (30%), Gaps = 140/818 (17%) Query: 63 GFM---LEAIPINGANESIVEALDHMLRTKL-PRGIPLCIHLMSSQLVGDRIEYGLREFS 118 GF AI GAN + V H++R+KL + SQL GD+I + + + Sbjct: 57 GFTRSWFAAINTLGANNNRVALWSHVVRSKLRYDLSGIKYDNYFSQLFGDQIAERVGKKT 116 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILE 178 + + + + R +A L + + + + R Sbjct: 117 FFQNEL-FLSPVYRPAPGRAERIGAALDKQGGSDV----------LAAARDEIDRITNQL 165 Query: 179 MENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCV 238 + +L + + L + G ++N + P +Y Sbjct: 166 VRSLRRYNPSVLGVEEFDGEKPAISHLQAFYGRLLN----------ADVGPVPLDSYSV- 214 Query: 239 EDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 ++ + L G + + + N+ + L + Sbjct: 215 ----RFAIQRNELHFGREIIEIEGPVSSRYAGVVGL---KAPYGAENAKVNIFHGLLRLP 267 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 F+L+ +L K + S + KE + R+RL +G Sbjct: 268 YEFVLSQSLTFLPLNKADKFLQTQISQFSSTDANSL---------QLKELKDARERLQAG 318 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP-RFNHMRNFLTCLPFMA 417 + + + +T + D+ E E +++ F + LI R + + LP Sbjct: 319 KFGMCEHEFILTIY-GDSIEEVNEGINEVIAVFEEKNLTLIRKKRGKLITQYFGMLPGNF 377 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLV--------ADNPLTPAGLLAPTYRNQLAFID 469 G + + N A PL +P L+ T F++ Sbjct: 378 LTGRLDAM-------PVSTDNFAAFFPLHNFFTGNAEGSQWGSPIALMESTSNG-PIFMN 429 Query: 470 IFFRGMNNTN--------------------------------------YNMAVCGTSGAG 491 N N V G SG+G Sbjct: 430 YHVSRRRLRNQEVRLEYTPEENEEDEEDEQAEQEGIITPKRKAHKKELGNYQVIGPSGSG 489 Query: 492 KTGLIQPLIRSVL--------DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNP 540 KT L + ++R+++ +D G + L +GGVY DG+ NP Sbjct: 490 KT-LTKLMLRTLMRKVRPGKGMKPFKTFAWDKDYGEEILVNALGGVYFRLEDGKPTGLNP 548 Query: 541 FANITDIDQSAERVRDQLSVMASPNGNL--DEVHEGLLLQAVRASWLAKENRARIDDVVD 598 +A + + + + + + + A + + +L ++ + E+ R ++D Sbjct: 549 YA-LQNNEVNCQFIHELFMWCACKDPAYLRTGDDDKILSDVIQDVYKLPEHLRRPARMMD 607 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD--AKMVVLE 656 L +S + Q +R+ + L ++ G Y ++ + Sbjct: 608 TLPGSSSAVQGPGG----ARIVSLKAALVRWVEGGQYSWVLDNSRDLFDLTRANDF-GFD 662 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + + + I +++ + + I E W+ L K+ + EFI Sbjct: 663 MTKFLNNDFARTPIQLL----INHKIDLSVDGNPFVLDIAEAWKAL--KDPFMQEFIGDK 716 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL---KQSAKEFAKYNQLY 773 +T R+ G TQ+ D S +IIL + +++ + L Sbjct: 717 AKTVRKLQGIIGLDTQDPTDL---STSPIRGTLLQQFPTQIILPNDRAKREDYVEGLGLT 773 Query: 774 PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHR 811 ++ ++ M+ + G FL + N S R Sbjct: 774 DREYSLVREGMLDEPGK--------FLFKQGNDSVVVR 803 >UniRef50_Q9ZLT4 CAG pathogenicity island protein 23 n=101 Tax=Helicobacter pylori RepID=CAGE_HELPJ Length = 983 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 91/610 (14%), Positives = 198/610 (32%), Gaps = 83/610 (13%) Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 S+L + ++ FI ++ + + + +++ Sbjct: 408 SDLFDKINALDSEFIFMHAYSPKNSQVLKDKLAFTSRRIIISGGS---------KEQGMT 458 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 G L + +G+G ++ SY ++ F D+ E + ++ ++S GF + F+ Sbjct: 459 LGCLSELVGNGDITLGSYGNSLVLFA-DSFEKMKQSVKECVSSLNAKGFLANAATFSMEN 517 Query: 408 NFLT------CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA--------DNPLTP 453 F LPF+ S N A+ + + A +N Sbjct: 518 YFFAKHCSFITLPFIFD---------------VTSNNFADFIAMRAMSFDGKEDNNAWGN 562 Query: 454 AGLLAPTYRNQLAFIDIFFRGM--NNTNYNMAVCGTSGAGKTGLI----QPLIRSVLDSG 507 + + + N +++ + + + + G++G+GKT + + + + Sbjct: 563 SVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSGKTVFMSMTLNAMGQFAYNFP 622 Query: 508 GFA---------VVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN---ITDIDQSAE 552 V D G MGG Y+ G NPFA + + + E Sbjct: 623 ANISKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTDTGLNPFAWAACVQKTNATME 682 Query: 553 RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL-----KNASDSE 607 + + +SV+ NL + S+ ++ V + + + ++ Sbjct: 683 QKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTLAAAVTNLITGDMNLDYPITQ 742 Query: 608 QYAESPTIRSRLDEMIVLLDQYTA--NGTYGQYFNSDEPS-LRDDAKMVVLELGGLEDRP 664 + + ++ L + NG + F++ L ++ ++ D Sbjct: 743 LINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSSFLDNN 802 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 + + F L I+ M + + IDE W+ L + KV F+ +TAR+ Sbjct: 803 DVSPFICFYLFARIQEAM----DGRRFVLDIDEAWKYLG--DPKVAYFVRDMLKTARKRN 856 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 TQ+I D A A KI L+ + Y +L + Sbjct: 857 AIVRLATQSITDLL---ACPIADTIREQCPTKIFLRNDGGNLSDYQRLANVTEKEFE--- 910 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEG--LSI 842 I G + + S R + S+D + + + + + Sbjct: 911 IITKGLDRKILYKQDGSPSVIASFNLRGIPKEY-LKILSTDTVFVKEIDKIIQNHSIIDK 969 Query: 843 HEAVWQLAWK 852 ++A+ Q+ + Sbjct: 970 YQALRQMYQQ 979 >UniRef50_D1QR49 Plasmid transfer protein n=1 Tax=Prevotella oris F0302 RepID=D1QR49_9BACT Length = 972 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 119/329 (36%), Gaps = 32/329 (9%) Query: 550 SAERVRDQLSVMASPNGNLDEVHEGLLL---QAVRASWLAKENRARIDDVVDFLKNA--- 603 ++R+ ++ MA+ G + + L+ + + +L + + +ID + K Sbjct: 626 QVSKLRNVINDMAASEGEKENANRQLVRLMPELIEGKYLMRIEK-KIDKIEKQRKKLNVK 684 Query: 604 ------------SDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 Q I +D +L+Q+ G N+D D K Sbjct: 685 NLSFNSYYEFALERIPQIMTEKKIDFDIDNFAAILEQFYKGGELEHTLNNDLDKSLFDEK 744 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 +V E+ ++D P L V+ ++ +M + +K +I+E W+ + + + Sbjct: 745 FIVFEIDKIKDDPILFPIVVLIIMDVFLQKMRL--KKGRKALIIEEAWKAI--SSPTMAG 800 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK-----EF 766 +I+ Y+T R+ G +TQ + D A NS KI+L QS + Sbjct: 801 YIKYLYKTVRKFNGIAGVVTQELNDVIDSPI--VKEAIINNSDVKILLDQSKFKDRYGDI 858 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 + L Q + + + + +S + + V P ++++ Sbjct: 859 SAILGLTDVQRQQIFT-VNALPPKEGIPYHKEVWISRGQYSDVYSVEVPPEWYWAFTTER 917 Query: 827 PDFEFVQQKRKE-GLSIHEAVWQLAWKKS 854 + E ++ + I +A+ + + Sbjct: 918 VEKEALKIYERAFDDDIEQAITHIEEDRK 946 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 110/363 (30%), Gaps = 29/363 (7%) Query: 243 DLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFL-----WNMADNYSNLLNPELSI 297 ++ V +Y+ G R S I L +N+A + + L Sbjct: 189 NMNVTDEYIKTGERAIKSFSLVNIDTIDLPTFIRPFNTMAVNGFNIATDLLSFLADIPYT 248 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 C I + + Q + K + PS + + + L Sbjct: 249 DC-VIYNQVIQIPQQRPLMRKLQGKAKRHDSMPD-------PSNKIAKADIDLVLDLLAK 300 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 +V NI V + G +N + F+ P ++ Sbjct: 301 ESQLLVYTNFNIITSSP--LAKVNSVTSYLETKLYDCGIIPSKACYNQLELFINSFPGLS 358 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMN- 476 + + A M ++ L + + IDI + Sbjct: 359 YSFNKEYDLFLTLADAALCLMYKEHMKHSEESRL---NVYYTDRQGIPVSIDITGKEGKI 415 Query: 477 --NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE 534 N N G SG+GK+ + ++ +L V+ D GD Y+ + G Y+ Sbjct: 416 KFTDNANFFCLGPSGSGKSFHMNSVVAQLLMQDTDVVMIDTGDSYEGISHYFHGTYIAYS 475 Query: 535 ---TLRFNPFANITDI-----DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA 586 + NPF+ +D + + ++ + ++ N + ++ + ++ Q + + Sbjct: 476 KEKPISMNPFSITSDEYHLNFGEKKQFLKSLIFLIFKGNEDPTKIEDKIINQTLVEYYDE 535 Query: 587 KEN 589 N Sbjct: 536 YFN 538 >UniRef50_B4YK33 TagB4 n=4 Tax=Betaproteobacteria RepID=B4YK33_9BURK Length = 804 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 91/525 (17%), Positives = 169/525 (32%), Gaps = 52/525 (9%) Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 I + + R L + + +L L + C F LT + V D + Sbjct: 215 CEIRSQNGTRFATSFDLKDFGVSKVKVLTGVLDLPCEFTLTQSFVYVDSTAMQEIIKKQL 274 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV 383 +L+ + + E + L SG+ + + ++ D + A + Sbjct: 275 NNLKSVGDQAL--------DQQDELKAGQGGLASGE-LMFGEYHSVLVVYGDTAKQASQN 325 Query: 384 EQDILNSFRKNG-FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + F+ +G + + + + + +P K + V A SF + N Sbjct: 326 GARVYTRFQNSGGYRFVKAGLSAPATYFSQVPGSKHKP---RCFPKSTVNLATSFGMHNY 382 Query: 443 MPLVADNPLTPAG-----LLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAG 491 + P G + T N + + F N + + G +G G Sbjct: 383 S--HGKSQGNPIGDGSAVMPLQTISNTIYDFNFHFSNPKEDNIGDQIAGHTLILGATGTG 440 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDID 548 KT L L+ + V D+ +G K + GG Y DG+ NPF + D Sbjct: 441 KTTLETALLAFTDRFNPYLFVLDLDEGMKIFIKATGGTYYAPKDGQPSGCNPFQ-LPDSP 499 Query: 549 QSAERVRDQLSVM-ASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 ++ E + + + + G + E + AV ID N + S Sbjct: 500 KTREFIYRIVGICGKNAEGRVTAAEEKQIQLAVDTLMN------TID-----FGNRNFSV 548 Query: 608 QYAESPTIRSRLDEMIVLLDQYTA--NGTYGQYFNSDEPSLRDDAKM-VVLELGGLEDRP 664 P D + L ++ G Y ++ D + +L + Sbjct: 549 LLQSIPHDPGNADSLRTRLSRWCRSEGGRYAWCLDNTSNDFDPDDFYRIGFDLTDILKDD 608 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLN--VIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 L M + + ++ + M + VI E W F+ + EF+ K +T R+ Sbjct: 609 YLPTEPMLAYLFHLRSLMMERVAESGGILGTVITEFWYPARFEITQ--EFMLKILKTDRK 666 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA 767 G I +Q+ D + S + KI L E+ Sbjct: 667 LGGWVILDSQSPEDAIN---SPIFATLVQQTPTKIFLPNPDAEYK 708 >UniRef50_B9NX71 Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NX71_9RHOB Length = 801 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 82/479 (17%), Positives = 154/479 (32%), Gaps = 74/479 (15%) Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD--NNETALEVEQDILNSFRKNGFELI 399 E+ A E+ + G++ V Y +T E ++I GF++ Sbjct: 310 EEMALGAEEMATDVNRGEA-VGMYLSTLTLIGGRYTTPEELQAAAEEIEAVLVNAGFKVR 368 Query: 400 SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN--------PL 451 R + +L LP A + L + L+PL PL Sbjct: 369 YEREAALELYLASLPGHAHRVLRD--------TMMPVSDFVELIPLRTSWKGEVHNPSPL 420 Query: 452 TPAGLLAPT----YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL-IRSVLDS 506 P+ A T +L ++ + +T + G +G GK+ L+ L + Sbjct: 421 FPSNSPALTWARSMTGELFHFNLHVDDVGHT----FMFGPTGGGKSVLLGLLSAHWLKYP 476 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGETL---RFNPFANITDIDQSAERVRDQLSVMAS 563 + FD G + L G + P ++ ++ E D + MA Sbjct: 477 DARVIYFDKGYSSRHLVNVFEGSFTSFGGETGRGVAPLMHLREL--GLEWGVDWVGEMAK 534 Query: 564 PNG-----NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 +G L + L A++ +L + ++ +L+N Sbjct: 535 LSGVSLTPALRDEIRAGLSNALKTGFL------TLSELQTYLQNP--------------- 573 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL-EDRPSLLVAVMFSLIIY 677 E+ + +++ NG G + D ++ + V E+ L + + + + + Sbjct: 574 --ELQSAIRRFSRNGGSGLLDDDDVSLDWEN--LTVFEVDELFQQNEDMALLALDYIFAQ 629 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 +E R L V+DE L I + + ARR + TQ++ D Sbjct: 630 VERRF----DGKPTLLVLDEAHAFLGHS--IFASRIRRWLKEARRSNVTVLMATQSLSDL 683 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDMIGKFGAAKDQW 795 S A + +I L K + Y Q D+I +D + Sbjct: 684 TM---SDLADVLLESCQTQIFLPNPKARTEKVRKQYLTLGMTKAQIDLIASLTPKRDYY 739 >UniRef50_Q5ZW33 LvhB4 n=5 Tax=Legionella pneumophila RepID=Q5ZW33_LEGPH Length = 826 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 89/607 (14%), Positives = 191/607 (31%), Gaps = 72/607 (11%) Query: 200 VDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENG 259 V+A I + + + P+ + + + S + + + Sbjct: 203 VNAGQTISFKHPVYSPPIANSIPQSFRQEAKYPEGHLGQYLSSCQLLFGECIQFQGNTQK 262 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT--LTLVVEDQ-VKTH 316 + L + P + S LL+ LS+ C FI T + D + Sbjct: 263 DCVFGAM--LSLKKYPT--------NTASILLDSMLSLDCEFIATHTFAPIGRDSALNMI 312 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 S+ K + E K+ + + +L + S + ++ + + Sbjct: 313 SKKRSKLLSAEDKALS-----------QTTALSDLEDGIASETLLLGAHHHTVMLLAPNK 361 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAES 436 + + +G ++ F + LP S Sbjct: 362 PL-LDTAILEATKRYGASGIVVVKETLGQEPAFWSQLPCNQH--------FITRASLITS 412 Query: 437 FNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN---YNMAVCG 486 N + PL +N L A L T + + RG + TN + A+ G Sbjct: 413 QNFVDFCPLHNTQTGFSNENFLGGAVTLLETPSKTPVYFNYHARG-SKTNPSKGHAAIFG 471 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG-VYL---DGETLRFNPFA 542 + AGKT L+ L + GG + D + K G Y+ + NP Sbjct: 472 GNNAGKTTLVNFLDAQMGRFGGRSFFIDRDESSKIYVLASGNSSYIKIEPSNPIAMNPLQ 531 Query: 543 NITDIDQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLA-KENRARIDDVVDF 599 + D ++ ++ L+ + + ++ + S+ + + F Sbjct: 532 -LPDTSENRSFLKLWLATLVQEESECVIPSQIAEIINDCIDYSFEQLAPEFRTLSHLSQF 590 Query: 600 LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 L + P ++ L + + +G + F++ +L D V ++ Sbjct: 591 LP-----VDFPRWPHLKRWLKQNDSRI-----DGEFHWLFDNPNDALNLDFDKVGFDVTY 640 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 + D + + + +Y+ +RM + +I E W+L F + + + + T Sbjct: 641 MMD--QVHSVIATPVYLYLLHRMRQCLDGRLTSFIIAEAWQL--FASPFWEKALREWLPT 696 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ---SAKEFAKYNQLYPDQ 776 R+ G +I TQ+ S N + I + + ++ +L Q Sbjct: 697 IRKKNGHFIFDTQSPKTITD---SPIKHIVLDNLATLIAFPNPLADKETYMEHLKLTEAQ 753 Query: 777 FLPLQRD 783 F ++ + Sbjct: 754 FEAIKEN 760 >UniRef50_B6FMB2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMB2_9CLOT Length = 506 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 74/405 (18%), Positives = 139/405 (34%), Gaps = 53/405 (13%) Query: 432 QRAESFNVANLMPLVADNPLTPAGL-LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 Q + VA P P GL L T DIF + YN + G + Sbjct: 68 QELTASAVAGGNPFHFSCLEDPYGLYLGQTPCGGSVLFDIFAKSDTRLYYNSLIIGVMRS 127 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPFANITDID 548 GK+ L++ G F FD+ + L +GG + DG NPF + + Sbjct: 128 GKSTLLKKQFLQRAILGDFVRAFDITGEFTELTNTLGGKIIACDGTNGIQNPFEILKSSE 187 Query: 549 QSAERVRDQLSVMASPNGNLDEV----HEGLLLQAVRASW---------------LAKEN 589 +S +++ L + + + L+ E Sbjct: 188 SDNGSFARHISKLSTWYKFLVPEASVDQVTIFKNLLYGLYKKFNLLPDGEQKITELSAEY 247 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRS--------RLDEMIVLLDQYTANGTYGQYFNS 641 ++D +L+ D + I +L +M + ++ YG FN Sbjct: 248 YPIMEDFYIYLQEQMDVIKNTTYDEIERQVKAHELLQLQQMERIFQDLISS--YGHIFNG 305 Query: 642 DEPSLRD-DAKMVVLELGGLED-RPSLLVAVMFSLIIYIEN-------RMYRTPRNLK-- 690 D +++ ++ L++ + A +F+++ + M + + K Sbjct: 306 YTSFSNLKDVQIITYDMSKLKEMDDRVFDAQLFNILSTCWDNCVTNGSIMKKLYESGKIK 365 Query: 691 ------KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASS 744 L +IDE R L+ K I R A + G + +Q+I D+ D+ SS Sbjct: 366 WEDIVHFLILIDESHRWLNVKKLYALNLISIYMREAPKFFGGIMMASQSIRDYVPDENSS 425 Query: 745 AA----RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 + + + + YK I Q + ++++ + QR+ I Sbjct: 426 SGVDELKKLFELTQYKFIFHQDSSALPLLDKIFENVLTYEQRNRI 470 >UniRef50_Q0ZNV8 Putative TrbE protein n=1 Tax=Sulfolobus islandicus RepID=Q0ZNV8_SULIS Length = 668 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 85/512 (16%), Positives = 187/512 (36%), Gaps = 67/512 (13%) Query: 316 HSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 ++ + ++++ S ++ E + ++ ++ I + D Sbjct: 170 EAKLDYHIAAFKREAARRSLTTTTSWRQKHMEHLNVLEQDRINNATTHKITYMIILYDND 229 Query: 376 NN--ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 N A + + ++ ++ P+F + ++ Sbjct: 230 LNVLREATDSIRANAKTWCATKLDV--PKFVQAEML---------QNYRIDWVRLTMITT 278 Query: 434 AESFNVANLMPLVADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 ++ L P V + + G+ T R I+ + R + N ++ V G SGAGK Sbjct: 279 --DVRLSYLYPFVDSSIVEQGGIFFAITDRGSPVVINPWDRKLKE-NGHIIVTGFSGAGK 335 Query: 493 TGLIQP----LIRSVLDSGG--FAVVFDMGDGYKSL-----CENMG----GVYLD-GETL 536 T + L++ + + F V D Y + + +++ G+ + Sbjct: 336 TTSMAAFQYRLLKRLKERNEPFFLFVLDPIGNYNRFYNEFIAKELDLDIENKFIEEGKQM 395 Query: 537 RFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID-- 594 +P + +D +A + L+ + E+ + + + RI Sbjct: 396 GLDPL-LLHALDPAAMPIEMALNYLYQAFEVPPELRGVIDIATMTGLIKIDGQEKRITNL 454 Query: 595 -DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 ++ +FLK++S+ + S I ++ G F + P + ++ Sbjct: 455 RELYEFLKDSSNEMEREASYYIGRAVE------------GALRNIFMGEPPKFEKNVVII 502 Query: 654 VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI 713 + + L M L+ I ++Y P+++KK+ VIDE R+L ++ + Sbjct: 503 GFRINDITT----LQVSMGLLLNAILVKIYSLPKSIKKIVVIDEAHRIL--ARRELAYIM 556 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS-----AKEFAK 768 + +R R + I ++Q I DF + S A+A + N++ +IILKQ KE A+ Sbjct: 557 SRFFRETRNLNTSVIAMSQLITDFTT---SEEAKAVYENAATRIILKQKDGKLVEKELAE 613 Query: 769 YNQLYPDQFLPLQRDM----IGKFGAAKDQWF 796 + L ++ +QR I G + + Sbjct: 614 FAGLSENEIEFVQRASPGMGILNMGNIRTPIY 645 >UniRef50_B3DQX8 Truncated type IV secretory pathway VirB4 component protein n=2 Tax=Bifidobacterium longum DJO10A RepID=B3DQX8_BIFLD Length = 668 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 90/636 (14%), Positives = 194/636 (30%), Gaps = 66/636 (10%) Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 +V+ L + + + + I + + L + + + R Sbjct: 77 DVVDRWGRFLNS-VGENMGVQITVATRMLDPEEVTRSIAMPLRGDMLDGLRGDFNRNVRR 135 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI- 195 + A L LTLR + + + V A L+ Sbjct: 136 RLAGRSQGAVTDKYLTLTLRE------------RDGERAVTLLNRAVLRATAQLRSVGGC 183 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 +D ++ ++++ M+ ++ + L + V F + V L Sbjct: 184 VGVRLDRRSRLEVLHGMLRRGTRFMFDEDGFLKSHGMSTKDYVAP-FAVDVSDRR---RL 239 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS-----CPFILTLTLVVE 310 R + + + P+ S++ + + I+ P L + Sbjct: 240 RLSSGTTEVWHQCLLVRDFPDYLS----DQLVSSITDIKADITVGIHLSPRGKAEGLKLV 295 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFP-SVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 ++ + + + + P +++ + GELR L +V L I Sbjct: 296 NRTIAEMDMQAIDERRKNRKQHLPEDMLPHDLQESMSQAGELRDDLEHNGDRLVD-SLMI 354 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 D+ E + +D+ + + + + LP + Sbjct: 355 VDVSADSREQLDQTVRDVTAAIDGQSCVAETLAYMQVEGLNAVLPLGNPLPPMR------ 408 Query: 430 VVQRAESFNVANLMPLVADNPLTPAGLL--APTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 + + + A L+P + P G+ A ID N N + GT Sbjct: 409 --RTLTTSSAAILVPFTSQELFEPGGVFHGANARTGNPVVID----RTKGMNGNGFILGT 462 Query: 488 SGAGKTGLIQPLIRSVL--DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFA 542 +G+GK+ + I + +V D + LC+ +GG + + N Sbjct: 463 TGSGKSQAAKNEITQIYLTRPDDDLIVIDPEHEFTPLCDGLGGERVEIGESSRAHINALD 522 Query: 543 NITDIDQSAERVR-------DQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD 595 + D + +R + L V+ +D + L+ + V + + Sbjct: 523 IEYEDDSEGDPIRSKCASVLNMLGVLIGGQDGIDRMQRSLIDRTVIGMYREVREHPELG- 581 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 + L D P R + L+ Y A G+ + S + ++ +V Sbjct: 582 -MPTLATLHDRLAALGEPGGR----DAARALEIY-ATGSLNAF--SHATDVDTSSRFLVY 633 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK 691 ++ GL L M ++ I NR+ R R ++ Sbjct: 634 DVSGLGA--ELRTFGMLVVLDQIWNRVVRNRRLGRR 667 >UniRef50_B2CG16 Fused VirB3/VirB4 n=2 Tax=Campylobacter fetus subsp. venerealis RepID=B2CG16_CAMFE Length = 929 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 95/593 (16%), Positives = 183/593 (30%), Gaps = 95/593 (16%) Query: 229 PYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYS 288 P + L++ + ++ + L + + + L P ++ +S Sbjct: 316 PNAPLDFYLNGNLNEIFPSQHTMQLNYNDG---TRKFVKAIELKDYPNVS--------FS 364 Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 + + + + + +T + + + E L K+ K A ++ + E Sbjct: 365 GIFDSLMYANVEYTITQSFTPLSKKEARDE-------LTKQQKRLMAAEDDAIS-QISEL 416 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 L S Y +I + D + I + GF Sbjct: 417 SSALDELQSD-IIFGEYHFSIVIYA-DKQNECERIANQIAVVLQDLGFLATQANIALEAT 474 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTY 461 + LP + S N A+ M L NP A + T Sbjct: 475 YFAQLP--------ANFMLRPRLHTISSKNYASFMALHNFPRGKQQGNPWGDAIAILQTP 526 Query: 462 RNQLAFIDI----FFRGMNNTN---YNMAVCGTSGAGKTGLIQPLIRSVLDSG------- 507 Q F +I F + N N V G SG GKT L+ + + Sbjct: 527 NGQPFFFNIHKTNFQKDEFGKNDVLANTFVLGQSGGGKTVLMNFTLNMLCKYNELETFAD 586 Query: 508 --------GFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRD 556 D G +GG Y+ G+ FNPF ++ R++ Sbjct: 587 STPKDKRKATYFYLDKDKGALGNIMTIGGKYVMITSGQPTGFNPFCCEATP-ENIRRLKV 645 Query: 557 QLSVMASPNGN----LDEVHEGLLLQAVRASWLAKENRAR--IDDVVDFLKNASDSEQYA 610 + ++ + G L E L AV + +++ + V L+ + Sbjct: 646 LMKMLVTKGGQTHLMLTTRDEEQLNLAVDSVMRLEKSDRTHGVSRVWQLLQEGENETS-- 703 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGG--LEDRPSLL 667 + L +T +G F+++ +L D ++V + G L + Sbjct: 704 ----------SLKSRLMAWTIGNEFGWVFDNETDTLDFSDENILVYGIDGTDLLSDDEIS 753 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 V + ++ I + + + IDE W L KN V + + +T R+ G Sbjct: 754 PYVAYYILWRIIDMV----DGRRFGLFIDEAWDWL--KNPVVSKEVFNKEKTIRKENGFL 807 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIIL---KQSAKEFAKYNQLYPDQF 777 TQ++ D S A S ++L K ++ + + ++ Sbjct: 808 FLGTQSVEDIAK---SDIGTAIMEQSETILLLSNPKAKEDDYCRALNMSEAEY 857 >UniRef50_UPI00004A2EB8 VirB4-like protein n=1 Tax=Moraxella bovis Epp63 RepID=UPI00004A2EB8 Length = 828 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 90/593 (15%), Positives = 183/593 (30%), Gaps = 71/593 (11%) Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 L P L + L++ + L + V K + + + Sbjct: 233 LKDFPNRTHL-------GLFDSASLALPFEYNLVQSFVALAPAKALTRIERQANQMRSAD 285 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 + + +E E + + SG+ + Y ++ F D + A+ + S Sbjct: 286 DKAV--------HQREELLEAQGFITSGEQILGEYHCSLMVF-GDTIDQAVNNVNEANAS 336 Query: 391 F-RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF-----NVANLMP 444 F K G + F + P LK + + S A+ P Sbjct: 337 FSNKAGAVFKKASVSAPATFFSQFP-TYRYKPRPMLKTSRNLASTFSLHNYSTGKAHGNP 395 Query: 445 LVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQP 498 L + + P T L + F + N + + G +G GKT L Sbjct: 396 LGDGSAVVP----LETVAKTLYNFNFHFTNIGENNVGEAVAGHTLILGATGTGKTTLQSA 451 Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVR 555 + V D G + G Y + + NPF + + R+R Sbjct: 452 MTVFVQRFNPAMFCLDKDRGMDIFIRALDGDYFAIEENKPTGINPFQF-----EDSPRLR 506 Query: 556 DQLSVMA-----SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYA 610 D L+ + N + + AV R+ ++ L + + YA Sbjct: 507 DFLNTLVVACATDKNHECTSEEQNQIKMAVDTVMSLPFEYRRMSAILQSLPDKGGNSLYA 566 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVA 669 + D G Y ++ D K+V ++G + Sbjct: 567 RLVKWCTTDD---------YGQGAYAWVLDNPVNQFNPDDFKIVGFDVGSILKENYQPTE 617 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 + + ++Y+++ M + L L V++E W L +K + + + +T R+ + Sbjct: 618 PLLACLLYLKSEMTKNHPLL--LTVVEEFWLPLKYKTPR--DMMLDVLKTGRKRGEFMML 673 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ--FLPLQRDMIGK 787 +TQ+ + + A + KI+L E+ + + ++ Sbjct: 674 VTQSPEEAVQSEIFP---AIIQQTPTKILLPNPDAEYKNEQGGGYIRVGLTEKEFAILKS 730 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKE 838 FL++ SS+ ++ + S + SS + E + + Sbjct: 731 LSTQSRI----FLIKQGQQSSFAKMDLYGFSDEISVLSSTKENVELLDNLLSK 779 >UniRef50_D2P3D1 Putative uncharacterized protein n=1 Tax=Listeria monocytogenes 08-5578 RepID=D2P3D1_LISMO Length = 652 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 86/557 (15%), Positives = 168/557 (30%), Gaps = 95/557 (17%) Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 K A + D+ + +S K ++ + + + I + Sbjct: 80 KEQGRAASEERDIGNQLDSS---------KSVQDMARMYMNINEAGEVIRYLNSRIFVYA 130 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 K + + + ++ F+ + ++ ++ Sbjct: 131 K-TLQELEDRAKQVMEDLESRSFQGQVLLAEEQYEWND---LFDNYEQMQKHPNKRKGKQ 186 Query: 434 AESFNVANLMPLVADNPLTPAG-LLAPTYRNQLAFIDIFFRG-MNNTNYNMAVCGTSGAG 491 E VA + L P G LL T D F YN + G +G Sbjct: 187 VEGATVAGGFQFHYNFLLDPTGSLLGITDSGGKVLFDYFLNDFKKRVYYNGVIIGDMRSG 246 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPFANITD--- 546 K+ ++ L+ G VFD+ ++ L E + G + DG NPF Sbjct: 247 KSTTLKKLLLDNKQRGNNIRVFDVTGEFRPLVEKLNGKIIVLDGTEGHLNPFQVYRSNSE 306 Query: 547 --------------------------IDQSAERVRDQLSVMA-------------SPNGN 567 D + +R+ +++ P+G Sbjct: 307 GNEEAVGKQAFTKHVSKMSMLFRYLAPDADGKTIREFENMLYDFYCYYGLIVKVDHPDGE 366 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN------ASDSEQYAESPTIRSRLDE 621 + + L + E D++ FL+ + E ++ Sbjct: 367 EERIENKYLYAGITE--KTPEEYPIFSDLLIFLRKEIYTDPLAKKEVRRVKDYLKENEQT 424 Query: 622 MIVLLDQY----TANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLI 675 +LLD + YG FN ++V L L ++ A M+S++ Sbjct: 425 KNILLDIEGIIVNSVNVYGSLFNHHTTIEDFSNEQVVAFSLRELVSYTSNIYSAQMYSIL 484 Query: 676 IYIENRMY---------RTPRNL------KKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 + + + T R + + L +IDE R+++ N + + + R A Sbjct: 485 TLLWDDLIQTGTPMWKKWTNREIAFNDVTRTLILIDEAHRVINVDNIMLVKELTTFEREA 544 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAW-------GNSSYKIILKQSAKEFAKYNQLY 773 ++ + +Q+I DF + AS +A + YK I+KQ A + + Sbjct: 545 PKYFAGLLFASQSIRDFVPENASEDDMSAIGEIIKLFELTQYKFIMKQDANAVNLLTKTF 604 Query: 774 PDQFLPLQRDMIGKFGA 790 Q + I F Sbjct: 605 AGQLSENEVGSIPAFEK 621 >UniRef50_A9HT13 Type IV secretion n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HT13_GLUDA Length = 848 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 118/787 (14%), Positives = 240/787 (30%), Gaps = 73/787 (9%) Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV 160 ++ + + Y E S G A + A Q + LR Sbjct: 107 LAQSRLVHVLVYEDPEASKGGLITSLLRQGPFALFDSDAREQVKQRFSALGQMLLRE--- 163 Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL 220 K+ R E+ K ++ A + + + N L Sbjct: 164 -----REISKRLRELERACEDARKKWEMAMGSA----RRMPLDQLWTFAKFLGTMNTRYL 214 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIA-F 279 + P DL+ ++ Y + ++ L + PE Sbjct: 215 RFGQYLTTPEDDLDAVLMDGDVS---TVSYHGAEMLMLHGLVPNYAVSMGLVKTPENPIG 271 Query: 280 LWNMADNYSNLLN-PELSISCPF----ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 +W ++S + I+ F + L+ ++ + + L K T+ Sbjct: 272 MWTRQKDHSPIAQEGNYIININFSPLSAIRRYLLFQNARNSLDRQRVDVRQLFKGQPTTE 331 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 A+ + E KE + +R S + + F DN + +E + + + Sbjct: 332 AERQATETYEIKEAQKQLERASSLDERFGTISGQVVIF-GDNPDAVIEDAERMTTAMEAT 390 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL-------MPLVA 447 L+ + F + G ++ V F +L P V Sbjct: 391 QARLVWEKTGLPNAFKS-----LQIGGYRNSDRT-TVGTESRFGAVSLYAAPAIGTPEVE 444 Query: 448 DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG 507 D A + T + + G T G +G+GKT + L G Sbjct: 445 DLGGEEAQYIFETEDGNPFYYSSYAGGKAFT----FAVGPTGSGKTFFKNTITSHFLKYG 500 Query: 508 GFAVVFDMGDGYKSLCENMG--GVYL-------DGETLRFNPFANITDIDQSAERVRDQL 558 GF D+ G + L G G + GE +PF + + +A + Sbjct: 501 GFVRSLDVDAGSEPLAHAFGKDGGIIRLGEDDASGEPRGIDPFVSFRGVGDTA--FTSHI 558 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 + ++++ E + L + +D+ + S+ + Sbjct: 559 IDLCRLLLDVNDNEETRV--------LTGREQQTLDEAIIATLEISNPNLRTFRHMLAHL 610 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSL-RDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 +E+ ++ NG Y FN+ + + ++ V+ L ++ P ++ V+ L Sbjct: 611 PEELGYKFARWMTNGVYDGIFNARQDGMGDSSKRIGVINLHKFKETPKIIKPVLLDLFYR 670 Query: 678 IENRMYR-TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 + R + K +DE L E I RT R+H +Q + Sbjct: 671 VTTLFEDPAMRMIPKQLDVDEAH--LPLSVPGFAERITTKARTWRKHMAGITMWSQGARE 728 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWF 796 + + R A ++ I + + + Y Q + + P DMI K ++ Sbjct: 729 YATLPDWDVLRGA---ATQFIFMADPRMDESAYQQAF--KITPGVIDMIRKLTPREEA-- 781 Query: 797 SSFLLQVENHSS-WHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 ++Q + + +L V+P + +S + +E E + + Sbjct: 782 --VIVQPDLGVAKKVKLRVEPEQYVINTSHPREASERDLLMRE-YGPAEGLRAAVERYKA 838 Query: 856 PEMASLE 862 ++ E Sbjct: 839 GKLGKEE 845 >UniRef50_C2C2P3 Possible vancomycin-resistant virulence factor n=2 Tax=Listeria RepID=C2C2P3_LISGR Length = 644 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 88/638 (13%), Positives = 197/638 (30%), Gaps = 79/638 (12%) Query: 224 RRQLDPYSDLNYQCVEDSFDLKVRA-DYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 ++ L +++ Q F ++ +T L + + ++ +H+ P A L+ Sbjct: 5 QKTLTKEEEIDKQGFYAPFIAAIQPQGGITFRLEKVVQKGSSYEAIYHVTVYPSEANLF- 63 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 L + + + ++ + S N L + + Sbjct: 64 -------WLEGIMGLDDIVVTKDVKHIDKEEAKDSIGNSIEEYLNRAYTEKKERGRVDAS 116 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPR 402 E E +L + + + + L + + + +D+ S GF+ Sbjct: 117 LEYNEIKDLYELVSKNKEVMKRIILRLFITSP-TIQDLEQRIRDVQTSIETEGFQADVFS 175 Query: 403 FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TY 461 +L+ + Q ++ +A +P + P + + Sbjct: 176 NETEYEYLSKF---VSFSEQESYPNKRYGQPIQASALALGVPFTGVSLRDPRAIYWGESR 232 Query: 462 RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 F D+ ++++ G GAGK+ I+ L L G + D+ Y Sbjct: 233 TGGPIFWDVTHVDKFRKSFDIVGVGKKGAGKSTTIKKLTDERLMKGDYIRALDVTGEYTE 292 Query: 522 LCENMGGVYL--DGETLRFNPFANITDIDQSAERVRDQLSVMASP----NGNLDEVHEGL 575 GG + DG + N + + ++ + + N N E Sbjct: 293 QAIQRGGTVISMDGSSGVLNILEIMRTGETNSVCWSLHTTKLKQFYKQINQNASENELST 352 Query: 576 LLQAVRASWLAKE------------------NRARIDDVVDFLKN------ASDSEQYAE 611 + + A + + D+ + ++ + Sbjct: 353 FSEVATDLYKAYGLYLPTDLEEINMVNRPSTDYPILSDLREHVRQVLYKNGLNGHMNEDI 412 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP-SLRDDAKMVVLELGGLEDRPSLLVAV 670 S + ++ L+ + ++ +N YG FNS +D VV + + D + A Sbjct: 413 SLSKQNYLENIETTINDLISN--YGNMFNSHSTIQKIEDIPFVVFNMQNVVDM-EIFPAQ 469 Query: 671 MFSLIIYIENRMY-----------RTPRNLK----KLNVIDEGWRLLDFKNHKVGEFIEK 715 +F+++ M+ R +L+ V DE +L+ + + ++K Sbjct: 470 LFNILYLNWRGMFHIGGPQLEMYRRNEIDLEDVHFYFTVFDEAHHILNTRYPDAIKQLKK 529 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAAR-------AAWGNSSYKIILKQSAKEFAK 768 R R++ TQNI D + + + + YK+I++Q Sbjct: 530 FSREGRKYFAGLWLFTQNITDLVPSNGADQSSEVVRDIISLLEMAEYKMIMQQDPNSMDV 589 Query: 769 YNQLYPDQFLPLQRD---------MIGKFGAAKDQWFS 797 ++ + F + MI K+ FS Sbjct: 590 VRNVFKNTFSESELQAIPQLEQGEMILSLSTVKNIRFS 627 >UniRef50_B9DXM8 Putative uncharacterized protein n=9 Tax=Firmicutes RepID=B9DXM8_CLOK1 Length = 648 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 76/482 (15%), Positives = 172/482 (35%), Gaps = 55/482 (11%) Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 ++ L + +T A E ++ + + + + + I Sbjct: 128 SNAANKNRLSKSNTNDLQQTVMA------ESNLQDVATIVAQAHRNREPFIHSAVYIELS 181 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 D ++ L ++ +++ ++ + + F +P + + Sbjct: 182 AHDLDQLKL-LQTEVMTELIRSKLNVDRLMLRQQQGFQCVMPSGF------NVFRYQFER 234 Query: 433 RAESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 + +VANL P G + +D R + TN N+ + G SG G Sbjct: 235 VLPASSVANLYPFNYSGKTDANGFYVGRDKFGSNVLVDFNKRADDKTNANILILGNSGQG 294 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFANIT-DID 548 K+ L++ ++ ++ +SG D Y+ L N+GG ++D N T D + Sbjct: 295 KSYLLKLILCNLRESGMNITALDPEMEYEDLTNNLGGCFIDLMSGEFIINVLEPKTWDEN 354 Query: 549 QSAE--------RVRDQLSVMASPNGNLDEVHEG----------LLLQAVRASW------ 584 S E R+ +LS S + ++ ++LQ + A + Sbjct: 355 GSPEDKDAPQTFRISSKLSQHISFLKDFFRTYKDFTDREIDTIEIMLQKLYAKFGISDST 414 Query: 585 ----LAKENRARIDDVVDFL-KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 L ++ + D+ + + ++ + L +++ L G ++F Sbjct: 415 KFDRLTAKDYPILSDLYALIEEEYKAFDENSRQLYTAELLQNILLGLHSICK-GAESKFF 473 Query: 640 NSDEPSLRDDAKMVVLELGG-LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 + + D+ V + G L+ SL A++F+++ Y+ N + N IDE Sbjct: 474 DGH--TNITDSSFVTFGVKGLLQASKSLKNALLFNILSYMSNELLT---NGNTAASIDEF 528 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 + L N E++ + R+ + I +QN+ DF+ + + + +++ + Sbjct: 529 YLFL--TNLTAVEYVRNFSKRVRKKDSSVIIASQNLEDFNIEGIREYTKPLFSIPTHQFL 586 Query: 759 LK 760 Sbjct: 587 FN 588 >UniRef50_C2JSV3 Conjugal transfer protein n=12 Tax=Enterococcus faecalis RepID=C2JSV3_ENTFA Length = 796 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 91/640 (14%), Positives = 209/640 (32%), Gaps = 56/640 (8%) Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + Y +F + S K+ ++ M+N A+ + + + + Sbjct: 145 NFKIEKYAIFTTKSSSMKQANKELEGIMQNFANRFEAN--QIKLEVTPMTGLERLSLFSY 202 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + H + Q S L + +K + L EN + Sbjct: 203 FLRHGQ--YFGTSYQDIAVSGLTSKAFIVPSKIKFPNNKAYFRLGENYAAV------LTI 254 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISC-PFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 + P+ + + + +SI P+ + KT ++ ++ + Sbjct: 255 QQYPKYLEDKLIKELCATGRELAISIHARPYDMMEARKAIQGTKTLNDVAIQKQQKQNFR 314 Query: 331 KTSYAKWFPSVEKEAKEW-GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 KE +E L + + + + ++ + + LE + + N Sbjct: 315 SGVSEDAISGEAKEIQETTNALIDEIKNNGQKLFNGLFSVFLIA-ETEKELLEAVESVKN 373 Query: 390 SFRKNGFELISPRFNH--MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 ++++ ++ T LP E ++ + N+A +P Sbjct: 374 V--GATWQVVFDTVDNYKEEALNTILPIGKPYLDV----EMSYMRDLTTTNIATQVPFTN 427 Query: 448 DNPLTPAGLLAPTYRNQLA-FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ--PLIRSVL 504 + G RNQL + R + + + GTSG+GK + L + Sbjct: 428 VELQSSTGQFYG--RNQLTKNMITIDRKKDLITPSGLIFGTSGSGKGMATKWEILSTRLK 485 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPF--------ANITDIDQSAERVRD 556 ++ D Y + + + LD T N + + DQ + V++ Sbjct: 486 FPKDRFLIVDPESEYLPIGKELDAEILDISTGTKNHLNILGMVDKQLLDEEDQELDLVKE 545 Query: 557 QLSVMASPNGNL----DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES 612 + +++++ +L +V GL+ + ++ EN+ +VD+ + + Sbjct: 546 KSNLLSTMFESLLKSYTDVDAGLVDRVTLLTYERFENKETEPTLVDWFRILKEQTDEG-- 603 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 E+ ++ Y F + + ++ A +V L+DR L M Sbjct: 604 ------AKELANKVETYCVGSQ--DIF-AHQTNIDLTAPFIVFNTKKLDDR--LKKFAMK 652 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 ++ + ++ + DE ++F + E+ + R++ ITQ Sbjct: 653 VILDQLWKQVVSGQGKVTSRLYFDE--LQVNFTTEEEAEWFLNLWARIRKYGAVTTGITQ 710 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 N S A + NS + I+L+Q + + ++ Sbjct: 711 NPTTLLD---SKAGQKMIANSEFLILLRQKPIDSQRLVEI 747 >UniRef50_B5Z4X1 Conjugal transfer protein n=3 Tax=Escherichia coli O157:H7 RepID=B5Z4X1_ECO5E Length = 792 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 105/706 (14%), Positives = 209/706 (29%), Gaps = 81/706 (11%) Query: 171 KSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPY 230 + +E+++ L+ S VD + ++ + ++ + + Sbjct: 133 DVDKGLERLEDIISQAMVVLKPFSAWLLKVD-KNYVSETADYLSCLINKKHTIIP--VSS 189 Query: 231 SDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNL 290 + L D D L L E+ N+ L P M Sbjct: 190 TPLYESI--ADSDWYFGNDTLELRNNESDD--KKFATNYVLKDFP-------MFTTPGQW 238 Query: 291 LNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGE 350 + L + FI+T + + E KT + + + + + + + +E Sbjct: 239 -DFLLKLPYEFIITQSFLFEAPAKTVRKIDSQLNKMGSTGD--------AAKSQQEELIA 289 Query: 351 LRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF--RKNGFELISPRFNHMRN 408 + + SG + SY +T F D E A + + + F GF Sbjct: 290 GKDFVTSGTNLFGSYHCVLTVF-GDTAEAARKNGIKVSSEFITTGKGFRFSRATSAAPYV 348 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG-----LLAPTYRN 463 F + LP + L + A + N + P G + T + Sbjct: 349 FFSHLPMNKTRPLSTRRTAANLACTFSLHNYSA-----GKKSGNPIGDGSALMPLKTVSD 403 Query: 464 QLAFIDIFFRGMNNT------NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGD 517 L + + + N + + G +G GKT + + V D Sbjct: 404 GLYYFNTHYSDPNKNVTGQRIAGHAMILGATGTGKTTFEGAAAGFLQRFDPYMFVIDYNR 463 Query: 518 GYKSLCENMGGVYL---DGETLRFNPFANITDIDQSA-ERVRDQLSVMASPNGNLDEVHE 573 + GG Y +G NP+ D +R+ L +A + + Sbjct: 464 STELFVRAYGGSYFALQEGVFTGLNPWQLAEDESSPIWKRLLAFLKSLAKAFVRDNMGNP 523 Query: 574 GLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 QA+ +D V+ L + + E+ + L ++ NG Sbjct: 524 CSDQQAIE-----------MDAAVESLMTMPVQLRRTSALLQIVNDSELRIRLAKWCKNG 572 Query: 634 TYGQYFNSDEPSLR-DDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTPRNLK 690 Y +S E + D K V + + + A L I + Sbjct: 573 AYSWATDSPENTFNPMDYKKVGFDTTVILEKVNGETHPACEPLLAILFFYKTLMQRDGKL 632 Query: 691 KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAW 750 L +++E W +F + I+ + R +Q+ D + + A Sbjct: 633 MLTIVEEFWMPANF--PLTQDMIKSALKAGRLKNEMMWLTSQSPEDAVNCAIFA---ALV 687 Query: 751 GNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH 810 ++ KI+L EF Y ++ + + + L++ S++ Sbjct: 688 QQTATKILLPNPDAEFDGYKKI---GLVEKEFKKLKSLSKESRT----MLIKQSGSSAFA 740 Query: 811 RLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGP 856 ++ + DF V EG+ + E V + Sbjct: 741 KMDLYGF---------DDFLPVISGTTEGIVLCEQVREELGTDEPD 777 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P18004 Protein traC n=51 Tax=root RepID=TRAC_ECOLI 806 0.0 UniRef50_B6ICF6 TraC protein n=1 Tax=Escherichia coli SE11 RepID... 674 0.0 UniRef50_A4WGS7 Type IV secretory pathway VirB4 components-like ... 642 0.0 UniRef50_D2TZZ8 Conjugal transfer ATP-binding protein TraC n=1 T... 620 e-176 UniRef50_A1WDF4 Putative uncharacterized protein n=3 Tax=Burkhol... 603 e-170 UniRef50_A0B4N6 Putative uncharacterized protein n=1 Tax=Burkhol... 566 e-159 UniRef50_D1RMN8 Type-IV secretion system protein TraC n=2 Tax=Le... 560 e-158 UniRef50_Q0F363 Putative uncharacterized protein n=1 Tax=Maripro... 549 e-154 UniRef50_C5ANL2 Putative uncharacterized protein n=2 Tax=Burkhol... 547 e-154 UniRef50_B6ESX9 Conjugative transfer protein TraC n=14 Tax=Vibri... 546 e-153 UniRef50_A4XE86 Type IV secretion/conjugal transfer ATPase, VirB... 545 e-153 UniRef50_D0SGY4 Type IV secretory pathway protein n=1 Tax=Acinet... 544 e-153 UniRef50_Q1N8Z9 ATPase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8... 543 e-152 UniRef50_A3VN21 TraC n=1 Tax=Parvularcula bermudensis HTCC2503 R... 542 e-152 UniRef50_B8EFP1 Type-IV secretion system protein TraC n=6 Tax=Sh... 542 e-152 UniRef50_A8QYQ2 TraC protein n=2 Tax=Legionellaceae RepID=A8QYQ2... 538 e-151 UniRef50_C5T9V4 Type-IV secretion system protein TraC n=5 Tax=Be... 530 e-149 UniRef50_C5SIK7 Type-IV secretion system protein TraC n=1 Tax=As... 513 e-144 UniRef50_Q1MY39 ATPase n=1 Tax=Bermanella marisrubri RepID=Q1MY3... 512 e-143 UniRef50_C4NVU8 TraC n=29 Tax=Gammaproteobacteria RepID=C4NVU8_E... 512 e-143 UniRef50_B4RLR8 TraC n=10 Tax=Neisseria RepID=B4RLR8_NEIG2 507 e-141 UniRef50_B2I3Z2 Type IV secretory pathway, VirB4 component n=1 T... 504 e-141 UniRef50_B7XGR7 Putative pilus assembly protein n=2 Tax=Pseudomo... 502 e-140 UniRef50_Q5ZTS4 TraC n=1 Tax=Legionella pneumophila subsp. pneum... 498 e-139 UniRef50_Q2LTZ9 Sex pilus assembly protein n=3 Tax=Deltaproteoba... 492 e-137 UniRef50_Q8L274 Pilus biogenesis protein n=5 Tax=Gammaproteobact... 490 e-136 UniRef50_Q3IUW4 TraC n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 483 e-135 UniRef50_Q6MB95 Putative inner-membrane protein traC n=1 Tax=Can... 483 e-134 UniRef50_Q5NX56 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 475 e-132 UniRef50_A4JTN9 Sex pilus assembly protein n=2 Tax=Burkholderial... 466 e-129 UniRef50_A0R7Q8 Sex pilus assembly protein n=1 Tax=Pelobacter pr... 450 e-124 UniRef50_Q1RJF1 Conjugative transfer protein TraC n=35 Tax=Ricke... 433 e-119 UniRef50_Q19NS3 TrhC n=11 Tax=Enterobacteriaceae RepID=Q19NS3_ECOK1 431 e-119 UniRef50_Q4HPB0 Conjugative transposon protein TraG, putative n=... 431 e-119 UniRef50_B7J837 Type-IV secretion system protein TraC n=1 Tax=Ac... 429 e-118 UniRef50_A0L303 Type IV secretory pathway VirB4 components-like ... 416 e-114 UniRef50_B0RL05 Type IV secretory pathway VirB4 component n=2 Ta... 400 e-109 UniRef50_Q1NGT3 Sex pilus assembly protein n=1 Tax=Sphingomonas ... 398 e-109 UniRef50_D0Z4T2 IncF plasmid conjugative transfer pilus assembly... 398 e-109 UniRef50_A9AU11 Type IV secretion system protein n=1 Tax=Burkhol... 397 e-108 UniRef50_Q2NC54 Type IV secretion system protein B4, putative n=... 386 e-105 UniRef50_C0QUW6 Type-IV secretion system protein TraC n=1 Tax=Pe... 385 e-105 UniRef50_C4Z002 Putative inner-membrane protein TraC n=1 Tax=Ric... 384 e-104 UniRef50_Q9R2W4 Type IV secretion system protein virB4 n=30 Tax=... 383 e-104 UniRef50_A8F0L1 VirB4 n=48 Tax=Rickettsiales RepID=A8F0L1_RICM5 376 e-102 UniRef50_C9LWN3 Putative conjugal transfer protein TrbE part 2 n... 366 2e-99 UniRef50_Q07GT1 VirB4 protein, putative n=1 Tax=Roseobacter deni... 365 6e-99 UniRef50_Q9PHJ8 Conjugal transfer protein n=6 Tax=Proteobacteria... 364 1e-98 UniRef50_C7I4D6 CagE TrbE VirB component of type IV transporter ... 360 1e-97 UniRef50_Q1M9N8 Putative crown gall-like type IV secretion syste... 360 1e-97 UniRef50_D0L172 CagE, TrbE, VirB component of type IV transporte... 358 4e-97 UniRef50_B9JPS0 Type IV secretion protein n=1 Tax=Agrobacterium ... 358 6e-97 UniRef50_B4S9L3 CagE TrbE VirB component of type IV transporter ... 357 8e-97 UniRef50_C5TJS3 VirB4 protein n=2 Tax=Proteobacteria RepID=C5TJS... 357 9e-97 UniRef50_D0ZHN0 Type IV secretory pathway component n=1 Tax=Edwa... 356 3e-96 UniRef50_B0T9U2 CagE TrbE VirB component of type IV transporter ... 355 4e-96 UniRef50_B0T8Q5 Putative conjugal transfer protein TrbE n=2 Tax=... 354 1e-95 UniRef50_A4X0Q7 Type IV secretion/conjugal transfer ATPase, VirB... 352 3e-95 UniRef50_Q5DY65 VirB4 ATPase n=1 Tax=Vibrio fischeri ES114 RepID... 351 5e-95 UniRef50_C6XES2 CagE TrbE VirB component of type IV transporter ... 351 1e-94 UniRef50_A0AXD0 Type IV secretion/conjugal transfer ATPase, VirB... 348 5e-94 UniRef50_B6A599 Type IV secretion/conjugal transfer ATPase, VirB... 347 1e-93 UniRef50_A3EW09 Probable conjugal transfer protein (TrbE) n=4 Ta... 346 3e-93 UniRef50_C5D061 Type IV secretion/conjugal transfer ATPase, VirB... 344 1e-92 UniRef50_Q4UW68 VirB4 protein n=7 Tax=Xanthomonadaceae RepID=Q4U... 343 2e-92 UniRef50_P54910 Conjugal transfer protein trbE n=24 Tax=Alphapro... 343 2e-92 UniRef50_C5F2I9 Type IV secretion/conjugal transfer ATPase n=1 T... 342 5e-92 UniRef50_P17794 Protein virB4 n=18 Tax=root RepID=VIRB4_AGRT5 336 2e-90 UniRef50_C3WX74 Conjugal transfer protein TrbE n=3 Tax=Fusobacte... 335 4e-90 UniRef50_B1Y1W2 Type IV secretion/conjugal transfer ATPase, VirB... 335 4e-90 UniRef50_Q2NKG6 TrwK protein n=18 Tax=Proteobacteria RepID=Q2NKG... 334 1e-89 UniRef50_B5EKP3 CagE TrbE VirB component of type IV transporter ... 333 2e-89 UniRef50_B5TTQ0 TraE n=3 Tax=environmental samples RepID=B5TTQ0_... 332 4e-89 UniRef50_D2LJR2 CagE TrbE VirB component of type IV transporter ... 332 4e-89 UniRef50_Q1QFG8 Type IV secretion/conjugal transfer ATPase, VirB... 330 2e-88 UniRef50_Q0AD16 CagE, TrbE, VirB component of type IV transporte... 330 2e-88 UniRef50_Q2YIT8 Type IV secretion system protein virB4 n=43 Tax=... 330 2e-88 UniRef50_B7ABM5 Type IV secretory pathway VirB4 component, ATPas... 329 2e-88 UniRef50_C5SH59 Type IV secretion/conjugal transfer ATPase, VirB... 329 3e-88 UniRef50_A6UMV4 Type IV secretion/conjugal transfer ATPase, VirB... 329 4e-88 UniRef50_A1VQ79 CagE, TrbE, VirB component of type IV transporte... 327 1e-87 UniRef50_D0UIP4 ATPase n=5 Tax=Aggregatibacter actinomycetemcomi... 326 2e-87 UniRef50_A1B6Y4 AAA ATPase n=92 Tax=Bacteria RepID=A1B6Y4_PARDP 326 2e-87 UniRef50_Q2IEL2 Type IV secretory pathway VirB4 components-like ... 324 8e-87 UniRef50_B9KGH4 Secretion/conjugal transfer ATPase VirB3/4 n=11 ... 324 1e-86 UniRef50_Q9F245 ATPase n=3 Tax=Aggregatibacter actinomycetemcomi... 322 3e-86 UniRef50_Q1GN15 VirB4 protein n=18 Tax=Alphaproteobacteria RepID... 321 7e-86 UniRef50_UPI0001BC40AC conjugal transfer ATPase TrbE n=1 Tax=Fus... 320 1e-85 UniRef50_A3W6D5 Type IV secretion system protein B4, putative n=... 320 1e-85 UniRef50_A8PL22 CagE, TrbE, VirB component of type IV transporte... 320 1e-85 UniRef50_A5FU41 Type IV secretion/conjugal transfer ATPase, VirB... 319 2e-85 UniRef50_Q3JDC9 Putative uncharacterized protein n=4 Tax=Gammapr... 319 5e-85 UniRef50_D2QVN3 Type IV secretory pathway VirB4 protein-like pro... 318 7e-85 UniRef50_C2FTT8 Conjugative transposon protein TraG n=1 Tax=Sphi... 316 2e-84 UniRef50_C9RCA0 AAA ATPase n=1 Tax=Ammonifex degensii KC4 RepID=... 316 3e-84 UniRef50_Q6LGX0 Hypothetical TrbE protein n=1 Tax=Photobacterium... 315 5e-84 UniRef50_B2TSH9 TriC protein n=3 Tax=Enterobacteriaceae RepID=B2... 315 7e-84 UniRef50_Q7WZM0 Putative mating pair formation protein n=1 Tax=S... 314 8e-84 UniRef50_C2LLI5 Type IV secretory pathway, VirB4 component n=31 ... 313 2e-83 UniRef50_B2IAS2 Type IV secretion/conjugal transfer ATPase, VirB... 313 2e-83 UniRef50_Q120F2 Type IV secretory pathway VirB4 components-like ... 311 9e-83 UniRef50_Q0ACT3 Type IV secretion/conjugal transfer ATPase, VirB... 310 1e-82 UniRef50_Q6XGG0 Pilx3-4/VirB3-4-like protein n=23 Tax=Bacteria R... 309 2e-82 UniRef50_B0KAW2 Type IV secretory pathway VirB4 components-like ... 309 3e-82 UniRef50_A8ZR82 Type IV secretory pathway VirB4 component, ATPas... 309 3e-82 UniRef50_Q5I721 VirB4 n=1 Tax=Dichelobacter nodosus RepID=Q5I721... 309 4e-82 UniRef50_A9EBC2 CagE, TrbE, VirB component of type IV transporte... 308 5e-82 UniRef50_C3WQ25 Conjugal transfer protein trbe n=3 Tax=Fusobacte... 308 5e-82 UniRef50_A9I2D7 Type IV secretion system protein VirB4 n=1 Tax=B... 308 8e-82 UniRef50_B0ZDY6 Pilx3-4 protein n=16 Tax=Enterobacteriaceae RepI... 307 1e-81 UniRef50_D0SZZ9 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 307 1e-81 UniRef50_C8S1Y9 CagE TrbE VirB component of type IV transporter ... 305 6e-81 UniRef50_C9M9C2 Ribosome recycling factor n=1 Tax=Jonquetella an... 304 7e-81 UniRef50_A4XMV0 AAA ATPase n=2 Tax=Caldicellulosiruptor saccharo... 303 2e-80 UniRef50_Q2SSU5 Membrane bound ATPase, putative n=1 Tax=Mycoplas... 303 2e-80 UniRef50_A5IEK6 Type IV secretory protein VirB4 component n=7 Ta... 302 3e-80 UniRef50_C6N556 Type IV secretory protein VirB4 component n=3 Ta... 300 1e-79 UniRef50_A1WSV5 CagE, TrbE, VirB component of type IV transporte... 300 2e-79 UniRef50_C7WD64 Putative uncharacterized protein n=1 Tax=Enteroc... 300 2e-79 UniRef50_C2BRH4 Transfer complex protein n=1 Tax=Mobiluncus curt... 299 5e-79 UniRef50_C1SHE1 Putative uncharacterized protein n=1 Tax=Denitro... 298 6e-79 UniRef50_P55399 Probable conjugal transfer protein trbE part 2 n... 297 9e-79 UniRef50_A6V9Y0 Type IV secretory pathway, VirB4 component n=62 ... 296 2e-78 UniRef50_C1F4R3 Type IV secretion/conjugal transfer ATPase, VirB... 294 9e-78 UniRef50_C1XZE7 Putative uncharacterized protein n=1 Tax=Meiothe... 292 4e-77 UniRef50_Q46698 TraB protein n=9 Tax=root RepID=Q46698_ECOLX 291 8e-77 UniRef50_A6NYK4 Putative uncharacterized protein n=1 Tax=Bactero... 290 1e-76 UniRef50_C6BQD5 Type IV secretory pathway VirB4 components-like ... 290 1e-76 UniRef50_B9ZQ77 Type IV secretory pathway VirB4 components-like ... 290 1e-76 UniRef50_D1AV72 CagE TrbE VirB component of type IV transporter ... 289 2e-76 UniRef50_Q11ZH3 Type IV secretory pathway VirB4 components-like ... 289 3e-76 UniRef50_B9NXT4 Putative VirB4 protein n=1 Tax=Rhodobacteraceae ... 289 3e-76 UniRef50_A2UVZ8 Putative plasmid-related protein n=1 Tax=Shewane... 289 4e-76 UniRef50_B0K833 Type IV secretory pathway VirB4 components-like ... 289 5e-76 UniRef50_Q4QPC7 Putative uncharacterized protein n=12 Tax=Gammap... 288 6e-76 UniRef50_D1RHP7 Legionella vir-like protein LvhB4 n=1 Tax=Legion... 288 7e-76 UniRef50_D0Z5G8 Conjugative transfer protein TrbE n=1 Tax=Photob... 287 9e-76 UniRef50_B9MP37 AAA ATPase n=1 Tax=Anaerocellum thermophilum DSM... 287 1e-75 UniRef50_C3QQR1 Plasmid transfer protein n=32 Tax=Bacteroidales ... 287 1e-75 UniRef50_A8PLL0 ATPase n=1 Tax=Rickettsiella grylli RepID=A8PLL0... 286 3e-75 UniRef50_A9L6R4 CagE TrbE VirB component of type IV transporter ... 286 3e-75 UniRef50_C8WNA5 Type IV secretory pathway VirB4 protein-like pro... 285 5e-75 UniRef50_C6I0M0 Putative uncharacterized protein n=1 Tax=Leptosp... 285 7e-75 UniRef50_Q5ZW33 LvhB4 n=5 Tax=Legionella pneumophila RepID=Q5ZW3... 285 8e-75 UniRef50_A5KS14 Type IV secretory pathway VirB4 components-like ... 283 1e-74 UniRef50_UPI00004A2EB8 VirB4-like protein n=1 Tax=Moraxella bovi... 283 2e-74 UniRef50_C3WQT8 Conjugal transfer protein trbe n=2 Tax=Fusobacte... 283 2e-74 UniRef50_A3EW83 Putative uncharacterized protein n=2 Tax=Leptosp... 282 4e-74 UniRef50_B5Z4X1 Conjugal transfer protein n=3 Tax=Escherichia co... 282 4e-74 UniRef50_C3RFU1 Predicted protein n=9 Tax=Bacteroidales RepID=C3... 282 4e-74 UniRef50_C3CTH0 Type IV secretory pathway VirB4 component-like p... 282 5e-74 UniRef50_B2CG16 Fused VirB3/VirB4 n=2 Tax=Campylobacter fetus su... 282 5e-74 UniRef50_C7N9N6 CagE TrbE VirB component of type IV transporter ... 281 1e-73 UniRef50_C8WNM7 Type IV secretory pathway VirB4 protein-like pro... 280 1e-73 UniRef50_A5FFJ6 Bacteroides conjugative transposon TraG-like pro... 280 2e-73 UniRef50_C3DUE0 Hypothetical conjugation protein n=5 Tax=Bacillu... 279 3e-73 UniRef50_A9IYE3 Vbh4 protein 2 n=1 Tax=Bartonella tribocorum CIP... 278 6e-73 UniRef50_A5TXM1 Possible conjugal transfer protein TrbE n=1 Tax=... 276 3e-72 UniRef50_A4J314 Putative uncharacterized protein n=1 Tax=Desulfo... 275 6e-72 UniRef50_C0BU73 Putative uncharacterized protein n=2 Tax=Bifidob... 275 7e-72 UniRef50_A4V6R2 Putative uncharacterized protein n=1 Tax=Pseudom... 274 8e-72 UniRef50_C3KSP5 AAA ATPase n=2 Tax=Clostridium botulinum RepID=C... 274 9e-72 UniRef50_B4YK33 TagB4 n=4 Tax=Betaproteobacteria RepID=B4YK33_9BURK 274 1e-71 UniRef50_A0M144 TraG-like protein n=3 Tax=Flavobacteriaceae RepI... 274 1e-71 UniRef50_C8WH82 Type IV secretory pathway VirB4 protein-like pro... 273 1e-71 UniRef50_A6L0N6 Conserved protein found in conjugate transposon ... 273 2e-71 UniRef50_C7H9G2 Putative TraE protein n=5 Tax=Clostridiales RepI... 272 3e-71 UniRef50_Q8VRD5 TraB/VirB4-like protein n=1 Tax=Haemophilus infl... 272 5e-71 UniRef50_A8S5W5 Putative uncharacterized protein n=3 Tax=Clostri... 271 9e-71 UniRef50_B2TH83 CagE TrbE VirB component of type IV transporter ... 271 9e-71 UniRef50_Q4A7V5 TRSE-like protein n=2 Tax=Mycoplasma hyopneumoni... 271 9e-71 UniRef50_UPI00016C6849 Type IV secretory pathway VirB4 component... 271 1e-70 UniRef50_Q832B8 TraE protein, putative n=41 Tax=Bacteria RepID=Q... 270 1e-70 UniRef50_B3DVA0 Type IV secretory pathway, VirB4 component n=1 T... 270 2e-70 UniRef50_Q1JB81 TRSE protein n=26 Tax=Bacteria RepID=Q1JB81_STRPB 270 2e-70 UniRef50_Q9F525 TraE protein n=5 Tax=Gammaproteobacteria RepID=Q... 268 5e-70 UniRef50_Q84BZ9 Putative membrane-bound ATPase n=6 Tax=Spiroplas... 268 6e-70 UniRef50_B9Y5S2 Putative uncharacterized protein n=11 Tax=Firmic... 268 7e-70 UniRef50_C5J6G0 TRSE-like protein n=1 Tax=Mycoplasma conjunctiva... 268 8e-70 UniRef50_Q7M993 VIRB4 HOMOLOG n=1 Tax=Wolinella succinogenes Rep... 268 9e-70 UniRef50_C5ETG4 TRSE protein n=21 Tax=cellular organisms RepID=C... 267 2e-69 UniRef50_Q601R8 Transfer complex protein n=7 Tax=Mycoplasma RepI... 267 2e-69 UniRef50_A6ASB7 Conjugal transfer protein TraE n=3 Tax=Vibrio ha... 266 3e-69 UniRef50_D1PRT5 TRSE protein n=1 Tax=Subdoligranulum variabile D... 264 8e-69 UniRef50_C6LA09 Putative TRSE protein n=1 Tax=Bryantella formate... 264 1e-68 UniRef50_D1WC41 ATPase n=9 Tax=Lactobacillus RepID=D1WC41_9LACO 263 1e-68 UniRef50_C1F578 Type IV secretion/conjugal transfer ATPase, VirB... 263 2e-68 UniRef50_A6EBE8 Conserved protein found in conjugate transposon ... 263 2e-68 UniRef50_C2BD73 Putative uncharacterized protein n=1 Tax=Anaeroc... 262 5e-68 UniRef50_B9D147 VirB4 n=1 Tax=Campylobacter rectus RM3267 RepID=... 262 6e-68 UniRef50_Q3C0C2 Type IV secretion system protein VirB4 n=9 Tax=r... 260 1e-67 UniRef50_D2B290 Putative uncharacterized protein n=1 Tax=Strepto... 260 1e-67 UniRef50_B7U591 Putative uncharacterized protein n=5 Tax=Bacilla... 260 2e-67 UniRef50_Q21QJ8 Type IV secretory pathway VirB4 components-like ... 258 7e-67 UniRef50_B9BFI8 VirB4 protein n=1 Tax=Burkholderia multivorans C... 257 1e-66 UniRef50_B1F9A5 Component of type IV transporter system n=1 Tax=... 255 4e-66 UniRef50_C6J2V9 Predicted protein n=1 Tax=Paenibacillus sp. oral... 255 5e-66 UniRef50_D2S2X7 Putative uncharacterized protein n=1 Tax=Haloter... 253 2e-65 UniRef50_A4ITY7 TrsE n=7 Tax=Bacillaceae RepID=A4ITY7_GEOTN 253 3e-65 UniRef50_Q97HG4 Conjugative transfer gene TrsE homolog, ATPase n... 250 1e-64 UniRef50_C4G4W2 Putative uncharacterized protein n=1 Tax=Abiotro... 250 2e-64 UniRef50_Q9ZLT4 CAG pathogenicity island protein 23 n=101 Tax=He... 249 3e-64 UniRef50_UPI0001C42939 hypothetical protein BpOF4_20614 n=1 Tax=... 249 4e-64 UniRef50_Q6F059 Uncharacterized protein pXO2-09/BXB0008/GBAA_pXO... 248 8e-64 UniRef50_Q98QH8 TRSE-LIKE PROTEIN n=1 Tax=Mycoplasma pulmonis Re... 248 9e-64 UniRef50_B1I0C3 Putative uncharacterized protein n=1 Tax=Lysinib... 248 9e-64 UniRef50_D1PSM3 Putative uncharacterized protein n=1 Tax=Subdoli... 248 1e-63 UniRef50_Q3ZVN3 TRSE-like transmembrane ATPase n=8 Tax=Spiroplas... 247 1e-63 UniRef50_UPI0001979712 VirB4 type IV secretion ATPase n=1 Tax=He... 247 1e-63 UniRef50_A8L0V0 Type IV secretory pathway VirB4 protein-like pro... 247 2e-63 UniRef50_A7VRX8 Putative uncharacterized protein n=3 Tax=Clostri... 247 2e-63 UniRef50_A4VUZ6 Type IV secretory pathway, VirB4 component n=22 ... 246 2e-63 UniRef50_C4XEH5 Putative uncharacterized protein n=1 Tax=Mycopla... 246 4e-63 UniRef50_B2TS95 Putative uncharacterized protein n=8 Tax=Clostri... 245 4e-63 UniRef50_Q8E597 Putative uncharacterized protein gbs1135 n=2 Tax... 245 5e-63 UniRef50_C8WY82 Type IV secretory pathway VirB4 protein-like pro... 245 5e-63 UniRef50_B5UW44 TrsE protein n=1 Tax=Bacillus cereus AH1134 RepI... 245 8e-63 UniRef50_B0S4N6 TraE like protein n=1 Tax=Finegoldia magna ATCC ... 244 1e-62 UniRef50_Q8GJA2 VirB4 n=1 Tax=Campylobacter jejuni subsp. jejuni... 243 2e-62 UniRef50_B9EC75 Putative uncharacterized protein n=1 Tax=Macroco... 243 2e-62 UniRef50_Q8GCN3 TraE/TrsE family NTPase n=6 Tax=Mycoplasma RepID... 243 3e-62 UniRef50_B9NX71 Putative uncharacterized protein n=1 Tax=Rhodoba... 242 4e-62 UniRef50_D0RX90 PrgJ n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=D... 242 5e-62 UniRef50_O87213 TrsE protein (TraE) n=11 Tax=Lactobacillales Rep... 241 8e-62 UniRef50_B1Z654 Type IV secretory pathway VirB4 components-like ... 240 2e-61 UniRef50_Q1ZJS6 Putative uncharacterized protein n=1 Tax=Photoba... 240 2e-61 UniRef50_C7LKR7 Putative membrane protein n=3 Tax=Mycoplasma Rep... 240 2e-61 UniRef50_Q6MU50 Transfer complex protein TrsE n=2 Tax=Mycoplasma... 240 2e-61 UniRef50_C9C8C6 Tra protein n=5 Tax=Enterococcus faecium RepID=C... 239 3e-61 UniRef50_O25189 VirB4 homolog n=5 Tax=Helicobacter pylori RepID=... 239 3e-61 UniRef50_B2JXW2 CagE TrbE VirB component of type IV transporter ... 238 5e-61 UniRef50_C2HEY2 Conjugal transfer protein n=3 Tax=Enterococcus f... 238 6e-61 UniRef50_Q47SQ2 ATPase n=3 Tax=Streptosporangineae RepID=Q47SQ2_... 238 9e-61 UniRef50_Q3EN28 TRSE PROTEIN n=9 Tax=Bacillales RepID=Q3EN28_BACTI 238 1e-60 UniRef50_B8I092 Putative uncharacterized protein n=4 Tax=Clostri... 238 1e-60 UniRef50_A9HT13 Type IV secretion n=1 Tax=Gluconacetobacter diaz... 237 2e-60 UniRef50_C2JSV3 Conjugal transfer protein n=12 Tax=Enterococcus ... 237 2e-60 UniRef50_D1JWZ2 Putative uncharacterized protein (Fragment) n=2 ... 235 5e-60 UniRef50_A7VXU4 Putative uncharacterized protein n=1 Tax=Clostri... 235 5e-60 UniRef50_Q0GTZ5 TraE n=1 Tax=Lactococcus lactis RepID=Q0GTZ5_9LACT 235 8e-60 UniRef50_A1WP68 Type IV secretory pathway VirB4 components-like ... 235 8e-60 UniRef50_B6JNJ9 VirB4 type IV secretion ATPase n=15 Tax=Helicoba... 234 2e-59 UniRef50_Q73FZ8 Type IV secretion system protein VirB4, putative... 233 2e-59 UniRef50_B9LVJ9 Conjugation protein n=1 Tax=Halorubrum lacusprof... 233 2e-59 UniRef50_B1BPA3 Putative uncharacterized protein n=4 Tax=Clostri... 232 4e-59 UniRef50_B4WVR3 Putative uncharacterized protein n=1 Tax=Synecho... 231 1e-58 UniRef50_C6RJZ9 Putative type IV secretion system protein VirB4 ... 231 1e-58 UniRef50_B0FYU0 TrsE n=6 Tax=Staphylococcus aureus RepID=B0FYU0_... 230 2e-58 UniRef50_C8WSW7 Type IV secretory pathway VirB4 protein-like pro... 230 3e-58 UniRef50_C7CWC1 Predicted protein n=2 Tax=Enterococcus faecalis ... 229 3e-58 Sequences not found previously or not previously below threshold: >UniRef50_P18004 Protein traC n=51 Tax=root RepID=TRAC_ECOLI Length = 875 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 875/875 (100%), Positives = 875/875 (100%) Query: 1 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT 60 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT Sbjct: 1 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT 60 Query: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS Sbjct: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 Query: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME Sbjct: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME 180 Query: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED Sbjct: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 Query: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP Sbjct: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 Query: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS Sbjct: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG Sbjct: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY Sbjct: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP 540 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP Sbjct: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP 540 Query: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL Sbjct: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL Sbjct: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA Sbjct: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL Sbjct: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL Sbjct: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 Query: 841 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA Sbjct: 841 SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 >UniRef50_B6ICF6 TraC protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF6_ECOSE Length = 868 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 401/869 (46%), Positives = 574/869 (66%), Gaps = 7/869 (0%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGF 64 ++ ++ L+ K PD S +A ++L EM +P F+ LLPYR Y+ +S LF+N T GF Sbjct: 1 MKGWQVLLSQLMGGWKKPDGSQQAQQILDEMDYPSFASLLPYRQYDPDSELFINAKTAGF 60 Query: 65 MLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQA 124 +LE P++GANE+I ++LD+ LR K+PR IPL L+ S V +E+GL +F W G++A Sbjct: 61 VLECRPLSGANEAISKSLDYFLRDKIPRKIPLTFTLVGSPCVRPMLEHGLADFRWQGKRA 120 Query: 125 ERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVK 184 + FNAITRA+Y +AA TQF +G PLTLRHYR+F+SY + E+ + Sbjct: 121 DEFNAITRAFYERAALTQFANKKG--YPLTLRHYRLFVSYAEEVGSLTEQKKTELNQVAN 178 Query: 185 IIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDL 244 + A L A + +Q VD + + +V E+ N ++ P + + LN +CV+ S L Sbjct: 179 RVVAGLASAGLWSQRVDKKGLVSLVRELANFRHGNIEPPNGSVAEFEPLNTECVDRSLRL 238 Query: 245 KVRADYLTLGLRENGRNSTAR--ILNFHLARNPEIAF-LWNMADNYSNLLNPELSISCPF 301 + D + L+ R ILNF L +NPE + LW M DN SN+ +P +ISCPF Sbjct: 239 MLHPDRIEQSLQSRRGGERERTRILNFMLEKNPEKPYALWQMGDNISNVTDPLCTISCPF 298 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 ++TL L VE+Q T EAN K++ L+KK+ + +AK+ PSV+K+A EWG LR+ L + Q S Sbjct: 299 VMTLALEVEEQAGTQREANRKFIQLDKKANSPFAKFVPSVKKQAAEWGGLRESLSTNQDS 358 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + ++ N+T FC+D +E ALE E +LN+FR+NG + P F +RN+L+ PFM +GL Sbjct: 359 LARFYFNVTLFCEDRDEVALETEMTVLNTFRRNGLSMYMPEFMQLRNYLSVFPFMMPEGL 418 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMN--NTN 479 + + +QRA + NVAN++P+VADN + GL P+YRNQL+F+++F R N Sbjct: 419 WSDICRTNAIQRARASNVANILPVVADNQVCLQGLPIPSYRNQLSFLNLFDRNAGLDTDN 478 Query: 480 YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFN 539 N++V GTSG GK+ L+Q +IR VLDSGG A VFDMGD YK LC N+GGVYL+ LRFN Sbjct: 479 NNLSVTGTSGGGKSFLMQGIIRQVLDSGGRAWVFDMGDSYKGLCRNVGGVYLNALDLRFN 538 Query: 540 PFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDF 599 PFANI DI SAE +R+ L V+A+P+GN D+ LLL+AV WL K+N ARIDD+V + Sbjct: 539 PFANIKDITASAESIRNLLVVLANPSGNCDDTFMSLLLKAVHEVWLRKKNSARIDDIVHY 598 Query: 600 LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 ++ A + +Y ++ T+RSR+DE+IV L++Y + G YG+YFNS++PSL D+ + VLE+G Sbjct: 599 MRKALEQPEYRDTTTVRSRMDEIIVGLEKYCSWGLYGEYFNSEKPSLDDNVRFSVLEMGE 658 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 L+D+P LL AVMFS++IY+E RMY + R K+ +IDE W+LL N + +FIE GYRT Sbjct: 659 LKDKPDLLAAVMFSMMIYVEQRMYLSDRQQHKVCLIDEAWKLLSKDNKRAEDFIENGYRT 718 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLP 779 AR++ GAYITITQ I DFD KAS AA+AAW NSS+KIIL+Q+ F KY PDQF Sbjct: 719 ARKYNGAYITITQGIEDFDGQKASGAAKAAWANSSFKIILRQNRDAFRKYCLDNPDQFNR 778 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEG 839 +R++I F AA++ FSSF+L+ S+HRL +DP+SR M+SSDG DF++ + + G Sbjct: 779 FEREVIEGFPAAREAHFSSFMLRYGGQVSFHRLLLDPISRVMFSSDGEDFDYREAGLRAG 838 Query: 840 LSIHEAVWQLAWKKSGPEMASLEAWLEEH 868 IH+ + +LAW+K EM +L W++ + Sbjct: 839 KDIHDIIGELAWRKFPQEMETLTEWIKHN 867 >UniRef50_A4WGS7 Type IV secretory pathway VirB4 components-like protein n=5 Tax=Enterobacteriaceae RepID=A4WGS7_ENT38 Length = 866 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 378/870 (43%), Positives = 541/870 (62%), Gaps = 13/870 (1%) Query: 7 AVTQAVNSLVTALKLPDESAKANEVLGEM-SFPQFSRLLPYRDYNQESGLFMNDTTMGFM 65 +V + SLV + K D +A A L + +P LPYR Y+ + LF+N+ + GF+ Sbjct: 2 SVLDNLMSLVNSRKREDGAATARANLEQTWGYPSLVAALPYRYYDDVNELFINEGSAGFI 61 Query: 66 LEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAE 125 LEA P+ GANE ++ ALD MLR KLPR P+ + L++S+ VG+RI G+ W G+ +E Sbjct: 62 LEAAPLPGANEQVIAALDDMLRKKLPRKTPVSVLLLASKCVGERIARGVSSDMWKGDMSE 121 Query: 126 RFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKI 185 N IT+A++ ++A L PL LR+YR+FI Y P+K+ S+ + ++ + Sbjct: 122 YLNKITKAFWQRSALKG--LANEREYPLYLRNYRIFIVYGKPAKRFSQQVMDDLVQVRNT 179 Query: 186 IRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLK 245 IR SL A I T +F+ ++ EM+N+ + + + LN Q VE D++ Sbjct: 180 IRVSLGAARIETINTHVNSFLSVMREMMNYRQEQVMTSSGDYNEDEKLNRQIVEPGIDVR 239 Query: 246 VRADYLTLGLRENGRN-------STARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 V+ Y+ + L + S R++N LA++P+ LW ADN NL P+L I Sbjct: 240 VKPSYIRVELPDRIEENGTRLPASACRVVNMQLAKSPKRFALWQGADNLQNLRFPDLGIP 299 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 CPF+L+ T +E+Q T +EA K MDL KK+ ++Y + FPS +++A+EW R++L + Sbjct: 300 CPFMLSWTTELEEQTATQNEALRKDMDLSKKANSAYGQLFPSTKRQAEEWRRNREQLSNN 359 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + +LN+T F DNN A E +N FRKN E+++ ++ MRN+L C PFM Sbjct: 360 EIAFCRTYLNLTLFTPDNNTDAQACELAAVNVFRKNDLEMVTVQYQQMRNWLGCFPFMMQ 419 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNT 478 +G+++ LK G R +S+N NLMP+VA+ L+ G+ PTYRNQ+AF D+F +T Sbjct: 420 EGMWEDLKMTGATLRCKSWNAVNLMPVVAERQLSHVGMPLPTYRNQVAFFDMFGEENGST 479 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF 538 N+N+AV GTSGAGKT LIQ ++R VL++GGFA V DMGDGYK+ C GGVYLDG LRF Sbjct: 480 NFNIAVTGTSGAGKTFLIQGILRDVLNAGGFAWVIDMGDGYKNYCHQAGGVYLDGAKLRF 539 Query: 539 NPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD 598 NPFAN+ DI+QSAE + L+V+ASP LD V E +L +AV +W K++ ARIDDV + Sbjct: 540 NPFANVKDINQSAEGIVRLLTVLASPTEPLDGVCEAILQKAVMTAWEKKQHGARIDDVHN 599 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 +L + + +E +A+ PTI SRL E+ +LLD Y G G+YFN+D P+L + + VLEL Sbjct: 600 YLTDPAVNEAFADKPTIISRLAELAMLLDTYCTWGPDGEYFNADSPTLDGETRFAVLELL 659 Query: 659 GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR 718 LED+P LL +++FSLI+ I+ +MY +PR+LKK+ +IDE WRLL N FIE GYR Sbjct: 660 SLEDKPKLLSSILFSLILAIQEKMYHSPRDLKKVCIIDEAWRLLGGSNPHAARFIETGYR 719 Query: 719 TARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL 778 T RRH GA+ITITQ I DF AS A AAW NSS KI L Q + F +Y PDQF Sbjct: 720 TVRRHRGAFITITQGIKDF---SASKEAEAAWNNSSTKITLLQDTRAFKQYLADNPDQFS 776 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 +++++I F A +SS L+ SS+HRLFVDP++RAM+SS G DF F+Q ++ Sbjct: 777 DMEKEVIRGFQPALLTGYSSLLVSAGEFSSFHRLFVDPITRAMFSSRGEDFAFMQDAQRA 836 Query: 839 GLSIHEAVWQLAWKKSGPEMASLEAWLEEH 868 G + EA + LA KK GPE+ LE W++ Sbjct: 837 GSTAEEAAYLLAQKKFGPELQELEEWIKAA 866 >UniRef50_D2TZZ8 Conjugal transfer ATP-binding protein TraC n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ8_9ENTR Length = 848 Score = 620 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 368/850 (43%), Positives = 554/850 (65%), Gaps = 10/850 (1%) Query: 17 TALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANE 76 AL D + + + L M +P LLPYRDY+ + LF+N ++GF+LEA P+ GANE Sbjct: 3 NALMEKDTTRETAKKLESMDYPHLRDLLPYRDYDGDHQLFINQNSLGFLLEAQPLIGANE 62 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 +VE+L+ +++ LPR IPL + L+SSQ V +++ GLR+FSW G +A+ N IT+ +Y+ Sbjct: 63 KLVESLEELVKNNLPRDIPLQVILLSSQTVYEKLTTGLRDFSWQGNRADECNQITQGFYL 122 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT 196 AA QF P+ NLPLTLR Y +F ++C P K+ + ++I+++ + + + ++L + I Sbjct: 123 DAARHQFANPQ--NLPLTLRDYHLFFAFCQPCKRITESEIIKVREIRRNLLSALSASDIH 180 Query: 197 TQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL-GL 255 + F+ ++ EMIN + + L P Q D+N Q V+++ + Y+ + G Sbjct: 181 AENASITRFLQMMREMINPDTERLKPYSAQWTEDKDINQQIVQNNTCYWFKPGYVEITGR 240 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 E + ++R ++F+L NP +LW + SNLLNP+ I CPF+++ + EDQ ++ Sbjct: 241 NEEDKPFSSRAIHFNLDSNPRAHYLWQNGNIISNLLNPQNGIRCPFVMSFIIQTEDQSRS 300 Query: 316 HSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 EAN ++DLE+K +SYAK+ PS +++ EW LR+ L S +S+ Y+L +T FC+D Sbjct: 301 QGEANKNFLDLERKVSSSYAKYIPSTKRQHAEWKSLREGLLSTATSLSGYYLGVTLFCRD 360 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPF--MAGKGLFKQLKEAGVVQR 433 + E A + + +F G ++ MRNFL LPF L+K + G +QR Sbjct: 361 DEEEAAKEAERTKKAFSMQGLNMVRADLMQMRNFLGHLPFAVGDNPKLWKDFLKTGAIQR 420 Query: 434 AESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 AESF NL+P++ADN L+ AG++ P+YR+QLAF+DIF + NTN+N GTSGAGK+ Sbjct: 421 AESFQAVNLLPIIADNKLSQAGIVFPSYRHQLAFLDIFDASLPNTNFNWFESGTSGAGKS 480 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAER 553 L Q + R VLDSGG+ +FD+GD YK+ C+++GG Y++GETLRFNPFANITDI SAER Sbjct: 481 VLAQTIARQVLDSGGYLSIFDIGDSYKAFCQSVGGTYINGETLRFNPFANITDITLSAER 540 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 +RDQL ++ASPNG +DEVHE L+L+A+ SW K+ RIDDVV++LK + E+ Sbjct: 541 IRDQLCILASPNGLMDEVHESLILEAITESWPNKKQDMRIDDVVNYLKKH--RGKIQEAS 598 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 I R+DE++VLL++YT G YG+YFNS EP+L+ D + VV ELGGL+ LL+AV+F+ Sbjct: 599 RITGRIDEILVLLNKYTTKGIYGRYFNSSEPTLKPDMRFVVTELGGLKANRDLLMAVLFT 658 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 L+++ EN MY TPR+L+K+N+IDEGW+LLD K+ KV +FIE+GYRTARRH G++ T+TQ+ Sbjct: 659 LMLWAENLMYNTPRSLRKMNIIDEGWKLLDAKSPKVRDFIEEGYRTARRHNGSFGTVTQS 718 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 I D S+AA AA+ NSS+K L Q AK F + + P F ++ +I KF A Sbjct: 719 IRD---KNLSTAALAAYDNSSFKFTLMQDAKAFNSFQKEEPSTFNEMEWALIQKFPPASR 775 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 FS+ L V +SS+HRL +DPLS ++SS G DF + +++ KEG +I++ ++++A +K Sbjct: 776 AGFSAVHLSVGGYSSFHRLMLDPLSNELFSSRGDDFTYREKRLKEGANINDIIFEMAQQK 835 Query: 854 SGPEMASLEA 863 +A L+ Sbjct: 836 DPALLAKLKQ 845 >UniRef50_A1WDF4 Putative uncharacterized protein n=3 Tax=Burkholderiales RepID=A1WDF4_ACISJ Length = 874 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 202/863 (23%), Positives = 365/863 (42%), Gaps = 36/863 (4%) Query: 11 AVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIP 70 + + P A ANEV S +L Y Y+ ++GLF ND ++ F E I Sbjct: 21 VLGNTSDVGSQPAPVAAANEV---TSLYGLHSILKYDQYDPDTGLFYNDNSVAFCFEVIA 77 Query: 71 INGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREF--SWSGEQAERFN 128 GA++ + L+ + T +P + L S ++ D+ + + + + + F Sbjct: 78 QTGADDDMASRLNTLF-TLVPPHYGIQWCLFGSPVLDDQFQAYMDQRHIAVDNGKTTPFF 136 Query: 129 AITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRA 188 ++ P N +++ R+ S + + EM L + +RA Sbjct: 137 QELAKRRVEYIYKAKGKPLWPNDNYVVKNIRLLFSITKAGSFRDAKLVEEMYELRETVRA 196 Query: 189 SLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQ--LDPYSDLNYQCVEDSFDLKV 246 SL+ AS+ + +DA I + ++N D + Q ++V Sbjct: 197 SLRTASLPSFPLDADGLISFLWPILNPESMFSKEPFPDLRYDDGKSIKNQVTAFGQHVRV 256 Query: 247 RADYLTLGLR---ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFIL 303 +A+ L GL + + + F + + P+ LW MA+ + + L CPF++ Sbjct: 257 KANELLFGLPPEKQGDEDKRIAVRGFGVLQYPQKKELWEMANIIGSFFDDGLQYPCPFLV 316 Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 + D +A +K ++ +K+ A++ P ++ +A +W + +L +G S+ Sbjct: 317 CGGVFTLDPNVVDGKAQIKAARTKQNAKSKMAEFQPELQAQANDWDIVLHQLNNGG-SMC 375 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + + F Q LN +R F + + + + LP + + Sbjct: 376 ELYHTLLLFAP--KRVINRASQVALNVWRSERFTICPLQLLQLTALYSSLPMTLTETVRD 433 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 L++ ++ + N ++ P++ + ++ R F+D + NYN+ Sbjct: 434 DLQKLRLITSKTTVNAVDMAPVIGEWKGAGDPVMMFFGRRGTPTFLDFYSNQQG--NYNV 491 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFN 539 V G SG+GK+ + ++ + G V D+G Y++L G +L+ L N Sbjct: 492 FVAGVSGSGKSVTMNEVVSAYRGIGARVWVIDVGRSYQNLIRLQKGTFLEFTPSTKLCIN 551 Query: 540 PFANITDIDQ-----SAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID 594 PF + D+ ++ + MASPN L E L+ +A+ A W Sbjct: 552 PFTWVGTDDELDFKAEMRMLKPMIGRMASPNAPLTEFQYALIGEAITAVWQDYGQDTNPT 611 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 + D+L + +E + E+ L +T +G YG +FN ++ DA MV Sbjct: 612 RIRDYLLSNIKNESGSTERV----AYELAKQLAPFTKDGVYGDFFNGRA-NISLDADMVG 666 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 LEL L++ P L V+F L I + MY T R+ KKL ++DE W+LL + + EFIE Sbjct: 667 LELEELKNAPELRRVVLFVLTSRIAHDMYLT-RDRKKLCLVDEAWQLLG-ADKETAEFIE 724 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 +GYR AR++ G + TQ I D + AA+AA+ N+ +KI+L+Q K K + Sbjct: 725 EGYRRARKYNGIFCVGTQGIEDAYKN---DAAQAAYNNADWKILLRQDRKNLEKLIEDGM 781 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQ 834 F P + M+ + + FS L+ N S R DP S M S++ DF Sbjct: 782 VNFSPAVKRMLLSLRTERGR-FSEMLISSPNGDSVVRHIPDPFSLLMASTNAQDFNECNA 840 Query: 835 KRKEGLSIHEAVWQLAWKKSGPE 857 ++G S EA+ + +++ E Sbjct: 841 LLEQGHSTMEALEIMLARRAPQE 863 >UniRef50_A0B4N6 Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4N6_BURCH Length = 864 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 201/866 (23%), Positives = 362/866 (41%), Gaps = 40/866 (4%) Query: 7 AVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFML 66 A+++A+ L P A + + LLPY Y+ + L+ N ++GF+L Sbjct: 18 AISEAILGTEDDLGPPAPVAADQRRVETVG---LHNLLPYDQYDPATELYYNTDSVGFVL 74 Query: 67 EAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGL---REFSWSGEQ 123 P GA+ + +L L +P G L L+ ++ + + + RE++ +G Sbjct: 75 AVAPQTGADAELTRSLHG-LYDSVPAGYGLQWMLLGDPIIEESLNAYVDLRREYAEAGRA 133 Query: 124 AERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLV 183 + + P + ++ R+ +S I E++N+ Sbjct: 134 PSFYLEQAERRAAF-IRGKLGQPLFLGQNYSITDKRLLLSIVRKGSLDDLKLIEEIQNIR 192 Query: 184 KIIRASLQGASITTQTVDAQAFIDIVGEMINHNP---DSLYPKRRQLDPYSDLNYQCVED 240 ++ A+L AS+ ++T + + ++N + D + + Q Sbjct: 193 DVVGATLSSASLASRTAEPDDLKRFLWPILNPSAFFGDGAETIDQTYSDDKPIRDQLTAF 252 Query: 241 SFDLKVRADYLTLGLRENGRNS---TARILNFHLARNPEIAFLWNMADNYSNLLNPELSI 297 ++V+A +L G+ + + +F + + P+ LW M + +L N Sbjct: 253 GHHMRVKAKHLLYGVPPEDADEPDARIAVRSFGVHQYPKSKELWEMNNIVGSLFNDVHQY 312 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 CP+++TL +++ DQ + A L+ + +++ AK P + + ++W + +L Sbjct: 313 PCPYLITLGVLILDQTAVETRAALRGARATQNAESKIAKLQPELALQNQDWKAVSMQLTQ 372 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 G S+ + +T F + + +R F+L + FL+ LP M Sbjct: 373 GG-SMCELYHTLTLFAP--RKKMEQCVAAAKGIWRSERFKLFPMLTQQLTTFLSALPMML 429 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL--TPAGLLAPTYRNQLAFIDIFFRGM 475 + LK+ ++ + N ++ P++ + A LL R A +DI+ G Sbjct: 430 TSDMRDDLKKFRLITTKTTVNATDMAPVLGEWSGTSGRANLLFFGRRGTPALVDIYSSG- 488 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--- 532 TNYN V GTSGAGK+ L+ +I + GG + D+G Y+ + G Y+D Sbjct: 489 --TNYNGFVDGTSGAGKSVLLNEIIGAFRSVGGIVRICDVGYSYEKQIDMGDGQYIDFKP 546 Query: 533 GETLRFNPF-----ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 G + N F +D + +R ++ M SP + LL AVR W Sbjct: 547 GSRIIINAFSTAGIDTENGLDSEVKFIRPIIARMVSPTAPITPFEGALLDVAVRIVWKDY 606 Query: 588 ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 V D L + D E E+ V L+ + G YG Y N ++ Sbjct: 607 GQEGSPTLVRDALLSLKDQNGQPE-----RIAYELAVRLEPFCKGGVYGDYVNGR-TNVS 660 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH 707 D ++V LEL L P L +M L + N MYR R+ KL + DEGW+++ + Sbjct: 661 LDNEVVGLELEHLNSDPQLRTVIMLGLTNQVTNEMYRFDRSRPKLFLQDEGWQIVG-DDQ 719 Query: 708 KVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFA 767 + +F+E+GYR AR++ G++ TQ I D +KA+ AA + NS++K LKQS Sbjct: 720 ESADFMEEGYRRARKYEGSFFFATQGITDAGMNKATQAA---FDNSAWKFHLKQSDDTLK 776 Query: 768 KYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGP 827 K + P + M+ ++ L+ + R D + AM ++ GP Sbjct: 777 KIEKGDVMDLSPGLKRMLKSLRPVPGRYSEFVLVDPNGGTHLLRHIPDEFTLAMATTKGP 836 Query: 828 DFEFVQQKRKEGLSIHEAVWQLAWKK 853 D+EF+++ R G S +A+ L K Sbjct: 837 DYEFMERLRTSGTSTEDAIRALIQAK 862 >UniRef50_D1RMN8 Type-IV secretion system protein TraC n=2 Tax=Legionella RepID=D1RMN8_LEGLO Length = 858 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 261/847 (30%), Positives = 412/847 (48%), Gaps = 21/847 (2%) Query: 13 NSLVTALKLPDESAKANEV-LGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPI 71 NS+ L +ES+ N + +G+ +P F + LPY+ Y++ES LF+N G + P+ Sbjct: 14 NSIDDYLVDGEESSSQNTLNVGDHQYPLFCKELPYQYYDEESHLFINRWNTGLLYRITPL 73 Query: 72 NGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSG-EQAERFNAI 130 GANE I E LD +LRTK+ L + L+ VG ++ ++F EQ Sbjct: 74 TGANEKIAEQLDSILRTKVSDEFTLQLILVKHNQVGHELDAFSKQFMNRDFEQLSVMGKS 133 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILE-MENLVKIIRAS 189 R++Y +AA F +N +T V + K K+ ++ AS Sbjct: 134 LRSFYGEAAVHGFKTNTNVNPRITQTECYVVVD---KIKGKNEEEVKACFAQFRIAFEAS 190 Query: 190 LQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 L A I +T +A+ + ++ + H PD++YPK DP + +Q V FD++V + Sbjct: 191 LMSAKIGFRTCNAEELLRLLHFYLAHEPDNIYPKISCYDPKKLIQHQVVGRDFDVEVAKE 250 Query: 250 YLTL-GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLV 308 L G+ G+ + P LW+ +N +N+ NPE SI C I+++T + Sbjct: 251 GLLFKGVNSQGKAFETVASVMTIDGLPGEYHLWDNINNSANIFNPEQSIPCNHIISVTYL 310 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 V++Q K AN K DL+KK+K YA EK+A+EW R L SG++ N Sbjct: 311 VDEQNKAQGRANRKTSDLDKKAKGDYALHVAGTEKKAREWRHFRDDLASGKTRSCKMLYN 370 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 + F + + F NG +L R FL LPF+ L K + Sbjct: 371 VVLFSRRA--EYARDVEAARTCFSYNGIKLALSRRMQTPYFLATLPFLFTNHLQKGFQLP 428 Query: 429 GVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 ++ S+N MPL++D T +G+L PT RNQ + ID F + TNYN++V GTS Sbjct: 429 TMMWPISSWNATQYMPLLSDWSGTGSGILLPTLRNQFSCIDPFSGKLG-TNYNISVTGTS 487 Query: 489 GAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDID 548 G GK+ IQ L+ +VL +GG + D+G YK LC +GGVYL+ L NPF ++T+I Sbjct: 488 GGGKSFFIQMLMLNVLFNGGDLFIVDVGGSYKKLCHALGGVYLEYSNLAMNPFTHLTNIG 547 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQ 608 + + + ++A + G L +A+ ++ + ID V L Sbjct: 548 KEIQHILSLFQLLACAKDGASDDDRGTLREAILQAFSEHQQTTLIDHVQSKLLEL----- 602 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 + + LD Y + +G FN+ L DA+++V++L +ED + Sbjct: 603 HQNDREKYPTGKILAKNLDPYCTHSEHGTVFNAPS-KLAPDARIIVVDLKEIEDDEHIRA 661 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 V+ S++ + RM+ + R+ +K+ +IDE W L + FI +G+RT RRH +++ Sbjct: 662 PVLLSILSQFQGRMFNSDRSRQKMCIIDEAWSLFS-GDQIAVNFINRGFRTGRRHNASFV 720 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 TITQ I D+ A ARAAW NS+ K+I Q AK+ Q + F + ++ F Sbjct: 721 TITQGIDDYY---AFPEARAAWENSAIKLIFLQDGDSLAKHQQE-HNTFSDFEFKLLSGF 776 Query: 789 GAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQ 848 AKD FS L++ + SS+HRLFVDP ++ + SSDG D++ V ++G S A Sbjct: 777 PKAKDAGFSQVLVRADGISSFHRLFVDPFTKVLLSSDGRDYQAVMNYIEQGYSYIHAAML 836 Query: 849 LAWKKSG 855 +A K Sbjct: 837 VANKHYD 843 >UniRef50_Q0F363 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F363_9PROT Length = 792 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 195/797 (24%), Positives = 337/797 (42%), Gaps = 43/797 (5%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPR 92 P+FS LPY + ++ N+ + GF++E +P GA+ + L +L P Sbjct: 17 ASHQAPRFSHWLPYLAADAADCVYENENSHGFVMECMPQVGADMEMARILTSLLTLGWPP 76 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAA---TQFPLPEGM 149 + +H+ +S + + ++R + I R + + Sbjct: 77 DTGIQVHMYASPNIRSMLAGWASIRISETSDSQRASGIYRTLARRRVEYILSGARASLFN 136 Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV 209 + P +R +RVF+S P + S + + L + +A L GA + + A I + Sbjct: 137 SAPYLIRDFRVFVSVTLPG-RMSEENRARLIELRRGAKAVLAGAHLPAWDMSPSALITWL 195 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 EM+N Y + DP + Q + L V+ D++ + N + Sbjct: 196 AEMLNQED---YDRDIAYDPGRLIRNQILNYGTTLDVKPDHILI-------NGRTEVRMM 245 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 + PE LW M+ + L CPF+ TL + + D + A +K Sbjct: 246 SVKNYPEEFPLWGMSGLVGDFYQANLQYPCPFLFTLGVHLPDLESAKAGAQMKAARATHD 305 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 ++T AK+ P + ++W + L G S+V + + F ++ EQ Sbjct: 306 AETPMAKFLPDFALKKRDWDIVMHALAEGH-SMVQLYHQLVLFAPRG--RGVQAEQAARA 362 Query: 390 SFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN 449 R +E RF + L LP K ++ +K + N ++ PL+AD Sbjct: 363 VLRGKSWESCLDRFMQTQGLLAALPMTLSKEMWSDIKRMERYSTKTTGNAMHMAPLLADW 422 Query: 450 PLTPAGLL-APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 T L + R Q+ D+F NYN+AV SG+ K+ L+ + S L GG Sbjct: 423 KGTGTPTLMLYSRRGQVMHFDLFDNKEG--NYNVAVAAASGSEKSFLLNEITLSYLGIGG 480 Query: 509 FAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPN 565 + D+G Y+ LC + G +++ + NPF ++ D+D+ ++ L+ MA+ + Sbjct: 481 RVWIIDVGRSYEKLCRLLEGEFIEFAPDSNICINPFTHVRDLDEEMALLKPLLARMAAAS 540 Query: 566 GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVL 625 D++ +L +A+R SW ++ N + DV D+L D R ++ + Sbjct: 541 RETDDLENAMLEEAIRRSWESRGNTMTVTDVADWLAAQDD-----------DRARDLARM 589 Query: 626 LDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT 685 L YTA G Y +YF L D + VVLEL L+ + L V+ ++ I+ MY Sbjct: 590 LLPYTARGMYARYFEGRNT-LDFDNRFVVLELEELKAKKDLQAVVLMIVMYQIQQAMYLG 648 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 R +K+ +IDE W L+ GEFIE GYR R++ GA+IT TQ+I D+ AS A Sbjct: 649 ERGQRKICIIDEAWDLMS----GAGEFIETGYRRVRKYGGAFITATQSIGDYYKYDASLA 704 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 A + NS + ++L+Q + + + + + M+ + + FS + Sbjct: 705 A---FENSDWLLLLRQKKESVEQLTESGRLKVDDSMKRMLMSLKTSHGE-FSEVFIYSAA 760 Query: 806 HSSWHRLFVDPLSRAMY 822 RL VDP S + Sbjct: 761 GMGIGRLVVDPYSTLLV 777 >UniRef50_C5ANL2 Putative uncharacterized protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANL2_BURGB Length = 866 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 202/857 (23%), Positives = 360/857 (42%), Gaps = 42/857 (4%) Query: 17 TALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANE 76 L P + + + Q LPY Y+ + L+ N +++GF+L P GAN+ Sbjct: 28 DDLGPPAPTVADQRRVDNVGLHQL---LPYDQYDPATELYYNTSSIGFVLVVAPQTGAND 84 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGL---REFSWSGEQAERFNAITRA 133 + L L +P + +++ ++ + ++ + R ++ SGE + Sbjct: 85 ELARTLLG-LYDTMPADHGVQWMMLADPIIEEHLDRYVDLRRTYANSGEAPPFYLEQAER 143 Query: 134 YYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGA 193 A Q P ++ R+ +S EM+NL +++ A+L+ A Sbjct: 144 RAAALRANQ-GRPLFHGQNYSITDKRLMLSVVRKGSADDAKVREEMQNLREVVGATLRSA 202 Query: 194 SITTQTVDAQAFIDIVGEMINHNP---DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 S+ ++T I + ++N + +Q D + Q V +V+A++ Sbjct: 203 SLASRTATPDDLIRFLWPILNPEYLFGNGAEVVDQQYDSDRPIRDQLVPFGHHARVKAEH 262 Query: 251 LTLG---LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTL 307 L G + + +F + + P LW M + +L N CP+++TL + Sbjct: 263 LLFGLPPEEKGDPDKRIAARSFGVLQYPSKKELWEMGNIVGSLFNDVHQYPCPYLITLGV 322 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFL 367 + DQ + A L+ + +K+ A P + + ++W + +L SG S+ + Sbjct: 323 MTLDQNAVETRAALRGARAAQNAKSKMAPLQPELALQDRDWRAVGLQLESGG-SICELYH 381 Query: 368 NITAFCK-DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 +T F D E + + I +R F+L + L+ +P L L Sbjct: 382 TLTLFAPRDGIERCVAAARGI---WRSERFKLFPMVTQQLTTLLSAMPMALTPDLRDDLN 438 Query: 427 EAGVVQRAESFNVANLMPLVADNPLTP--AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 + ++ + N ++ P+VA+ T LL R A ID++ TNYN V Sbjct: 439 KLRLISTKTTVNATDMAPVVAEWGGTRGAPSLLFYGRRGTPALIDLYSSP---TNYNGFV 495 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPF 541 GT+GAGK+ L+ +I + GG V D+G Y+ GG Y+D + NPF Sbjct: 496 DGTTGAGKSVLMNEIIAAFRSVGGIVRVCDVGYSYEKQISLAGGQYIDFKPNSGIVINPF 555 Query: 542 -----ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDV 596 IDQ + +R ++ M SP +++ LL AVR W V Sbjct: 556 SSAGFDPENGIDQEVKFIRPIIARMVSPTAPIEQFEGALLDLAVRQVWQDYGRDGSPTLV 615 Query: 597 VDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLE 656 L + D + E E+ V L + G YG+Y N ++R D +++ LE Sbjct: 616 SKALLSLKDQNKRPERV-----AYELSVRLGPFCDGGVYGRYVNGP-TNVRLDNEIIGLE 669 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 L L P L ++ L + N MYR R+ KKL + DEGW+++ + + EF+E+G Sbjct: 670 LEHLNSDPDLRTVILLGLTNQVTNEMYRFDRSRKKLFLTDEGWQVVG-DDKETAEFMEEG 728 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 YR AR++ G++ TQ I D K + A +AA+ S++K + Q K + Sbjct: 729 YRRARKYEGSFFFGTQGIGD---TKLNRAIQAAFDFSAWKFHMAQGKDAIPKIEREKSID 785 Query: 777 FLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKR 836 P + M+ ++ L+ R + + AM ++ GPD+ F+Q+ Sbjct: 786 LSPSLKKMLSSLAPYPGRYSEFVLVDPNGDEHLLRHIPEEFTLAMATTKGPDYNFMQRLI 845 Query: 837 KEGLSIHEAVWQLAWKK 853 ++G+S +A+ L K Sbjct: 846 QQGVSTEDAIRSLIEHK 862 >UniRef50_B6ESX9 Conjugative transfer protein TraC n=14 Tax=Vibrionales RepID=B6ESX9_ALISL Length = 843 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 239/862 (27%), Positives = 396/862 (45%), Gaps = 46/862 (5%) Query: 30 EVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTK 89 + + LPYR ++ E LF N T++GF + + GAN+S +EAL+ +L T Sbjct: 7 KKHSKTEHNHLHHQLPYRFFDDEHTLFHNTTSIGFGFQLNVLGGANDSAIEALNKILTT- 65 Query: 90 LPRG--IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE 147 LP+G L S+ V IE S G R R Y A+ + F + Sbjct: 66 LPQGKQWDYQFTLTSNHQVSHLIEQNTALMSKRGGICARLANNERTYADFASTSGFLHRQ 125 Query: 148 GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFID 207 + L H +F+S S DI ++ + + SL +T + I Sbjct: 126 KHHFTLREHHSFLFVSTTSR-------DIDKINDTKATLYTSLTQLGLTLTPIGVPELIS 178 Query: 208 IVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN-GRNSTARI 266 V +N N + P++ + + L+ Q + + V ++ +N T+R+ Sbjct: 179 YVDGHLNFNANKTRPEKATYNEHEPLHTQMLSPDSEFLVSRGHVDSRHTDNKHGEQTSRV 238 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 +NF L R P L+ + + +S+L N SI+CPF ++ +ED K ++ + L Sbjct: 239 INFGLLRLPSDFRLYALPECFSSLKNVAQSINCPFTCSVQFQIEDNGKATADNDGHISAL 298 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 K + P+ + E E +++ L S + ++VS +N++ F + E + Q Sbjct: 299 MKTVGSKMQVLVPTAKDELAERKQIQLGLLSKEFTMVSMVMNLSLFS--SKEKQRDDSQA 356 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 +++F G ++ +L+ LPFM +G +K K AG ++ +S N N P++ Sbjct: 357 AVSAFSSGGIDIAPLNMLQGHAYLSSLPFMMSEGFWKDSKRAGRIRTMKSSNAVNFFPII 416 Query: 447 ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 DN G+L PT R Q++F D F + NYN+A+ G SGAGK+ +Q L +SV Sbjct: 417 HDNKNFSGGMLLPTMRQQISFFDPFNC--GSDNYNIALTGGSGAGKSFFVQLLAKSVYSK 474 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAER------------- 553 G + D G YK L + G Y+ + + NPF ++ I +E Sbjct: 475 FGKVWILDKGASYKKLTLMLEGTYMTSKEIFLNPFTHLGKIKAKSEHEASVDDELNPLAE 534 Query: 554 ----VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQY 609 + + MASP LD +L A+ +W K R+DDV L S Sbjct: 535 VLDNITALFATMASPREELDPFQTAVLGDAILNAWNDKGPLTRVDDVQAALFAISTESDN 594 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 R+ ++ L++Y +N YG FN L + + LEL G ++L Sbjct: 595 ------DRRISDIATQLNKYCSNNVYGDTFNKPS-MLNPNIHITTLELDGFP--EAVLRP 645 Query: 670 VMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 +F+L++ I +MY T R+ KL +I+E W LL N + EFI GYRTAR+ G++ Sbjct: 646 AIFALMVSINQQMYLTGSRSTPKLCIIEEAWSLLSGANAQAREFINTGYRTARKFGGSFC 705 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 T+TQ I DF ++ + A A + NS I L+Q + F + Q PD F P ++ ++ F Sbjct: 706 TVTQGITDFFAN---AEAMACYNNSDIHITLRQ-GEGFTSFLQDNPDTFSPYEQQVVKGF 761 Query: 789 GAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQ 848 + +S +++ H+S+HRLF DP +RA S++ +FEF + G + +A+ Q Sbjct: 762 EKSGVAGYSCAMIKAGGHASFHRLFTDPFTRACLSTEPNEFEFCETLMSNGTELMDAIEQ 821 Query: 849 LAWKKSGPEMASLEAWLEEHEK 870 A G EM +A L+ ++ Sbjct: 822 TAEHFYGDEMQKFDAMLQGAKQ 843 >UniRef50_A4XE86 Type IV secretion/conjugal transfer ATPase, VirB4 family n=10 Tax=Sphingomonadales RepID=A4XE86_NOVAD Length = 868 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 197/863 (22%), Positives = 353/863 (40%), Gaps = 61/863 (7%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIV 79 L ESA + P S LPYR Y+++ GLF+N ++GF+LE P+ GA+E Sbjct: 13 MLFGESAHPEAERPVLGAPMLSNWLPYRSYDKKHGLFINTDSLGFILELAPMMGADERSG 72 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAA 139 E L L +P G + + S VG+RI + + R A+ RA +++ A Sbjct: 73 ELLTQFLSDAVPSGCEIQLIHWQSPSVGERIADWVMPRVVAKGVYGR-AAMHRARWLRRA 131 Query: 140 ATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQT 199 A + + P LR+ RV +S + AD + ++ + +LQ SI + Sbjct: 132 AW---MSISRDAPFYLRNTRVILSVGARLSGPIGADT--LASVRDSLHGTLQSLSIPARD 186 Query: 200 VDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENG 259 + I + + + D+ +N QCV + +V D + L Sbjct: 187 MGPVELIAFLDDFLCPAVDNADKPEH-YSELDPINVQCVRRDLETQVTPDRIVLQTERFR 245 Query: 260 RNSTAR---------------ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 + F + P+ W++ +++N +L C + Sbjct: 246 PTGERQDGAPVIGEVVPDKFDWRFFSVRNLPKQWAPWDVQKIIGDVINDKLRFGCNVMTV 305 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVS 364 L LV +D+ S A LK M + + A++ P + ++ EW ++ + G+ + Sbjct: 306 LGLVYQDEEAVASRAGLKVMRTTSLADSRSARFLPQLSEQRDEWQYVQAEIRQGR-KLAQ 364 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 + + A E+ + + ++ G++LI R+ + L +P GL Sbjct: 365 VYYGVGALSP--LGKGDINERMVKSVYKACGWDLIDERYLQVMGLLAAMPLSLPNGLSAD 422 Query: 425 LKEAGVVQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMA 483 LK + + A++ PL + +L R Q F F N+N+A Sbjct: 423 LKRMKRFKTMLTTTAASIAPLQGEHTGGHIPHVLLIGRRGQPFFWSPFQNAAG--NHNVA 480 Query: 484 VCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNP 540 V G SG+GK+ +Q + ++ +G +V D G ++ + + GG +++ NP Sbjct: 481 VFGKSGSGKSVFLQDVCAAMSGAGAKVIVIDDGRSFEHMVKAFGGAFVEFKLSSGFSLNP 540 Query: 541 FANITDI----DQSAE--------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 F I D+ E ++ + MA L + GL+ AV W K+ Sbjct: 541 FDMIDGEALASDEDGEDYEVECLAMLKSIVGQMARQQDRLSDTERGLIDSAVSTVWREKQ 600 Query: 589 NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD 648 IDDV L+ ++ + + GTYG++F S+ Sbjct: 601 RHGTIDDVAAALRALP-----------SPYAGDLADAMSPFLKGGTYGRFFEG-ACSIDL 648 Query: 649 DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 A + V EL L +P L + +L+ M R++ KL +IDE W+LL + Sbjct: 649 SAGLTVFELSDLSSKPELRSVALTALMFLTLRVMRDLDRSVPKLTMIDEAWQLLGG--GQ 706 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 +G+ IE RT R++ G+ IT TQ++ DF + S AA NS + I+L+Q + Sbjct: 707 MGQAIETYARTCRKYGGSLITATQSLNDFYKSEGSLAA---LENSDWSIVLQQKEETIND 763 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 + + ++ +S L++ + RL +DP S +YSS Sbjct: 764 LAKHQRFEMDHYTESLLRSL-KRNGTEYSDVLIKGPETLAVGRLVLDPYSATLYSSSPRV 822 Query: 829 FEFVQQKRKEGLSIHEAVWQLAW 851 F ++ K + GL++ +A+ ++A+ Sbjct: 823 FSEIEDKVRGGLALPDAIERVAF 845 >UniRef50_D0SGY4 Type IV secretory pathway protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY4_ACIJO Length = 869 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 207/860 (24%), Positives = 367/860 (42%), Gaps = 42/860 (4%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIV 79 K P +N++L Q + Y ++ E+GLF N+ T+GF E IP GAN+ +V Sbjct: 26 KRPSPVKLSNKILESYGMHQ---VFKYDMFDPETGLFFNEGTIGFCFEVIPQTGANDEMV 82 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYG--LREFSWSGEQAERFNAITRAYYMK 137 L M T +P + I + + I+ +R+ + + F + Sbjct: 83 NRLLTMF-TPIPADTGIQIQTFGNTVFDGMIDRYYQIRQAAQEQGDIDSFGIDLAKKRIA 141 Query: 138 AAATQFPLPE-GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT 196 + P G +++ + IS +++ +I M NL + SL+ A + Sbjct: 142 YFERKIGEPLYGSQSNYSIKKPTMVISVTREGNLENQKEIDLMTNLRHSMLNSLKQAELA 201 Query: 197 TQTVDAQAFIDIVGEMINHNP--DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 +DA A I + ++N + + D + Q + +VR + G Sbjct: 202 AFHMDAHALITHLTIILNPEILFSNERLPIIEYDENKRVKEQITKIGHMAEVRRKSVVFG 261 Query: 255 L--RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 +N ++ + ++ + R P+ LW M++ + + L CP+I+T + D Sbjct: 262 AVPEKNEKDERVAMRSYGVMRYPKRKQLWEMSEVVGAMFDDSLQYPCPYIITCGIYTLDA 321 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 +T + A +K+ ++ S++S AK+ P + ++W + S ++ + IT Sbjct: 322 NQTETMARVKHARAKQNSQSSMAKFQPEYGEIEQDWESVVFH-TSNGGAMCEMYHIITLI 380 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 + Q +N + N F +I+ F + P K LK+ V+ Sbjct: 381 AP--VDKIDSYSQTAINIWSSNKFNIIALDFLQLAALYVSCPMTLNKSTRDDLKKLKVMT 438 Query: 433 RAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 + N ++ PL+ + ++ + FID + NYN+ VCG SGAG Sbjct: 439 TKTTINAIDMSPLIGEWQGVGDPVVMLFGRKGTPCFIDFYANTDG--NYNLYVCGVSGAG 496 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDID 548 K+ L+ ++ + G + D+G +K+ + G D G +L NP++ I + Sbjct: 497 KSVLLLEILAAYRAVGAKLFILDVGRSFKNFVDLAKGTTFDFNSGRSLCMNPWSWIQVAE 556 Query: 549 QSAE-----------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 + E + + MASP +L++ E LL +A+ A+W N +D+V Sbjct: 557 EEEEGGLNTFQQELRMLLPIYAKMASPKNSLNQFQEALLEEALSATWREYGNENNVDNVQ 616 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 +L D + E+ L +T NG YG YFN + ++ D ++ LEL Sbjct: 617 AYLLQIKDQGG----QQVDRVAFELGKQLQAFTTNGMYGSYFNG-KANISFDNDVIYLEL 671 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 L+D P+L VMF + I MY T R+ KKL IDE W+LL + + +FIE+GY Sbjct: 672 EELKDAPALRSVVMFCVTSRIMKEMYLT-RDRKKLCFIDEAWQLLG-DDAETAKFIEEGY 729 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 R AR++ G + TQ I D ++AS RAA+ N+ +KI L+Q K F + F Sbjct: 730 RRARKYNGIFGIGTQGIDDAFKNEAS---RAAYTNADWKIFLRQDEKNFQELIDSKKVSF 786 Query: 778 LPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRK 837 P + +I ++ ++ R D S AM S++ D+ + K Sbjct: 787 SPYMQRLIKSLRKING-MYAEMIISSPRGEHLLRHIPDEFSLAMASTNAKDYTRLDNLMK 845 Query: 838 EGLSIHEAVWQLAWKKSGPE 857 G + +A+ QL +K + Sbjct: 846 GGYTTIQAIEQLLKEKEQEK 865 >UniRef50_Q1N8Z9 ATPase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z9_9SPHN Length = 862 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 181/887 (20%), Positives = 354/887 (39%), Gaps = 60/887 (6%) Query: 5 LEAVTQAVNSLVTALK-LPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMG 63 + + Q S L L A+ L +FS LPYR Y++++ LF ND ++G Sbjct: 1 MNRLAQLRRSTEKLLFNLFGGEELASVSLPMPDVEKFSGYLPYRSYDRDTELFYNDASVG 60 Query: 64 FMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQ 123 F+LE P+ GA+E + +L+ + L G + +S + ++ +G+ Sbjct: 61 FVLEIAPLTGADERVHTSLNQIFSDILMPGCDFHVVSYASPRISKVVQEWCYPRYLAGDV 120 Query: 124 AERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLV 183 + + + A + P R++R S + ++ + Sbjct: 121 FAKIANYRAGHLARGAWKSMA----GDGPFVTRNFRTVFSVSVRQGSRVNK--RDLLTIR 174 Query: 184 KIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFD 243 + + A T+T + E+ + +N QC+ F+ Sbjct: 175 ESLIAHFSAIGTPTRTFTPIELMQFCDELTTPST-GTGDDALHYSDLDPINVQCIRPDFE 233 Query: 244 LKVRADYLTLGLRENGRNSTA----------------RILNFHLARNPEIAFLWNMADNY 287 + + D + + + + PE W+ Sbjct: 234 IAIERDRILTRSQSLRMTGRTLHDGVPELGIFTPSSFDVRALVVKNYPERFAAWDGQQLI 293 Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 ++ NP+L+ CP + V D ++ + A LK++ ++ ++ P + ++A E Sbjct: 294 GSIFNPKLNFGCPVAMVFQGRVLDDTESATRAGLKHVRSKQLAEGKAVSLIPHLSRQAAE 353 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 W + + G +V F NI ++ A E + + ++ G++L ++ Sbjct: 354 WENVASLVRVGH-RLVQGFYNINVISPRDS--AEENLRTVKAVYKAAGWDLSDQLHINIM 410 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLA 466 ++ + P GL L + + + N A P+ + ++ R Q A Sbjct: 411 SYCSMFPMNISSGLGDMLSRMKMQRTMVTTNAAAFAPMHGEFLGGNLPHMMLVGRRGQPA 470 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENM 526 + F N+N A+ G SG+GK+ +Q L S++ SG A++ D G ++ C+ + Sbjct: 471 YWSPFQNNEG--NHNTAIFGKSGSGKSVFLQELCVSLVGSGAHAIIIDDGRSFEHTCKAL 528 Query: 527 GGVYLD---GETLRFNPFANIT------DIDQSAE---RVRDQLSVMASPNGNLDEVHEG 574 GG +++ L NPF I D D + + + MA L + +G Sbjct: 529 GGRFIEFTLSSGLSVNPFRMIDADLAATDEDYHVDCLAMLMSIIGQMARHEQRLSDFEKG 588 Query: 575 LLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGT 634 ++ +AV W + ID V+ L N D ++ L+Q++++GT Sbjct: 589 IIDRAVNQVWNDMGSNGTIDAVITALVNDDDPVG-----------QQIATSLNQFSSSGT 637 Query: 635 YGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV 694 YG++F D + V EL L R L AV+ S++ M ++ R + K Sbjct: 638 YGRFFIGDSI-IDLTNPFTVFELSDLASREDLRSAVLTSIMFLASQYMRKSDRTIPKALF 696 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 IDE W+LL K + +F+E RT R++ G+ IT TQ+I D+ S RAA NS Sbjct: 697 IDEAWQLL--KGGSMAQFVEIYARTCRKYYGSLITATQSINDYYKSDGS---RAALENSD 751 Query: 755 YKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV 814 + ++L Q + + +++ + +I + +S ++ + RL + Sbjct: 752 WSVVLAQKPETIGELSRMGRFELNEFTNALIRSL-KRQGTDYSDVFVRGPDTEFVARLVL 810 Query: 815 DPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASL 861 D S A++SS F ++ ++G+S+ +A+ +A+ ++ + Sbjct: 811 DKFSSALFSSSPKVFAEIEALHRQGMSMADAIETVAFPENAKFGGEI 857 >UniRef50_A3VN21 TraC n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN21_9PROT Length = 857 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 211/865 (24%), Positives = 360/865 (41%), Gaps = 59/865 (6%) Query: 23 DESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEAL 82 E + + V E S + S +LPYR +++E L++N + G++LE +P GA+E++V L Sbjct: 18 GEGSLFDGVRRETSLDRLSEMLPYRLWDEEKALYLNAASTGWILEVVPFLGADETVVSVL 77 Query: 83 DHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 M +P L I +S +G ++ + + R +++ A + Sbjct: 78 AEMFSDGIPDNAYLQILNWASPRIGPVLDSWATARGGEAGVFKTLA-LHRVDHLRRGAFR 136 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA 202 + P R +RVF++ S ++E L + +L+ + ++ V Sbjct: 137 SL---SAHAPFLARQFRVFVALGVEG-DASPEVRHQLEGLRSNVAQALKSLGVASRPVAP 192 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL------- 255 I + E++N ++ DP L+ Q V L+V AD L Sbjct: 193 DGLIRFLDEVLNPQF-AVTRASAGYDPAELLDRQIVRPDTSLRVEADRLLFETIAPADRS 251 Query: 256 ---------RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT 306 E+ R + F + PE MA + LN +L + CP + L Sbjct: 252 PFEAPGTTQLEDYRTGRFDVRAFSARKFPERFDQGGMALAIGHPLNDQLRLPCPVLSCLA 311 Query: 307 LVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYF 366 + + ++ A K+ E+++ T+ ++ P ++ +A +W +R+R+ G V + Sbjct: 312 IAFGSKESSNDLAAAKFGRAEQQAATNMVRFLPELKDKADDWKWVRERVRDGARLVRAGS 371 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 I A E+ + + +R G+EL RF + CLP GL L+ Sbjct: 372 FLIMVAP---EGEAEAAERAVRSLYRGMGWELAKDRFVATQTLGACLPLTLADGLGADLQ 428 Query: 427 EAGVVQRAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 + ++ + + PL + + L+ R Q F F N+N+A+ Sbjct: 429 KLRRLRFMVTDTCVQIAPLQGEYLGMSTPDLMLLGRRGQPFFWSPFGNQGAG-NHNVAII 487 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFA 542 G+SG+GK+ L+Q L+ + +G V D G+ +K +CE +GG ++ + NPF+ Sbjct: 488 GSSGSGKSVLMQELVTGLRGAGTNVTVIDDGESFKHMCEALGGRHVKFTLEADVCLNPFS 547 Query: 543 NITDIDQSAE---------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARI 593 + + + VR + MA GL+ AV W A+ A I Sbjct: 548 LLDERKAKEDGDYATESLTLVRAMIEQMAKGEERATAEERGLIDSAVAEVWKARGILAGI 607 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 DDV LK + L YT G YG +FN + + D + Sbjct: 608 DDVAAALKEQGAEGVK------------LANALRPYTTAGLYGPFFNGEASLV-IDNPLA 654 Query: 654 VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI 713 V E+ LE +P L VM +L+ I RM R K VIDE W LL GEFI Sbjct: 655 VFEMKDLEAKPELRAVVMLALMFLINQRMM-ADRREKMALVIDEAWALLGR--GAAGEFI 711 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 R R++ GA IT TQ I D+ + A+AA+ NS + I+LK + A + Sbjct: 712 AGFARRCRKYGGAIITGTQGIDDYY---RTEGAKAAFENSDWCIVLKLKPEAIALVLKSE 768 Query: 774 PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQ 833 D+I + + +S L+ + RL +DP S ++SSD F ++ Sbjct: 769 RLSIDAHTADIIRSLSVSAGE-YSEMLIMGPHGRHVGRLVLDPFSATLFSSDARTFAEIE 827 Query: 834 QKRKEGLSIHEAVWQLAWKKSGPEM 858 +GL++ EAV ++A++ E+ Sbjct: 828 ALEAQGLTVAEAVERVAFRHQDKEV 852 >UniRef50_B8EFP1 Type-IV secretion system protein TraC n=6 Tax=Shewanella baltica RepID=B8EFP1_SHEB2 Length = 862 Score = 542 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 215/870 (24%), Positives = 380/870 (43%), Gaps = 52/870 (5%) Query: 34 EMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRG 93 + LPYR Y+ +F N T+GF GAN+ +++ ++ ++ T LP G Sbjct: 17 KQQHNHLHHELPYRIYDDAEQVFENANTLGFGFAISLFGGANDDLIKTMNALVCT-LPEG 75 Query: 94 IPL--CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNL 151 ++ + VG+ IE ++F Y ++ F Sbjct: 76 DKWHYQFVMVGNNQVGELIEQNQALLKGRNAICDKFANNEAIYAKHSSTKGFGTKLSSAY 135 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 L++ + F + D+ + ++ + + L + + + A I+ E Sbjct: 136 HYDLKNTKGFFFVS------TTEDMPALLDMRLGVESELAQTGMHIRRLGADDLIEHCRE 189 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL--RENGRNSTARILNF 269 +N + + + Y LN Q + + + D + + ++ + ++N Sbjct: 190 HLNFSHQQDRVTPAKYNEYQPLNTQILSPDSEFIINRDSVNIRHTPMQSDNSVDTTLINL 249 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 L P L+ + ++L S+ CP+ ++++ + + + + K L K Sbjct: 250 GLKGLPNDFRLYAFPNCIASLSYTMNSVQCPYRVSVSFYINKTGEQTTRNDSKIGSLTKT 309 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 + PS E E E+++ L S + + LN+T + E + Sbjct: 310 VNSPMRLLIPSAADELAERKEIQKGLSSHAFKITTMTLNVTLY--TTEEKHRHDTSKAIA 367 Query: 390 SFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN 449 +FR G +LI L+ LPF +G K ++AG+ ++ N+ N +P+VAD Sbjct: 368 TFRTAGIDLIRNNKLQGMCTLSTLPFSMSEGFMKDSQKAGLCFMMKTSNLVNFLPIVADY 427 Query: 450 PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGF 509 AGLL PT R+Q+++ D F + NYNMA+ G SGAGK+ +Q L++S+ GG Sbjct: 428 KRLSAGLLLPTMRHQISYFDPFNC--GSDNYNMAITGGSGAGKSFFMQALVKSIFAKGGK 485 Query: 510 AVVFDMGDGYKSLCENMGGVYLDGETLRFNPFANI-----------------------TD 546 A + D G YK L + +GGVYLD + NPF ++ Sbjct: 486 AWILDKGQSYKKLTQTLGGVYLDSSQIFLNPFTHLGKVLSVRDAGTFGPILDDEGQAIDP 545 Query: 547 IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 I + + ++ MASP+ L LL A+ +W N IDDV L + Sbjct: 546 ITEVLGNITALIATMASPDEKLTGFQTALLGDAILLAWQKCGNDTLIDDVQKALYDI--- 602 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 A +R+ ++ L+++ ++G +G FN L + + LEL G + L Sbjct: 603 ---AAQKNDDTRISDIAAQLNKFCSSGIHGAIFNKPS-MLDPNIDITTLELDGFKG--EL 656 Query: 667 LVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 V+F+L++ I +MY + R++ K+ VI+E W L+ N + +FI +GYRT R+ G Sbjct: 657 QRPVIFALMVTISQQMYLSGQRSIPKICVIEEAWSLMSGANAQSKDFINEGYRTVRKFGG 716 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 ++ T+TQ + DF ++ + AA +S I L+Q F + +PD F P ++ MI Sbjct: 717 SFATVTQGMNDFFANAEAEAALN---SSDIHITLRQGDG-FGDFLNKHPDHFSPFEQHMI 772 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEA 845 F A D S +L+ S+HR+F DP SRAM S++ +FE + K G+ + +A Sbjct: 773 KSFPRANDAGHSCVMLKAGGLVSFHRIFADPWSRAMLSTEPKEFEHCENLIKGGMPLLDA 832 Query: 846 VWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 + A +MA +A L ++ A Sbjct: 833 IELTAQHFYPDDMARFDAILSAAATHKEAA 862 >UniRef50_A8QYQ2 TraC protein n=2 Tax=Legionellaceae RepID=A8QYQ2_9GAMM Length = 865 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 248/872 (28%), Positives = 419/872 (48%), Gaps = 36/872 (4%) Query: 6 EAVTQAVNSLVTALKLPDESAKANEVLGE----MSFPQFSRLLPYRDYNQESGLFMNDTT 61 + + ++ + + + M P LLPY E+G F+N + Sbjct: 13 RHLLHRTSQMLGETSGIKPVSLSAQGQAHESVTMDLPSIKGLLPYET-VNEAGFFVNRNS 71 Query: 62 MGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSG 121 MGF L+ P++GA+ES++ +L + + KL + + + R+ G Sbjct: 72 MGFGLQLSPMSGADESLMNSLAQLFKNKLTVDTDCTVLMYKHPWLEGRLSQNYEPILKQG 131 Query: 122 EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMEN 181 ++ Y++ A + G N+P L Y ++ C P + + ++ Sbjct: 132 GIYADLARLSLKYHLNAIKKGY--KNGRNVPAGLSDYCCYLFICRPMQSDVK---EQLHL 186 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDS 241 L + L+ + + +DA F ++ +I+ + ++L + + S Sbjct: 187 LQADFESELKVSGFGFRRLDADDFKVLMRALISPDFNTL-SWPVINESNGLIAESIPTPS 245 Query: 242 FDLKVRADYLTLGLRE-NGRNSTARILNFHLARNPEI-AFLWNMADNYSNLLNPELSISC 299 +++ + + + + + G R++N ++ P LW D ++NLL+ E I C Sbjct: 246 TVIEIEDEAIEVSIADLKGETQRTRVVNCEVSSYPSKPFALWQTPDLFANLLDTEQGIQC 305 Query: 300 PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQ 359 PF+++ T+ +Q K ++A + L + + PS+ +E EW + G+ Sbjct: 306 PFLISFTIRGVNQEKMKAKAKARAKSLSSNNNAVQSFINPSIREETAEWHFVHDHASKGE 365 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 ++ F N+ + ++ E E + SFR GF L R FL LPF+ + Sbjct: 366 LYLLPTFYNVVLYTTESKE--REHVAKAIASFRHLGFTLTQSRCKQWLRFLGSLPFILTE 423 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFF-RGMNNT 478 GLF L+ G+ ++ FNVANL+P+VAD GL+ PTYR+QL +++ F R + T Sbjct: 424 GLFSSLELLGMTKKLSHFNVANLLPVVADFKGAGQGLIVPTYRHQLFYLNTFDDRALPIT 483 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF 538 N+N ++GAGK+ Q I L G V D+G YK LC+ +GG Y+D TL Sbjct: 484 NFNRLTVASTGAGKSFFEQAQILDGLSRGQQIFVIDLGGSYKHLCKMVGGSYIDASTLAL 543 Query: 539 NPFANITDID---------QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN 589 NPF + ++R+ L++MASP+ L EV + LL AV W Sbjct: 544 NPFTLFDFDGVTEINGQALNDSIQIRNLLAIMASPHEALGEVQKAWLLDAVTECWKVHGR 603 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD 649 RA++DDV+ L+ S+ Q+ RL ++ VLL +Y + G YG FNSD P L Sbjct: 604 RAKMDDVLSALQRMSERPQF----QGDQRLKDLTVLLGKYGSQGIYGHLFNSDTPLLN-S 658 Query: 650 AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL-DFKNHK 708 + VVLE+G LE P LL VMF +I+ I+ + Y + R +K +IDE WR L N Sbjct: 659 SDFVVLEMGELESNPELLTIVMFVMIVIIQGQFYHSDRKREKRCIIDEAWRFLARGSNPV 718 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 FIE+G+RTAR+H G + ITQN++D + RA +S KI+++Q + + Sbjct: 719 CASFIEQGFRTARKHRGGFAVITQNLLD---TMNTLQGRAIAASSDTKIMMRQGS--LKQ 773 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 Y +P F PL+ +I FG AK Q FS+ ++Q N +++HR F DP SR ++S+ G + Sbjct: 774 YMDEHPKHFSPLEARVIESFGEAKTQGFSNLMIQFGNVTTFHRYFCDPFSRVLFSTSGEE 833 Query: 829 FEFVQQKRKEGLSIHEAVWQLAWKKSGPEMAS 860 ++ +G+++ +A+ ++A K G E+ Sbjct: 834 VSDIESLTNQGVTLTDAIQRVAQKYYGEELCD 865 >UniRef50_C5T9V4 Type-IV secretion system protein TraC n=5 Tax=Betaproteobacteria RepID=C5T9V4_ACIDE Length = 860 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 195/849 (22%), Positives = 335/849 (39%), Gaps = 45/849 (5%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPR 92 + QF+ LPY Y + +F+N MGFMLE +P +GA+E + E L L P Sbjct: 25 ADTPAEQFAGWLPYSAYLADEKIFVNRDGMGFMLEVMPQSGADERMAEVLVS-LYANCPP 83 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITR------------AYYMKAAA 140 L HL +S + ++ +QAE+ R ++ Sbjct: 84 DTGLQFHLFASPHIRHQLRQYTNLRVEDEDQAEKARPFGRPVPNENLFRKLARQRVQHLL 143 Query: 141 TQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTV 200 TLR +R+ +S P + L + A+L+ A + + Sbjct: 144 HGTQASLTAGFHYTLRDFRLMLSVAFPGSAADLNRREALLALRDSMAATLRSAMLPNRVC 203 Query: 201 DAQAFIDIVGEMINHNP---------DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 DA I+ N + + + + D ++ Q V+ + Sbjct: 204 DAADLINWCALFTNPDRIAHSDAEDLNYDDDRWLRYDDGREIRDQIVDFDTIQDPHPSGI 263 Query: 252 TLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 TL + AR + + PE LW M +L+ P L S PF++TL + V D Sbjct: 264 TLWKETSAEVLEARF--YSIKSFPERFALWQMGSLIGDLMQPALQYSAPFLITLGVHVLD 321 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 T S ++ + +K+ A P V K+ +W + +G S+VS + + Sbjct: 322 PNATKSIITANHVRATQNAKSKMADVMPDVRKKLDDWSAAANAIDTGG-SLVSLYHQLAI 380 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 F + + +R GF+L + + H + L LP K L + V Sbjct: 381 FTPPDKAASAHEAA--NAIWRARGFQLNADAYMHRQALLASLPMTLTPRFHKDLAKMRRV 438 Query: 432 QRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 R N ++ PL+A+ T L+ R Q+ +D+F + NYN A+ G G+ Sbjct: 439 TRKTMANAIHMAPLIAEWRGTRTPALVFGGRRGQVMTLDLFDNDLG--NYNFAIIGAPGS 496 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDI 547 GK+ L+ L S G + D+G ++ LC G Y++ + NPF + DI Sbjct: 497 GKSVLMNELAWSYRAIGAKVWMLDLGRSFEKLCRKAQGTYIEFRPDVDICLNPFTIVHDI 556 Query: 548 DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 ++ + + +S M S LDEV + V W A N I + D K + E Sbjct: 557 NEDIDMLVPGISKMCSMQHTLDEVQYKAISAMVLKLWRAHGNDLTITGLRDAFKTGTIEE 616 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL 667 R+ ++ ++L+ Y G Y ++F ++ +V+E L+ RP L Sbjct: 617 LGVSGDQ---RIKDLAIMLNPYARGGQYERFFEGRA-NVDFSNDFIVIENEELKRRPDLH 672 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF---KNHKVGEFIEKGYRTARRHT 724 V L+ I MY T RN +K+ IDE + L + +E+ R AR++ Sbjct: 673 AVVNILLLHQITGEMYLT-RNRRKVLFIDELKQQLGDIGADDPIKAAVVEEAARRARKYG 731 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 GA T TQ+ D+ S+ AA+ S + +L+Q + ++ ++ + Sbjct: 732 GALGTATQSADDYY---GSAQMEAAFNCSDWVFLLRQKPESIEMLDRKGRLAMDEPKKRL 788 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 + FS + R +DP + ++S+ D + R +GLSI E Sbjct: 789 LNSLRTEAGA-FSELYISSPVGEGVARNILDPATHLLFSNKLEDNAPIDALRAQGLSIDE 847 Query: 845 AVWQLAWKK 853 A+ +L ++ Sbjct: 848 AIAELLRQR 856 >UniRef50_C5SIK7 Type-IV secretion system protein TraC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK7_9CAUL Length = 915 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 198/860 (23%), Positives = 343/860 (39%), Gaps = 56/860 (6%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 P S LPYR +++ L++ D T+G +LE IP+ G ++ L + LP G + Sbjct: 41 PSLSGYLPYRSFDEVRQLYVQDATVGLVLELIPLLGVTDAQHALLAQVFNDALPDGAHVQ 100 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 I +S G ++ R S GE E R + M T F + P ++R Sbjct: 101 IINYASPRTGHIVDSWARSRSAGGEIFEELARHRRQHLMNGIWTSF----SKSAPFSMRD 156 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP 217 YRV ++ A + L ++I+ +L T+ + ++N Sbjct: 157 YRVILAIEVRGDVSGPAG-DALAELREVIKGTLASMGGAAFTLMPDQLLSFCAAVLNPTS 215 Query: 218 DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA------------R 265 ++Y D LN Q V + D L G Sbjct: 216 STVY-DSIPYDREDWLNQQIVRRDTTVTQYRDRLVATTAYAGDGYDQDLLPKGSRRERWE 274 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 F R PE A +A + N +L + L ++ + +K M Sbjct: 275 FRAFSPVRYPENASQAVVARLIGDFFNNQLQNIGSNLTVLYFSPMTLDESKTTVEMKTMR 334 Query: 326 LEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 +++ + AK+FP++++ A +W Q + G + + A + A E+ Sbjct: 335 TSQQASSPTAKFFPAIQRAADDWTAANQAVSMGAKL---CHMGMFAISITPLQDADRAER 391 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 + + GFEL H++ L LP G GL K ++R + +A L P Sbjct: 392 QLRAVWGGAGFELSRSDVLHLQTLLAALPLTMGDGLADDYKAHKRLRRMPTSCMAMLAPF 451 Query: 446 VADNPL-TPAGLLAPTYRNQLAFIDIFFR---GMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 + +L R Q F F GM N+N++V G SG+GK+ L+Q + Sbjct: 452 QGEFRGFQRPDMLFLGRRGQPFFFSPFSNEEEGMGGGNHNVSVIGASGSGKSVLMQEMAG 511 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANIT----DIDQS---- 550 + G +V D G +++ C+ GG +++ L NPF+ + D+D+ Sbjct: 512 GLRGRGADVIVLDDGYSFRNTCKIQGGQFIEFNLSSDLNINPFSLVDYQEADLDEEYRSE 571 Query: 551 -AERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQY 609 ++ + MA + + G++ +AV + K I+DV +L+ Sbjct: 572 SINALKYTVLQMAKGDDLYLKEELGMIERAVVEVFETKRAEGGIEDVALYLEA------- 624 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 M + ++ Y G+YG+ +N + +L + V EL LE + L Sbjct: 625 ----HFGDPGRAMAIAMEPYRLRGSYGKLYNG-QANLEISSPFTVFELSPLESKKDLRAV 679 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 V+ SL++ I RM R KK IDE W+LL + G FIE R R+ GA IT Sbjct: 680 VILSLLMVIRQRMKHGGRARKKALFIDEAWQLLG--DGAAGPFIEGFARRCRKEGGALIT 737 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQ++ D+ + ++ RA NS + IILK + + + + ++I Sbjct: 738 GTQSLEDY---QRTAGGRACIQNSEWNIILKLKPESVDAFANEGILRASEAELELIRSLF 794 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 ++ + +S ++ RL +DP S A+YS+ + +++ G S EAV + Sbjct: 795 TSQGE-YSEAYIRGAGTKFIGRLVLDPYSLALYSTKPEVLDAIERLVSAGYSAKEAVRSV 853 Query: 850 AWKKSGPEMASLEAWLEEHE 869 A+ K E +A + + E Sbjct: 854 AF-KVPIETHWSKAQIRQAE 872 >UniRef50_Q1MY39 ATPase n=1 Tax=Bermanella marisrubri RepID=Q1MY39_9GAMM Length = 849 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 210/841 (24%), Positives = 378/841 (44%), Gaps = 51/841 (6%) Query: 29 NEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRT 88 + M+ S L P+ Y++ G+F N+ ++GF LEA P G +E+ + L+ ++ Sbjct: 39 QQQKAFMNRYNLSSLFPWESYDETRGIFFNEDSVGFCLEASPSTGLSEADFKTLEGVISR 98 Query: 89 KLPRGIPLCIHLMSSQLVGDRIEYGLREFSW-----SGEQAERFNAITRAYYMKAAATQF 143 K + +++ V + R + + E + + R Y ++ Sbjct: 99 KHEADSTIQFTIVADSNVDGIYKSWERSRTRNFDDPAYEIFQTLSENRRKYLLQGKWKSL 158 Query: 144 PLPEGMNLPLTLRHYRVFISYCSPSKKK---SRADILEMENLVKIIRASLQGASITTQTV 200 +P +R++R+ IS+ P + S+ + + + + I ASL+GA + ++ V Sbjct: 159 ----FSGMPYVVRNFRLIISFTIPKPRGGNISQTTVDALSSKRESIIASLKGAKVHSKLV 214 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGR 260 Q I++V +++ D P D S + Q V D G R Sbjct: 215 HPQDLINLVSALLHPTDDGYKP--VNYDENSLIKDQIVSSETAFLPGRD----GSSIIYR 268 Query: 261 NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEAN 320 + +L + + + P+ N + + L+ I CPFI T+++ D+V + Sbjct: 269 DKKVSVLPWSVRQYPQYWKGSNSDELIGSFLDNVRQIPCPFITTMSINFPDRVDEGGKIK 328 Query: 321 LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 K M + + ++ +K+ P +K A +W + ++ +G S+V + F E Sbjct: 329 QKTMRATQMADSAVSKFVPQWKKRASDWRYIEEKFQNGS-SLVKTLYQVVLFAPQGEEE- 386 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 EQ + + + G+ L RF + FL+ LP + G+ +R ++N Sbjct: 387 -SCEQALQDLYESYGWNLQKDRFIPVHGFLSALPMIFGREFVDDTNRLRRYRRMLTWNAI 445 Query: 441 NLMPLVADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 N+ PL + L R Q+ ID + N+N+A +SGAGK+ + Sbjct: 446 NVSPLFGEWQGDGNNSLLMHGRRGQVMTIDPYQNKAG--NFNIACSASSGAGKSFFTHEM 503 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG----ETLRFNPFANIT----DIDQSA 551 I SVL GG +VFD G Y+ +GG YLD T+ NPF NI + Sbjct: 504 IFSVLGEGGKVIVFDSGRSYEETVTLLGGQYLDFGDKTRTICLNPFTNIPLDEGGLKDHL 563 Query: 552 ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE 611 ++ +S MASP+ ++ ++ + L QA+ ++ N+ + V++ L + E Sbjct: 564 PLLKILISNMASPSEDIPQIMKSALEQAIAKAFAKFRNKCSVTRVIEELLEMNSDESI-- 621 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 E+ +L Y+ +G YG+YF D ++ + VVLEL L +P L V+ Sbjct: 622 ---------ELSKMLYPYSRDGVYGEYFEGDA-NIDLQDRFVVLELDDLAKKPGLQEIVL 671 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 L++ I Y + R+ KKL +IDE WRLL + G+FIE+GYR AR++ GA++T+T Sbjct: 672 LILMMNINEVFYHSDRSQKKLCIIDEAWRLLQ---GRAGDFIEEGYRVARKYGGAFMTVT 728 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 Q I D+ + S A+AA+ N+ + +L+Q E + + ++ Sbjct: 729 QRIADYYT---SPVAQAAYANADHTWLLRQKTDELRSSIERGEIDGSKGKFEVFNSLKTE 785 Query: 792 KDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 + + +S RL VDP++ +YS+ + +F++ KRKEG+ + A+ +LA Sbjct: 786 QGK-YSEIAFMSPAGLGVGRLIVDPVTEKLYSTKAEEVQFLRNKRKEGVDLMTALTELAG 844 Query: 852 K 852 K Sbjct: 845 K 845 >UniRef50_C4NVU8 TraC n=29 Tax=Gammaproteobacteria RepID=C4NVU8_ECOLX Length = 815 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 174/842 (20%), Positives = 339/842 (40%), Gaps = 47/842 (5%) Query: 29 NEVLGEMSFP---QFSRLLPYRDYNQESGLFM-NDTTMGFMLEAIPINGANESIVEALDH 84 + L E P + + ++P Y+++ +F+ +D + GF P+ GA+E + E ++ Sbjct: 6 KKKLEETLIPEHLRAAGIIPVLAYDEDDHVFLMDDHSAGFGFMCEPLCGADEKVQERMNG 65 Query: 85 MLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ-- 142 L + P L L S + + + + R +++ T Sbjct: 66 FLNQEFPSKTTLQFVLFRSPDINQEMYRMMGLRDGFRHELLTSVIKERINFLQHHTTDRI 125 Query: 143 -FPLPEGMNLPLTLRHYRVFISYCSPSKKK--SRADILEMENLVKIIRASLQGASITTQT 199 +G+ ++ ++F++ P K + +++ ++ L + +SLQ + +T Sbjct: 126 FAKTNKGIYDNGLIQDLKLFVTCKVPIKNNNPTESELQQLAQLRTKVESSLQTVGLRPRT 185 Query: 200 VDAQAFIDIVGEMINHNPDSLYPKRR-QLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN 258 + A +I I+ ++N PD+ + + + Q + D++V + + LG Sbjct: 186 MTAVNYIRIMSTILNWGPDASWRHDSVDWEMDKPICEQIFDYGTDVEVSKNGIRLGDYHA 245 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 + P++ + + +L SI +++ + + T + Sbjct: 246 --------KVMSAKKLPDVFYFGDALTYAGDLSGGNSSIKENYMVVTNVFFPEAESTKNT 297 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 K ++ K+ P + + + + L + + G V ++ F E Sbjct: 298 LERKRQFTVNQAYGPMLKFVPVLADKKESFDTLYESMKEGAKP-VKITYSVVLFAP-TKE 355 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 N +R++ FEL+ +F + FL CLPF + + L + + Sbjct: 356 RVEAAAMAARNIWRESRFELMEDKFVALPMFLNCLPFCTDRDAVRDLFR---YKTMTTEQ 412 Query: 439 VANLMPLVADNPLTPAG-LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 A ++P+ + T + QL + + NTN N+ + SG+GK+ L Sbjct: 413 AAVVLPVFGEWKGTGTYHAALISRNGQLMSLSLHDS---NTNKNLVIAAESGSGKSFLTN 469 Query: 498 PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERV 554 LI S L G V D G Y+ L E + G ++ +G + NPF I + + + + Sbjct: 470 ELIFSYLSEGAQVWVIDAGKSYQKLSEMLNGDFVHFEEGTHVCLNPFELIQNYEDEEDAI 529 Query: 555 RDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 + MAS G LDE L Q + W K ++DD+ + Sbjct: 530 VSLVCAMASAKGLLDEWQISALKQVLSRLWEEKGKEMKVDDIAERCLE----------EE 579 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 RL ++ L +T+ G+YG+YF S + ++ + VLEL L+ R L V+ L Sbjct: 580 NDQRLKDIGQQLYAFTSQGSYGKYF-SRKNNVSFQNQFTVLELDELQGRKHLRQVVLLQL 638 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 I I+ ++ RN KK+ ++DE W LL K +V F+E YR R++ G+ + TQ+I Sbjct: 639 IYQIQQEVFLGERNRKKVVIVDEAWDLL--KEGEVSVFMEHAYRKFRKYGGSVVIATQSI 696 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D + + RA NS+ +L Q+ + + + + Sbjct: 697 NDLYEN---AVGRAIAENSASMYLLGQTEETVESVKRSGRLTLSEGGFHTLKTVHTIQG- 752 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 +S ++ ++ RL V + +YS+D D + Q K+G+SI EA+ + + Sbjct: 753 VYSEIFIKSKSGMGVGRLIVGDFQKLLYSTDPVDVNAIDQFVKQGMSIPEAIKAVMRSRR 812 Query: 855 GP 856 Sbjct: 813 QA 814 >UniRef50_B4RLR8 TraC n=10 Tax=Neisseria RepID=B4RLR8_NEIG2 Length = 858 Score = 507 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 187/869 (21%), Positives = 341/869 (39%), Gaps = 31/869 (3%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFM------- 57 + +++ N L + + + + F S L Y Y+ ++ LF Sbjct: 1 MGVLSKFKNWLAGSDDVDQPMEALHNNPVDPDFDHLSDYLNYGAYDTKTELFTLMSVKGD 60 Query: 58 NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYG--LR 115 MGF+LE P G ++ ++ L LP P+ + + S + + + ++ Sbjct: 61 KPLGMGFILELNPFLGGSDDLIGKWGS-LYALLPEKTPIQVQIFGSPDLRNYFKEYEQVQ 119 Query: 116 EFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRAD 175 + + N + LR+ R +S + + Sbjct: 120 ASRPIDDPMRSTFETLAKKRTEFWNKGTQKVLVENTAIRLRNLRCILSVNLNIPPDNAVE 179 Query: 176 ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL---YPKRRQLDPYSD 232 + + +L+ +R SL+ I +T +A + ++N N D Sbjct: 180 VSKAVSLLARMRDSLRSMQIYGRTWNADDLLAWTTLLLNPNRMFTGQQDEIDPVWDETKF 239 Query: 233 LNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLN 292 L+ Q +E +KV L + R PE L NM +++ Sbjct: 240 LSEQMIETRTSIKVLDSGSGLRFGNRAAGDCVIAQCYSANRYPEEFHLSNMGALIGDVIE 299 Query: 293 PELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELR 352 ++ + PF++++ + D + + LK ++ +++ A P K +++ Sbjct: 300 ANMNYTSPFLISMAMFKRDYDTSSNTVKLKAARAKQTAESKMAAVMPEAAKIKRDYDICL 359 Query: 353 QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 + G G +VS + + + E E ++ ++ GF L ++ + ++LT Sbjct: 360 EAFGKGGGGLVSLLHQVVIW--ERPENINLAESQAVSIWQAQGFGLYRDQYLQLGSYLTA 417 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIF 471 LP K + K L N + P++ + + R Q ID+F Sbjct: 418 LPMAIDKEVEKYLDSKKRWSTKTMTNAVCMSPVIGEWHGLGRPVIGLFGKRGQAMGIDLF 477 Query: 472 FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL 531 NYN A+ G SG+GK+ ++R+ + G + D+G Y+ C+ +GG Y+ Sbjct: 478 ANPAG--NYNFAIIGASGSGKSFFANEIVRNYMGLGTQVWIIDVGRSYEKFCQMIGGQYI 535 Query: 532 DGE---TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 + L F PF +TDI++ E ++ S+MASP+ +L E E L + + W Sbjct: 536 EFTYEAGLCFPPFQMVTDINEDIEMLKLIFSLMASPSDSLTEQQEAKLQRIIEEVWYEFG 595 Query: 589 NRARIDDVVD-FLKNASDSEQYAESPTIRS-RLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 +D V + LK P R + + L Y + G YG YFN + ++ Sbjct: 596 QEGTVDHVRERCLKCLITGSNEGGKPGERDLSMVAVADQLYTYCSEGIYGSYFNG-KLNV 654 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 +VVLEL L+ +P L +M ++ I MY + R+ K+ +IDE W LL Sbjct: 655 EFKNDLVVLELEELKTKPDLQQIIMQLIMYRIMQGMYLS-RSQYKIMMIDEAWALLG-DT 712 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 FIE+GYR R++ GA T+TQ D+ + AA AA N+ + L+ AK Sbjct: 713 GTAARFIEEGYRRVRKYKGACGTLTQGANDYYK---TKAAEAALENADFVFQLRTGAKSL 769 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 P + ++ +K ++S + RL+ DP + SS Sbjct: 770 KTIQDKEPFEVNDGIMQILRTL--SKTDYYSEIFVSTPIGYGVGRLYSDPFNVLASSSKA 827 Query: 827 PDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 D E V R +GL+ EA+ + ++ Sbjct: 828 EDVEAVNHYRNQGLNTAEAIEAVLRDRAA 856 >UniRef50_B2I3Z2 Type IV secretory pathway, VirB4 component n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Z2_ACIBC Length = 908 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 200/900 (22%), Positives = 363/900 (40%), Gaps = 82/900 (9%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT-TMGFMLEAIPINGANESI 78 K N++L Q + Y +N + L+ ND ++ F LE IP G+NE Sbjct: 30 KKFSTVDLTNKILESYGMYQ---IFKYNMFNVKRSLYYNDGPSVSFALEIIPQTGSNEDF 86 Query: 79 VEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREF--SWSGEQAERFNAITRAYYM 136 V + ++ + P + I + + D ++ L + + F + Sbjct: 87 VSRIVSIISS-FPAETGIQILNFGNTIFEDDLQEYLDLRVAEYQNGKVSDFAIEFAKNRI 145 Query: 137 KAAATQFPLPE-GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 K ++ P+ G + ++ ++ +S K I +ME L+ A LQ A + Sbjct: 146 KHIQSRKGRPQFGRDSYYVIKKPKIILSVTRSGSYKDPQLIKQMEELLHQTSAQLQQAKL 205 Query: 196 TTQTVDAQAFIDIVGEMINHN-------PDSLYPKRRQLDPYSD-----LNYQCVEDSFD 243 + + I+ M++ P+ + R + Q Sbjct: 206 PNIVLTPMLLLKIIKPMLDPESLFRTVPPEHEFQVSRSYYSEDYNRLESIKSQLTPRGHS 265 Query: 244 LKVRADYLTLGLRENGRNS--------------------------TARILNFHLARNPEI 277 V + G + F + R P+ Sbjct: 266 ATVGVSEIVFGQPIIDKTKGTNRSVRVYDSEWIEEDDDEDLEEDNRIAFRGFGVMRYPKF 325 Query: 278 AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKW 337 L+ M + + L CP+I+++ + + D+ + ++A +K + +++ AKW Sbjct: 326 KHLYEMGNVIGDFFENSLQYPCPYIISMGIHILDKTSSETKARIKQARSTQNAESKMAKW 385 Query: 338 FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFE 397 P + A++W + L G + + I F + ++ N ++ NGF Sbjct: 386 QPEYAEIARDWNAITYHLHKGGG-MCELYHTIGIFAPRS--QLDSYSANVDNLWKSNGFS 442 Query: 398 LISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL-TPAGL 456 ++ + + +P + K LK+ ++ + N ++MP++++ + Sbjct: 443 VMPLSCLQLPLLYSSMPMILTKKARDDLKKLKLITTKTTINAVDMMPILSEWQGFGKPVI 502 Query: 457 LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 + R F D+F NYN +CGTSGAGK+ ++ + G + D+G Sbjct: 503 MVFGRRGTPCFFDLFSNKQG--NYNFYICGTSGAGKSVFSLEILAAYKSLGFKIYIIDVG 560 Query: 517 DGYKSLCENMGGVYLDG---ETLRFNPFANITDIDQSA---------------ERVRDQL 558 +K+ G +D E + NPF + I+ + + Sbjct: 561 RSFKNFVALGKGQAIDFAKREKICMNPFTWLEVIEDEELSEKEGTLNTFAQEMKMLLPMY 620 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 + MASP+ LD+ + LL +A+R +WL N +D + DFLK D I +R Sbjct: 621 AKMASPSKPLDDYDKALLSRAIRETWLKFRNNNGVDQISDFLKEIRDQNG-----NIDAR 675 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + L+ + NG YG YFN + ++ + +M+ LEL L+D P L V+F ++ I Sbjct: 676 GWALGTQLENFKTNGMYGSYFNG-KANIDMNNEMIYLELEELKDSPELKTVVLFGVMNRI 734 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 MY + R+ K+ +DE W+LLD + FIE+GYR AR++ G++ TQ I D Sbjct: 735 MRDMYLS-RSQGKIVFVDEAWQLLD-DTEETAAFIEEGYRRARKYFGSFGMGTQGI---D 789 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 A+ AARAA+ +S +K L+Q + F K Q F I + W+S Sbjct: 790 DAFANDAARAAYNSSDWKFFLRQDEQSFEKLLQEKKANFSEAVIKQIKSIESIHG-WYSE 848 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 ++ N R DP S AM S++ D+ F+++ +G+S+ EA + L KK E+ Sbjct: 849 IMVTSPNGQHIVRHVADPFSLAMASTNKDDYNFIEECTNKGMSMTEATYALMRKKEAEEV 908 >UniRef50_B7XGR7 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGR7_PSEPU Length = 821 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 180/835 (21%), Positives = 324/835 (38%), Gaps = 50/835 (5%) Query: 36 SFPQFSRLLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 S P+ S+L+ Y LF + +GF P++G+N + L L P Sbjct: 8 STPRLSKLINGLAYEPNLYLFQLEGNRLGFAFLCSPLSGSNGDEGDRLKAGLTVDWPEKT 67 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGE--------QAERFNAITRAYYMKAAATQFPLP 146 + L+ ++ + + LR E + + + + P Sbjct: 68 TIQFSLICTENINEMKTGFLRLRRAFRESGRTDLPVETQALLEKVTNARADYFSDRTMRP 127 Query: 147 EGMNLPLTLRHYRVFISYCSPSKKK--SRADILEMENLVKIIRASLQGASITTQTVDAQA 204 + +R + +S P ++ + + L +R SL ++ + + Sbjct: 128 VDSISGVRIREQSLVVSVTIPIANALPTQTEANAAKELFDGLRTSLDSCNLAAVPLTNDS 187 Query: 205 FIDIVGEMINHNPDSLYPKRRQL--DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS 262 + +I ++N P + + + + D LN Q ++ + L V+ D+L +G Sbjct: 188 YREIFSSILNQGPTASWREDPDMKADTDKPLNEQILDYNRSLDVKKDHLQIG-------E 240 Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 + R P++ + + + +++L+ I I+ +TL Q++T + + + Sbjct: 241 DCFVKTLSAKRFPDVMWQGDASQYLADILSQRGGIRGNCIINMTLYFPPQLETKDKLSKR 300 Query: 323 YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALE 382 +S + P + K + + L + L G V + + F ++ E ++ Sbjct: 301 RQWSINQSFGPMVHFVPVLRKTKEAYDTLFEDLDKG-LPNVQATMTLVVFGRNR-EDLIQ 358 Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + + F GF L+ +F + F+ LP A K+L + L Sbjct: 359 AASNAKSHFATQGFSLMEDKFCVLPVFVNSLPMCADPDAMKELFRF---KTLSLTQALPL 415 Query: 443 MPLVADNPLTPA-GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 +P+ D T + Q +F TNYN + SG+GK+ LI Sbjct: 416 LPIYGDWKGTGTHVAPFISRNGQPVSFHLFDSD---TNYNAMIAAQSGSGKSFATNYLIT 472 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGG---VYLDGETLRFNPFANITDIDQSAERVRDQL 558 S L G V D+G Y L E G + L NPF I D + + + L Sbjct: 473 SYLSIGAKVWVIDVGLSYLKLSEAYKGDFARFDQESNLCLNPFELIEDYSEEEDVLVGLL 532 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 S MA+P L + L + + W +D + D L D R Sbjct: 533 SAMAAPTVPLIDFQTAGLKRHLTQCWETLGKTMIVDSIADSLLADPD-----------PR 581 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + ++ L +T+ G YG++FN + +L VLEL L+ R L V+ LI I Sbjct: 582 IQDIGHQLFAFTSKGQYGRFFNG-KNNLNFKNPFTVLELEELKGRQHLQQVVLLQLIYQI 640 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 + MY R+ K+ +IDE W LL N VGEFIE GYR R++ G+ I ITQ + D Sbjct: 641 QQDMYLGERDRPKIVIIDEAWSLLSQGN--VGEFIEHGYRRFRKYGGSAIVITQGVNDLY 698 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 +K +A NS++ ++L Q A+ + ++ + K +S Sbjct: 699 QNK---VGQAIAENSAFTLLLGQKAEAIDAIQENKRLPLGEGGYRILKTVKSYKG-HYSE 754 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 + + RL VDP S +YS+ D + ++ G+ EA+ ++ + Sbjct: 755 IFMLTPRGAGIVRLTVDPYSILLYSTAPEDVQAIRNYTLTGVPQDEAILRVLRDR 809 >UniRef50_Q5ZTS4 TraC n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS4_LEGPH Length = 865 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 216/864 (25%), Positives = 379/864 (43%), Gaps = 50/864 (5%) Query: 8 VTQAVNSLVTALKLPDESA---KANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGF 64 ++ A SL+ L+ ++ + + LP Y+ E+ ++ Sbjct: 34 LSHATGSLLETLREELGMTDAHHKKQIEALLDTYCLAPYLPDEVYDSEADIYPYKQASHM 93 Query: 65 MLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQA 124 M E + GA+E V L +L LP +S +G I+ + + E Sbjct: 94 MFECSTLIGASEETVTILTSILTDILPPESCFHALFWASPKIGHMIDEMEHQRNQGSEVL 153 Query: 125 ERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVK 184 + +Y K + LR +R+F+ P K D L + +L + Sbjct: 154 KALAHRRAEFYRKGVYSSLT----KESNFVLRDFRLFLCISIPRKS-IEDDRLLLGSLRE 208 Query: 185 IIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDL 244 I +L+ +I + + + I + E + DSLY ++ D +++ +Q + + Sbjct: 209 DISNNLKSVNIICKELSIEEVISLKREWLFP-TDSLYEEKTNYDTNTEIRFQLTDIEASM 267 Query: 245 KVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 +V+++ + + E+ T I + + P+ W + D + + N L ISCPF+ + Sbjct: 268 RVKSNQIEIEREED----TRVIKCLSVRQYPKSPVQWQLGDLFGKMFNTSLQISCPFLFS 323 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSY-AKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 + ++D+ K + + KY D + +K + AKW + K+ E ELR+RL SG S+V Sbjct: 324 FAIRIKDKDKVMAALDAKYADEGQNAKQPFIAKWVKNFNKKYAEIEELRERL-SGDDSLV 382 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + N+ F + + FR N F+L +P ++ L +PF +G+F Sbjct: 383 DSYYNVLLF--TTPANVRRDVRRAKDVFRGNQFDLRTPTGLQLQTLLASMPFAPAEGMFD 440 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPA-GLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 K G V+ SFN NL+P+ + + P R Q I F + NYN+ Sbjct: 441 DYKSFGRVRPLTSFNTVNLLPIQGEWKGAGRFAQVYPQRRGQFTAIYFFDNVVR--NYNV 498 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFN 539 A+ G GK+ L+ I+S+L GGF + D+G Y CE + G +D + N Sbjct: 499 AIVAPPGKGKSFLMNDYIQSLLSQGGFVYIIDVGGSYAKSCEMLNGQLIDFNHDTEISLN 558 Query: 540 PFANITDIDQSAERVRD-------QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRAR 592 F+ I ++ +D + +MA P+GN+ + + +A+ A W N Sbjct: 559 LFSTIDAQAKNDTAFKDVHNQLIQLVGMMARPSGNVSDEERSHIEKAIEAMWRQHHNATT 618 Query: 593 IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM 652 I + L++++D + LL YT NG YG YF SL + Sbjct: 619 ITLIAHHLESSND-----------PISQNIGRLLYSYTKNGRYGSYFE-PPCSLDFKRNL 666 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK-NHKVGE 711 V+LELGGL+ L V+ L+ I N MY TP+++ K +IDE + LL Sbjct: 667 VILELGGLDGNKDLQRIVLKILMYQITNAMYYTPKHIPKSCLIDESYELLSDNGTGGSAN 726 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 F+ +GYR A ++ G +IT+T + D++++ A+ + N+ YKI L S Sbjct: 727 FVNEGYRRAPKYGGNFITVTHGLDDYENN---PTAKMCYDNAYYKIFLGASKSTIDTLK- 782 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 +Q +I + +S FL+ E +S+ HRL VDP SR + ++ GP+ E Sbjct: 783 -TSNQLDAYGERLIRSLKITNE--YSEFLMMCEENSTVHRLIVDPFSRVLNTTRGPEVEA 839 Query: 832 VQQKRKEGLSIHEAVWQLAWKKSG 855 +++ GL + +A+ ++A + G Sbjct: 840 LKRLMATGLPLADAISKVALEVYG 863 >UniRef50_Q2LTZ9 Sex pilus assembly protein n=3 Tax=Deltaproteobacteria RepID=Q2LTZ9_SYNAS Length = 844 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 175/862 (20%), Positives = 340/862 (39%), Gaps = 56/862 (6%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMN-DTTMGFMLEAIP 70 + L + ++ +FS LP+ Y+ E+ + N D T GF+ E P Sbjct: 15 MGKLFDVIFGARGGMTRKDLRNLTRRDRFSDYLPWIAYDGETEAYHNADGTKGFLWECSP 74 Query: 71 INGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI 130 + A E + L+ + R LP G + L + + IE + + Sbjct: 75 LCFAGEKTLFTLEGLFRLGLPHGSVMQFILHADSHIDPYIEAYRSGKTRDLAIVHEASEK 134 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASL 190 A +++ + LR++R+F++ P +++ + ++L I L Sbjct: 135 FAA-FLEKGVEGMDIFLKT----PLRNFRLFVAVKFPEEREMKL---HAKDLSNSILEIL 186 Query: 191 QGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 +GA + + V A ++ + +N P P D + Q + ++ D Sbjct: 187 RGADLYPRPVPPHALVEWMRRYLNDVPS---PNNDAYDDSIPIRKQVIFSDTVIEKSMDR 243 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNL---LNPELSISCPFILTLTL 307 + +G R + P+ + + + ++ I+ PF L + Sbjct: 244 MKVGNR--------YFRCTTVKHYPKEVDPLQTNELFGGVWGVVSDANQITTPFFFALNV 295 Query: 308 VVED-QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYF 366 V + + K H++ NL L+++ S+A PS+ ++ E+ + G + V Sbjct: 296 VFHNLKSKLHTKCNL---VLQQQGVGSFA---PSLMRKKDEYMTAVDEVEKG-TPFVRV- 347 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 + I D+ +T E + G+ + R FL+ LPF + Sbjct: 348 IPILWVWGDSEKTVSESIVRAKRMWEAQGYVMQEDRGILPVLFLSSLPFGL-YDRDDNVD 406 Query: 427 EAGVVQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 A +VA +P+ AD + L+ + Q +D+F R N+N+ + Sbjct: 407 NLDRDFIAPCDSVAVTLPVQADFSGGGKPSLIFIGRKGQPCSLDVFDRHA--NNHNIFIA 464 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFA 542 +SG+GK+ L+ L+ + S + D+G YK + G +LD + NPF Sbjct: 465 ASSGSGKSFLVNYLVYNYFASSALIRIVDIGGSYKKMTRLFGARFLDFSEQSRICMNPFT 524 Query: 543 NITDIDQSAERVRDQLSVMASPNGNLDEVH-----EGLLLQAVRASWLAKENRARIDDVV 597 N+ D + + M + ++ L+ AV+ +W + A ID V Sbjct: 525 NVMDPAGDLPVIASIVLQMVYSSTDIVPEDTAETAMSLIKSAVKWAWRTEGADASIDTVY 584 Query: 598 DFLKNASDSEQY------AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 ++L + + + RS + L ++T+ YG++FN + Sbjct: 585 EYLSTFPEHAEEFDSCHENDIAAFRSLSRNLSFNLTEFTSGHLYGKWFNGTSDFNIAGDE 644 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 VVLEL L+ + L + +I + +Y + R+ + + DE W+ + + + Sbjct: 645 FVVLELEHLKPQKELFKVITLQVINAVTQDLYISDRSRPRFIIFDEAWQFMQEGS-SLKG 703 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 IE+GYR AR++ G++ ITQ+I+D + S NS++K L+ S + AK Sbjct: 704 VIEEGYRRARKYGGSFTVITQSILDL--KQFGSIGDVIRSNSAFKFYLESSDFDRAKLEG 761 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 L + L ++ + K + +S + RL VDP S +Y+SD + Sbjct: 762 LIEHEGFAL--KILKSVRSNKPK-YSEIFMDTPFGQGVARLAVDPFSYYLYTSDAAEIAE 818 Query: 832 VQQKRKEGLSIHEAVWQLAWKK 853 ++ G+S EA+ ++ + Sbjct: 819 IESLVDNGMSYGEAINEMVKRY 840 >UniRef50_Q8L274 Pilus biogenesis protein n=5 Tax=Gammaproteobacteria RepID=Q8L274_PROVU Length = 828 Score = 490 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 182/849 (21%), Positives = 329/849 (38%), Gaps = 57/849 (6%) Query: 31 VLGEMSFPQFSRLLPYRDYNQESGLF-MNDTTMGFMLEAIPINGANESIVEALDHMLRTK 89 V +FS + P Y++++ LF + + + F P+ G+ + L +L + Sbjct: 7 VRKLKGIKRFSDVCPVNAYDEKNRLFTLENKYIAFGFVCRPLAGSTGKETDQLKTLLSSN 66 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGM 149 P + L++S + +I + + R+ ++ + Sbjct: 67 FPPKTIVQWDLIASPNIVKKINQMDFLRINCEDPILKNAIYNRSKFLLHSTD----YPMK 122 Query: 150 NLPLTLRHYRVFISYCSPSKKKSR---ADILEMENLVKIIRASLQGASITTQTVDAQAFI 206 + +R + + P K ++ SL + + +++I Sbjct: 123 GVGTRVRDCLLVCTVKIPIKANYEPKDEEMNLFNEFRTSFDTSLGILGLAPSPLTRESYI 182 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDL--NYQCVEDSFDLKVRADYLTLGLRENGR---- 260 DI+ ++N ++ + R + DL + Q V+ +R+ Y+ G E+ + Sbjct: 183 DILASVLNQGENASWRDRSPVQVQDDLLVSEQLVDPDRSFFIRSKYVAFGNPEDEKQRGE 242 Query: 261 --NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 T I + P + +L++ I I++++L+ DQ S Sbjct: 243 RQTETTFIRTLSAKKLPTRFWPGQAQYYLGDLMSGATGIKSSCIISMSLIFNDQQSAKST 302 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 K + ++S AK PS + + + L +L +G V ++ F ++ + Sbjct: 303 FTRKRAWVVQQSDGPMAKLIPSYKTSREGFDILADKLDNG-EPVCRAKFTVSIFS-NSKD 360 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 Q+ + F+++ FL+ LP K G + Sbjct: 361 GVFRASQEAASYLNTYQFKMVPDTNFVAPIFLSALPMFNEASAEK---VIGRYRTLALSE 417 Query: 439 VANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 L PL AD T L+ + Q+ ID+F TNYN + SG+GK+ L Sbjct: 418 ALVLTPLYADWQGTKNPALMLTSRSGQIQMIDLFDSD---TNYNACIAAESGSGKSFLTN 474 Query: 498 PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDI------- 547 +I + G D+GD YK++CE GG YLD N F I D Sbjct: 475 YIITAYRSLGAKVWCIDVGDSYKNICETYGGDYLDFHPDKKPCLNFFELIEDYFGEDPTN 534 Query: 548 ---DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNAS 604 + + + L+VMA+P LD+ L + V + +D V + + Sbjct: 535 TDGNGEEDLIIGLLTVMAAPQKGLDDFQTARLKEHVALLIREHGKQTTVDMVAESCLKDA 594 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRP 664 D R+ ++ L +T+ G YG+YF + ++ VLEL LE Sbjct: 595 D-----------RRVSDIGSQLYPFTSRGQYGRYFVG-KNNIDFRNPFTVLELSRLESSE 642 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 L V+ LI I+ M+ R+ K+ VIDE W LL +G+FIEKGYR R++ Sbjct: 643 HLKQVVLLQLIYQIQQDMFLGDRSQMKIVVIDEAWALLK---GNIGDFIEKGYRRFRKYK 699 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 GA ITITQ+I D D S +A NS++ ++L Q + Sbjct: 700 GAAITITQSINDIYKD---SVGKAIADNSAFMLLLGQGESAINEAQASKRLALDDAGYRF 756 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 + ++ +S + + RL VDP S +YS+ D +++K+ GL+ + Sbjct: 757 LKTVRSSSG-VYSEVFVISKAGQGISRLIVDPFSLLLYSTHPDDVSEIRRKKDGGLTTEQ 815 Query: 845 AVWQLAWKK 853 A++++ + Sbjct: 816 AIYEILRDR 824 >UniRef50_Q3IUW4 TraC n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW4_RHOS4 Length = 827 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 196/852 (23%), Positives = 351/852 (41%), Gaps = 61/852 (7%) Query: 18 ALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANES 77 + A A +++ + LLPYR ++ ES LF N + GF++E P+ GA++ Sbjct: 16 DWSEDEPQALATDIV--------ADLLPYRLFDPESELFFNQNSTGFLIEVNPVVGADD- 66 Query: 78 IVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMK 137 + L ++ + P G + +S + ++ R E R +++ Sbjct: 67 VASNLQAVINSNAPNGATIQFLNWTSPDIDGQLVRWARHRLRGDELVMEMAQ-RRMAHLR 125 Query: 138 AAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITT 197 A H RVF++ C + E++N + + + G Sbjct: 126 GARFGTDHVIKALPH----HRRVFVA-CWLDGDADLSQQKELKNFRRSLYSVFGG-EAYV 179 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE 257 + + F+ +GE+++ + LN+Q ++ A L Sbjct: 180 RHLGPDDFLKFLGEVLHCR-GLVGISDLTYTAEEALNHQLPGAGLTVQRTAIGLM----- 233 Query: 258 NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS 317 + + + R P + P + + T+ V + S Sbjct: 234 --GEPPMAVSSATVRRFPREWQFVLGILLNGVPERIAERPAGPVLTSFTMRVRSKSDATS 291 Query: 318 EANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNN 377 K L+ + T +A++ + ++ E+ L Q++ G+ + + A+ K Sbjct: 292 FLMKKRAGLQHTASTQFARFATGLSEKMAEFEGLNQQVELGERLL-DTTYVVCAYAKGTA 350 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 E A ++ +R G L + F + FL LPF + LK+ ++ +S Sbjct: 351 EDARHSLAEVAKIYRYAGLVLENDTFVQLPVFLAALPFAVHGKRMEDLKKLQRMKILKSE 410 Query: 438 NVANLMPLVADNPLTP--AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 + L P+ + + G+L + Q+ D F NYN+AV G SGAGK+ Sbjct: 411 AASALAPIHGEWTGSGNGRGVLLLGRQGQIMDWDNFASDG---NYNVAVVGKSGAGKSVF 467 Query: 496 IQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY--LDGE-TLRFNPFANITDID---- 548 +Q L+ S+ +GG VV D G +K+ E +GG + DG +R NPF+ ++ D Sbjct: 468 MQELVTSIYAAGGRVVVIDDGYSFKNTVEILGGTFVGFDGSVQIRLNPFSMLSAEDMEKD 527 Query: 549 ----QSAERVRDQLSVMASPNG----NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 + E V ++ MA+ ++E EG + + V W K + DV + L Sbjct: 528 EYRADAIELVTGIIASMAALGEGKQSRVEEFEEGRISRIVADVWAEKGAAGEVTDVWERL 587 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 + ++ +Q RL +++V L+ +T +G YG YF LR + V EL + Sbjct: 588 RAFAEEDQ---------RLADVVVKLEAFTRSGPYGHYFAGPAT-LRLETAFTVFELSDI 637 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 + + L V+ ++ M++TPR + +IDE W LL K+H FIE R A Sbjct: 638 KGQKVLQDVVLQIVMFLGTELMFKTPRAVPVAILIDEAWDLL--KSHATARFIEGVVRRA 695 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 R++TGA IT TQ+I D+ ++ A A NS + ++L Q A+ + Q P Sbjct: 696 RKYTGALITGTQSIDDYYNNVA---ATVCLQNSDWTVLLAQKAETIDRLVQDRRLSVSPH 752 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 + + K FS ++ N + RL +DP S A+YSS G E + + + +G Sbjct: 753 IAGQLKSLQSVKG-LFSEMGVKGPNGWFFGRLLLDPFSLAIYSSKGSTVEKINRLKDQGY 811 Query: 841 SIHEAVWQLAWK 852 + EA+ L + Sbjct: 812 TTVEAIRILVEE 823 >UniRef50_Q6MB95 Putative inner-membrane protein traC n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB95_PARUW Length = 828 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 188/870 (21%), Positives = 348/870 (40%), Gaps = 65/870 (7%) Query: 5 LEAVTQAVNSLVTALKLPDE---SAKANEVLGEMSFPQ---FSRLLPYRDYNQESGLFMN 58 + + Q + ++V L S+ + L +P S L Y Y++++ LF+N Sbjct: 1 MRSFLQKLGNIVAGLFGESPFSFSSDTAQALPSDPYPSATPLSAYLSYDVYDEDNELFIN 60 Query: 59 DTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFS 118 ++GF +E +P+ G++ + + + + L G + L + + + + Sbjct: 61 KKSLGFAIEMLPLVGSDHAAQKNIQSLFDEVLEEGESIQCLLWTDHRIDPFLNFWEEPRK 120 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRAD--- 175 G + + +R +SY P K + + Sbjct: 121 QKGGIFAKIAHQRVKTFRHHKQ------------FFPSLFRFVLSYTVPFKGDLQTNAPL 168 Query: 176 ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNY 235 I +M+ + L+ S + + +D+VG M + S +PY L Sbjct: 169 IQKMKAKKEKCLRILRALSRSARVWKPIDLMDVVGGMCQFSF-STEAVTPLWNPYQSLAS 227 Query: 236 QCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPEL 295 Q L+ + G + R S +F + PE L M ++ Sbjct: 228 QI-PRGTSLE-----IQEGQLKANRPSPLAFKSFRVVDFPEFWSLSQMQHLIGDVERDSF 281 Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYA-KWFPSVEKEAKEWGELRQR 354 + CPF L + Q + ++ +EK+ ++S K P + E KE R+ Sbjct: 282 RLLCPFYLHWAVHCPSQQLAEQKFKVREKFVEKQGQSSMFLKMVPQLADELKEIQYARKE 341 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLP 414 + G + N++ + + + E+ + FR N F L+ + + FL+ LP Sbjct: 342 IYQGAR---YVWTNLSVGIWSSPDNLVHSEEILKGIFRNNRFTLVENQAFPLAAFLSALP 398 Query: 415 FMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT--PAGLLAPTYRNQLAFIDIFF 472 + + K LK + + N +PL + T +G+L R QL + F Sbjct: 399 LSLAESV-KGLKNLNFFRTTLNRECGNYVPLQGEWYGTLKSSGILLAGRRGQLMNWNPFD 457 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 NYN+ V G SG+GK+ +Q LI + L +G V D+G + LC+ + G ++ Sbjct: 458 NDHG--NYNITVVGRSGSGKSVFMQELIFNGLGTGAKVFVLDVGRSFDKLCQALEGQMIE 515 Query: 533 G---ETLRFNPFANIT-----DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASW 584 T+ NPF +++ ++ ++ MA + L+ ++++ W Sbjct: 516 FSRQSTICLNPFTKFPLNNVNELNDCIILLKSIIANMADSINGMSSEQMSLIEESIKEVW 575 Query: 585 LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 K A + DV ++LK D + ++ +L YT +G +G YF + Sbjct: 576 KLKGCEASLTDVANWLKQHEDV-----------QARKIGRMLFPYTIDGVFGHYFEG-KN 623 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF 704 ++ V++EL L+++ L V+ LI+ I ++ + R + +DE W LL Sbjct: 624 NVDFTNPFVLIELEELKEKKELQAVVLQLLILTITDQAFLGDRKTRFYICVDEAWDLLRA 683 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 + G FIE R R++ G+ I TQ + DFDS A+AA+ NS + L Q K Sbjct: 684 N--QTGPFIETLARRLRKYNGSLIVGTQQLEDFDSYPG---AKAAYANSDWACFLPQDDK 738 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSS 824 A + + I +S L+ S HR ++D S +YS+ Sbjct: 739 TIATLKA--ESKMPEGKIQAIENLNTLHG-VYSEVLICQGKSYSTHRFWLDSFSNLLYST 795 Query: 825 DGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 DF +Q+ R++G S+ EA+ +L +K+ Sbjct: 796 QAADFSRLQKLREQGKSLEEAIEELVQEKA 825 >UniRef50_Q5NX56 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX56_AZOSE Length = 815 Score = 475 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 155/829 (18%), Positives = 311/829 (37%), Gaps = 53/829 (6%) Query: 44 LPYRD-----YNQESGLFMN-----DTTMGFMLEAIPINGANESIVEALDHMLRTKLPRG 93 LP++ ++ E+GLF + +G P+ G S+ E L LP G Sbjct: 22 LPWQYLGAEGFDDETGLFYCVSPSGERHLGATFMTTPLLGGGGSVFEKFKAALACPLPAG 81 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 + + L+ S + ++ + E+ +K P+ + Sbjct: 82 SFVQVGLLGSPDIDPYLDAYTDGKEQATGLLEKLV----RTRVKMFQDAVHKPQFKTNGV 137 Query: 154 TLRHYRVFISYCSPSKK-KSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 R +R+ + P + + + V + + +D ++ ++ + Sbjct: 138 LNRDFRLIFTVKIPCSSLPDLEERQSIRSDVTRVMEGFSSIGFQFRMLDPHGYLHLIRKF 197 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 + + D + Q D++ + + + G + + Sbjct: 198 YHMWEKPEFS----YDELIPIREQAFYPGDDIEFKENEILF---HQGSDQEFFVRVMSPK 250 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P+ + + I+ PF T DQVK E ++M + ++ Sbjct: 251 LFPKRTVFGVANLLIGDQMGGANQITEPFFFQFTAHYPDQVKKKGEVRQRHMWITQQCIG 310 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 + A WFP + + + + + L++ F K+ + A + + + Sbjct: 311 NSATWFPILGYKKEGIETFIHEIDGQGGMALEVNLSLMIFSKNRDRLARQTAS-LNSYLS 369 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 F++ + + LP A + + A L+PL AD + Sbjct: 370 TLSFDMREDKRILDFLWHNALPMNASA---DAMTRTFRTNTMSARQAAPLVPLFADYKGS 426 Query: 453 PAGL--LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 A L T R Q++ ++ NT YN+ V +G GK+ L Q +I L G Sbjct: 427 GANATSLFVTRRGQVSAFSVWDS---NTGYNVVVFAGTGGGKSFLAQLVIVDNLAEGCKV 483 Query: 511 VVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQSAERVRDQLSVMASPNGN 567 V D+G + L + G Y++ NPF +++ID+ + ++ ++ MA+P G Sbjct: 484 WVIDVGKSFFKLNRALKGDYIEFSEESQIILNPFTFVSEIDEDIDIIKATIAKMAAPEGG 543 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 LD+ L + ++A+W + + + V + D R+ ++ L Sbjct: 544 LDDYQMAALEEGIKATWDRYAHNSTVTAVAQWCMQQPD-----------PRVRDLGQQLY 592 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 +T +G+YG++F + + + VL+L L+ RP L V+ L+ I MY TP Sbjct: 593 PFTVSGSYGRWFEGEAT-IDVSNRFTVLDLLHLKSRPILQKVVLLQLMNRIATEMYTTP- 650 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 +K+ V+DE W L+D + + + IE YR R+++GA I ITQ + D S R Sbjct: 651 -GRKILVLDEAWELMD--DPLMAKAIEALYRKVRKNSGAVIFITQGVGDLFQ---SPNGR 704 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHS 807 A + NS+++I+L+Q A+ + ++ + + ++ Sbjct: 705 AIYANSAWQIVLEQRAESVDAAVASGQFSMDAFGIHQVKSLHVVPGEYSELMIKRSDSDY 764 Query: 808 SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGP 856 R DP +++S+G + + ++G E + K+ Sbjct: 765 GIVRFRPDPFMFTLFASNGEERDEAIAAIEQGADPEEVIDFYTQKRLEK 813 >UniRef50_A4JTN9 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A4JTN9_BURVG Length = 819 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 181/836 (21%), Positives = 320/836 (38%), Gaps = 56/836 (6%) Query: 44 LPYRDY-----NQESGLFM----NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 LPY+ + ES +F+ ++ +G A P+ GA++S V+ L P G Sbjct: 23 LPYKKVTVQACDPESKVFLASDGSEHYLGACFVADPLKGADDSTVDKFRSALSMPFPPGT 82 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + I L++S D ++ L E + + G + Sbjct: 83 FVQIGLLASPDADDYLDAYLEGKYHDNEVLRALALQHASLVRRGKDQALVTRSG----VL 138 Query: 155 LRHYRVFISYCSPSKKKSRAD--ILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 L R+ I+ +P + D I ++ + + A + T +DA+ ++ ++ + Sbjct: 139 LNRQRLVITIKTPCARALPTDGDIAAARETADRVQEAFKAAELETLQLDAEGYLVLLRLL 198 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 + D +N Q + + + Sbjct: 199 TKLWDHPSH----HYDETRPINEQVYFPGDAVNYDDP-----TTIKFNDGAHYAKVMSVK 249 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P+ A L M + L I+ P+ + LTL DQVK + L + Sbjct: 250 YFPKRASLAIMNHMIGDPLGLSNQITDPYYMVLTLHYPDQVKKVDWVKGRSSMLNHQVFG 309 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 A P++ + L + S V + F + + E ++ + + Sbjct: 310 PTAHMIPALGYKKHGMDVLIHDIEGKGSIVCEANFTLFLFSR-SREKLNKLVAGLQAYYT 368 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 FE+ R + LP + +K + MP++ + + Sbjct: 369 SLAFEIREDRRILEPLWNNLLPLNTS---REGIKNLFRFHTMGISHAVQFMPVIGEWTGS 425 Query: 453 P--AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 LL T R Q A ID++ TNYN V +GAGK+ L Q ++ L G Sbjct: 426 GRSGALLLVTRRGQPALIDLYESA---TNYNGVVFAEAGAGKSFLTQKIVSDYLAEGAKV 482 Query: 511 VVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN 567 D G Y LC+ + G +++ L NPF I ++++ + ++ L+ MA+P+ Sbjct: 483 WAIDAGRSYFKLCKAVKGTFVEFKQDSDLCLNPFTFIENLEEEMDILKAMLAKMAAPDET 542 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 LD L +A+ + + A + V +F D + + L Sbjct: 543 LDAYPMSRLEEAITSVYTKYGKNATVKAVAEFCLAQPDED-----------TQRLGKQLF 591 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 + A G Y ++F D +L D VVLEL L+ R +L V+ L+ I M+ T R Sbjct: 592 PF-AGGAYTRWFEGD-NNLDMDNAFVVLELSDLKGRKALQQVVLLQLMSRINYDMFLT-R 648 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 KK+ +IDE W LLD + +G+ +E YR AR+ GA + +TQ+I D + S AR Sbjct: 649 GRKKILIIDEAWELLD--DPLMGKAMEALYRKARKEEGAVLIVTQSIEDLYN---SPNAR 703 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHS 807 A NS+++ ILKQ+++ + P M+ ++ + + E+ Sbjct: 704 AIAANSAWQFILKQNSESIDGAIAGGQFKIEPYGAAMLKTVHTVPGKYSEVMVKRSESEW 763 Query: 808 SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEA 863 RL VD ++ ++S+ + + G S+ +AV Q + E A LEA Sbjct: 764 GIFRLTVDRFTQVLFSTKNDERNAIFDAIDRGDSVVDAVHQFI-DRENSEKAELEA 818 >UniRef50_A0R7Q8 Sex pilus assembly protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7Q8_PELPD Length = 816 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 167/852 (19%), Positives = 325/852 (38%), Gaps = 48/852 (5%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFM-NDTTMGFMLEAIP 70 + L + L A E+ + S LP+ Y+++S L++ D +G+ E P Sbjct: 1 MKRLTSLLFGKKGGATKREMRLLAEREKISDYLPWIAYDRDSHLYLLADDCLGYAWECSP 60 Query: 71 INGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI 130 + A E+ V L+ + +P L + + + + E Sbjct: 61 LFFAGENTVSTLEGLFGGDIPPEAVYQFILFGDSYIEPILHEYKQRKKLDHDVVELITES 120 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASL 190 +Y ++ + G + ++ +R+FIS P K D+ + +++ I L Sbjct: 121 LSDFY-RSGTSGLKNMSG----IPVKRFRLFISIKFPQKWAEGVDLNQTWSMINEI---L 172 Query: 191 QGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 GAS+ ++ + +D + N P + D + Q + L + Sbjct: 173 TGASLHPVCLEPELLLDWGRRLFNDKPSA---NNSLYDENIPIRKQML-LGTKLTRNENT 228 Query: 251 LTLGLRENGRNSTARILNFHLARNP---EIAFLWNMADNYSNLLNPELSISCPFILTLTL 307 L + + P E + + L++ PF+ +T+ Sbjct: 229 LNVDGKI--------FRCITPKTWPHEIETLSINKLFGGIKGLMSDGEQFKTPFLYCMTV 280 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFL 367 ++E Q ++ + K + K+ + P++E+ E+ L G+ + + Sbjct: 281 LMEPQ---KNKLHTKCNFILKQQG--VGSFAPALERTKGEYLWAVDELERGKKFLRI--I 333 Query: 368 NITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 D+ E + NGF + R + FL LP + Sbjct: 334 PALWVYSDDEWKVNESLTRAKVIWESNGFVMQEDRGILVPLFLASLPHGF-YNVGNNAGY 392 Query: 428 AGVVQRAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCG 486 + +A +P D +L + +L D+F +G N+N Sbjct: 393 LERDFIVPAETIAATIPCQGDFSGFGSPSMLLVGRKGELFGFDLFAKGA--DNFNGFCVA 450 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRF---NPFAN 543 SG+GK+ L+ ++ G + D+G K L + Y++ NPF + Sbjct: 451 GSGSGKSVFANSLLCNMRAEGNIIRIMDIGRSMKKLAKMFNARYMELSEDSMDNLNPFTH 510 Query: 544 ITDIDQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 ++D + + + + ++ MA +G E+ L+ QAV ++ + N A I V +L+ Sbjct: 511 VSD-ETALQTIIPVVTQMAFSSGASMPSELDVNLIGQAVEWAYANEGNDAGITTVFQYLR 569 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 + +ES IR D++ L ++ +G Y +YFN +MVVLELG ++ Sbjct: 570 DFKKLVG-SESFEIREAADKLAFNLAHWSGDGVYAKYFNGKATFDIASDEMVVLELGSIK 628 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 +L V +I + Y + K+ ++DE + L +H G IE YR R Sbjct: 629 SLANLYRVVTQLVINEVALDAYHSSGKDKRFILMDEAHQYLGESSHIKG-TIEGFYRMLR 687 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 +H+ I+Q+I+D ++ + + NS+YK LK + ++ K + L + Sbjct: 688 KHSAGCFVISQSILDL--NRFGAVGEVIFNNSAYKFYLK--SDDYEKAHNLKLLDYDNFT 743 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLS 841 ++ K +S + RL +DP S Y+SDG + ++ GLS Sbjct: 744 MALLKSVTTNKPN-YSEIFMHTPFGKGLGRLVLDPFSYYAYTSDGEEVAEIESMVDGGLS 802 Query: 842 IHEAVWQLAWKK 853 +A+ ++ K Sbjct: 803 YADAIRKMVAKY 814 >UniRef50_Q1RJF1 Conjugative transfer protein TraC n=35 Tax=Rickettsieae RepID=Q1RJF1_RICBR Length = 862 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 191/871 (21%), Positives = 372/871 (42%), Gaps = 99/871 (11%) Query: 37 FPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTK--LPRGI 94 + ++ Y Y++ES LF N ++GF+L P+ G + + L++ LP G Sbjct: 30 RERLAKHFVYESYDEESSLFFNRASVGFVLLGWPLVGTSLQAQGEIAEFLKSDENLPAGS 89 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 I ++ S + + ++ + + ++ L + Sbjct: 90 SFQILMIGSDHIREYLDNWQ------------LHRKGTIFAELSSRRTKFLEQKAKAEGN 137 Query: 155 LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMIN 214 ++ + IS P+ DI EM ++++ + + + T V+A + V + Sbjct: 138 IKDVVLLISVTIPT---LTIDINEMIRRREVLQDTFKSIGLATYNVEATLLLKFVRLIF- 193 Query: 215 HNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARN 274 + +P +L+PY L+ Q + +F L + DY++L + ++ + Sbjct: 194 GWREEEHP---ELNPYEILSEQILPGNFSLYEKEDYVSLNDNQI-------FISLEAGKR 243 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV-EDQVKTHSEANLKYMDLEKKSKTS 333 P L M N L + I F++ L + +QV + A K LE+ Sbjct: 244 PAEWLLSAMDLFLGNELRRDEYIRSNFLIHFGLQIVPNQVIAKTAAITKREALERNINAG 303 Query: 334 YAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRK 393 K+FP++ EA++ L SG VV+ LN+ + D A + R+ Sbjct: 304 MGKFFPNLASEAQDLAGAVACLQSGD-RVVNIHLNVIMW--DKKNKAKGAASQFCSQLRR 360 Query: 394 NGFELISPRFNHMRNFLTCLPFMA----------------------GKGLFKQLKEAGVV 431 +G+ + +++H+ L LP +G+ L G Sbjct: 361 SGWYFVPCKYDHLAVVLASLPMQLVEAAPNSLVGKFNRFNNIFNKKTRGVGIALSNLGRG 420 Query: 432 QRAESFNVANLMPLVADNPLT--PAGLLAPTYRNQLAFIDIFFRGM-----------NNT 478 + + L+P++ + G+L R Q+ + F + N Sbjct: 421 IKTIASESKVLLPIIGEWKGDLSSPGMLLTGRRGQIMYWSPFGSALIGSNLYSTAATPNE 480 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---T 535 N+N+ + G G+GK+ +Q L+ SVL +GG V D G +K C +GG Y++ + Sbjct: 481 NFNLCIAGVPGSGKSVFMQELMLSVLGTGGKVFVLDYGRSFKRTCLLLGGNYIEFDVKNP 540 Query: 536 LRFNPFANIT------DIDQSAERVR---DQLSVMASPNGNLDEVHEGLLLQAVRASWLA 586 + NPF+ I I+ A+ + L+ MA+P +++ + +L +A+ A W Sbjct: 541 ISINPFSEIPADGSEGSIEAQADFLASFPSILATMAAPQYGTNDLQQPMLQKALIAVWQE 600 Query: 587 KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL 646 K N+ I D+ D+L + S E+ +L +T +G YG++F+ + L Sbjct: 601 KGNKVEITDIADWLLKREE-----------SYAQELGNMLFPFTRDGQYGKFFSG-KAKL 648 Query: 647 RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 +A +VV+E L P+LL ++ +I++I M + R L +IDE W+LL K Sbjct: 649 SLNADIVVIETDHLRSSPALLAVIVQIMIVHINQSMVKGDRKRPFLIMIDEAWKLLSGK- 707 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 + GEFIE+ R AR++ G+ TQ + D+ ++ S+ A A+ NSS+K+ILKQ+ + F Sbjct: 708 -RSGEFIEEAGRIARKYNGSITLATQQLTDYFREEGSA-AEKAFENSSHKVILKQNPESF 765 Query: 767 AKYN---QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH-RLFVDPLSRAMY 822 +L + +++ + +S + + + RL +DP + + Sbjct: 766 KAMRASPKLAGFVDEDWKLNLLQSIHSNPP-HYSEAAIYGPSVNGVVARLMLDPFTLMLT 824 Query: 823 SSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 S++ D++ ++ + G+S+ +A+ + ++ Sbjct: 825 STNARDYQAIEDRMIAGMSVTDAINNILDER 855 >UniRef50_Q19NS3 TrhC n=11 Tax=Enterobacteriaceae RepID=Q19NS3_ECOK1 Length = 893 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 175/909 (19%), Positives = 334/909 (36%), Gaps = 111/909 (12%) Query: 35 MSFPQFSRLLPYRDYNQESGLFM-NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRG 93 ++ Q +P D + F+ + +GFM P G ++ + L M + P Sbjct: 11 LNRHQLGGFIPVYDQLAGTHYFLIDGNRLGFMFICNPSPGVFDNQQDVLAEMFKMDFPTD 70 Query: 94 IPLCIHLMSSQLVGDRIEYGL-----REFSWSGEQAERFNAITRAYYMKAAATQFPLPEG 148 I L + + ++ R +A+ N YY ++ Sbjct: 71 TVCQISLTALPDLTLQLSAWSAVRGGRMTGNDKLKADLLNGYQLDYYDRSMHKPLKPD-- 128 Query: 149 MNLPLTLRHYRVFISYCSPSKKKSRADIL--EMENLVKIIRASLQGASITTQTVDAQAFI 206 + L LR ++V+IS P + ++ +++L + + L + VDA+ ++ Sbjct: 129 -HDNLMLRDFQVWISLSIPLQSALPTELEHSRIDSLYSELVSKLITIGLHPFKVDAENWL 187 Query: 207 DIVGEMINHNPDSLYPKRR-QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + +++N +S + + ++ LN Q V ++ + + + + Sbjct: 188 YCIDKVVNPGKNSRWAEGFIDVNTMKRLNEQVNVPGRKYTVTENHFSSVTQSDDESEHRY 247 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK-THSEANLKYM 324 + + PE M + N ++ +I PF++T T+ D +K + K + Sbjct: 248 FKQLSVVKFPEYVNFGCMYELVVNWMHGRKTIFSPFMITQTVQFADPLKLSKENVRYKAI 307 Query: 325 DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV-VSYFLNITAFCKDNNETALEV 383 ++ S S + P + ++ + + L G + + ++ +TA Sbjct: 308 TNKQASIPSVVTFCPRLRDMDNDYMAVTRELEDGAKLLRGYLTFTVMGSNANSVQTA--- 364 Query: 384 EQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLM 443 D+ + + ++ ++ F +F++CLP L + VV A++ Sbjct: 365 ANDLKSFYLESRVKVADDSFIVFPSFMSCLPMCNDPKTIFDLDRSEVVSNT---GAAHMT 421 Query: 444 PLVADNPL--TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 P+ L + QL +DIF +YNM + TSGAGK+ LI Sbjct: 422 PIFGPWKGNTDRPVLSLVSREGQLMGLDIFKTSA---SYNMVIGATSGAGKSFWTAYLIN 478 Query: 502 SVLDSGGF----------------------------AVVFDMGDGYKSLCENM-GGVYLD 532 + L +G V D+G Y+ + E ++D Sbjct: 479 NYLGAGPRSNNLVHYRSTFKHFLENEYPDDDPDGAQVFVVDVGRSYQGIAEQYTNSQFID 538 Query: 533 GETL---RFNPFANITDIDQSAE--------------------------RVRDQLSVMAS 563 NPFA +TDI + + V +QL +MAS Sbjct: 539 FGKTPDFTLNPFAFLTDITVNDDVFNEAPEFTGESTSNDAEKDKVAQTIMVLNQLKIMAS 598 Query: 564 PNGNLDEVHEGLLLQAVRASW---LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 G +D+ + ++LQ + + I K D R+ Sbjct: 599 EKGLIDDYQQSVMLQLIAEEYQESRKSGRTGSITGFALRCKKHEDK-----------RIK 647 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIEN 680 ++ L + G YG F P + D++ +VLEL L+ P L V+ S+I ++ Sbjct: 648 DIGEQLGAWCEGGIYGHRFTDTLPPINFDSRFIVLELEELKGTPHLQTVVLMSIIQAAQH 707 Query: 681 RMYRTPRNLKKLNVIDEGWRLL---------DFKNHKVGEFIEKGYRTARRHTGAYITIT 731 M+ ++L ++DE W + + N F+E +R R+ A I IT Sbjct: 708 AMFIKKDGRRRLFILDEAWEYIRPDNSSGAGNQSNQFFSSFLEAAWRRFRKTNCAGICIT 767 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 Q+ D+ + SS RA NS +KII+KQ + + + + Sbjct: 768 QSFEDYFT---SSVGRALTANSPWKIIMKQEKESIEAMKANKYFSTSDAEYERMKNIRTV 824 Query: 792 KDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF-VQQKRKEGLSIHEAVWQLA 850 K + FS L++ EN RL+VD +++D D + + +E S EA+ L Sbjct: 825 K-KVFSEMLVRFENFQEICRLYVDRKMELCFTTDSADRSKLWEIQSRENCSYGEAIEILY 883 Query: 851 WKKSGPEMA 859 ++ +A Sbjct: 884 AQEVAAGLA 892 >UniRef50_Q4HPB0 Conjugative transposon protein TraG, putative n=4 Tax=Campylobacterales RepID=Q4HPB0_CAMUP Length = 837 Score = 431 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 180/880 (20%), Positives = 351/880 (39%), Gaps = 75/880 (8%) Query: 7 AVTQAVNSLVTALKLP--DESAKANEVLGE-MSFPQFSRLLPYRDYNQESGLFMN-DTTM 62 ++ ++ + +K P D S+ + + + +FS LPY Y+ + ++N D + Sbjct: 2 SLKDYFSNQINQIKEPFEDISSLQTNIWEQNLKRYKFSDFLPYMSYDDKEKYYINNDNSY 61 Query: 63 GFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYG-----LREF 117 G + P ++ ++ +L KLP + + L + + ++EY R + Sbjct: 62 GAIFICSPRIMMGDTTATTIEEILS-KLPDDMFIQFTLFGLKNINQKLEYYRSIHKQRAY 120 Query: 118 SWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADIL 177 + + +Y T+ + L+ Y + IS S K Sbjct: 121 KENNTLLHKAVDEMTEFY----YTKTKESPSTTMTSYLKDYYLLISLKSDKKDD------ 170 Query: 178 EMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQC 237 + +R L + Q ++ ++ E+ N N + R D Y LN Q Sbjct: 171 -ILTFKLTLRNILSSNKFSPQPLEPSVLKPMLWEIFNPNHNLRDIPR--YDEYCYLNRQL 227 Query: 238 VEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPEL-- 295 + + + DY+ + ++ P A L + + ++ L Sbjct: 228 IHADTAICIHDDYMECDKKTY--------ISLIPQSFPNSANLSEFGEKLGDNISRTLDT 279 Query: 296 -SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQR 354 F +T + + + + + + L +K ++ + F +V +E+ E L R Sbjct: 280 NQFKDTFFITCSAMRLPKKRAKQVSKNHTIILSQKFSETFFRKFAAVREESVE---LLDR 336 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG----FELISPRFNHMRNFL 410 + + S+ ++ +N+ +N E A + + I++ + K G L H NF+ Sbjct: 337 IDLRKESLYAFDMNVII-SGENYEEAEKNARSIISYWNKGGEHKALILCEALGIHQLNFI 395 Query: 411 TCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDI 470 LP K + + S ++ +PL AD ++ + R Q+A +D+ Sbjct: 396 ASLPMGINKEYVFDI--TAKYRSMFSDQISQFIPLEADYKGVEPNIILFSRRAQIAGLDL 453 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 F +NTNYN + TSGAGK+ L+ L + G + D + + LCE + G Y Sbjct: 454 F---SSNTNYNAYLVATSGAGKSVLLNMLAFNSYARGDRVFIIDQDNSFLKLCETIDGQY 510 Query: 531 LDGETL---RFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVH--------EGLLLQA 579 + + L FNPF++I + Q E + +++ + +E + L Sbjct: 511 VALDPLKPMSFNPFSDIQNEAQLIEELEYLSALIYMLGSSKNESESKKHEKLVKNALQDL 570 Query: 580 VRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 +R + K N I D+ + + D R + L + G Y ++ Sbjct: 571 LRELFKEKGNALEITDIKEAFIKSEDI-----------RFKDFANQLGTFCKGGIYEKFL 619 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKL-NVIDEG 698 + + + +V E GLE L ++ LI +I MY +P K+ ++DE Sbjct: 620 SG-KCEFNIKKEFIVSEFKGLEGHDDLRDPLIMLLIYHINQLMYMSPDRNSKIQIIVDEA 678 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA---AWGNSSY 755 R L KN K+ +FIE+ YR AR++ G+ I TQ D + K +RA NS++ Sbjct: 679 HRFLG-KNPKMDDFIEQLYRRARKYGGSAILATQGFDDIYNAKEGGLSRAGITIVNNSAW 737 Query: 756 KIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 KI +KQ+ + + ++M+ K ++ +F++ E+ +RL +D Sbjct: 738 KIFMKQTETSVNMLLKSEVFNLNEIDKEMLRSISTTKGEYSEAFIMTPEDVKLPYRLVMD 797 Query: 816 PLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 + ++D D +++ GLS+ EA+ QL ++ Sbjct: 798 RYFYYLTTTDPKDKAKIKELTDSGLSLEEAISQLIQREKQ 837 >UniRef50_B7J837 Type-IV secretion system protein TraC n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J837_ACIF2 Length = 866 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 148/855 (17%), Positives = 315/855 (36%), Gaps = 56/855 (6%) Query: 42 RLLPYRDYNQESGL-FMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHL 100 P+ +++ L FM +G +L + GA+ES+V+ L L P G + Sbjct: 19 DFFPWLAVDEKKKLIFMERGYVGAILMCNTLYGADESVVQELSSALSIDFPAGTIIQAVN 78 Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAI-------TRAYYMKAAATQFPLPEGMNLPL 153 + D +E L + + + + A Q + + Sbjct: 79 WNVPDSMDILERFLDRRRGNSDDKGLSDQQKTLINGTAENIHRYFEAAQNRNRVFQDSGV 138 Query: 154 TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI-TTQTVDAQAFIDIVGEM 212 L VF + P + D ++M + + I + ++ + VD + + M Sbjct: 139 PLTKNLVFFAIKIPVAEFPTDDEIDMVD--EKIGSFASTINMMSPYRVDHHIALSLWRRM 196 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 ++ + + D + L Q ++ YL++ + ++ I + Sbjct: 197 LHLRHE----WEEEFDENALLRDQITGPGDAIEDHESYLSVDHGDGEKD---YISVLSIK 249 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 + + L ++ P L T+ + DQVK + + +S Sbjct: 250 EFSRPINMLATNFLMGDPLGRGTQLTLPAALVWTINIPDQVKKRRAITNESTLINWQSGK 309 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 W P + + + L + + +G +++ + D +T ++ Sbjct: 310 RMMSWSPKLRLKKEGIDFLMEAINTGDNAL-EMAFTALLWGPD-AKTVKNASGSFISHAA 367 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 K GF ++ + + FL +P + + + + + P+++D Sbjct: 368 KAGFVMLPDKQIALPMFLNAMPLFPD---RESMAMTFRYKSVGTTHAVAACPVISDWQGN 424 Query: 453 P----------AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS 502 +G L + R L DIF + N + G + +GK+ Q L+ Sbjct: 425 NMEDSRLSPACSGTLLVSRRGHLMVFDIFASNSGH---NFVLAGMTRSGKSVTAQQLVMD 481 Query: 503 VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQSAERVRDQLS 559 L G V ++G ++ LC+ GG ++D + NPF + +D + + Sbjct: 482 QLSVGAQVWVIEVGRSFEKLCKLFGGDHIDLRPEMDVGLNPFTVVGVLDDEISELTAIIG 541 Query: 560 VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 M SP G L + + A+R+ + A DV +L ++ R Sbjct: 542 TMISPRGELSDEDLSTVAMAIRSVYGKAGREATPTDVQAYLVAQDNN----------PRA 591 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 M +++++T NG +G++FN+ + ++ V LEL L+ RP +++ V+ ++ I Sbjct: 592 IAMGKMMNEFTLNGAHGRWFNAPMNVSLNGSRFVNLELMELQRRPQVMLVVLMQMMFAIG 651 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 + +++ +DE LL+ + +F+E R +H GA Q + D Sbjct: 652 KEISSATDKRRRILFVDEASVLLEIQT--ALDFLEGLARRVAKHQGALGIGIQALSDLYK 709 Query: 740 DKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSF 799 ++ + R +++ ++++Q+A A+ P M+ K+ ++ Sbjct: 710 NEKT---RTISAQTAHFLVMRQNADSVAQLENNKQFVIGPSGLAMMKTVRKTKE--YAET 764 Query: 800 LLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMA 859 L E + RL +DP R ++++DGP+ E V + + G+ A+ Q + Sbjct: 765 FLYSEESMAIGRLKLDPYRRVLFATDGPEKEEVVEAMRNGVDPDAAIRQFLAQHPEFSTG 824 Query: 860 SLEAWLEEHEKYRSV 874 + + E Sbjct: 825 EYSGEILDSEDAEEA 839 >UniRef50_A0L303 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L303_SHESA Length = 894 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 162/911 (17%), Positives = 326/911 (35%), Gaps = 108/911 (11%) Query: 25 SAKANEVLGEMSFPQFSRLLPY-RDYNQESG----LFMNDTTMGFMLEAIPINGANESIV 79 N + ++S ++P ++ E G + +G P G S + Sbjct: 1 MTTVNNWKNSLGIEKYSSIIPILDEFVSEEGEHLGYILEGGYLGVTWLCPPSGGYGASTI 60 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQ-----AERFNAITRAY 134 LD + + P G L L++S + ++ + Y Sbjct: 61 STLDSIFKKVYPEGTVLQFSLVASDDLVTVLDNYRHCRGKRNRFDTVIDNDNMTEYMVDY 120 Query: 135 YMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKK--SRADILEMENLVKIIRASLQG 192 Y A T P + +P LR++ V+ S P KK S ++ + ++ ASLQ Sbjct: 121 YKALADTSIPSRDMEGVP--LRNFEVWASIKVPIKKAMPSTEEVEDFVDMANNHEASLQQ 178 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLD-------PYSDLNYQCVEDSFDLK 245 + + I+ + + N +P++++ + ++D + Q +E ++K Sbjct: 179 IFGVATKMQPEILINRLQMIHNPSPNAVWRRGIKVDGRQGCYRSSQPIRAQLLEPGTEVK 238 Query: 246 VR-ADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELS-ISCPFIL 303 V +DY+ + + + I + + P+ + + + L + I F++ Sbjct: 239 VDGSDYMAIKAEDGSK---RFIQSVSIKEFPDSIYQGTLHLMTGDWLKGDDGAIPGNFMI 295 Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 L + + + + + M ++ + +A+W S++ +++ L ++ Sbjct: 296 NLVVEMSPKKVAKDYSKRRLM-AKQIGEGPWARWISSLKYGLQDFEYYEHYLEREKAQHC 354 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + LN + ++ + ++ + +L LP + Sbjct: 355 RFHLNFQMWGP-TLKSVKNSTKKLITRMEGFSWSAGVDSLIGRFTWLNGLPMCTSSEVSS 413 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTP---AGLLAPTYRNQLAFIDIFFRGMNNTNY 480 ++ S V +P+VA P L QL D NY Sbjct: 414 FIERFDF---LPSNLVKFFVPMVASWPGNAVRHPVLTYIARDGQLITFDPLKSDS---NY 467 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDS-----------------GGFAVVFDMGDGYKSLC 523 N+ + TSGAGK+ LI +L + GG + D G Y Sbjct: 468 NIFITATSGAGKSVSANYLIEGLLSTGENRYPDALGNIHGDPDGGRVFIIDSGRSYVKTT 527 Query: 524 ENMGGVYLDGET-----LRFNPFANIT----DIDQ-------------SAERVRDQLSVM 561 E G +++ PF +I D D+ E + + L +M Sbjct: 528 ELYAGQFVEVMPDNRFAFNLCPFKSIDESQKDTDEGVVDSDANNYLGAQGEMLLNVLKLM 587 Query: 562 ASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDE 621 A P G+ + + + W K IDD D R + + Sbjct: 588 AFPLGDCNSYQYSAMSVLLMQLWNEKGRETSIDDFADACAKHP-----------REEVRQ 636 Query: 622 MIVLLDQYT--ANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 + L + G FN ++P ++ + +VVLEL GL L + I I+ Sbjct: 637 ISDQLTPWCYLRGGQNSWMFNPNKPPIQFEKDLVVLELDGLNGSDQLKAVCIMLCIQRIQ 696 Query: 680 NRMYRTPR-NLKKLNVIDEGWRLLDFKNHK----------VGEFIEKGYRTARRHTGAYI 728 M+R + ++ K ++DE W L + +F+E G+R R++ + Sbjct: 697 QEMFRHDQLHIVKAFILDEAWEFLKENKGVDEQTRQVLQTLAKFLESGWRRFRKYNSLGV 756 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 I+Q++ D + S A A NS++ L Q+ +E A+ N+ +F+ ++ Sbjct: 757 CISQSMKDANE---SPAGIAMASNSAHLFYLMQNGEELARLNK--EGKFIEQDYLLLRNI 811 Query: 789 GAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRK-EGLSIHEAVW 847 + +FS LL S RL++ YS+ + + ++ K +G+ + A Sbjct: 812 KTVRP-FFSEVLLCSGGTKSVGRLYLPRAKALTYSTAPDEKKQIEIMMKDKGVDMFTA-C 869 Query: 848 QLAWKKSGPEM 858 Q+ ++ G ++ Sbjct: 870 QMIAEREGKDL 880 >UniRef50_B0RL05 Type IV secretory pathway VirB4 component n=2 Tax=Yersinia RepID=B0RL05_YEREN Length = 857 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 158/858 (18%), Positives = 314/858 (36%), Gaps = 58/858 (6%) Query: 26 AKANEVLGEMSFPQFSRLLPYRDYNQE----------SGLFMN-DTTMGFMLEAIPINGA 74 A+ +L S LP+ Y +E S F N D T+G++ E P+ Sbjct: 19 TTADNILDLNDRDSLSSFLPFVSYKEEIETESGEKIKSKAFFNIDNTIGWIWELTPLPFV 78 Query: 75 NESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAY 134 E + L ++++T P+G L + D ++ G+ N + Sbjct: 79 GEDQLGKLHNIVKTHYPKGTVAQWILYPDHNIDDILDEY-AACRVQGDPITDMNVRNTSQ 137 Query: 135 YMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS 194 Y++ A P+ +P+ R++RVF + + E+L+ I A Sbjct: 138 YLRNGAENGIHPQMNGIPV--RNFRVFYTIKCEEMIR--------EDLLSSIEQIFDTAG 187 Query: 195 ITTQTVDAQAFIDIVGEM-----INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 + + + A I + E D P +Q+ + ++ + D Sbjct: 188 MAPRRIGATELIRWMSEFFCGKKFTGEYDPERPLAKQMMSNDPAYDRSFDNGGHHEALQD 247 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 + R T N ++ + Y +++ I PF+ TLT++ Sbjct: 248 FSVTPNILGHRYGTCLFPNVIPQKDNNPLRTNELFGGYKGVIDDRGQIKYPFLYTLTIIY 307 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 + ++ K + A ++++ E+ +++Q L G +YF+ Sbjct: 308 ---DELQTDIANKASQTMFQRVG--AGLVFALKERINEFSQMQQTLAQGGD--FAYFIPQ 360 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 + + + + + FEL+ +LT LPF + LK Sbjct: 361 LWVFGKTKKDVRAAVSEAKDLWGNHKFELMPETNMSKVMYLTALPFGF-YNIDSNLKNMD 419 Query: 430 VVQRAESFNVANLMPLVAD-NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 A+ N+A +P+ D + Q+ +D+F ++N V + Sbjct: 420 RFFYADYENIARFLPVQGDFRGGGKPVQTYIGRKGQIIGLDMF--DKRVNSHNFYVVAET 477 Query: 489 GAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI- 544 G GK+ L+ L+ S G + D+G YK L G Y+D + + NP I Sbjct: 478 GGGKSFLLNDLLDSYASCGAKIRITDLGASYKKLTHIRKGRYIDFALDKPMCMNPSDFIA 537 Query: 545 ---TDIDQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDF 599 D++Q+ S A + EV LL QA AS + +DD++ + Sbjct: 538 KDAEDLEQNIAAAVLIYSSCAYSFTGQTVTEVEANLLDQACHASHRKGNQESGVDDIIAY 597 Query: 600 LKNASDSEQY----AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 L++ + A + I ++ + LL+ + +NG + ++F + V + Sbjct: 598 LRSGEWKKGQEISVAAAQEIENQAQRLAFLLNNFGSNGQFKKFFVGKSEFSISQDEFVCV 657 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN----HKVGE 711 +L L+ + L ++ ++ + +Y + R+ K + +E ++ + + Sbjct: 658 DLEKLKSQKQLFFPMIMQVMNAMTQDLYLSDRSQKSFILFEEIASMVKQQGNISMDGLAS 717 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 +E+GYR AR++ GA+ + Q+ + D + A N+ +K L+ A Sbjct: 718 MVEEGYRRARKYLGAFGIVLQSPL--DLLLLKGLGQVAQANAPFKYYLESKMYAEAVSKG 775 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 + P ++ A+ + + + RL VD + +SDG D Sbjct: 776 VLPGIKGGFPLTLLESVKNARPR-YGEVFIDSPLGMGVARLCVDKWRYWINTSDGDDVAQ 834 Query: 832 VQQKRKEGLSIHEAVWQL 849 + G +A+ QL Sbjct: 835 YNTLIQRGFQPVDALRQL 852 >UniRef50_Q1NGT3 Sex pilus assembly protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT3_9SPHN Length = 839 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 155/858 (18%), Positives = 289/858 (33%), Gaps = 70/858 (8%) Query: 21 LPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMN-DTTMGFMLEAIPINGANESIV 79 + +S +S LP + +E F+ D G E +P + Sbjct: 7 RHGGGMTFERLRQSVSRDAYSDFLPMVAWVEEEDAFLCIDDGWGQAWELVPSAYLFAHVH 66 Query: 80 EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAA 139 +AL +L G + +H + L+ D ++ L S + TR Y++ Sbjct: 67 QALLGLLNIHFAPGTVVQLHCFADPLIDDALDAFLDLKSRPDPLIQASARRTR-DYLREG 125 Query: 140 ATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQT 199 G + LR++R+ +S + + +L + I L I Sbjct: 126 TQGLDALHG----IPLRNFRLLLSIKTRKPLGA--------DLRRQIEEQLSKLGIA--R 171 Query: 200 VDAQAFIDIVGEMINHNPDS---LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR 256 + +A + + N + ++ + + P + Q ++ DL L LG Sbjct: 172 LAPEALVTFYRRIFNGVFSAAPGVFAQGSEDMPARPVRKQLIDAGPDLVFDGPELFLG-- 229 Query: 257 ENGRNSTARILNFHLARNPEIAFLWNMADNYSNL---LNPELSISCPFILTLTLVVEDQV 313 + I PF+ TL ++ D Sbjct: 230 ------DQVARCLTPKSPARRVTAERCNRLLGGMRGASEDSDQIGGPFLYTLNILF-DHS 282 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 + + +K + + + V K+ +E G + +G S VS I F Sbjct: 283 SFEIHKRAQILSAQKAAGS----FAVEVGKQIEEIGWVLDE--AGNSRFVSVIPVIWVFG 336 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT------CLPFMAGKGLFKQLKE 427 +D+ + A E+ + + ++L LPF Sbjct: 337 RDSAQ-AREMAARAKRLWESEPLPWM----MQEESYLNPVLLPMALPFGFYPDRRTVRML 391 Query: 428 AGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 + LL + QL +D+F NYN V Sbjct: 392 ERDLPMPAKAAALLAPVQTDFRGGGRPALLYAGRKGQLITLDLF--DPRINNYNFIVSAE 449 Query: 488 SGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFAN-- 543 SGAGK+ L+ L + G + D+G Y LC G Y+D E L NPF Sbjct: 450 SGAGKSFLLNNLCQQYYAQGALIRIIDIGGSYAKLCTLCSGRYIDIGEEHLVLNPFDMGF 509 Query: 544 ITDIDQSAERVRDQLSVMASP-----NGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD 598 D D + ++++A + LL AV+ + + A ID V D Sbjct: 510 ALDGDDRQSAISMAVAIVAEMAHAATRKGVSTSEWNLLKSAVQWTIDSGRAEAGIDAVRD 569 Query: 599 FLKNASDS--EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLE 656 +L + + E+ L + ++G YG YFN + VVLE Sbjct: 570 WLGAYPAYATSDLDKVDHLIPAARELAFNLRDFASSGAYGHYFNGPSTFDISADEFVVLE 629 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK----VGEF 712 L L+ P L ++ ++ + +Y + R+ + + DE + + + + + E Sbjct: 630 LERLKAMPDLFNVIVMVVVNAVTQELYLSARDRPRFVLCDEAAQFMTRTDGQDLSRLAEV 689 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 +GYR AR++ G++ + Q++ D + N++ + +L+ + + + Sbjct: 690 FGQGYRRARKYQGSFGVVLQSMNDLL--LFGGIGQVILENAATRFLLQ--GSTYDRAVEN 745 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFV 832 + D++ K +S + RL VDP S + +S + Sbjct: 746 KILDYSGFVLDLLKSVRNNKP-HYSEVFIDSPLGLGIARLVVDPFSYWINTSAPQEVAAF 804 Query: 833 QQKRKEGLSIHEAVWQLA 850 + + + G S EA+ LA Sbjct: 805 EARLRSGRSPLEAICDLA 822 >UniRef50_D0Z4T2 IncF plasmid conjugative transfer pilus assembly protein TraC n=4 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T2_LISDA Length = 692 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 175/691 (25%), Positives = 298/691 (43%), Gaps = 54/691 (7%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRG--IPL 96 + LPYR Y+ ESGLF N +T+GF + + GAN+ +V AL+ ++ +LP G Sbjct: 23 HMHQELPYRYYDDESGLFENQSTLGFGKKLNVLGGANDELVAALNELV-MRLPEGKNWDF 81 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 L VG I+ + S G E+ Y AA + G + L+ Sbjct: 82 QFVLTGDNQVGHIIDSNYEQASVRGGIVEKIAQNQAIYAHYAARNGYNTKLGPSYRFDLK 141 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN 216 +Y S+AD + +L + + I Q ++ ID V + +N N Sbjct: 142 NYNASFFCT------SKADRETVSDLKTTLDYAFVQTGIDHQPIEPHDLIDNVSQALNFN 195 Query: 217 PDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL--GLRENGRNSTARILNFHLARN 274 PKR + L+ Q +E + + Y+ + R++NF L R Sbjct: 196 SARNTPKRPHYNEDELLHSQMLELDSEFLIHKKYIESRCSFAHQDEVAHTRVINFTLRRL 255 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 P L++ ++ ++L N ++ CPF ++ +E K + K +L K + + Sbjct: 256 PSEFRLYSFSNCLASLRNAANALRCPFRISCNFQIEPTGKEKVKNEGKIRNLSKWAHSPM 315 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 A + P+ +KE +E EL+ + + S IT F N E F + Sbjct: 316 AIFIPTAKKELQEREELQDAFLREECKIASMVFTITLFS--NKENMKADMASARGVFSEA 373 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 G ++ + L LPF + ++AG V++ ++ N+ N P+VA+ Sbjct: 374 GLPIVEADMIQGQTLLASLPFNM-IDFYDDCRKAGRVRQIKTSNLVNFFPIVAEYKRIMG 432 Query: 455 GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD 514 G+L PT R+Q+++ D F M+ NYNMA+ G SG+GK+ + Q + RSV + GG + D Sbjct: 433 GMLLPTMRHQISYFDPFN--MSTDNYNMAITGVSGSGKSFITQNIARSVFERGGKVWILD 490 Query: 515 MGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSA----------------------- 551 GD YK + M GVY+ ++ NPF +I ++Q A Sbjct: 491 KGDSYKKFTQTMSGVYMTAGSVFLNPFTHIATVEQKAGISFSEASNLKPSEGHDDDDVHP 550 Query: 552 -----ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 + ++ MA+PN +L++ + L A+ +W + ID V + L Sbjct: 551 LASILGDITGLIASMAAPNTDLNDTLDSALSDAILRAWDRHKQNTLIDHVQEALFEL--- 607 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 A+ R+ ++ L++Y +G YG FN L D + +EL G D + Sbjct: 608 ---AKERDDDRRISDLGHQLNKYCTDGIYGDIFNKPS-QLDPDVHLTTIELEGFTDN--V 661 Query: 667 LVAVMFSLIIYIENRMYR-TPRNLKKLNVID 696 L V+F+L++ I MY R + K+ +I+ Sbjct: 662 LRPVIFALMVSINQAMYLAGERRIPKVCIIE 692 >UniRef50_A9AU11 Type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU11_BURM1 Length = 860 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 163/861 (18%), Positives = 300/861 (34%), Gaps = 67/861 (7%) Query: 41 SRLLPYRDYNQESGLFM------NDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI 94 S +L Y +S L + +G + P+ G + ++ + +P Sbjct: 14 SDILNIETYTSDSNLVISKAPGAERPLIGAVYRMSPLAGGGGEFSTVVQNVFK-AVPDQS 72 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + + L+ D + L+ + G + Y + A+ +LP Sbjct: 73 VIQVTLVIHPDH-DAPDTYLKGKLYGGPVVQDLIKRQADLYRRGLASGEL----PDLPGI 127 Query: 155 LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT-TQTVDAQAFIDIVGEMI 213 + V++S P +K + + +L + +++G ++ + + ++ Sbjct: 128 NKRT-VYVSLAVPHRKADDEAVEKSASLQQEFFTNMRGCGFHDVVQLNINQLVGVYRQIT 186 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLAR 273 N + P +LDP DL YQ R ++ N + + Sbjct: 187 NIYEPATVP---ELDPTLDLRYQVFGPDQTFDFRDPHV------GEINGNTYCTTVTVKK 237 Query: 274 NPEIAFLWNMADNYSNLLN-------PELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 PE F M N I P I+T T+ V +Q + + Sbjct: 238 YPERPFHGIMNLLSGAPFNSGSVREGGGQRIEGPCIITTTVRVANQRREWTRVESAIRSR 297 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 + + + E++++ + V N F +D +E A+ Sbjct: 298 RQHQPLPIKLGVEDTPRVLADLEEIKRQCAEDGTKFVYVSTNAFLFGRDRDE-AVRAGAS 356 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + + K GF+ + LP + L S V L+P+ Sbjct: 357 VKGTLDKLGFDGRDVVATGLVRLAQTLPLNFSNTIADDL---AGEATMASSEVGCLLPVY 413 Query: 447 ADNPLT------PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI 500 D G+ PT R + + D + N+N+N + SG GK+ +Q I Sbjct: 414 GDYLGNVNSDFPLTGMAYPTRRGTMHYFDPYVS---NSNFNGVMAAESGVGKSFSLQAKI 470 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE-----TLRFNPFANITDI--DQSAER 553 + L G V+FD G C +GG Y + PF+N+TD D+ E Sbjct: 471 TAELAEGDNIVLFDNGRSSLKFCALIGGEYNEFGGAKAWRPSLQPFSNLTDEEFDEQQET 530 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE-S 612 + +MA D L +AV+A+W + A + + L+ +S + Sbjct: 531 ITSLHMLMAYDEEKPDPGARIALSEAVKAAWGQRGKDAEVSTTIACLQAIVESAAENQIQ 590 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMF 672 + +I L + + T G YF L A+ V EL GL D L V+F Sbjct: 591 NQVHVAAANLIPRLKAFVDSPTRGPYFRGPST-LDPKAQFTVFELAGLGDDNHLKRVVLF 649 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 + + +R+ + +K +DE L + + E Y R++ + I Q Sbjct: 650 CCVNILLSRIKKF--KGRKRIYVDEAQDLFSIDS--AADAFEGLYLKGRKNGVSVWVIVQ 705 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ---LYPDQFLPLQRDMIGKFG 789 + + A S++K+I+ Q E + P + +I Sbjct: 706 S---LLKLASFKAGSVILRQSAWKMIMAQKKDEIDAVIDQKVMTAFADDPYFQKLIKSVE 762 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQL 849 + K+ W S L+ + RL+VD + ++SS+G + V Q +EG+ EAV ++ Sbjct: 763 SKKNFW-SEILIMSDKTYEVVRLYVDKFTATLFSSEGAARDDVLQMMEEGVGPLEAVRKV 821 Query: 850 AWKKSGPEMASLEAWLEEHEK 870 G + A W+ E Sbjct: 822 M----GDKKARRREWMSEFLD 838 >UniRef50_Q2NC54 Type IV secretion system protein B4, putative n=7 Tax=Alphaproteobacteria RepID=Q2NC54_ERYLH Length = 812 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 134/853 (15%), Positives = 256/853 (30%), Gaps = 105/853 (12%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESI------VEALDHMLRTKLPRGIP 95 LPY + L + D ++ ++ + E + +LR+ L Sbjct: 19 DRLPYARLVDANTLQLRDGSLMMAIQVPGLLFETEDSDALNAHAATREVVLRSTLDSRFV 78 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 L ++ R+ L E + + A + + + + L Sbjct: 79 LY-----HHVIRRRVAVELDA-----EFPDPLSRHIDARWKERLGSGSLFINDQFVTLVR 128 Query: 156 RHYR----------VFISYCSPSKKKSRADILEMENLVKIIRASLQGASIT-------TQ 198 R R + S + ++ ++ + ASLQ + Sbjct: 129 RPARGKAGLADRASRWFSRRKEELEADPRELRSLQAAATGLIASLQAYGASLLGEYQGPS 188 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN 258 ++++ + N + +D L Y+ D + Sbjct: 189 GGTNSEILELLSALYNGEMKPVRRPAEDVDIGQMLPYRRASFGLDAMEQR---------- 238 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 G L PE LL+ L + I+T T +++ Sbjct: 239 GAGDPDFSAILSLKDYPEATSP--------GLLDSLLRLPYEMIVTETYAPQERTTARER 290 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 +L L + + A E + R LG+G + L++ + Sbjct: 291 IDLSLRRLRSVDEEATA--------ERADMQNARDALGNGAVGFGDHHLSVLVR-ETTLP 341 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + + G ++ N F LP + + + + SF Sbjct: 342 RLDDASAACAAALADTGAVVVREDTNLEPAFWAQLPGNEAYIVRRAMISS---ANMASFG 398 Query: 439 VANLMPLV--ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 + L A N A L T F + + N +V G SG+GKT ++ Sbjct: 399 SLHGFALGQAAGNHWGDAVTLLETTSATPFFFNFHNGDL----GNFSVIGPSGSGKTVVM 454 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAER 553 L ++FD G + +GG Y GE FNP A + D + Sbjct: 455 NFLAAQAQKFAPRTILFDKDRGAELFVRGIGGRYDRIYAGEPTGFNPLA-LPDSAANRAF 513 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESP 613 +RD L V+ G + AV A++ + ++ + + L S Sbjct: 514 LRDWLGVLLKAEG---PEELQTIAHAVDAAYENDASLRQLRNFRELL-----------SG 559 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 + R ++ L + +G + F++ L D + + ++ L + P L M Sbjct: 560 SRRPEPGDLPDRLSAWIHSGEHAWLFDNQRDELDLDNRTLGFDMTALLENPKLRTPTMMY 619 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 L IE R+ + +IDEGW+ LD + I +T R+ TQ+ Sbjct: 620 LFHRIEERL----DGNPAMILIDEGWKALD--DEVFAARIRDWLKTLRKRNALVGFATQS 673 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 D S + A ++ + + S Y + + +I Sbjct: 674 AADALE---SRISTALVEQTATMVFMPNSRARAEDYCDGF--GLTSHELALIRSLP---- 724 Query: 794 QWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLA 850 FL++ + S RL + P + S + R+ G + + L Sbjct: 725 AHSRCFLVRQPDASVVVRLDLSNAPEVLTVLSGRESSVRRLDLLREAVGDNPADWFPALT 784 Query: 851 WKKSGPEMASLEA 863 + + Sbjct: 785 GHAWPGDPSEETE 797 >UniRef50_C0QUW6 Type-IV secretion system protein TraC n=1 Tax=Persephonella marina EX-H1 RepID=C0QUW6_PERMH Length = 926 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 167/837 (19%), Positives = 312/837 (37%), Gaps = 63/837 (7%) Query: 51 QESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRI 110 ++ +F+ GF + EA + L P G + SS + + Sbjct: 43 EKDNIFLTKEGFGFAFYLTLPAFLGQRQEEAFETFLNHDYPDGTVINFMAFSSSNIKPFL 102 Query: 111 EYGLREFSWSG------EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISY 164 +Y +E S + + Y + A F + V I + Sbjct: 103 DYWEQEHSAENVDIDNPGILKYIIKKRKEYLLNAVNNSFWEDVEAKPRIIYNIMSVHIPF 162 Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 S + R + L IR +++ +A + I E++N + Sbjct: 163 ESDNPDVVRIQFRRIRKLANRIREAIRAEGFGCDFANADMMLAIYKEILNPELQGAIKYQ 222 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 + LD N Q ++ + L++ L L F ++ P LW + Sbjct: 223 KGLD----FNRQVLDRNTTLRL-VGGLESDLEVANDEKKKYWRGFWFSQYPNEMTLWKFS 277 Query: 285 DNY--SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS-KTSYAKWFPSV 341 + + NP I F + + + VED K ++ K + ++ ++ K+ +A+W P + Sbjct: 278 NILFPYDDTNPSPIIPTDFFMCMQVKVEDIEKRQTKITAKAIQMQDQAEKSEFARWIPKI 337 Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP 401 ++ + +++ + G+ S + + DN E ++ + F F+L Sbjct: 338 KRRGEYAKYIKEVIEDGKVPY-SASMYLFI-SADNPEHLDDIASGAVQRFVSKKFKLARE 395 Query: 402 -RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT-PAGLLAP 459 + + CLP + ++ + N+A+LMP + + L Sbjct: 396 IDASLFNVLMECLPLN---QIKEREEFFINYSTLFDANIASLMPFQGTSLGSKRPITLYL 452 Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 + L D F TN+N+ SG GK+ L +G V D+G Y Sbjct: 453 DRKYSLWGFDPFHSD---TNFNIVKIAASGGGKSFSENDFHVLNLSAGRKIRVIDIGWSY 509 Query: 520 KSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMA-------------- 562 K LC +GG Y+ D FNPF +I D+ D+L+V+ Sbjct: 510 KPLCSLLGGEYIELDDERNPCFNPFTHI-IEDEKGNIHEDELAVLIPFVGLLAGLDLNPE 568 Query: 563 ---SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL 619 S NL + + +A+ ++ + N+ + +VV+ L+ D + L Sbjct: 569 ALISNEDNLMARYCSFIARAITNAYKSYGNKTGLKEVVEELQKLEDDTGDNIPQKLSQAL 628 Query: 620 DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIYI 678 E ++G Y +YFN E ++ VVLEL +E+ P L A+++SLI+ I Sbjct: 629 YEF--------SHGHYARYFNG-ENNIHYSKDYVVLELEQIENKDPRLKQAILYSLILRI 679 Query: 679 ENRMYR---TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 + +K V+DE W +L K G F+E R R++ + + ITQ I Sbjct: 680 FREFFLAHLRKDYSRKFLVVDEAWSILRES--KAGYFLETAARRFRKYGCSLVVITQKIE 737 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW 795 D AS A RA + NS++ +ILK S ++ ++++I ++ Sbjct: 738 DLL---ASPATRAIYANSAHLMILKPSEQDIEDAKSEKRLPVSDFEKELILSLTTVPGKF 794 Query: 796 FSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 + + RL VD S ++++ + + +E + + LA + Sbjct: 795 SELIIRNSVLGTVVGRLIVDRYSYWTFTTNDAERRVRTELLEELKNYELVLETLAKR 851 >UniRef50_C4Z002 Putative inner-membrane protein TraC n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z002_9RICK Length = 925 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 171/916 (18%), Positives = 337/916 (36%), Gaps = 96/916 (10%) Query: 26 AKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM-GFMLEAIPINGANESIVEALDH 84 N LG + L Y+ Y G+F ND + GF+ E G+NE + + L+ Sbjct: 32 HLENNFLGAVP---LKDFLHYKSYVAGIGIFFNDDGIAGFLTEISMRVGSNELLEKNLNL 88 Query: 85 MLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFP 144 ++P G+ + ++ S + D+ + + R +++ A Sbjct: 89 FFNNEIPEGVYMQFLVVGSNNIEDKFSLWKKGRIAHNDPMLDRITKYREAFLRERARDIG 148 Query: 145 LPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA 204 +G R ++ ++S + + + + + + + T++ D Sbjct: 149 NSDGR----IGRDWKTYVSCSMRGVDGNNSKLELLVKFKEKLLKKFISIKLNTRSCDVAD 204 Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFD----LKVRADYLTLGLRE--- 257 +V +++N L + R +D S N +++ + L +D + G+ E Sbjct: 205 LKYLVNDLVNMQLTPLSSQER-VDTNSSDNSSHTKNNANKHNLLDRLSDQILEGINEASI 263 Query: 258 -----NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + ++L + PE + +M L I++ ++ Sbjct: 264 TEEEIKHLKTDLVTRGYYLKKLPESFGINDMVSLLGPDLEG--GFPARLIISYSIANNIN 321 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 + + + S+ Y + S++ EAK W L R +G+ + F Sbjct: 322 KADEGKIISEGLRSIHASEKWYTRHDISLQNEAKWWKVLIDRNKNGEKFLTENFQIFITT 381 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 K+ E A E +L+ + F+L H+ L+ LP +K LK +V+ Sbjct: 382 TKNAVEIAEE---KLLSHYNSLDFQLARNDKLHLVGLLSILPMQQAA-FWKSLKFFQLVK 437 Query: 433 RAESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 + V +P+ + +G+L + ++ + F+R NYN+ V SG+G Sbjct: 438 NVPASEVVAKLPIHGEWKGINRSGVLLLGRKGEMFNWNPFYRVGGAGNYNVCVMAPSGSG 497 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGG----VYLDGETLRFNPFANI--- 544 K+ +Q L S++ V D+G Y+++ E + + L NPF I Sbjct: 498 KSFFLQELATSLVTQNVQVFVLDIGASYQNIAEGLNNSEFLRFNALNDLSLNPFHGIIGS 557 Query: 545 -----------------TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL---------- 577 I Q + L ++ S N + + Sbjct: 558 GAVYLEAQKLKREGKSKDAIMQRTGLTSEGLEILFSDNNKQEIAENETIEVLKIGEHFVT 617 Query: 578 -QAV------------------RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 AV + + + K I D L D Sbjct: 618 KDAVIYAKTTIATMCGVSGDNTKEAIIEKGLNEGIKQYGDCLN--LDKYARVLEEMENGM 675 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 E+ + L YT++G +G+YF + + + ++ + + E ++ L ++ +++ I Sbjct: 676 GRELAISLYPYTSSGVHGRYFRQGKNA-KFNSPLTIFEFEEIKGDEVFLSVILGIVLMQI 734 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 + R+ + + ++DE WR++D F+E RT R++ G+ IT Q DFD Sbjct: 735 TMQFLCGDRSKRFVLIVDEAWRIIDHSVG----FLEAFARTVRKYGGSLITCVQEFKDFD 790 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 + +A NSS+ +L+Q Q+ + +I + +S Sbjct: 791 N---GPKHQAILNNSSWTAVLRQEPAGIG---QMRHSEKFKNCTSLIETITKDPENKYSE 844 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 +L N RL VDP S +YS++ D+ F+ Q + GL A+ +L +K G ++ Sbjct: 845 IMLMGSNLRVIGRLVVDPYSECLYSTESEDYGFLHQCKNNGLDKDTAIRELIKRK-GKKL 903 Query: 859 ASLEAWLEEHEKYRSV 874 + E+ YRS Sbjct: 904 PEFKIEYEQVA-YRST 918 >UniRef50_Q9R2W4 Type IV secretion system protein virB4 n=30 Tax=root RepID=VIRB4_BARHE Length = 784 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 116/850 (13%), Positives = 256/850 (30%), Gaps = 97/850 (11%) Query: 35 MSFPQF-SRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLRTKLP 91 M +PY + + + +N + ++E + + A+ + +L + L T L Sbjct: 4 MKRESLPEDYIPYIRHINQHVIALNSRCLMTVMVVEGVNFDTADIDQLNSLHNQLNTLLK 63 Query: 92 RGIPLCIHLMSS-----QLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLP 146 + L S + + ++ + E+ ++ Y + P Sbjct: 64 NIADERVALYSHIIRRRETIYPESQFFSSFAATLDEKYKKKMVSQELYRNDLFVSLLWNP 123 Query: 147 EGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ--- 203 ++ + + I ++E L + + L+ +V A Sbjct: 124 ASDKTEQLASFFQRLAKAKKTQSEPDQEAIRKIEELSQDLIEGLESYGARLLSVYAHGGI 183 Query: 204 ---AFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGR 260 + + +++ + + + + + + + N R Sbjct: 184 LFSEQSEFLHQLVGGRRERIPLTFGTIASTIYSDRVI--------FGKETIEIRHESNER 235 Query: 261 NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEAN 320 F P + + L+ FILT + V + + Sbjct: 236 ----FAGMFGWKEYPSKTRP--------GMTDGLLTAPFEFILTQSFVFKSKAAASVIMG 283 Query: 321 LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 K + + + + E L S + + + L++ F ++ + Sbjct: 284 RKQNQMINAADR--------ASSQIEALDEALDDLESNRFVLGEHHLSLAVFA-NHPKAL 334 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 E G + + LP S N A Sbjct: 335 AEYLSKARAHLTNGGAVIAREDLGLEAAWWAQLPGNFSYRARSG--------AITSRNFA 386 Query: 441 NLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 L P + N A L T + + + + N VCG SG+GKT Sbjct: 387 ALSPFHSFPIGKLEGNVWGTAVALLKTQAGSPYYFNFHYGDL----GNTFVCGPSGSGKT 442 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQS 550 ++ L+ + V FD G + GG Y +G+ P + +++ Sbjct: 443 VIVNFLLAQLQKHNPTMVFFDKDQGAEIFVRAGGGKYKPLKNGQPTGIAPLKGMEYTEKN 502 Query: 551 AERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQY 609 +R+ + + + G + E + +A+ A + + + F N S Sbjct: 503 KVFLRNWVLKLVTAEGQTVTEEERQDIAKAIDALGNLPHAQRSLSALQLFFDNTSKEG-- 560 Query: 610 AESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 + + L ++ G F++D+ L D++ + ++ D + Sbjct: 561 ------------IAIRLQRWLKGNDLGWVFDNDQDDLNLDSQFIGYDMTDFLDNEEIRRP 608 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 +M L I + + + + VIDE W+ L ++ F + +T R+ G + Sbjct: 609 LMMYLFNRILDLI----DGRRIIIVIDEFWKAL--EDDSFKAFAQDRLKTIRKQNGMMLF 662 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQ+ D + S+ A +I + Y + + + ++I Sbjct: 663 ATQSPKDALN---STIAHTIIEQCPTQIFFPNQKANYKDYVEDFK--LTEREFELIQS-- 715 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKE-GLSIHEAV 846 + FL++ S L + + A+ S + E V Q E G + Sbjct: 716 -ELSRESRRFLIKQGQSSVVAELNLRGMNDEIAVLSGTTKNIELVNQIISEYGADPDIWL 774 Query: 847 WQLAWKKSGP 856 ++ Sbjct: 775 PIFHQRRENQ 784 >UniRef50_A8F0L1 VirB4 n=48 Tax=Rickettsiales RepID=A8F0L1_RICM5 Length = 814 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 119/856 (13%), Positives = 277/856 (32%), Gaps = 105/856 (12%) Query: 25 SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING--ANESIVEAL 82 + A E+ + P S +PY+ + + + D ++ +++ + A++ ++ Sbjct: 15 TRAAKELRSQQERPT-SHFIPYKCHWDSNTILTKDNSLLQVIKINGFSFETADDEDLDIK 73 Query: 83 DHMLRTKLPRGIPLCIHLMSSQ------LVGDRIEYGLREFSWS--------GEQAERFN 128 ++ L I + ++ D E+ G + + + Sbjct: 74 KNIRNALLKNMASGNIIMYFHTIRRRKAVIFDDTEFTYDPTVKVPNDFITYLGAEWRKKH 133 Query: 129 AITRAYYMKAAATQFPLPEGMN---LPLTLRHYRVFISYCSPSKKKSRADILEMENLVKI 185 A R+++ + + P+ + LR R S + + + ++ + Sbjct: 134 AGARSFFNELYVSILYKPDTGGIAIVEYFLRKLRQ-KSNKTAWENDMKEMKENLQEMSTR 192 Query: 186 IRASLQGASITTQTV------DAQAFIDIVGEMINHN--PDSLYPKRRQLDPYSDLNYQC 237 + + + V ++ + +IN P + R +D Y + Sbjct: 193 VVNTFRSYGARLLGVRQTQSGSYCEILEFLSSLINCGDSPGPIALPRGTIDEYLPTHRLF 252 Query: 238 VEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSI 297 + + + + + + L + Sbjct: 253 FDSRTIEARSP------------LGKKYAGMISILEY--------GPNTSAGIFDGFLQM 292 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 F++T + V ++ L+ + + + + E S Sbjct: 293 PFEFVMTQSFVFVNRTVAIGRMQLQQNRMIQSGDKAT--------SQIAEINTALDMATS 344 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 G + + L++ +N + ++ +G + + + N ++ LP Sbjct: 345 GDIAFGEHHLSLLC-SANNIKALEDILSMAAVELSNSGIQPVREKVNMEPSYWGQLPGNM 403 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVA--DNPLTPAGLLAPTYRNQLAFIDIFFRGM 475 + K SF + PL DN + T + + R + Sbjct: 404 DYIVRKSTINT---LNMASFASQHNYPLGKIRDNHWGEYVTVLDTTSGTPFYFNFHVRDV 460 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY--LD- 532 + + G +GAGKT L+ L FD G + + GVY +D Sbjct: 461 ----GHTLIIGPTGAGKTVLMNFLCAEAQKFKPRMFFFDKDRGAEIFIRALNGVYTVIDP 516 Query: 533 GETLRFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRA 591 G FNP + D ++ + + V+ + NG +L +L QAV ++ ++ Sbjct: 517 GLKCNFNPLQ-LEDTSENRTFILEWFRVLVTSNGESLTAQDNKILSQAVSGNFRLEKKDR 575 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DA 650 R+ +V+ FL + + + + G++ + F+++ + A Sbjct: 576 RLSNVIAFL--------------GIDTPNSLASRIAMWVGKGSHAKIFDNEIDDIDLQKA 621 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVG 710 ++ ++ L P L V+ + I + K + V+DE W L+D N Sbjct: 622 RVFGFDMTELLKDPVSLAPVLLYIFHRIN----ISLDGQKTMIVLDEAWALID--NPVFA 675 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN 770 I+ + R+ I TQ++ D S + ++ +I L K Sbjct: 676 PKIKDWLKVLRKLNTFVIFATQSVEDAAK---SRISDTLIQQTATQIFLPN-----LKAT 727 Query: 771 QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPD 828 +Y F+ QR+ I + FL++ + ++ +D + ++ S Sbjct: 728 DIYRSAFMLSQREYILIKTTDPTTRY--FLIKQGIDAVVAKVSLDGMDNIISVLSGRVET 785 Query: 829 FEFVQQKRKEGLSIHE 844 + Q R++ + + Sbjct: 786 VVLLDQIREKHGNDPD 801 >UniRef50_C9LWN3 Putative conjugal transfer protein TrbE part 2 n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWN3_9FIRM Length = 821 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 148/889 (16%), Positives = 287/889 (32%), Gaps = 145/889 (16%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRT--------K 89 P+ LLP+ ++++G+ ML G + LD M K Sbjct: 22 PRLQYLLPWAYVDEDTGIVHGKDH--SMLAVYEFRGPDMDSSTYLDLMQYNAAVNNVIKK 79 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY--MKAAATQFPLPE 147 LP G L I +E A++ +AYY K T++ Sbjct: 80 LPTGYVLYF------EAQRGISKEYQESRLDVPLAQKMEDERKAYYAGQKHFETRYYFIV 133 Query: 148 GMNLPLTLRH--YRVFISYCSPSKKKSRAD----ILEMENLVKIIRASLQGASITTQTVD 201 + P L+H +FIS K + + N V +I L ++ Sbjct: 134 YLEPPQLLKHKLTDLFISDKQKDGKTDMRLYVGIVEKFINNVNLIGDMLHSWFPDIHPLN 193 Query: 202 AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 A+ + + I+ + +DY+ GR Sbjct: 194 AEEALTYLHSTISTKKQVVKVNPLNY-------------------ISDYICDCGVLGGRE 234 Query: 262 ---STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 I + P ++ + ++ + + +V E Sbjct: 235 MMLGDRYIKMITILDFPPVSTPGA--------FDRLNNLDIEYRWVSRFICMSKVDAQKE 286 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEA-------------KEWGELRQRLGSGQSSVVSY 365 ++ K+ + + ++ KE + Q LG +S Y Sbjct: 287 LKDYRQRWNQQIKSFWTQVREAILKEKMEDERDETAMYNKDDASAALQELGQDYTSYGYY 346 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + + +D + LE IL S G+ N M ++ +P + + + Sbjct: 347 TMTVMVSDEDQGK-CLEKANRILESINSLGYTAYIETDNSMESWWGSIPGCYRANIRRPI 405 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLT-------PAGLLAPTYRN-QLAFIDIFFRGMNN 477 S N +L P+ A LL + + + Sbjct: 406 --------VSSLNFCHLAPVTATWSGDKRNECLKGPVLLYTDTTGYTPFRLSLHVGDV-- 455 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD---- 532 + +CG +G+GK+ L+ L L +FD ++L +GG + + Sbjct: 456 --GHTLICGRTGSGKSVLLNTLEVHFLKYPNSNVFIFDKAASSRALTLAVGGNFYNIASE 513 Query: 533 -GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRA 591 L F P A++ D ++ L + N + + + +A+ + + + Sbjct: 514 GSGELSFQPLAHVEDEKETKWAKEWILGYLNLKNITITPAKDNFVWKALLSLREFPKEQR 573 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 I + +++ E+ L T G YG+ F++++ + + Sbjct: 574 TISTFCEMVQD-----------------QEIRQALAALTVKGAYGKLFDNNKD-ISGIGR 615 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 V E+ L P+++ + + L IE ++ + + L ++DE W F N E Sbjct: 616 WQVFEMETLMATPAIVPSTLEYLFHRIETKLQKA--SGPSLIIMDEAWLF--FDNPMFKE 671 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 I++ ++ R+ + I TQN+ D A N KI L + K + Sbjct: 672 KIKEYFKDMRKKNTSIILATQNLTDL--SAKPELLSAVLNNCPNKIYLSDKEAKTEKSQE 729 Query: 772 LYP-DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFE 830 +Y Q D+I +D ++S E + RL + P+ + Sbjct: 730 IYRMFGCNEKQMDIIANMEPKRDYYYS-----SEKGNRIFRLALQPI----------ELP 774 Query: 831 FVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWL------EEHEKYRS 873 FV K+ +++ Q A ++ + +E WL +E E YR Sbjct: 775 FVTATAKKDQQAMDSILQSAGRE-----SFIEEWLKYKDCQDEWEDYRE 818 >UniRef50_Q07GT1 VirB4 protein, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q07GT1_ROSDO Length = 786 Score = 365 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 116/825 (14%), Positives = 262/825 (31%), Gaps = 86/825 (10%) Query: 25 SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEAL 82 + K E + R LPY + + + D + F++E I + A+E+ V+ L Sbjct: 9 ARKDLEASEDQGEHLLVRHLPYVGAVTDDVMMLRDGDLIASFIVEGIAADTASEADVDDL 68 Query: 83 DHMLRTKLP---RGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAA 139 + + + +H SS +V ++ + + F A + Sbjct: 69 SLAFSRTVTQAQSDVGIYVHRFSS-VVSPKL-------TGVAPEVSTFAAAVDQRWQSHI 120 Query: 140 ATQFPLPEGMNLPLTLRHYRV------FISYCSPSKKKS-RADILEMENLVKIIRASLQG 192 T + +TLR +V F+S +++ + D+ + +V +++ Sbjct: 121 ETSGLRSRQAMITVTLRPSKVKSLWAKFVSGGVAAQRGTREKDVSRLNEIVDHFMEAVRV 180 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 AS T ++ + +I ++ + + P + L D + +++ Sbjct: 181 ASPTRLSISSGEWIGLLRAINTGQFFTSPPGAGFM----PLADMIAVGRLDFR-NDTFVS 235 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 G T F + P + + +++ + + Sbjct: 236 FGSDSKD---TRYGAVFSIKSYPSNSAPGIFNRF---------DLPFDMVISQSYTPVNP 283 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 V++ + ++ + + + + + SG+ + + IT F Sbjct: 284 VESEERISRTARQMQAADD--------AAQTLKDQLVDALDDVASGRIGMGMHHATITVF 335 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 E I + ++ G ++ F P + + Sbjct: 336 AG-TVAELDEAAASIRGAGQRAGATVVREDVGARAAFFAQHPGNYAYRARAAMISSTNFA 394 Query: 433 RAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGM--NNTNYNMAVCGTSGA 490 + + A P + + P R + + G T + V G +GA Sbjct: 395 DFTALHATPAGHSRAQTPWGESVTILPDIRGEPYRFNFHLAGELQERTVGHTLVIGMTGA 454 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDI 547 GKT L+ + FD G + +G Y GE FNPFA D Sbjct: 455 GKTLGACFLLAQAARLNPRIIAFDKDQGMEMPLRALGADYAKVRMGEPTGFNPFAAEAD- 513 Query: 548 DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 ++ + L + G L L A R++ + + L++ D Sbjct: 514 ERGTAWLTSWLEATLAAQGTLSATQREALSNATRSNMETDPSLRTMRQFRSQLRSVDDG- 572 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD--EPSLRDDAKMVVLELGGLEDRPS 665 ++ L + +G YG F+ + + +L + + +L + + Sbjct: 573 ------------GDLHTRLGLW-DDGQYGWLFSGEGQDETLSFNNDVTAFDLTEIFETQE 619 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 + A + + IE ++ + +IDE W++LD + ++ T R+ Sbjct: 620 VRTAWLAYVFRRIERQI---EDERPTIILIDEAWKVLD--DPFFEAMLKDWALTLRKKNV 674 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMI 785 + +TQ + + S+A + + ++ S + P F + + Sbjct: 675 VLMLMTQRVDHLVN---SAAGGSILESCVTTLVYPNSRYTLDEVA---PLNFTDAEAAFV 728 Query: 786 GKFGAAKDQWFSSFLLQVENHSSWHRLF---VDPLSRAMYSSDGP 827 + L++ + S+ + + PL + + G Sbjct: 729 TSSAGGQRL----ALIRNGDVSTVVNMDLGALGPLLKVLGGGKGE 769 >UniRef50_Q9PHJ8 Conjugal transfer protein n=6 Tax=Proteobacteria RepID=Q9PHJ8_XYLFA Length = 815 Score = 364 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 123/868 (14%), Positives = 253/868 (29%), Gaps = 128/868 (14%) Query: 43 LLPYRDYNQESGL-FMNDTTMGFM-LEAIPINGANESIVEALDHMLRTKLPRGIPLCIHL 100 +PY + ++ + +N + + ++ A+ + + L + Sbjct: 20 FIPYSSHVTKNVVKLVNGDYIATIRMQGAAHESADVQDINSWHDQLNGF--------MRN 71 Query: 101 MSSQLVGDRIEYGLREFSW--SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR-- 156 ++S RE+ GE F Y K A++ L + L + R Sbjct: 72 IASPNTAVWSHVVRREYGEFPGGEYQPGFCHDFNEKYRKHMASEKMLVNELYLTVVYRPQ 131 Query: 157 -----HYRVFISYCSPSKKKSR--ADILEMENLVKIIRASLQGASITTQTVDAQ------ 203 + S +P + + R ++ +E+L+ + ASL Sbjct: 132 PVKAVKFLDIFSSKAPKELQQRQTEELEVVEDLISVALASLDRYEPELIGCYEHKGKMFS 191 Query: 204 AFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST 263 ++ + +++ R ++ + + ++ G ST Sbjct: 192 EVLEFLAFLVDGEWRRFPLPRTEIREVLATSRPFFGKGGLMSLK-----------GPTST 240 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 + P I +LN L + F+LT + + + Sbjct: 241 QFCAAVTIQEYPSITCP--------GILNELLGMPFEFVLTQSFSFISKPVAVGRMKRQQ 292 Query: 324 MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEV 383 + + E + L S + + + ++ D + E Sbjct: 293 ARMVNSGD--------VAGSQIDEIDDALDDLTSNRFVMGVHHFSMMIRAHD-QKALNEH 343 Query: 384 EQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLM 443 D +G + F + LP + V S N A Sbjct: 344 ISDTGAVMSDSGMKWAREDAGIAGAFWSQLPGNFEYRVR--------VGDITSRNFAGFS 395 Query: 444 PLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN-------------YNMA 483 +N A + T + + N Sbjct: 396 SFHNFPIGRIRNNQWGDAVTMFKTTSGAPFYFNFHKGEEGADAKKSAKLDPNHKDLANTV 455 Query: 484 VCGTSGAGKTGLIQPLIRSVLDSGGF-------AVVFDMGDGYKSLCENMGGVYL---DG 533 V G SG GKT L L+ V+FD G MGG Y +G Sbjct: 456 VIGKSGMGKTVLEMMLLAQTQKFEQPQFGKKLSCVLFDKDLGAAIGVRAMGGRYYPLKNG 515 Query: 534 ETLRFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRAR 592 FNPF + + + + L E + +A+ A + + R Sbjct: 516 VPSGFNPFQMEPTT-SNLTFLETLIKQLVKHESLPLTPRQEREISEAIAGVMGAAKQKRR 574 Query: 593 IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-K 651 I +++FL + ++ + L+++ GT F++ +L D Sbjct: 575 IGALLEFLDSTDENG--------------LHPRLERWCRGGTLAWLFDNPVDTLSLDNCT 620 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 +V ++ D + + L IE+ + + +DE W+LL+ + + Sbjct: 621 IVGFDVTEFLDNDATRTPTIMYLFHRIESLI----DGRRIPIFLDEFWKLLN--DPAFED 674 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 + T R+ G + TQ+ S A A G ++ KI L ++ Y Sbjct: 675 LAQNKLVTIRKQDGFLVMFTQSPKQVLK---SPIAYAIIGQTATKIFLPNPEADYDDYVN 731 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDF 829 + + +++ + FL++ +S L + A+ S + Sbjct: 732 GFK--LTEREFEIVKSL----GEKSRQFLIKQGQNSVVAELNLRGFDDELAVLSGNTATS 785 Query: 830 EFVQQKRKE-GLSIHEAVWQLAWKKSGP 856 ++ E G + + + G Sbjct: 786 LLAEKLVAELGDDPAVWLPEFHRIRKGA 813 >UniRef50_C7I4D6 CagE TrbE VirB component of type IV transporter system n=1 Tax=Thiomonas intermedia K12 RepID=C7I4D6_THIIN Length = 816 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 125/862 (14%), Positives = 255/862 (29%), Gaps = 96/862 (11%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDTTMGFMLE--AIPINGANESIVEALDHMLRTKLPRG 93 S LLP+ + + ++ + + + A+ + L G Sbjct: 10 SAYGLPDLLPWAALVDNGIVLTKSGGLMAAWAYHGPDLDSSTQEELGAMAARVNAALKLG 69 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE--GMNL 151 +H + + + + + + ++F L Sbjct: 70 DGWVLHCDAVRAPAPGYAPPGAFPDRTTRLIDDARRNSHEHSFVGYRSRFILTVTWFPMP 129 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + +F K + ++ + ++ + + L + + G Sbjct: 130 DAASKTADLF--VEGRVKATASRNLERFKEQIRELESRLSTL-LDIHRLK-DQIDPRTGA 185 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + + L L D + G R I L Sbjct: 186 IDSPMLAHLEQCVSLLPDRRPFRMAQAPMYLDAVLGQHDFATGFIP--RIGRRSISCIAL 243 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 P +++ +L+ + + + + D + N +K K Sbjct: 244 TGLP--------PESFPGILDMLSRLPVSYRWSSRFIYLDPGQAEKTLNKYRSKWAQKRK 295 Query: 332 TSY-----------AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 + ++ A + + SG + Y+ ++ ++ E Sbjct: 296 SMMNMLRENAGGQATHINADADRMANDAVQALAEASSG-MVLFGYYTSVLLLSHEDPEIL 354 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 E ++++ GF N +L LP + + + + N+A Sbjct: 355 DESTREMVKLTLNRGFGARVEDVNAAEAYLGTLPGNTAANVRRPI--------LHTLNLA 406 Query: 441 NLMPLVADNPL------------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 +L+PL A +P L A T + + + + A+ G + Sbjct: 407 HLLPLTAVWAGPERNPCPFYPPNSPPLLQAKTDGGTPFTLSLHAGDL----GHAAILGPT 462 Query: 489 GAGKTGLIQPLIR-SVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG----ETLRFNPFAN 543 GAGK+ L+ + G FD G LC GG + D L F P Sbjct: 463 GAGKSTLLALVAAQQFRYPGAQVFAFDKGYSMLPLCWAAGGEHYDIAGEQGDLAFCPLGR 522 Query: 544 ITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN--RARIDDVVDFLK 601 + + ++ + + H L +A+ + EN + + + + L+ Sbjct: 523 VDEPNERVWAAEWLEQLCELQGVRMLPHHRQELFRAITQLGASTENMAQRTLTNFLVLLQ 582 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 + + L YT G G +++ SL D V E+ L Sbjct: 583 D-----------------QSLREALQAYTLRGMAGHLLDAETDSLGQDV-FQVFEMEHLM 624 Query: 662 DR-PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 ++ L++ V+ L IE R + L ++DE W +L I + + Sbjct: 625 NKGDKLVLPVLTYLFHRIEQRF----KGQPTLLILDEAWIMLSH--PAFKAKIREWLKVL 678 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 R+ A + TQ++ D S A + + KI L E LY L Sbjct: 679 RKANVAVVFATQSLTDLT---RSGIADVIFESCPTKIFLPNPEAETENIRPLYEAVGLNA 735 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV-DPLSRAMYSSDGPDFEFVQQKRKEG 839 ++ I F K Q++ + + L + P + +S D +++ R Sbjct: 736 RQIKILAFATPKRQYY----VMHPDGRRLFDLGLTGPELAFVGASGKTDIARIRELRDTL 791 Query: 840 LSIHEAVWQLAWKKSGPEMASL 861 H Q ++ E A L Sbjct: 792 G--HAWPAQWLRERGQFEAAQL 811 >UniRef50_Q1M9N8 Putative crown gall-like type IV secretion system protein n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9N8_RHIL3 Length = 793 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 128/826 (15%), Positives = 251/826 (30%), Gaps = 93/826 (11%) Query: 13 NSLVTALKLPDE-SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPI 71 S T L+ P +A++ + LPY + L + D + Sbjct: 3 KSWCTVLERPATRAARSLAIKRSEKGEMLVSGLPYLSAVDDVTLMLRDGDLMGSFVV--- 59 Query: 72 NGANESIVEALDHM-LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI 130 G N V++ + L R I ++ RI R FN Sbjct: 60 EGINAETVDSFHTVELCNAFSRFIAQQRSDVA--YYVHRISVETRPTMPPVGGHP-FNEE 116 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRV---FISYCSPSKKKSRADIL----EMENLV 183 + T + L +R R F+S SR ++ ++ ++ Sbjct: 117 IDRRWQGYLQTVGLRDRVTVVTLVIRPPRKTTKFLSLFGGRDVHSRHEVEARALRLDQMI 176 Query: 184 KIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDL-NYQCVEDSF 242 + A + TV ++ ++ +I+ + SL P + L L + Q Sbjct: 177 NTCMVGVGEAGPSRLTVSDGRWLGLLRTLIDGSGGSLIPGTKFLPVADLLASSQITFQGP 236 Query: 243 DLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFI 302 + P + + L++ + Sbjct: 237 ---------VFECEGTDPARRRFGTIVSVKDYPAETYPGILDR---------LNLPYNTV 278 Query: 303 LTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 +T + D + + + + + + E + SG+ Sbjct: 279 VTQSFTPIDPISAQGKIARVRKQMRAAEDAAISL--------MAQLEEAEDDVASGRVIF 330 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + ++ FC D+ + + + + G ++ F+ + P Sbjct: 331 GDHHCSVAVFC-DSLKELDGAMAYVTRAMQDAGAAIVRENFSSRVVYFAQHPGNFAYRTR 389 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPA--------GLLAPTYRNQLAFIDIFF-- 472 S N A L + + +P + PT R + + Sbjct: 390 --------PAMISSQNFAQLCAMHGQSKGSPPDKCPWGDAVTIFPTARGETFRFNFHLPG 441 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 + T + V G +G+GKT LI G ++FD +G++ MGG Y Sbjct: 442 KPGQRTVGHTLVLGQTGSGKTLGTAFLISQAQRLGARTILFDKDNGFEMAVRAMGGCYSA 501 Query: 533 ---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN 589 G+ FNP D +A + ++ + G L+ V L AV+A+ A Sbjct: 502 VRMGDETGFNPMRAEADSRGAAWLMDWLAALAENDGGKLNPVQIQALSDAVQANTTADPR 561 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD-EPSLRD 648 ++ L+ D ++ L ++ G +G F L Sbjct: 562 LQNLEQFRSQLRATDDD-------------GDLYNRLGRWDETGQFGWLFGGKGLDPLAF 608 Query: 649 DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 D ++ +L + D + A + + +E + L V+DE W+LLD N Sbjct: 609 DNRLTAFDLTEIFDNDVVRTAWLSYVFRRVERLV---EDEHPTLLVLDEAWKLLD--NPY 663 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 ++ T R+ A + +TQ + K S+A A ++ +++ F Sbjct: 664 FEARLKDWMLTMRKKNVAVVLLTQRVSHI---KNSAAGDAILESAVTRLVY---TSSFNT 717 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV 814 +L P P + + LL+ + S + Sbjct: 718 AAELAPLHLTPTESAFLQMSNVDNHL----VLLKSGSDSVVLDFDL 759 >UniRef50_D0L172 CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L172_HALNC Length = 819 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 116/862 (13%), Positives = 252/862 (29%), Gaps = 138/862 (16%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLRTKL---PRGI 94 LL Y E + D ++ + I + + L L L G Sbjct: 14 LPDLLNYALMPDEGIVQGKDGSLMASWYFRGEDIGSSTAQELAQLSARLNHALVQLGSGW 73 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAER----FNAITRAYYMKAAATQFPLPEGMN 150 + + D I R + +R +A R Y + AA + Sbjct: 74 MIHV---------DAIRQYARSYPPLCPFPDRTTLVIDAERRVQYEQEAAHLESVYAMTL 124 Query: 151 LPLTLRHYRVFISYCSPSKKKSRAD----------ILEMENLVKIIRASLQGASITTQT- 199 L + I+ S KK+ + + + I L+G + T Sbjct: 125 THLPPKAAETKIAGWIYSGKKNDTEGMAGRILNNYKNALLDFESAISGVLKGRRMRTTEH 184 Query: 200 -------------VDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKV 246 + I + + + + Q + + +V Sbjct: 185 TDGLIGHHAWGAAYTLDEQLRFFNYCITGEDRPVRLPSVPMYLDALIGNQPLLTGVEPQV 244 Query: 247 RADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT 306 ++ L P+ ++ +L ++S + Sbjct: 245 GDKHI---------------AVIALDGYPQESWP--------GMLGALDTLSITYRWNTR 281 Query: 307 LVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE--------KEAKEWGELRQRLGSG 358 + D + + N ++K + + F + ++ + + SG Sbjct: 282 FIFLDGHEAKAIMNKHRKKWQQKQRGLKDQIFKTSSGAVDLDALQQTNDVESAMSEVESG 341 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + NI D+ E Q + + + GF N + +L LP + Sbjct: 342 VLKFGYHTANIIVMH-DDPVVLKEQAQKVRKAILELGFGARIETINAVEAWLGSLPGHSQ 400 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPL------------TPAGLLAPTYRNQLA 466 + + L + N+++++P+ + +P T + Sbjct: 401 YNVRRPL--------LHTLNLSDMLPITSVWAGNEFNPCPFYPEQSPPLTYTATTGHTPF 452 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCEN 525 + + + + + G +G GK+ + L FD G LC Sbjct: 453 RLSLHVGDV----GHTLMLGKTGGGKSTALAFLAAQHFRYPDAQVFSFDKGYSCFVLCNA 508 Query: 526 MGGVYLD----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR 581 GG Y D L F P A I ++ + V +++ + + L+ A + Sbjct: 509 AGGEYYDIAGEDSELAFCPLAQIDTKEEQSWAVEWVETLLVLQGVTITPNNRSLIYDAAQ 568 Query: 582 ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 + + + + V +++ M L+ YT G G ++ Sbjct: 569 RL--SHSSVRTLTEFVSQIQDVG-----------------MRSALNYYTVAGPLGHLLDA 609 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRL 701 ++ L+ + + V E+ L + + +++Y+ ++ R L IDE W Sbjct: 610 EKDGLK-NNRYQVFEMEHLMNMGEK---AVIPVLLYLFRQVERRLDGRPTLVFIDEAWLA 665 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 L E + + +T R+ A + TQ + D + S A + KI+L Sbjct: 666 LSH--PMFREKVREWLKTWRKKNAAAVLATQELADVMN---SPIRDAILASCPTKILLPN 720 Query: 762 SAKEFAKYNQ-LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA 820 + Y + +++ + ++ + N L + +S A Sbjct: 721 PEAQEPAQRDWYYEIGLNDREIEILATATPKRHYYY-----KSPNGRRVFDLGLGAVSLA 775 Query: 821 MYS-SDGPDFEFVQQKRKEGLS 841 + S + + + Sbjct: 776 FVAKSSPEHIKQARAMIAQYGD 797 >UniRef50_B9JPS0 Type IV secretion protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS0_AGRRK Length = 814 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 140/842 (16%), Positives = 262/842 (31%), Gaps = 109/842 (12%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGAN--------------ESI 78 S +PY + E L D + GF + + +S Sbjct: 21 ISAHVPYLRHVDEETLRTKDGMLLTIIKVGGFCHQTADQQIIDVEATARNTLVRALADSR 80 Query: 79 VEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKA 138 H++R ++P I + + + +R L + T Y+ Sbjct: 81 FAVYSHIVRRRIPPDIGGAFDIPFCKNLDERYMASLADSRM----------YTNELYLTI 130 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 F G+ L + H+R + + D ++ L + + ++G Sbjct: 131 IRRGFQGRVGLADAL-MSHFR-----KAAGMSEQALDREALQELRQHVANIVKGMEHYGV 184 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR-- 256 + ++ E + + L L+ +N D + +T G R Sbjct: 185 RI----LKAVLRE-YSVASEPLEFLAMLLNGGQQVNMALPRMPLDQYLPTRRITFGRRMF 239 Query: 257 --ENGRNSTARI-LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 G + R + P + +++ L F+++ + ++D+ Sbjct: 240 EMRGGSDDDTRFGAMLSIREYP--------PYTAAGMIDGLLKAPGEFVVSQSFALQDRA 291 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 SE + + + + S+E + L +G+S + + L + A Sbjct: 292 PILSEMDRIERQI-----SVSDERGTSLESA---ISIAKDELVNGRSVMGYHHLTVMAL- 342 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 + + Q I + G ++ N F LP + L + Sbjct: 343 GNTIKETESSAQAITKELQNAGMVVVREDLNAEPAFYAQLPGNFAYIARRALISSRNFCG 402 Query: 434 AESF-NVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 S+ N A P A N PA L T F + + N V G +G+GK Sbjct: 403 LASYHNFALGKP--AGNHWGPAVSLLQTTSMTPYFFNFHKGEV----GNFIVTGPTGSGK 456 Query: 493 TGLIQPLIRSVLDSG--GFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDI 547 T + L+ + + FD G + GG Y G FNP + D Sbjct: 457 TVALLFLLSQAMRARPQPRCAFFDKDRGGEIFIRACGGQYEVLQPGMASGFNPLQ-LEDS 515 Query: 548 DQSAERVRDQLSVMASPN---GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNAS 604 + V D LS + P L E +L +AV + DV+ L+ Sbjct: 516 PDNRAFVHDLLSYLVRPKNEAEKLSAEQEKILARAVDHIFNVPIRERLFSDVIHLLRGGE 575 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRP 664 + + D++ + + T G FN+ D + +L + D P Sbjct: 576 AAGR-----------DDLASRFEAWCD--TRGWLFNNPVDLWNSDRGVFGFDLTAVLDDP 622 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 + A + + I + + +DEGW+LL + K G FI +T R+ Sbjct: 623 EIRTAALGYIFFRIGQML---DGERPMMLFVDEGWKLLG--DDKAGAFINDQLKTIRKKN 677 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 G TQ+ D + S A S I + Y + ++ + Sbjct: 678 GIVGIGTQSARDITT---SRIAHTLLEQSPTNIFFPNPKADRESY--VTGFGLSEVEFEW 732 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKRKEGLSI 842 + + FL++ ++ S RL + P + S ++ R Sbjct: 733 VKSTSST----SRQFLVKHDHDSVIARLDLSGLPDFIKVLSGRAETVAECERLRHRHGDA 788 Query: 843 HE 844 E Sbjct: 789 PE 790 >UniRef50_B4S9L3 CagE TrbE VirB component of type IV transporter system n=2 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9L3_PROA2 Length = 820 Score = 357 bits (917), Expect = 8e-97, Method: Composition-based stats. Identities = 117/874 (13%), Positives = 252/874 (28%), Gaps = 113/874 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLRTKL---PRG 93 + LP+ + D + + ++++ + A L L G Sbjct: 13 RLPDHLPWAALVAPGVILQKDALLQKTVSFRGPDLASSSDAELAAAVGRLNNALRRLGSG 72 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 + + + V + +W ++ R + + ++ + Sbjct: 73 WSIFVEAQRQECVSYDPADWIHPAAWLVDKERREQFMQDGAHYESRYYLTFVQALQPGER 132 Query: 154 TLRHYRVFI--SYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + + R+F + + + ++ V+ I +QG + + +D + + Sbjct: 133 SGKARRLFYDDPVTRSAAENNERELEAFVKTVQEITDIMQGVFVDVRELDDDETLTYLHS 192 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 I+ + + + L + + + +++ + Sbjct: 193 TISSRKHPVKAPDTPMYLDALLPDEAFTNGDIPMLGDNFI---------------PTVTI 237 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 + P ++ +L+ + + + D+ + E K K Sbjct: 238 SGFPS--------ESLPGMLDDLNHLEIDYRWVCRYICLDKDEARREIEKYRRQWWSKRK 289 Query: 332 ------------TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 S A +A + Q LG S +T D + Sbjct: 290 NLFTLLKEEATKESSALLDSDASNKAADADVALQELGEDLVSYGYITCTVTVTHPD-LDE 348 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 A + + + GF + N + LP + + + + N+ Sbjct: 349 ARRRMRRVRQVIQSRGFVVRDETLNSKEAWFGSLPGHVYANVRRPMVN--------TLNL 400 Query: 440 ANLMPLVADNPLTPAGLLAPTYRN-------------QLAFIDIFFRGMNNTNYNMAVCG 486 A++MPL A A +++ + + V G Sbjct: 401 AHMMPLSAIWAGEQANTHLGALTGCSLPHMMCSTTGSTPFRLNLNVGDV----GHTLVVG 456 Query: 487 TSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGE----TLRFNPF 541 +GAGK+ L+ L L V+FD ++ +GG Y + F P Sbjct: 457 PTGAGKSTLLCMLELQWLKYPDSQVVIFDKDRSARAATMAVGGHYYEPGNEHAPFAFQPL 516 Query: 542 ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 A+I D + L ++ + + A+ + + D ++ Sbjct: 517 AHIDDQAERVWAAGFVLLLLREQGVKETPALKKEIDSALANLASQTADHRTMTVFTDLVQ 576 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 + E+ L YT G YGQ F++D ++E+ L Sbjct: 577 S-----------------REVRDALRPYTIQGNYGQLFDADHEE-SLKGSWQMIEMNSLM 618 Query: 662 D-RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 L+ ++ L IE R L V+DE W L ++ +T Sbjct: 619 GMHSEALIPALYYLFHRIEQRF----DGRPTLLVLDEAWLFLKHD--VFMSQMQNWLKTL 672 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP-DQFLP 779 R+ + TQ + D S KI L + Y Sbjct: 673 RKKNVYVVFATQEVADAAE---SPIMATILSACHTKIYLPDEEALTPGMARAYHTFGLSE 729 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDGPDFEFVQQKRKE 838 + ++ + +D ++ + +L + ++ + S D +F+ + +E Sbjct: 730 TEIRLLSQAQKKRDYYY-----RSPKGRRMFQLEMGDIALSFAGMSSPDDHQFMDRLERE 784 Query: 839 GLSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYR 872 A+ + A A L E EK R Sbjct: 785 N-----AIGEYASGLLRHRGLDWAAELLEREKAR 813 >UniRef50_C5TJS3 VirB4 protein n=2 Tax=Proteobacteria RepID=C5TJS3_NEIFL Length = 838 Score = 357 bits (917), Expect = 9e-97, Method: Composition-based stats. Identities = 130/886 (14%), Positives = 262/886 (29%), Gaps = 123/886 (13%) Query: 21 LPDESAKANEVL-GEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAI--PINGANES 77 + K N++ + S QF L + + + P G E Sbjct: 13 RTIPTQKTNKMFTPDASISQFVSL---STHVSPTIVKTTGGDYLTTWHLSGLPFVGREEW 69 Query: 78 IVEALDHMLRTKLPRG---IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAY 134 +E + L + + + R E E FN Sbjct: 70 ELEHKHNTFNRLLQSLRAPDYVNVAFWVHDIRRH------RSIDLRPEFQESFNQSLSNR 123 Query: 135 YMKAAATQFPLPEGMNLPLTLR---HYRVFISYCS---PSKKKSRADILEMENLVKIIRA 188 Y + + + + L + R + F+ K + I + L + A Sbjct: 124 YFSRLSQEKLMNNELYLTMIYRPVVDGKKFVDKSGNIDRLKAEQEQAIGTLNELATNLEA 183 Query: 189 SLQGASITTQTVDA-------QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDS 241 L+ + +++ G ++N + + + Y L+ Sbjct: 184 VLKDYHPYRLGMYEGKNGTVFSETLELFGYILNRINEPVPVLPAPVYNYLPLSRHLFSAK 243 Query: 242 FDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPF 301 DY+ G+N I +L P+ + +LN + + Sbjct: 244 T-----GDYIV--RTPEGKNHYGAI--LNLKEYPDGTYP--------GILNGLKYLDVEY 286 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 ++T + + + S+ + E +L SG Sbjct: 287 VITHSFSPMSRYDAMKTLERTRGMMISSGDKSF--------TQIAELDHAMDQLASGNFV 338 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + Y ++ + D+ E + GF + LP Sbjct: 339 LGGYHFSLAIYA-DSQEQLSQNIASARAELSNAGFVTTKEDLAVCAAYYAQLPGNWNYRT 397 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRG 474 + S N L PL NP + T Q + + Sbjct: 398 R--------IANLSSLNFLGLCPLHNFAVGKREGNPWGQCVTVLQTTNGQPYYFNFHATL 449 Query: 475 MNNTN------YNMAVCGTSGAGKTGLIQPLIRSVLDSGGF--AVVFDMGDGYKSLCENM 526 + N V G SG GKT LI L+ V FD G + Sbjct: 450 EGEDSEGEKAIANTMVIGKSGTGKTALINFLLSQVQKYDPKPTIFFFDKDRGAEIFVRAC 509 Query: 527 GGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRAS 583 GG Y+ G+ FNPF + + + + + + + + + +L+AVRA Sbjct: 510 GGAYMALESGQPTGFNPFQ-CENTEANVQFLCGLMKQL-GGKAHYSAAEDDDILRAVRAM 567 Query: 584 WLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE 643 I + L N D D + + ++T + G F++ + Sbjct: 568 LDTPPALRSISNFQKSLPNTGD--------------DSLYANIRKWTRGNSLGWVFDNPQ 613 Query: 644 PSLRDD-AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + A ++ + + + P + V+ LI +E + + + ++DE W++L Sbjct: 614 DKIDFSGANIIGFDYTDVIENPQVRDPVIGYLIHRMEELI----DGRRFIYIMDEFWKIL 669 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 D + + EF + +T R+ G I TQ+ D S + A ++ I+L Sbjct: 670 DGE-GGLKEFAKNKQKTIRKQNGMGIFATQSPEDALK---SDISAALIEQTATMILLPNP 725 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRA 820 + Y + ++ D+ FL++ + S+ +L + A Sbjct: 726 NADKKDYIDGLK--LTDSEFQVVKSL----DERSRCFLVKQGHASAVCQLNLRGFDDELA 779 Query: 821 MYSSDGPDFEFVQQKRKEGLS----------IHEAVWQLAWKKSGP 856 + S+ + + + K+ + + ++ G Sbjct: 780 VISASTDNIDIMDGIIKQTAERLGVEIDAVRPQDWLQTFYEERKGS 825 >UniRef50_D0ZHN0 Type IV secretory pathway component n=1 Tax=Edwardsiella tarda EIB202 RepID=D0ZHN0_EDWTE Length = 852 Score = 356 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 135/899 (15%), Positives = 262/899 (29%), Gaps = 140/899 (15%) Query: 20 KLPDESAKANEVLGEMSFP---QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING--- 73 K + + E+ + + +PY+ E+ + L+ I ++G Sbjct: 29 KEDAQVKAEKRKVQEVPWHRENSVAEFIPYQAQVNENTVKTQGGDY---LQVIKLDGVAH 85 Query: 74 --ANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAIT 131 A+ VE + L + L ++ I GE A F+ Sbjct: 86 ESADPEDVEIWKEQINILLRNISSPQVALWTN------IVRRENTIFPGGEFAGDFDKGL 139 Query: 132 RAYYMKAAATQFPLPEGMNLPLTLRHYRV----FISYCSPSKKKSRAD----ILEMENLV 183 Y + + L + R F S +K+ I +++ +V Sbjct: 140 NDKYSAYVTKNKMMVNELYLTIVYRPTATKALGFFSKMEKNKEVLNQQQFEAIEKLDEIV 199 Query: 184 KIIRASLQGASITTQTVDA------QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQC 237 I +SL + ++ + ++N + R+ L Sbjct: 200 SIATSSLNRYGPRVLSTYMRNDIIHSEVLEFLDFLVNGDWMPRALPRKVLSE-------- 251 Query: 238 VEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSI 297 ++R + G + ++ PE + LLN LS Sbjct: 252 ----CMARMRPFFGADAFELRGVVDSRMGAVLGISEYPE--------GTEAGLLNALLSA 299 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGS 357 P +LT + + + LE + + + + L S Sbjct: 300 PFPLVLTQSFNFLSKAIAIELLGRQKNRLETTGDLAV--------SQVEAIDDGLDDLAS 351 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 G+ + L++T F +D + + + + LP A Sbjct: 352 GRIVYGEHHLSLTVFGED-ARDLRGNLSAARSELADCSMVVAREDWALAAAYWAQLPGNA 410 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLV-------ADNPLTPAGLLAPTYRNQLAFIDI 470 S N A N PA + T + + Sbjct: 411 KY--------RPRPAPISSRNFAGFSSFHNYPTGERTGNQWGPAVTMFKTTSGAPYYFNF 462 Query: 471 FFRGMNNTNY---------------------------NMAVCGTSGAGKTGLIQPLIRSV 503 ++ N + G SG+GKT + L+ Sbjct: 463 HEALDSSKARKKAELEREKGAAALKELEAKEEQKALGNTLIIGPSGSGKTVVQGFLMSQS 522 Query: 504 LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSV 560 V+FD G + GGVYL +G FNPF + + + D + Sbjct: 523 KKFNPTQVIFDKDRGLEIYVRASGGVYLPLQNGVPTGFNPFQLAP-TEDNLLFLTDLVKK 581 Query: 561 MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 + G+ + E + +AVR + + RI +DFL S + +A Sbjct: 582 IC--GGSFNNQEEKEIDKAVRGVMGLSKEKRRIGRCLDFLDPVSQNGPHA---------- 629 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAK-MVVLELGGLEDRPSLLVAVMFSLIIYIE 679 L ++ G+ G ++ E +L D M ++ D + V+ L IE Sbjct: 630 ----RLAKWCEGGSLGWVLDNPEDALDFDNNTMFGFDVTEFLDNAEVRTPVVMYLFHRIE 685 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 + + +DE W+LL + + + + R+ G + TQ+ D Sbjct: 686 QLI----DGRRFQMFMDEFWKLL--LDEYFEDLAQNKQKVIRKQNGIMVYGTQSPKDVL- 738 Query: 740 DKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSF 799 S A + + + + + A Y + + +I + F Sbjct: 739 --RSPIAHSLIEQCATYVFMPNPKADRADYVDGF--HLTEREFQLIKE---DMAPGSRRF 791 Query: 800 LLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGP 856 L++ +S L + A+ S + + Q ++ AVW + + Sbjct: 792 LVKQGQNSVVAELNLKGFDDELAVISGTTDNVNLMTQIIEQHGDDP-AVWLPIFHEQRR 849 >UniRef50_B0T9U2 CagE TrbE VirB component of type IV transporter system n=20 Tax=Proteobacteria RepID=B0T9U2_CAUSK Length = 824 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 115/853 (13%), Positives = 249/853 (29%), Gaps = 119/853 (13%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANES----IVEALDHMLRTK 89 + LP+ + D + + + ++ L++ LR Sbjct: 10 KADRLFDHLPWVALIGPGLILNKDGSFQKTLAFRGPDLASSTDAGLVATRAQLNNALRRL 69 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGM 149 G C+H+ + + S E + + F + Sbjct: 70 ---GSRWCLHIEALRAASQDYPASQFPDLVSDLVDEERREAFEGHERHFESRYFLTFTYL 126 Query: 150 NLPLTLRHYRVFISYCSPSKKK----SRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 + + +PS + RA + + + V+ I L + Sbjct: 127 PPEEAVSTAESLLLENAPSGRGAAGMYRAALSDFLSTVRQIADILTAVMPEVHELSDDET 186 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + + I+ + + L + ++ + Sbjct: 187 LTYLHGCISTKRHYVKAPETPAYLDAFLTDDDFQGGLLPRL---------------GASF 231 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 + + P + LL+ + + + D+ Sbjct: 232 VRTISVRAYPATSSP--------GLLDRLNELGISYRWVCRFLPLDKEDARKAVTTVRKR 283 Query: 326 LEKKSKTSYAKW------------FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 K K A P ++ + LG +S+ + +T Sbjct: 284 WFAKRKGVMALLKEAITREPSVLEDPDAAAKSMDADAALAILGGDYASIGYFTPTVTLMD 343 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 D + + +++ ++ + GF N + ++ LP A L + L Sbjct: 344 TD-PDRLADRVREVESAINRVGFVCKVEDVNAVEAWIGSLPGQAYADLRRPL-------- 394 Query: 434 AESFNVANLMPLVADNPL-------------------TPAGLLAPTYRNQLAFIDIFFRG 474 S N+ ++MP+ A P P + T D+ Sbjct: 395 VSSLNLCDMMPMSAIWPGPTRNEHLGSECAKRGHPGAQPPLMFTRTAGTTPFRFDLHQGD 454 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYL-- 531 + + + G +GAGK+ L+ + L FD G ++ GG + Sbjct: 455 V----GHTMIVGPTGAGKSVLLNAIAVQWLRYPEAQVFFFDKGASSRAATLLTGGQFYAL 510 Query: 532 --DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN 589 + L F P A+I D + ++A+ + + + +R + Sbjct: 511 GSEESELAFQPLADIDTADDRSWTQEWVQDLVAAEGVEITPQVKEEIWSGLRNLAAGPRD 570 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD 649 + + + +++ + L +T +G +G ++ + +L+ Sbjct: 571 QRTLTLLAATIQDH-----------------SVKAALKPFTLSGPHGHLLDASQNTLKAG 613 Query: 650 AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKV 709 E+ L S L V+ + +E R L ++DE W LD Sbjct: 614 T-WQTFEMAELMGNKSALAPVLTYIFRTLEKRF----DGRPTLLILDEAWLFLDQ--GSF 666 Query: 710 GEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKY 769 I + +T R+ A + TQ++ D SS A A + ++ L + + Sbjct: 667 AAKIREWLKTLRKFNVAVVFATQSLADI---ARSSIAPALIESCPTRVFLPNPDAQTPQI 723 Query: 770 NQLY-PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDGP 827 +LY P Q +I ++ ++ S + + L + P S A+ SS Sbjct: 724 AELYQGFGLNPQQIRIIANATPKREYYYQSM-----SGNRLFELGLGPFSLAVVGSSSPG 778 Query: 828 DFEFVQQKRKEGL 840 D + + + E Sbjct: 779 DQQLMTRLLAEHG 791 >UniRef50_B0T8Q5 Putative conjugal transfer protein TrbE n=2 Tax=Alphaproteobacteria RepID=B0T8Q5_CAUSK Length = 812 Score = 354 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 129/853 (15%), Positives = 257/853 (30%), Gaps = 104/853 (12%) Query: 30 EVLGEMSFP-QFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHML 86 ++ P Q S LP+ + D ++ ++ V A+ L Sbjct: 3 DLREYARRPKQLSDYLPWAALVAPGVVLNKDGAFQRTAGFRGPDLDSVGDAEVAAVAARL 62 Query: 87 RTKLPR-GIPLCIHLMSSQLVG-DRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFP 144 L R G I + + + + + + ER A + Sbjct: 63 NNALRRLGSGWAIFIEARRDPAMAYPDGVFPDPVSALVDIERRQAFLEEGAHFESRYFLT 122 Query: 145 LPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA 204 L T R +F+ + ++ RA + + + A +QG + + A Sbjct: 123 LVYLPPAERTGRLENLFVEGRAQAEIDWRAQLTGFVDRSDRLLALIQGLAREAAWLSDAA 182 Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 + + + + + + + Q +E + ++ +L Sbjct: 183 TLSFLHGAVTTARQDVRVPETPMHLDALVATQALEGGLEPRLGGAHL------------- 229 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 + P LL+ ++ + + + D+ + Sbjct: 230 --RILTIVGFPS--------QTLPGLLDELNRLAFAYRWSTRALCLDKADANRLIGKIRR 279 Query: 325 DLEKKSKT------------SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 K K+ A +A E Q LG + ++ + Sbjct: 280 QWFAKRKSIGVLLQEALTQQPSALVDSDAANKAGEADLALQDLGGDAVAYAYVTASLVVW 339 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 +D + A F +I R N + +L LP + + Sbjct: 340 DED-ADLADAKLALAEKVIAGRDFSIIKERINAVEAWLGTLPGQTYANVRQP-------- 390 Query: 433 RAESFNVANLMPLVADN--------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 + N+A++ PL A P L+A T + + + + + V Sbjct: 391 PLSTLNLAHIAPLSAVWAGPSSNPHLGGPPLLMAKTEGSTPFRLSLHAGDV----GHTLV 446 Query: 485 CGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG---------E 534 G +GAGK+ L+ L G V FD G ++ MGGV+ D Sbjct: 447 VGPTGAGKSVLLALLALQFRRYAGARIVAFDFGGSIRAAALGMGGVFHDLGGVLLDAERS 506 Query: 535 TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID 594 + P + + D + +++ + + A+ + A + Sbjct: 507 PVALQPLSRVDDPAERVWASDWIAVLLSGQGVVVTPAVRDHIWSALASLASAPIEERTLT 566 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 +V L ++ L YT G +G+ ++D +L A + Sbjct: 567 GLVALLPTL-----------------DLKSALTPYTLAGPWGRLLDADFEALAAGA-VHA 608 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 E GL P +++ Y+ +R+ R L +IDEGW L + G + Sbjct: 609 FETEGLLGTP-----AAPAVLAYLFHRIERDLDGRPTLILIDEGWLAL--ADPAFGAQLR 661 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 + +T R+ + + TQ++ D D AS A + +I L + +Y Sbjct: 662 EWLKTLRKKNASVVFATQSLTDID---ASPIAPVIVESCPTRIFLPNPRALEPQSAAIYA 718 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQ 833 L ++ I A K ++ +Q L + P++ A +S D + Sbjct: 719 RFGLGARQVEILSRSAPKRDYY----VQSRAGERLFDLGLGPVALAFCAASSKTDQADIA 774 Query: 834 QKRKEGLSIHEAV 846 A Sbjct: 775 AVLAAHGPEDFAA 787 >UniRef50_A4X0Q7 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4X0Q7_RHOS5 Length = 785 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 113/841 (13%), Positives = 247/841 (29%), Gaps = 100/841 (11%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPINGAN---------ESIVEALDHMLRTKLPR 92 R LP+ ++ E + + G + + ++G + + L+H +R Sbjct: 15 RYLPFIRHSDEHTIITR--SRGA-FQMLKLDGVSFRTADTSAVNTFHNGLNHAIRNIAAD 71 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFS-WSGEQAERFNAITRAYYMKAAATQFPLPEGMNL 151 + + +H++ + + W E R + T + P Sbjct: 72 NLMVYVHVIHTPDAEYPAGSFQSATAGWIDESYRGRLETRRLFRNDLYLTIYMQPRVAPG 131 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFID---- 207 R R + + ++ + N ++ A ++ + I Sbjct: 132 MSLARGVRRARTSEVEVDRDLLTELDDKANQLQRTLARFNPRKLSIIRNERGLLISEPAS 191 Query: 208 IVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARIL 267 ++ ++I + + + + +D ++ Sbjct: 192 VLRQIITGRHEPVPVVHGTIGSAIHTDRVIFGREALEIRHSD------------ASTYGA 239 Query: 268 NFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLE 327 F + A N+ + L+ F+LT + + + LK + Sbjct: 240 IFAVKEY--------HALTRPNMFDDLLTAPFSFVLTQSFRCVAKNMALRQMALKEGRMR 291 Query: 328 KKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDI 387 + +A + R L SG+ + + L + C + D Sbjct: 292 NAGDPAL--------SQADQLIAARDELMSGKFVMGEHNLTLLVLC-ETPAELKNRVADA 342 Query: 388 LNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 N +G + F + LP V S N + PL Sbjct: 343 RNLLADSGAVVAREDMGLESQFWSQLPGNHAFRAR--------VALMTSRNFTAMAPLHN 394 Query: 448 DNPLTPAGLL-------APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLI 500 G T + + + + + G SG+GKT L L+ Sbjct: 395 YPTGHRHGNEWGDAICKLQTSAGSPFYFNFHVGDL----GHTFIAGPSGSGKTVLQTFLL 450 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFANITDIDQSAERVRDQ 557 + G ++FD G + GG YLD PF + + + + Sbjct: 451 SQLEKFGAKRILFDKDRGAEIFVRASGGSYLDFRNGVATGCAPFMALDMTPDTQAFMVEL 510 Query: 558 LSVMASPN-GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIR 616 + M + + + AV+ + + + D L Sbjct: 511 VKSMLGGDRAGFSADDQHRIEAAVQHLGALPVEQRTVRALCDLLGFGGG----------- 559 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 +++ LD++T +G G F++ + +A +V ++ D + +M L+ Sbjct: 560 --AEDIGSRLDRWTKSGRLGWVFDNAADEIDFNADLVGFDITEFLDDAEIRNPIMMYLMR 617 Query: 677 YIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 IE + + IDE W+ L + +FI+ + R+ G + TQ+ D Sbjct: 618 RIEQLI----DGRRIAIFIDEFWKAL--TDPYFSDFIKNKLKVIRKQNGIIVAGTQSASD 671 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWF 796 AS AR + +I + + + + + + Sbjct: 672 VI---ASPIARTIIEQCASQIWFGSDRASASDLVEHFGLSHREYEI-VREELPRGH---- 723 Query: 797 SSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 FL++ +S L + L + S + + R+ + + +L ++ Sbjct: 724 --FLVKQGGNSIVCDLDLTGLEDVLTVLSGRTSTNAILTELRQIHPDPVDWLPRLFQRRK 781 Query: 855 G 855 Sbjct: 782 E 782 >UniRef50_Q5DY65 VirB4 ATPase n=1 Tax=Vibrio fischeri ES114 RepID=Q5DY65_VIBF1 Length = 817 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 118/853 (13%), Positives = 266/853 (31%), Gaps = 94/853 (11%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGA--NESIVEALDHMLRTKLPRGIPL 96 + +PY + +S L D + M + + + L L T Sbjct: 15 SLAHYIPYSSHLTDSILITTDGDLLQMFRLSGVAFETKDNEELSLLHQRLNTLYKGLSES 74 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 + L + ++ ++++ + A + + +F + L+ Sbjct: 75 DVSLWTH-VIRRKVKHTINGEFNQHFAAHFDAVYNAQFGEEIMTNEFYVTVIQRSTDRLK 133 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVD----AQAFIDIVGEM 212 I + E+ +L+K S S+T +T + ++ + Sbjct: 134 KLNRNIDAIKARLVERIDAFTEVTDLIKNNLESYHPTSLTCKTNQQGTVLSEPLTVLNYL 193 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 + H +++ ++ + +K+ +D + L N +ST + Sbjct: 194 LTHEWVNVHKPTGEIKHAI--------GNAWIKIGSDTIEL----NSVSSTHYAQGIDIK 241 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 ++ + LLN L F+LT + + + + + Sbjct: 242 EYASRSY--------NGLLNGLLYSEFEFVLTQSFSLYPRKIAAKFIKTQKRRGKSSGDG 293 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 + + ++ + L G ++ Y ++ F D+ + + + S Sbjct: 294 AI--------TQIQDLDQASNDLLDGHFAMGEYHFSLLVF-GDSIDNVRQYRSEAQKSLS 344 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA----- 447 + + + F LP G V S N A+ P Sbjct: 345 HSELLCVPIKIATDAAFFAQLPANWGY--------RPRVVGLTSRNFASFSPFHNFLIGK 396 Query: 448 --DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPL 499 NP A T + + + + N N + G +G GKT + L Sbjct: 397 KEGNPWGDAVTRLKTLSGHPFYFNFHYTLTGDDNFNEKVAGNTRMIGMTGTGKTVALGLL 456 Query: 500 IRSVLDSGGF----AVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAE 552 V FD G + + +GG YL +G+ FNP Q+ Sbjct: 457 YCQAQKYAQHSPFSTVFFDKDRGAEVMIRALGGNYLRVQNGKQTGFNPLQMNPTP-QNIS 515 Query: 553 RVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE 611 ++ + + S L + E + QAV ++ R+ + + + E+ Sbjct: 516 FLKRWVRQLVESKQHPLTTLDERSISQAVDTVMRMEKPLRRLTLINQNIAVGTSKEERE- 574 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM-VVLELGGLEDRPSLLVAV 670 + + LD++ G + F++D L ++ + ++ D + + Sbjct: 575 --------NSIKARLDKWCQGGEFAWVFDNDVDLLDFNSATNIGIDGTEFLDNHDIRTPI 626 Query: 671 MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 L+ ++ + + V+DE W+ ++ + +F+ T R+ G + Sbjct: 627 CLYLLHRMDEVI----DGRRFFYVMDEAWKWVN--DDAFSDFVGNKQLTIRKQNGFGVFA 680 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 TQ S A + S +I L + +Y + + ++ +F Sbjct: 681 TQLPSSLL---GSPQGAALIESCSTEIYLPNPKAKHDEY--VTDLGLSEKEFSILKEF-- 733 Query: 791 AKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPDFEFVQQKRKE-GLSIHEAVW 847 + L++ N S+ L + +S + S+ + + KE G + + + Sbjct: 734 --GEKSRLCLIKQGNQSAICSLTMPGMSNELTLLSASSDELPLFDESIKEVGENPIDWIP 791 Query: 848 QLAWKKSGPEMAS 860 K + Sbjct: 792 IFLQKVREEKERK 804 >UniRef50_C6XES2 CagE TrbE VirB component of type IV transporter system n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XES2_METSD Length = 824 Score = 351 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 113/854 (13%), Positives = 276/854 (32%), Gaps = 93/854 (10%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPR- 92 S LL Y + + + GF+ + + A+ L + L Sbjct: 9 KAEGLSDLLRYAASVDDGVVMGKGGELIGGFLYLGSDTESSTAMELNAIAIRLNSVLGSF 68 Query: 93 --GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMK---AAATQFPL-P 146 G + ++ ++ +G + ++ + + R +Y + + L Sbjct: 69 GNGWMVHCDVVRTEAIG-----YPGKGAFPDPVSYAIDQERRHHYKSVDGHFQSAYALVF 123 Query: 147 EGMNLPLTLRHYRVFISYCS------PSKKKSRADILEMENLVKIIRASLQGASITTQTV 200 + L R ++ + K + I + + + + ++L + + Sbjct: 124 TYLAPSLLESKGREWLFETTGEEKSTNGKTLAAKTIAKFQAAMADVESALSSVFLGVTRL 183 Query: 201 DAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGR 260 +I+H + ++ + R + S L+Y S +++ + + + + Sbjct: 184 KCIE-----HRVISHGIEDVWVEDRLM---SYLHYAVTGISQKIRLPSIPMYIDTIIGSQ 235 Query: 261 NSTARILNFHLARNPEIAFLWNMA-DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 + I+ ++ ++ + ++Y +L+ + + + + D + Sbjct: 236 DFVGGIIPKIGKKHIQVVNIEGFPAESYPGMLDHLNRLPITYRFSTRFIFLDPEEAKGIL 295 Query: 320 NLKYMDLEKKS--------KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 N +K+ T + K+ G+ ++ ++ Sbjct: 296 NKLRKKWRQKATPLSDQIFNTKTGAVDLDAIQMEKDAESAMSEAGALTVRFG-HYTSVVV 354 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL---KEA 428 +++ E ++ S R GF N + + LP + K + Sbjct: 355 LMEESLEKLKATTTTVVKSIRDMGFSARVEDINAIEAYFGSLPGEGVANVRKPILHSLNL 414 Query: 429 GVVQRAESFNVA---NLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVC 485 + SF N P ++ T L + + + + + Sbjct: 415 SHLLPTTSFWAGPERNPCPFYGND--TAPLLYGRGAGATPFRLTLHVGDV----GHTLIL 468 Query: 486 GTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYL----DGETLRFNP 540 G +G+GK+ L+ ++ FD G MGG++ D +L F P Sbjct: 469 GPTGSGKSTLLNLIVAQQRRYNRAKIFAFDKGMSAYIPTMAMGGMHYEVGGDNSSLAFCP 528 Query: 541 FANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENRARIDDVVDF 599 A++ + A + + ++ S NG + H ++ AV + A + + Sbjct: 529 LAHVDQAHERAWA-EEWIEILLSLNGIVVGPRHRSIIHDAVMSLGNADPDLRTLTHFQAQ 587 Query: 600 LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 L++ +E+ L Y +G+ ++++ +L + V E+ Sbjct: 588 LQD-----------------EELRDALSPYVGSGSAAHLLDAEKDTLDLGN-LQVFEMEH 629 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 L + + +++Y+ +++ L V+DE W +L E I + + Sbjct: 630 LMNMGEKN---LIPVLMYLFHKIEGQLDGSPTLIVLDEAWLMLSH--PLFMEKIREWLKV 684 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP-DQFL 778 R+ A + TQ+I D + S+ A + + KI+L + Y Sbjct: 685 LRKANAAVVFATQSIEDIVN---SAIAPVVFQSCPTKILLPNPEARNEISAKAYKQIGLN 741 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS-SDGPDFEFVQQKRK 837 Q ++I +D ++ L + P++ A S D + ++ + Sbjct: 742 ERQLELITMGTPKRDYYY-----LSSVGRRLFSLELGPVALAFVGKSGKEDIKLARELVE 796 Query: 838 EGLSI---HEAVWQ 848 E + + Sbjct: 797 THGEYKWVPEWIRR 810 >UniRef50_A0AXD0 Type IV secretion/conjugal transfer ATPase, VirB4 family n=13 Tax=root RepID=A0AXD0_BURCH Length = 826 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 115/843 (13%), Positives = 245/843 (29%), Gaps = 107/843 (12%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEAL--DHMLRTKLPRGIPLC 97 + +P+ + + + + + + I + L + Sbjct: 17 LADFIPFSSHVTDRVIRTREGDYIQIWKIPGIAFETADPADILARHVTFNQLVRNLPGGH 76 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNA-ITRAYYMKAAATQFPLPEGMNLPLTLR 156 + L + +L + E ++ + ++ T + P R Sbjct: 77 VALWTHRLRRRTADRF--ETTYLNRFCQDLAERYYASFAGYTMMTNELYVSAVYRPHRTR 134 Query: 157 HYRVFISYCS----PSKKKSRADILEMENLVKIIRASLQ-----GASITTQTVDAQAFI- 206 R+F ++ + + + ++ I L+ + + + Sbjct: 135 LGRLFSRAARRTVDDIQRDQQDALRALADIAAQIETGLKPWSPCALGVYERRDPLTKRLC 194 Query: 207 ------DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGR 260 +++G ++N +++ ++ + L + L + Sbjct: 195 RYSAALEMLGYLVNGTWEAVPVGYGRI--------CDTLPTSRLFFHREKLEIRTP---- 242 Query: 261 NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEAN 320 T L PE +LN L +I T + V D+ Sbjct: 243 TRTRYAALLDLKDYPEQTEP--------GMLNGLLYGDFEYIETQSFTVLDRPSAKEALE 294 Query: 321 LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 + L + + + + L +G + Y + D + Sbjct: 295 RQRNQLIAGDDVAV--------SQIEAMDQAANDLVNGDFVLGEYHYTLAVL-GDTLDEV 345 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 + GF+ + P + + S N Sbjct: 346 VRHVAQARTKLADAGFQSALIDLVADAAWFAQCPGNWRYRPRE--------AKLTSRNFC 397 Query: 441 NLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGT 487 + L NP A + T Q +++ + N + G Sbjct: 398 AMASLHNFATGKREGNPWGEAITIVKTPSGQPLYLNFHATPEKVDSNDEKALANTQIIGR 457 Query: 488 SGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANI 544 +GAGKT L L+ + G V+FD G + MGG Y GE NPF Sbjct: 458 AGAGKTVLELFLLAMAMKYGVMGVLFDKDRGAEIGIRAMGGQYTVFHRGEPTGMNPFQLE 517 Query: 545 TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNAS 604 D + +R + + L E + +A+R + R+ V L N Sbjct: 518 ADEATHSFWMR-LVCKLVDNGVPLSAKDELDISRAIREVARMDRSLRRLSMVRQLLPNVG 576 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDR 663 D + + L ++ A G G ++ + DA ++ + L D Sbjct: 577 D--------------NSLHARLAKWCAGGRLGWVLDNPVDRIDLDAHRLFGFDDTELLDD 622 Query: 664 PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRH 723 P + + L+ E + + + V+ E W+ L + EF +T R+ Sbjct: 623 PEVCAPLTMVLLHLTERLI----DGRRFIYVMTEFWKRLR--DPVFSEFANDKQKTIRKQ 676 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 G I TQ+ D S S +RA ++ L + + Y + + + Sbjct: 677 NGLGIFDTQSPADVLS---SPISRALVEQTATFFFLPNPSADHDDYVHGFK--LTEAEFN 731 Query: 784 MIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKEGLS 841 ++ + + FL++ + S+ RL + + + S + + R + Sbjct: 732 IVRRM----GEHSRLFLVKQGHRSAIGRLDLSGMGDVLDVLSGTSDNVALLNTIRAKVGD 787 Query: 842 IHE 844 + Sbjct: 788 DPD 790 >UniRef50_B6A599 Type IV secretion/conjugal transfer ATPase, VirB4 family n=2 Tax=Rhizobium leguminosarum RepID=B6A599_RHILW Length = 839 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 127/867 (14%), Positives = 255/867 (29%), Gaps = 132/867 (15%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALDHMLRTKLP 91 S +P+ + + + + + GF E A+ + L + Sbjct: 23 SISTHVPFYVPIENGIIRLKNDCLVSTIKLTGFSFET-----ADIETINMLQRQRNSAFR 77 Query: 92 RGIPL-CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMN 150 + L + I + SG ++ F Y + Sbjct: 78 AISSIGNFALYT-----HVIRRKVAPSLPSG-FSDPFMRRLDDVYQSGISKNEMFVNDTY 131 Query: 151 LPLTLRHYRVFISYCSP---------SKKKSRADILEMENLVKIIRASLQGASI----TT 197 + L +R S S +++ RA ++ + + SL Sbjct: 132 VSLVVRPLFRQGSALSRIMGVGGNVVRREQFRAMRDKLVEATRALEKSLAVYGPKVLRDI 191 Query: 198 QTVDAQ---------------------------AFIDIVGEMINHNPDSLYPKRRQLDPY 230 Q V+A+ + ++N Sbjct: 192 QRVEAELGNGRKIYRDISEDMVVEEGMRKIWFSEQCEFFYTLLNGGRVRPIR-----LSN 246 Query: 231 SDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNL 290 ++ + R +L +++ R L P + + + Sbjct: 247 IPIDQMLPARRTSIGNRVIHLQGDTQDDDR----YAAMVSLKEYP--------PETGAGM 294 Query: 291 LNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGE 350 L+ L + +LT ++ D + S + K + Sbjct: 295 LDYVLKLPFEIVLTQSMSFIDDMAARSRIERLDRQMSKADEGG--------SSVQANLDI 346 Query: 351 LRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFL 410 R L + + + + L + K + + I N G + N + Sbjct: 347 ARDELARKRVAFMEHHLTVMPVAKSTAQ-LDDAVALIGNELGALGASYVREDLNAEPAYW 405 Query: 411 TCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV--ADNPLTPAGLLAPTYRNQLAFI 468 LP + L SF+ P N PA + T F Sbjct: 406 AQLPGNQAYIARRALISTLNCAGLSSFHA---YPYGKPDGNHWGPAITIFETTSGTPFFF 462 Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD--SGGFAVVFDMGDGYKSLCENM 526 + + + V G +G+GKT ++ LI +VFD G + Sbjct: 463 NFHQGDV----GHTTVFGPTGSGKTVIMAFLILQAYRVSPRLKTIVFDKDRGLDIMVRAA 518 Query: 527 GGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASP---NGNLDEVHEGLLLQAV 580 GG Y+ GE +NP + D +++ + LS M P NL E ++ A+ Sbjct: 519 GGTYMALEPGEPSGWNPL-LLDDTEENRVFLYGLLSFMLKPSKEGENLTPQEEAIIRNAI 577 Query: 581 RASWLAKEN-RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 ++ K+ R+ + L + +E +I LD++ +G Y F Sbjct: 578 KSVLKTKDRSYRRLSSLRALLAGSERTEG------------SLIARLDKWVGHGPYAWLF 625 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 ++ + +L M+ ++ + D P++ A + + ++ +N++DE W Sbjct: 626 DNADDNLDISRPMIGFDMTSILDDPTVRTAALLYMFHRLDAI---YDGKAPIINLMDEAW 682 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 +LLD + + ++ ++T R+ G I TQ+ D SS +R +S I Sbjct: 683 KLLD--DDEFKRTMKDYFKTIRKRNGLVIFGTQSADDVVQ---SSVSRTIIEQTSTNIFF 737 Query: 760 KQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PL 817 + Y + + D L++ S R+ + P Sbjct: 738 ANPKADENSYMEHFGLSRAEFDW------VRNGDPSSRFMLIKQAKSSVIARVDMSHMPE 791 Query: 818 SRAMYSSDGPDFEFVQQKRKEGLSIHE 844 + S V+ E + Sbjct: 792 FIKVLSGREETVREVELLLDEYGDDPK 818 >UniRef50_A3EW09 Probable conjugal transfer protein (TrbE) n=4 Tax=Leptospirillum RepID=A3EW09_9BACT Length = 812 Score = 346 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 126/840 (15%), Positives = 244/840 (29%), Gaps = 105/840 (12%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLR---TKL 90 S P LL + L D ++ F + ++ + A + +KL Sbjct: 12 SRPGLESLLNWESLVAPGVLRNKDGSLLSAFEFSGPDLESSSSEELAATSARINAAFSKL 71 Query: 91 PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMN 150 G + I L+ + E + + +ER A + + Sbjct: 72 GSGWMIHIDLLRLPSLDYLPEGNFPDSATRAIDSERRLQFEHADAHWLSRRVLAVTWSPP 131 Query: 151 LPLTLRHYRVFISYCSPSKKKS--RADILEMENLVKIIRASLQGASITTQTVDAQAFIDI 208 + +F+ P ++ R + ++ V L G +T + + + + Sbjct: 132 GETASKFGELFLKESGPRGPRTHFRQTLARFQSDVGRFSDLLSG-GMTLKPLGDEDLLTH 190 Query: 209 VGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILN 268 + + + R D + L + D K+ Sbjct: 191 LHTCLTGKTHPVRVPRIPTDLDALLATGDLTGGLDPKI---------------GRLWFRV 235 Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 ++ PE +F L+ + ++ + D E + Sbjct: 236 VTISGFPESSFP--------GFLDALAQVPFAIRYSIRFIPLDPPTAERELARHRRRWLQ 287 Query: 329 ---------KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 + + S ++ + + G I F +N Sbjct: 288 LRMGLLGMMTGRDQASGAQTSASEKGLDVEMAQAENADGSVRFGYAAFKILIFD-ENPSV 346 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 E + + GF I N + ++ LP A + K L S NV Sbjct: 347 LAERVRMVEKIVNNLGFGTIHEEMNCLSAWIESLPGHAYPNIRKPL--------MHSLNV 398 Query: 440 ANLMPLVADN------------PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 ++LMP+ +PA LA + F +I + + + G Sbjct: 399 SDLMPVTTVWSGRSVNPCPFYPQGSPALFLASSSGTTPFFGNIHVGDL----GHTLILGP 454 Query: 488 SGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD----GETLRFNPFA 542 G GK+ L+ L FD G LC GG + + L F P A Sbjct: 455 PGMGKSVLMAFLAAQFFRYPRAQVFAFDKGSSSYVLCTASGGQFYEIAGPDSALSFCPLA 514 Query: 543 NITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN 602 + D + S++ L + + A++ +R + V+ +++ Sbjct: 515 GVDDPAERTWAQGWIESMLVLSGLTLTPAIKQEVKNALKTHADTPPDRRSLGVFVERIQH 574 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG-GLE 661 ++ L YT +G+ G+ ++D SLR + V E+ Sbjct: 575 L-----------------DVREALRYYTKSGSMGELLDADTDSLR-TSHFSVFEMEYAFG 616 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 + L+ ++ L IE R+ L ++DE W L E I + + R Sbjct: 617 LPHAALLPLLLYLFHRIEQRL----DGRPTLLLLDEVWLFLSH--PVFQEKIREWLKVLR 670 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF-AKYNQLYPDQFLPL 780 + A I TQ D + S + KI L + Sbjct: 671 KKNAAVIFATQQPFDVVN---SPIRDVILESCPTKIYLANPEAVAGPSHAAYATMGLSER 727 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS-SDGPDFEFVQQKRKEG 839 ++IG + + + L + ++ A SD + ++ K G Sbjct: 728 SIEIIGSLVPKRHYY-----VTSSEGKRVIDLGLGKVALAFTGVSDQEELGVARRILKSG 782 >UniRef50_C5D061 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Variovorax paradoxus S110 RepID=C5D061_VARPS Length = 835 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 131/860 (15%), Positives = 252/860 (29%), Gaps = 113/860 (13%) Query: 41 SRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCI 98 + ++P + E L A++ + + L L + Sbjct: 18 ATMIPLSAHVDEHVALTRAGDYVQTLRLAGTSFESADDEDINSWHERLNVLLRNIASPNL 77 Query: 99 HLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 L + + + Y +G F Y + A + + + L + R Sbjct: 78 ALWTHVIRRREMAY------PAGRTTPGFADEIEQRYRRKMAGERLMVNELYLSVVFRPQ 131 Query: 159 RVFIS------YCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 I + + +RA++ + + +R L A + D +A I Sbjct: 132 PTRIGNAALRLFKRADPEGARAELRDALDACSKLRQELLAA---LERYDPEAL-GIYRLQ 187 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVED---SFDLKVRADYLTLGLRENGRNSTARILNF 269 N S + L + + + L + E + RI F Sbjct: 188 GNDGLFSSLVEFHGLLVNGEWQRMPLPRAPLNEVLATTRPFFGNEAMEYRAGTQTRIGAF 247 Query: 270 -HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 + P + + L+ PF+LT + A D+ Sbjct: 248 LGIKEYPTPTAP--------GMFSALLTAPFPFVLTQSFTFL--------AKSTATDMMS 291 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC-----------KDNN 377 + A +A+E + L S + V + ++ + Sbjct: 292 RQHHRMAAAGDLAVSQAEELKDALDDLMSNRFVVGDHHFSLHVLADTYDGLSEAEGRPRL 351 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 + + G + F LP G K S Sbjct: 352 KQLNDNVARARYLLGDAGMVVAREDLALEAAFWAQLPGNFGYRSRK--------APVTSR 403 Query: 438 NVANLMPLV-------ADNPLTPAGLLAPTYRNQLAFIDIFFRGM-------NNTNYNMA 483 N A + P N A + T + + ++ Sbjct: 404 NFAAMSPFHNFPTGRATGNYWGDALTMFTTRAGSPYYFSLHASDPRSRDGGSRRDVGHIT 463 Query: 484 VCGTSGAGKTGLIQPLIRSVL-DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFN 539 G G GKT L+ + ++ VVFD +G L +GG YL +G N Sbjct: 464 GVGPVGTGKTTLLGFCMVAICNRLDATQVVFDKDEGLHILVRALGGQYLPLKNGAPTGCN 523 Query: 540 PFANITDIDQSAERVRDQLS--VMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 P I + E +R L VM +P L E L QA+R + + + R+ + Sbjct: 524 PLQLDDSIADNVEFMRHWLRRLVMRTPGETLTVRQEDDLDQALRGTLKLERSFRRLSRLA 583 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTAN--GTYGQYFNSDEP---SLRDDAKM 652 FL + +D E M L ++ A+ G Y F+++ L + Sbjct: 584 AFL-DITDPEG-------------MHARLRRWCASEHGDYAWVFDNEHDHVAPLLARHAL 629 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 V ++ D + + L + + + +DE +LL + +F Sbjct: 630 VGFDVTDFLDNEVVRAPLTLYLFHLVNRMV----DGRPLVCWMDEFAKLLS--DPAFAKF 683 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + G T R+ T TQ+ S ARA + KI+ ++ +Y + Sbjct: 684 AKNGLETWRKKNANIATFTQSTSHVLD---SGIARAIVEQTPTKILFPNPEADYDEYTRG 740 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFE 830 + + +I + + FL++ + S +L + A+ S + Sbjct: 741 F--NLTDREFALIKQ---EIEPGSRQFLIKQNHVSVVAQLDLHGFDDALHVISGRTGNVR 795 Query: 831 FVQQKRK-EGLSIHEAVWQL 849 +++ G + + Sbjct: 796 LMRELIAICGPDPAQWLPSF 815 >UniRef50_Q4UW68 VirB4 protein n=7 Tax=Xanthomonadaceae RepID=Q4UW68_XANC8 Length = 817 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 132/869 (15%), Positives = 263/869 (30%), Gaps = 117/869 (13%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFML--EAIPINGANESIVEALDHMLRTKLPRGIPLC 97 S + + S L + +P G +E +E + + Sbjct: 8 ISEFVSISTHVAPSVLKTTGGDYLLIWHLAGLPFVGRDEFELEQRHNTFNRLVQTLRAPD 67 Query: 98 IHLMSS--QLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 ++ V R R+ SG + FN Y A ++Q + + + Sbjct: 68 FANVAFWVHDVRRR-----RKIGNSGRFKQSFNQALSDEYYAALSSQKIMQNELYFSMIY 122 Query: 156 RHY----RVFISYCSPSKKKSRAD--ILEMENLVKIIRASLQGASITTQTVDA------- 202 R R+ P K + + I ++ L + A L+ S + Sbjct: 123 RPVVTGKRLVEKSGDPDKIRVEEEQAIAKVIELATNVEAVLKDYSPYRLGMYEAKNGVVF 182 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS 262 ++ +G ++N + + + + Y ++ + V +G N Sbjct: 183 SETLEFLGYLLNRIDEPVPVLQAPVAAYLPVSKHMFANKTGDFVIR-------TPDGINH 235 Query: 263 TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK 322 I ++ + + +LN + +++T + + Sbjct: 236 FGAI--LNVKEYADGTYP--------GILNGLKYLDFEYVVTHSFSPVGRHDALKVLERT 285 Query: 323 YMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALE 382 + S + ++ + SG + Y + + D+ E Sbjct: 286 KGMMISSGDKS--------SSQIRDLDLAMDDVASGNFVLGEYHFTVAVYS-DSQEKLAR 336 Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 GF +F + LP + S N L Sbjct: 337 QIATTRAELSNAGFVSSKEDLAIASSFYSQLPGNWR--------FRTRIANLSSLNFLGL 388 Query: 443 MPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSG 489 PL +NP A T Q + + + N V G SG Sbjct: 389 SPLHNFAQGKQHNNPWGDAVTTLQTTNGQPYYFNFHATHPAENSLGEKAIGNTMVIGKSG 448 Query: 490 AGKTGLIQPLIRSVLDSG--GFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANI 544 GKT LI L+ V FD G + GG YL +G FNPF Sbjct: 449 TGKTALINFLLSQVQKFDPVPTIFFFDKDRGAEIFVRACGGNYLALENGSPTGFNPFQCE 508 Query: 545 TDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNAS 604 ++ + + + + + + V+ E + +AV + + + L N Sbjct: 509 SN-EVNTQFLAELIKVL-GGKTEYSSREEEDIYRAVGGMLDTPMHLRSMSNFRKSLPNMG 566 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD-AKMVVLELGGLEDR 663 D + L ++TA + G F++ ++ A ++ + + D Sbjct: 567 DDG--------------LYARLRRWTAGNSLGWVFDNPVDTIDLTRASIIGFDYTDVIDN 612 Query: 664 PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRH 723 + V V+ L+ +E + + V+DE W++LD + + EF + +T R+ Sbjct: 613 VEVRVPVINYLLHRLEALI----DGRPLIYVMDEFWKILDGE-GGLKEFAKNKQKTIRKQ 667 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 G I TQ+ D AS A A ++ ++L Y + Sbjct: 668 NGLGIFATQSPEDAL---ASDIAAALIEQTATMVLLPNPNASRDDYIDGLK--LTDAEYQ 722 Query: 784 MIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKEG-- 839 ++ D+ FL++ + S+ +L + + A+ SS + E + Q Sbjct: 723 VVVSL----DERSRCFLVKQGHASAVCQLNLRGMDDALSVISSSTDNIEIMHQILSRKAG 778 Query: 840 --------LSIHEAVWQLAWKKSGPEMAS 860 L+ + + + G Sbjct: 779 KLGVSVGQLTPEQWLEDFYANRRGSGKRK 807 >UniRef50_P54910 Conjugal transfer protein trbE n=24 Tax=Alphaproteobacteria RepID=TRBE_RHIRD Length = 820 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 109/860 (12%), Positives = 250/860 (29%), Gaps = 125/860 (14%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLR---TK 89 S P F+ L+PY + + D ++ G+ + ++ + + ++ Sbjct: 9 HSGPSFADLVPYAGLVDNGVILLKDGSLMAGWYFSGPDSESSTDAERNDVSRQINAILSR 68 Query: 90 LPRGIPLCIHLMSSQ--LVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE 147 L G + + + + + AER + + L Sbjct: 69 LGSGWMIQVEAVRVPTADYPKESDCHFPDLVTRAIDAERRAHFQKERGHFESRHALILTW 128 Query: 148 GMNLPLTLRHYRVFISYCSPSKKKS-RADILEMENLVKIIRASLQGASITTQTV------ 200 P R S + + ++ + L ++ + + Sbjct: 129 RPPEPRRSGLTRYIYSDTASRSATYADKALESFSTSIREVEQYLANV-VSIRRMMTRETS 187 Query: 201 --------DAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + + + + + + L Sbjct: 188 ERGCFRVARYDELFQFIRFCVTGQNHPVRLPEIPMYLDWLVTAELQHGLTPLI------- 240 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + + P ++ +LN + + + V D Sbjct: 241 ---------ENRFLGVVAIDGLPAESWP--------GILNALDLMPLTYRWSSRFVFLDA 283 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAK--------EWGELRQRLGSGQSSVVS 364 + + ++K + + + F + + E + S + Sbjct: 284 EEARANLERTRKKWQQKVRPFFDQLFQTQSRSLDQDAMMMVAETEDAIAEASSQLRAYGY 343 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 Y I F +D E + + + GF N FL+ LP ++ + + Sbjct: 344 YTPVIVLFEEDQAR-LQEKCEAVRRLIQAEGFGARIETLNATDAFLSSLPGVSYANIREP 402 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPLT-----------PAGLLAPTYRNQLAFIDIFFR 473 L + N+A+L+PL + + L+ + +++ Sbjct: 403 LIN--------TRNLADLIPLNSVWSGSAVAPCPFYPPASPPLMQVASGSTPFRLNLHVD 454 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL- 531 + + + G +G+GK+ L+ + G FD G SL + G + Sbjct: 455 DV----GHTLIFGPTGSGKSTLLSLIAAQFRRYSGAQIFAFDKGGSMLSLTLGIDGDHYQ 510 Query: 532 ---------DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRA 582 DG+ L F P A++T A ++A + + + + V Sbjct: 511 IGGDATEGGDGKALSFCPLADLTTDGDRAFAAEWIEMLVALQGVTITPDYRNAISRQVGL 570 Query: 583 SWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 ++ + D V ++ + E+ L YT +G GQ +++ Sbjct: 571 MAESRG--RSLSDFVSGVQ-----------------MREIKDALHHYTVDGPMGQLLDAE 611 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 E L + E+ L + + ++ Y+ R+ + L ++DE W +L Sbjct: 612 EDGLALGS-FQCFEIEELMNMGERN---LVPVLTYLFRRIEKRLTGAPSLIILDEAWLML 667 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 + I + + R+ A + TQ+I D + S + KI L Sbjct: 668 GH--PVFRDKIREWLKVLRKANCAVVLATQSISD---AERSGIIDVLKESCPTKICLPNG 722 Query: 763 AKEFAKYNQLY-PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM 821 A + Y F Q +++ +D + + + + P++ + Sbjct: 723 AAREPGTREFYERIGFNERQIEIVATAIPKRDYY-----VVSPEGRRLFDMALGPVALSF 777 Query: 822 Y-SSDGPDFEFVQQKRKEGL 840 +S D + ++ E Sbjct: 778 VGASGKEDLKRIRALHSEHG 797 >UniRef50_C5F2I9 Type IV secretion/conjugal transfer ATPase n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F2I9_9HELI Length = 821 Score = 342 bits (876), Expect = 5e-92, Method: Composition-based stats. Identities = 141/857 (16%), Positives = 278/857 (32%), Gaps = 105/857 (12%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPR-GIPL 96 F +L Y + E L D ++ GF A I+ + L + + L G Sbjct: 14 FPDILNYASFIDEGILLNKDGSLTAGFYYRAGDISSMTINERNTLSARINSVLKTLGNGW 73 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL--- 153 +H+ S + E + ++ + R +Y L + L Sbjct: 74 AVHIDCS---RIKTENYIDGDTFYQSNIAQILENERKHYFDNVEHFENLFTMIFTYLPPH 130 Query: 154 --TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + + I + +K +S + +N+++ + SL +I I Sbjct: 131 KNISKITDLMIIDETKNKNQSNKILEYFKNILQKLEDSLS------------NYIKIERM 178 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + D + D +N+ + + + + L GR+ + Sbjct: 179 LPRTAIDEYNNEYILDDMLEYINFCICGERQKIILPNAPMFLDCLLGGRHFETGMYPRID 238 Query: 272 ARNPEIAFLWNMA-DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 ++ I + ++Y N+LN ++ + + D + N ++K+ Sbjct: 239 NQHIGIIAIEGFPSESYPNILNALTELNFDYRFNTRFIFLDDFDAQNSLNKYRKKWQQKT 298 Query: 331 KTSYAKWFPSVEKEA--------KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALE 382 K + + +E +G Y NI F +DN E+ Sbjct: 299 KGWVDQLLDRPARRLDNHAVLMVQELDSALAESKTGLLGYGYYTANIVVFDRDN-ESLEH 357 Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 +DI GF + N + +L LP L + + + N+ +L Sbjct: 358 KLKDIRKVLENLGFLSRTETINSVEAYLGTLPGFVYPNLRRPVLN--------TLNLTHL 409 Query: 443 MPLVADNPL------------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 +PL + +P + T N +++ + + + G +G+ Sbjct: 410 IPLASIWAGEKYNPSDKFPPNSPPLMQVVTSGNTPFRLNLHVSDL----GHTLIFGPTGS 465 Query: 491 GKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL----DGETLRFNPFANIT 545 GK+ L+ + S FD G + GG++ D +L F P ANI Sbjct: 466 GKSTLLANIFLSFQKYKNAKIYAFDKGQSLLAPTLATGGIHYNIAGDHSSLAFAPLANIK 525 Query: 546 DIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 + A + + N N+ H+ L+ +A+ + K + + V L++ Sbjct: 526 TEAEIAWAEFWIETCLKLQNVNVTPKHKKLIHEALISHINTK--STSLTEFVSALQD--- 580 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS 665 +++ L YT +GT G F+S+E L + E+ L Sbjct: 581 --------------NDLRDALSYYTISGTGGFLFDSEEDKLSLSN-ITTFEIEELMSLGD 625 Query: 666 LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTG 725 + ++YI NR+ R L +IDE W L + I + R+ Sbjct: 626 QYIV---PALLYIFNRIERGLDGSPTLLIIDEAWIALKHS--AFKDKIVNWLKVLRKANV 680 Query: 726 AYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK-------EFAKYNQLYPDQFL 778 A + TQ++ D S + KI L S A Y+ Sbjct: 681 AVVMATQSLSD---SAKSGILDVLQESCPTKIFLPNSDAFKKGTETTLAPYDFYKIFGLN 737 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS-SDGPDFEFVQQKRK 837 +Q +I ++ +++ + L + + A SD + V Q + Sbjct: 738 DVQIGIIANAIPKREYYYT-----SPLGTRLFNLALGKTNLAFTGISDKIGVKRVNQLYE 792 Query: 838 EGLSIHEAVWQLAWKKS 854 + E ++ +K Sbjct: 793 KHK--EEWAYKWLEEKE 807 >UniRef50_P17794 Protein virB4 n=18 Tax=root RepID=VIRB4_AGRT5 Length = 789 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 121/843 (14%), Positives = 244/843 (28%), Gaps = 97/843 (11%) Query: 43 LLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALDHMLRTKLPRGIP 95 LPY + + + + D ++ G E N A + +LR + Sbjct: 15 YLPYVGHVSDHIVLLEDGSIMTMAHVSGMAFELEDAEMRNAR-CRAFNTLLRNIADDHVS 73 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 + HL+ V R + + ++ + + Sbjct: 74 IYAHLVRHDDVPPSPARHFRSAFSASLSEAFEERVLSGKLLRNDHFLTLIVSPRAALGKV 133 Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINH 215 R R F + A +E+L ++ +L+ + + + + D++ + Sbjct: 134 R--RRFTKRYRQKENDLTAQTRNLEDLWHLVAGALEAYGL--RRLGIREKQDVLFTEVGE 189 Query: 216 NPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR--ENGRNSTARILN-FHLA 272 + R P V S + D + G R E + + + + Sbjct: 190 ALRLIMTGRFTPVP-------VVSGSLGASIYTDRVICGKRGLEIRTPKDSYVGSIYSFR 242 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P +LN LS+ P +LT + + + HS+ +LK + Sbjct: 243 EYPATTRP--------GMLNVLLSLDFPLVLTQSFSFLTRSQAHSKLSLKSSQMLSSGDK 294 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 + + + E L S + + ++ +++ + D + Sbjct: 295 AV--------TQISKLSEAEDALASNEFVLGAHHVSLCIYAND-LNNLADRGARARTRLA 345 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 G ++ + + LP K S N A L+ + Sbjct: 346 DAGAVVVQEGIGMEAAYWSQLPGN--------YKWRTRPGAITSRNFAGLVSFENFPEGS 397 Query: 453 PAGLL------APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV--- 503 +G T + T A+ G G GKT L+ ++ + Sbjct: 398 GSGHWGNAIARFRTNGGTPFDYIPHEHDVGMT----AIFGPIGRGKTTLMTFILAMLEQS 453 Query: 504 -LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLS 559 +D G V+FD G + L GG YL G P + + S + +R+ + Sbjct: 454 MVDRAGAVVLFDKDRGSELLVRATGGTYLALRRGAPSGLAPLRGLENTAASHDFLREWIV 513 Query: 560 VMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 + +G + L++ + + I + +FL + Sbjct: 514 ALIESDGRGGISPEENRRLVRGIHRQLSFDPHMRSIAGLREFLLHGPAEGA--------- 564 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 L ++ G F+ + ++ D + ++ L + + A L+ Sbjct: 565 -----GARLQRWCRGNALGWAFDGELDEVKLDPSITGFDMTHLLEYEEVCAAAAAYLLHR 619 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 I + + + DE L N K ++K T R++ G I TQ Sbjct: 620 IGAMV----DGRRFVMSCDEFRAYL--LNPKFAAVVDKFLLTVRKNNGMLILATQQPEHV 673 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 S + KI + + Y Q Sbjct: 674 LE---SQLGASLVAQCMTKIFYPSPTADRSAYIDGLKCTEKEFQ-----AIREDMAVGSR 725 Query: 798 SFLLQVENHSSWHRLFV--DPLSRAMYSSDGPDFEFVQQKRK-EGLSIHEAVWQLAWKKS 854 FLL+ E+ S + A+ S F Q RK +G + + + + Sbjct: 726 KFLLKRESGSVVCEFDLREMREYVAVLSGRANTVRFADQLRKVQGDNPSAWLSEFMARYH 785 Query: 855 GPE 857 + Sbjct: 786 EAK 788 >UniRef50_C3WX74 Conjugal transfer protein TrbE n=3 Tax=Fusobacterium RepID=C3WX74_9FUSO Length = 798 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 106/844 (12%), Positives = 258/844 (30%), Gaps = 102/844 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLRT---KLPRG 93 + S +P+ + + + T+ ++ + ++ ++ L +L +G Sbjct: 19 KLSSYVPWICLIDKGVVLNKNGTLQKTLKYRGYDLDSSTVYELKNINAKLNDVIKRLGQG 78 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 L + + D IE + + ER + ++ + + Sbjct: 79 WSLNVEA-RRKRCTDYIEAENEILAIDIIEKERKLNFLENEHFESEY--YLTIVQLIPTD 135 Query: 154 TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMI 213 + + + + K I + + +D + + + Sbjct: 136 NSKKVGEIFLEYAKKSEILDKTLENFNKEFKKILNLFKEIFLEVTELDDEETYTYLHSCV 195 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLAR 273 + D + + L + K+R + + Sbjct: 196 STKTDKVVVPEIPYAMANYLCDSDLVGGLKPKLRGKEI---------------RCISIQG 240 Query: 274 NPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTS 333 P + ++ P+ ++ +++ S+ KY ++ + + Sbjct: 241 FPNY--------TVPGFFDVLNRLNIPYRWITRFLMLSKLEALSKMEKKYKNIFSQRLSL 292 Query: 334 YAKWFPSVEKEAKEW-----GELRQR---------LGSGQSSVVSYFLNITAFCKDNNET 379 + + + + E +E + + L +G ++ D+ + Sbjct: 293 FQRVYAELTGEKEENSRKLNEDALNKANEVRTQIALTAGDYVSQGFYTCTLIVDGDSIDE 352 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 E I + GF I N + FL +P + + + + Sbjct: 353 VEERVDVISKTINNMGFITIEESINSVEAFLGSIPGNITNNIRMPILN--------TITL 404 Query: 440 ANLMPLVADNPLT--------PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 ++L+P+ + P + T + +I + + A+ G +G G Sbjct: 405 SHLLPVSSVWGGDSWNKHLNAPPLIYTKTKGSTPFRFNIHIEDI----GHSAIVGPTGYG 460 Query: 492 KTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG--ETLRFNPFANITDID 548 K+ L+ + S + FD + L +GG + D + L F P ANI ++ Sbjct: 461 KSVLLGLIASSFMKYKDSRVYFFDKDASSRVLTYAVGGEFHDLGNDELSFQPLANIEIVE 520 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQ 608 + L ++ N + + + +A+ I + + + Sbjct: 521 EKEWAYGWILEILEQENVKVSPTQKEKIWKALDNLAKTPIELRTISNFYTSVND------ 574 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 E+ L Y G G+YF+SD+ +L ++ V E+ + + Sbjct: 575 -----------REIKEALIPYKIGGALGKYFDSDKDTLNF-SRWQVFEMNQVINNKK--- 619 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 + L+ YI R+ + + ++DE W F N I + + R+ + I Sbjct: 620 -GITPLLSYIFRRIENSLDGSPCIIILDECWMF--FDNPIFAAKIREWLKVLRKKNCSVI 676 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY-PDQFLPLQRDMIGK 787 TQ + D + S K+ L Y +Y + ++I K Sbjct: 677 FATQELGDILN---SKLFTTVLDACQTKVFLPNPNAFADNYIPIYQKFGLNKTEIEIISK 733 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM-YSSDGPDFEFVQQKRKEGLSIHEAV 846 K+ ++ + S L + + ++ SSD ++ ++ + ++ Sbjct: 734 ATKKKEYYY-----KSTKGSRLFELDLKEKTLSLIASSDLAKQNKAKELKEIYRNANDFT 788 Query: 847 WQLA 850 + Sbjct: 789 REWL 792 >UniRef50_B1Y1W2 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1W2_LEPCP Length = 830 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 129/851 (15%), Positives = 247/851 (29%), Gaps = 99/851 (11%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLRTKL 90 +R +P+ + + L+ +P A+E ++ L + L Sbjct: 29 QAHRENPLARFVPFSSLVSPHDVISRGGDYLRVWRLDGVPFECADEHLIAERHEALCSLL 88 Query: 91 PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMN 150 + + R+ + + F Y + A+Q + + Sbjct: 89 RSLAGGQWAVWT-----HRLHRRTHDALTDPREPG-FARELSQAYQRRLASQPMMSNELY 142 Query: 151 LPLTLRHYRVFISYCSPSKKKSRAD--------ILEMENLVKIIRASLQGASITT----- 197 L L R IS SK +SR + ME ++ L+G Sbjct: 143 LTLVYRPNVSRISRALQSKHRSRQAIAEAQAEALRVMEERSALVDRVLRGFGPQLLGVRE 202 Query: 198 -QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR 256 + + + ++N + + L V + L D L L Sbjct: 203 DRDQRWSEVAEFLSYLVNGRSRPIPARTGPLY--------RVLPTTRLSFGGDKLELR-- 252 Query: 257 ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTH 316 + + + +L+ L + FI T + + + Sbjct: 253 --HGDQRRYAALVDIKEYADAVEP--------GILDTLLYEASEFIETQSFSILPRRDAM 302 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 L+ L V + E LG GQ + Y ++ F D Sbjct: 303 RALELQRDQLIASDD--------VVSSQVAEMDVALNELGDGQFCMGEYHYSLVVFGDDV 354 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAES 436 + Q I + ++ + +P ++ + + Sbjct: 355 ADAGRRASQAIGAVGEASSLQMAPVDLVADAAWFAQMPGNWS---WRPRDAKLSSRAFAA 411 Query: 437 FNVANLMP--LVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTS 488 + P NP A L T Q ++++ + N + G++ Sbjct: 412 LACGHNFPRGKRDGNPWGEALALLRTPSGQPFYLNLHSSPEGEDSADKKLPGNTLIIGST 471 Query: 489 GAGKTGLIQPLIRSVLDSG--GFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFAN 543 G GKT L L+ V+FD+ G + +GG YL G NP Sbjct: 472 GVGKTTLEMFLLVLTRKWQPAPRLVLFDLDRGCEIAVRALGGEYLAFEAGRPTGCNPLQR 531 Query: 544 ITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNA 603 ++ + + +A+ L E + AVRA + + R V L Sbjct: 532 EPTPERLQFWEQLIRTCVATTALPLLPSDERAIADAVRAVAMMPAHLRRFSTVRQNLPKT 591 Query: 604 SDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA--KMVVLELGGLE 661 + + + L ++ G G F+ L + ++V + Sbjct: 592 GE--------------NSLYERLGRWCDGGALGWVFDQAPDQLGLLSATRVVGFDTTEFL 637 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 D P + VM L+ M + + VI E W+ LD +F ++ +T R Sbjct: 638 DLPEVRTPVMMVLL----QMMDEWVNGERLIYVISEFWKALDHA--VFSDFAKQKQKTIR 691 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + G I TQ+ D R S KI L +Y + + Sbjct: 692 KQNGLGIFDTQSPSDVL---RHPIGRTMIEQSVTKIFLANPEAVHDEYVDGF--GLSEAE 746 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPDFEFVQQKRKE- 838 + + A + F L++ S+ L + L + S+ + + + R + Sbjct: 747 YETVRSLSAQGGRRF---LVKQGATSAICELDLSGLEDFITVLSATTDNVALLDELRSQV 803 Query: 839 GLSIHEAVWQL 849 + L Sbjct: 804 SHDPKAWIPLL 814 >UniRef50_Q2NKG6 TrwK protein n=18 Tax=Proteobacteria RepID=Q2NKG6_ECOLX Length = 823 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 115/873 (13%), Positives = 246/873 (28%), Gaps = 112/873 (12%) Query: 43 LLPYRDYNQESGLFMNDTTMGFMLEAIPIN--GANESIVEALDHMLRTKLPRGIPLCIHL 100 +PY + ++ + + + + + A+E+ V L L + L Sbjct: 19 FIPYSHHVTDTIISTKNAEYLSVWKIDGRSHQSASEADVFQWIRELNNTLRGISSANLSL 78 Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV 160 + + + E+ + + Y + + + Sbjct: 79 WT-----HIVRRRVYEYPDAEFDNVFCRQLDEKYRESFTGYNLMVNDLYLTVVYRPVSDK 133 Query: 161 FISYCSPSKKKSRAD--------ILEMENLVKIIRASLQGASITTQTVDAQ------AFI 206 +S+ + ++++ I +E++ + + S + +V + A + Sbjct: 134 VLSFFAKRERETPDQKKHRQESCIKALEDINRTLGQSFKRYGAELLSVYEKGGHAFSAPL 193 Query: 207 DIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARI 266 + + ++N + R + Y +N ++ R Sbjct: 194 EFLARLVNGEHIPMPICRDRFSDYMAVNRPMFSKWGEVGELRS----------LTGLRRF 243 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 + + LN L F+LT + V + +L Sbjct: 244 GMLEIREYDDATEPGQ--------LNVLLESDYEFVLTHSFSVLSRPAAKEYLQRHQKNL 295 Query: 327 EKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 + + +E E +L SG + + +T + + + + Sbjct: 296 IDARDVATD--------QIEEIDEALNQLISGHFVMGEHHCTLTVY-GETVQQVRDNLAH 346 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + + LP + S N + P Sbjct: 347 ASAAMLDVAVLPKPVDLALEAGYWAQLPANW--------QWRPRPAPITSLNFLSFSPFH 398 Query: 447 -------ADNPLTPAGLLAPTYRNQLAFIDIF------FRGMNNTNYNMAVCGTSGAGKT 493 NP PA + T + + N + G S +GKT Sbjct: 399 NFMSGKPTGNPWGPAVTILKTVSGTPLYFNFHASKEEEDATDKRLLGNTMLIGQSSSGKT 458 Query: 494 GLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQS 550 L+ L+ V FD G + MGG YL GE FNPF D Sbjct: 459 VLLGFLLAQAQKFKPTIVAFDKDRGMEISIRAMGGRYLPLKTGEPSGFNPFHAPAD---- 514 Query: 551 AERVRDQLSVMASPNGNLDEVHEGLLLQ----AVRASWLAKENRARIDDVVDFLKNASDS 606 P+ E + A + A + D +D Sbjct: 515 ----------ARKPDFPQTVREEARGCRWRGHAPGRGRNRPGHYAMMSDSIDKSLRRLSL 564 Query: 607 EQYAESPTIRSRLDE---MIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED 662 +D + L ++ G YG F++ +L ++ ++ D Sbjct: 565 LLQFLPNPRSDDMDARPTVHARLVKWCEGGDYGWLFDNPTDALDLSTHQIYGFDITEFLD 624 Query: 663 RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 P VM L+ E+ + + + V DE W+ L ++ + + +T R+ Sbjct: 625 NPEARTPVMMYLLYRTESMI----DGRRFMYVFDEFWKPL--QDEYFEDLAKNKQKTIRK 678 Query: 723 HTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQR 782 G ++ TQ D S+ A+ + I L ++ Y Q + + Sbjct: 679 QNGIFVFATQEPSDALE---SNIAKTLIQQCATYIFLANPKADYEDYTQGFKLTDSEFE- 734 Query: 783 DMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI 842 ++ FL++ + S+ + + R + + + +F + + Sbjct: 735 -----LVRGLGEFSRRFLIKQGDQSALAEMNLGKF-RTIVDGETVERDFDDELLVLSGTP 788 Query: 843 H--EAVWQLAWKKSGPEMASLEAWLEEHEKYRS 873 E + + L +L+ + RS Sbjct: 789 DNAEIAESIIAEVGDSPAVWLPIFLDRVKAERS 821 >UniRef50_B5EKP3 CagE TrbE VirB component of type IV transporter system n=3 Tax=Acidithiobacillus RepID=B5EKP3_ACIF5 Length = 840 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 128/894 (14%), Positives = 260/894 (29%), Gaps = 137/894 (15%) Query: 40 FSRLLPYRDYNQ-------ESGLFMNDTT---MGFMLEAIPINGANESIVEALDHMLRTK 89 LL E + + GF + + + +EAL Sbjct: 14 LPDLLNIAFLVDGWQTDAGEMAIALQKDGSFLAGFRYDGPDLESQSTQDLEALSATWNNA 73 Query: 90 ---LPRGIPLCIHLMSSQL----------VGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 L + + + D + + + +E + ++R Y Sbjct: 74 IARLGTDWGVHVTAIREPADGYIDESECAFRDPVSRLIEAERRAQFGSETHHYVSRYYLT 133 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGA--S 194 A T + + + + P + A + ++I L Sbjct: 134 VAWRTPIDAEVQLVQSMIQKK-----AGKQPGQLADAAFRDTLARYRQVIEVILGIFRHG 188 Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 + +DA A + + E + + R + + + + + + + Sbjct: 189 YRVKAMDADALLTHIHECLTGATHRVNAPRIPAYLDALIGHHDFVGGLEPSMDGEEI--- 245 Query: 255 LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 + P + F +L S+ P TL + D Sbjct: 246 ------------RVVTVLGYPSMTFPE--------MLENLHSLPIPLRYTLRFLPLDPPD 285 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPSVEKEAK--------------EWGELRQRLGSGQS 360 ++ + + EA+ + + G Sbjct: 286 AVADMAKIRDRWFGSRANMKSLLTEKMTGEAQGQLSADDTVVNLAYDAKQAVNEAREGAV 345 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 ++ L++ D + + + I G+ N + FL LP + Sbjct: 346 KFGNFTLSVVLRSAD-EKVLADRIKAIKTFLDNAGYVAHLETTNTVEAFLGSLPGHLYEN 404 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLT----------------PAGLLAPTYRNQ 464 + + L S NVA+ P P L A T N Sbjct: 405 IRRPL--------MHSLNVADFAPKTEIWAGEARCPSPLMNLSDGRKAPPLLYAATTGNT 456 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLC 523 +++ + + + G +G GK+ L+ L + FD G +L Sbjct: 457 PFRLNLHVGDL----GHSLIAGMTGGGKSTLLALLAAQWQRYPDSRVIAFDKGMSLYALT 512 Query: 524 ENMGGVYLDG----ETLRFNPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQ 578 E MGG + D L F P ++ D + A D + +A+ G + + Sbjct: 513 EAMGGQHYDLNGPTSDLFFAPLQHVDDPAE-AAFAADWVEALATLQGMTITSTERSAIRD 571 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 AV + ++ ++N + L YT G G+ Sbjct: 572 AVHGLARESG--RSLTALLQMIQNRG-----------------IKDALQYYTLTGQTGKL 612 Query: 639 FNSDEPSLRD-DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE 697 +++ L DA M+ E+ L + V +++Y+ +R+ + L ++DE Sbjct: 613 LDAESDGLSMADASMITFEMSHLMNGGPAEHRVTVPVLLYLFHRIEQMLDGRPTLILLDE 672 Query: 698 GWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKI 757 W LD N + + + R+ A + TQ++ D + + + KI Sbjct: 673 AWTFLD--NELFLAKLRQWLKELRKKNAAVVFATQSLNDLKNSSLLPVLK---ESCPTKI 727 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL 817 L A LY D L ++ + K ++ L + + P+ Sbjct: 728 FLPNRAATSPDLKPLYIDMGLNDRQIELVVASTPKQDYY----LSTPEGQRRIQFGMGPV 783 Query: 818 SRA-MYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEEHEK 870 + A SD + + V + + + W +AW K + + W+ E Sbjct: 784 TLAFCGVSDPREVKRVAELKTQHGDR----WPIAWLKERLSPSIRDGWVSYAES 833 >UniRef50_B5TTQ0 TraE n=3 Tax=environmental samples RepID=B5TTQ0_9BACT Length = 820 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 117/876 (13%), Positives = 256/876 (29%), Gaps = 106/876 (12%) Query: 25 SAKANEVLGEMSFP-QFSRLLPYRDYNQESGLFM-NDTTMG-FMLEAIPINGANESIVEA 81 +V + S LP+ ++ + + + N + + LE I I+ Sbjct: 1 MRSKQQVKDSANAEVAISDYLPFGNHVSNNVIKLKNGEYIATWKLEGISFETVEADIIRI 60 Query: 82 LDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMK---A 138 L + + +I G+ E + + YY + Sbjct: 61 RKEGLNNFYRALGGGHFAVWT-----HKIRRGVNERLNGVYENDFIADFNERYYQQFQGE 115 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 Q + + R+ + S + + A +++ + I+ + + Sbjct: 116 KNKQMATELYLTILYRPEISRLTKIFKSKASRDPVALKKQIKRDLDILDDVAKQVEASLY 175 Query: 199 TVDAQAFIDIVGE--MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR 256 + + + + + + L + L + D + + L G + Sbjct: 176 HYNPERLATYTKKGFVYSEMCNLLGFLTNGVWEEIPLRQ----ANLDQYIPSSRLFFGDK 231 Query: 257 EN-----GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 + + + P ++ S + N L + +I T + V Sbjct: 232 NGYLQIKHPEAQKYVGFLDIQEFPRLSE--------SGMCNSILYGNYEYIETQSFTVYG 283 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 + + L ++E ++ SG + Y + Sbjct: 284 KRDAVDKLKTIKGQLNS--------VEDVSDQEIRDIDLAMSEANSGNFQLGEYHYTLAI 335 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 F N+ AL V + GF++ + + L Sbjct: 336 FGDSPNQVALNVSSARTALSDEAGFKMAVIDTVPECAWFSQLAGNFN--------MRPRE 387 Query: 432 QRAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN----- 479 S N + L P NP A L T Q + + + Sbjct: 388 AYLTSLNFSALSPFHNFARGKRDGNPWGEALALFKTPSGQPFYFNHHVSPDKQDSTDDKM 447 Query: 480 -YNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL---DGE 534 N V GT+G GKT L+ ++ V FD G + +GG Y G Sbjct: 448 PGNTCVIGTTGVGKTTLVMAMMMFACKYKNLKGVFFDKDRGAEIGIRRIGGQYYALERGV 507 Query: 535 TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA--KENRAR 592 FNP + + + V + ++ N + + QAVR R Sbjct: 508 PTGFNPLQLPP-TETNIQFVEKLVKILVGGVRN--AAEDLEISQAVRTIMRDDMPLELRR 564 Query: 593 IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT----ANGTYGQYFNSDEPSLRD 648 + + LK D + L ++ +G F++ + Sbjct: 565 LSALYMNLKVNGGG-------------DSLQDRLAKWCNTADHDGNLSWVFDNPYDTQDF 611 Query: 649 DA---KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + + D P + +M L+ ++ + + +DE W+ L Sbjct: 612 SKAKMPIFGYDYTEFLDDPEVRTPIMAYLLHITDSLI----DGSPFIYWMDEFWKPL--T 665 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + +F + +T R+ G + +TQ+ D S + S +I L + Sbjct: 666 DEYFKDFAKDKQKTIRKLNGLGVFMTQSPSDVLD---SDIGKTMVEQSVTQIFLPNPRAD 722 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYS 823 + Y + P + ++I + ++ FL++ + S+ ++ + + + S Sbjct: 723 YDDYVNGFK--VTPQEFEIIKEL----EENSRMFLVKQGSRSALCKMDLGEMRDVLQIIS 776 Query: 824 SDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGPEM 858 + E ++ E G ++ + + + Sbjct: 777 GSKDNVELLENLMNEVGEDPNDWGELFLQRIAERKK 812 >UniRef50_D2LJR2 CagE TrbE VirB component of type IV transporter system n=3 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJR2_RHOVA Length = 834 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 122/898 (13%), Positives = 254/898 (28%), Gaps = 141/898 (15%) Query: 41 SRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPR-GIPLC 97 + LL Y + + D ++ GF+ A + + ++ + L R G Sbjct: 15 ADLLNYASLIGDGLVLCKDGSLLAGFLYRGPDSQSATPAELNSVTSRINASLARLGSG-- 72 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT--- 154 L + R+ + + + A A + ++ E L Sbjct: 73 FALWIDAV---RLPAAAYPETDASHFPDPITAAIDAERRRQFLSEGAHFETEYALLIAYT 129 Query: 155 --LRHYRVFISY------CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA---- 202 LR S + I E +++ + L + + + A Sbjct: 130 PPLRRTTKIADLIYDDDPKSEPESPGDRQIKIFERVLRDLEDGLSDI-LRLRRMKAYRVS 188 Query: 203 ---------QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 I+ V + + L + + L Q + K+ ++ Sbjct: 189 DESGRSHLQDELINYVSFAVTGHLSPLNVPPCPMYCDAWLGGQELYGGDTPKMGDHFI-- 246 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 + P + N+L +++ F + + D Sbjct: 247 -------------AAVAIEGFPAESCP--------NMLARLETLAIAFRFSSRFIPLDAH 285 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWF--------PSVEKEAKEWGELRQRLGSGQSSVVSY 365 ++ + + +A+ F A + S + Y Sbjct: 286 ESLGLLRAYRRKWRQWMRGFFAQVFRTEGGVVNEDAALMAAQAENAITDASSNLVAFGYY 345 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + +N + L+ + I R+ GF N + FL LP A + + L Sbjct: 346 T-PVLILMGENRDALLDEARLIARELRREGFASRVETVNTLEAFLGSLPAHAVPNVRRPL 404 Query: 426 KEAGVVQRAESFNVANLMPLVADNP------------LTPAGLLAPTYRNQLAFIDIFFR 473 S N+A+LMP + P +P L T + +++ Sbjct: 405 --------LHSLNLADLMPASSIWPGLPVCPSPLFPEGSPPLLYGATTGSTPFRLNLHVG 456 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYLD 532 + + + G +GAGK+ L+ + VFD G +L G + D Sbjct: 457 DV----GHTLIFGPTGAGKSTLLALIAAQFRRYRHARITVFDKGRSLFALAHAAGAQHYD 512 Query: 533 G----ETLRFNPFANITDIDQSAERVRDQLSVM--ASPNGNLDEVHEGLLLQAVRASWLA 586 + P + + D L+ G + + +AVR Sbjct: 513 LAGDTGSPGLCPLGRL-ETALDVAFAEDWLATCYELQQGGAPTPRQKEEIHRAVRLMRET 571 Query: 587 K-ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 K + D + +++ ++ L YT G G ++ Sbjct: 572 KSGEGRSLTDFIATVQD-----------------KDIRAALGTYTIEGALGHLLDARSDG 614 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + A V E+ L + +++Y+ R+ L ++DE W +L Sbjct: 615 IEA-ASFTVFEIEELMALGEKN---LIPVLLYLFRHFERSLTGAPALLLLDEAWVMLGH- 669 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 E I + + R+ A + TQ++ D S + +I+L + Sbjct: 670 -PVFREKIREWLKVLRKANCAVVLATQSLSD---AARSGILDVLLESCPTRILLPNEEAD 725 Query: 766 ------FAKYNQLYPD-QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 A LY + ++ + +++ L + P++ Sbjct: 726 KGGANGIAGPLDLYRLIGLNETEIALLKSAVKKRHYYYT-----SPEGRRLFELGLGPVA 780 Query: 819 RAMYS-SDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 A + S D V+ + + ++ A E + A Sbjct: 781 LAFTAVSSREDVARVRALIEAHG--RDWPRAWLAERGLDTKDIFGA--TEEGSHEEAA 834 >UniRef50_Q1QFG8 Type IV secretion/conjugal transfer ATPase, VirB4 family n=3 Tax=Rhizobiales RepID=Q1QFG8_NITHX Length = 803 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 124/858 (14%), Positives = 251/858 (29%), Gaps = 120/858 (13%) Query: 41 SRLLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALDHMLRTKLPRG 93 + +PY + + + D + G+ E ++ N ++ + ++RT Sbjct: 23 ASHVPYTRHVDDHIIKTRDGLVLTTLKLDGYSFETSDMSEVNARLLGR-NDVVRTLANSR 81 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 L V + ++ S + Y A + + + L + Sbjct: 82 FAL---------VSHIVRREVQPRIVSTFDNALCRELDER-YNAALSKRRMFVNDIYLTI 131 Query: 154 TLRH-------YRVFISYCSPSKK------KSRADILEMENLVKIIRASLQGAS---ITT 197 R + ++ K + + E+ + +R +L G + Sbjct: 132 IRRPLQGQAGTFDAMLTRLLGRKDVAGESVAMQTALAELRDAATAVRENLAGYGARQLGV 191 Query: 198 QTVDA---QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 D ++ + ++N P + ++ + + Sbjct: 192 VRRDGVWFSEPLEFLTLLLNGGLPR---------PMHLPRMNLADALSMKRIFFGHNAIE 242 Query: 255 LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 +R G T + P + + L + FI T + + D+ + Sbjct: 243 VRGAGPEDTRFGAMVSIREYPAQTGPGS--------FDNLLRVPHEFIATQSFAIVDRPE 294 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 + + ++ + + + R L + ++ + + + + Sbjct: 295 AAKQIDRVSRQVDMSDEAGSIVS--------EHLDDARDELLASEAIYGEHHMTVMCLGR 346 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 D E V + N F LP K + Sbjct: 347 DLAEVGAAVTAV-GAALTDRSVIWTREDLNCEPAFWAQLPGNFTYIARKGV--------I 397 Query: 435 ESFNVANLMPLV-------ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGT 487 S N A L A N PA + T + + R + N V G Sbjct: 398 SSKNFAGFTSLHNYPSGRPAGNHWGPAISVFETTSQTAYYYNHHVRDI----GNFTVVGP 453 Query: 488 SGAGKTGLIQPLIRSVLD--SGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFA 542 +G+GKT + + + D G + +GG Y + GE FNP + Sbjct: 454 TGSGKTVFLSFIAAQTQRIQPRPKLLFVDKDRGAEIFIRALGGQYETLVPGEQTGFNPLS 513 Query: 543 NITDIDQSAERVRDQLSVMASP--NGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL 600 + D + E + + M P G L E ++ A+ ++ A + L Sbjct: 514 -LPDSAPNREFLYQLFAFMLRPGKGGELSASEEQVIRNAIASALAAGPAGRTLKAFSTLL 572 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL 660 + IR+ +++ L+ + G FN+DE + + ++ + Sbjct: 573 R-----------GRIRAGEGDLLARLESWMRPDQRGWLFNNDEDRFSLSS-VFGFDMTRV 620 Query: 661 EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 D P + A + + + + + +DEGWRLLD + FI +T Sbjct: 621 LDDPVVRTAALMYIFHRTDELLT----GDPVMIFLDEGWRLLD--DEVFAFFIRDKLKTI 674 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 R+ G TQ+ D KAS+ +S I + Y Q + Sbjct: 675 RKQNGIVGFGTQSAADIVRSKASN---TLIEQTSTNIFFPNPKADDESYKQAFR--LSGR 729 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKRKE 838 + I SFL++ S +L + P + S + R Sbjct: 730 EVAWIRGTVPE----SRSFLIKHGRDSVVAKLNLANMPDLIKVLSGRTETVAELDALRAR 785 Query: 839 -GLSIHEAVWQLAWKKSG 855 G + + G Sbjct: 786 VGDDPAAWLPIFMGRAQG 803 >UniRef50_Q0AD16 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AD16_NITEC Length = 832 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 108/870 (12%), Positives = 244/870 (28%), Gaps = 139/870 (15%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKL---PRGI 94 LL Y E + D ++ GF + S L ++ L G Sbjct: 14 LPDLLNYAALIDEGIVLGKDGSLMAGFYFRGDDAASSTASDSNYLTAIVNNYLLRFGSGW 73 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAA--TQFPLPEGMNLP 152 + I + +A R + + + LP Sbjct: 74 AVWIDNTRLPSPNY---PSPGNSHFPDPVTALIDAERREMFEQNSMYFENEYTAIFQYLP 130 Query: 153 LTLRHYRV----FISYCSPSKKKSRADILEMENLVKIIRASLQ-----------GASITT 197 + R+ + ++ I + + + + L ++ Sbjct: 131 PLRHNSRLSELIYDDDSLNDNSPAQRLIDDFKKTLITLEQGLADLINMRRMRTVTINVEG 190 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE 257 T + ++ + I +L + + L YQ + K+ ++ Sbjct: 191 STYQSDELVNYLHFAITGEEIALRIPDCPMYLDAWLGYQELWPGDTPKLGNKFI------ 244 Query: 258 NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS 317 + P + +LN + + + + ++ + Sbjct: 245 ---------ACVAIDGFPSASEP--------GILNLLDGLPLAYRWSSRFIFLEKHQAIF 287 Query: 318 EANLKYMDLEKKSKTSYAK--------WFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 N + +K + +++ A + SG S Y I Sbjct: 288 SLNRYRLKWRQKIRGFWSQVFKSQKGVINTDALDMATQTESAINDAHSGLVSYGYYTPVI 347 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 +D + + GF N + +L LP + + L Sbjct: 348 VLMHEDRI-HLEKQADYVKRQIDYIGFSARIETVNALEAWLGSLPGQTYPNIRRPL---- 402 Query: 430 VVQRAESFNVANLMPLVADNP------------LTPAGLLAPTYRNQLAFIDIFFRGMNN 477 + N+++L+PL + P +P + T +++ + Sbjct: 403 ----IHTLNLSDLLPLASIWPGLKQNPCDFFPAGSPPLMQTVTTGATPFRLNLHVGDV-- 456 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGF-----------AVVFDMGDGYKSLCENM 526 + + G +GAGK+ L+ + +VFD G +LC+ Sbjct: 457 --GHTLIFGPTGAGKSTLLALIAAQFSRYQSKPGMDGSKLPASVLVFDYGYSLYTLCKAA 514 Query: 527 GGVYLDGETLR-----FNPFANITDIDQSAERVRDQLSVM--ASPNGNLDEVHEGLLLQA 579 G++ D P A+I + + ++ + + +A Sbjct: 515 QGIHYDIGNDSEEIGAVMPLADIDSPAGALWA-EEWIATCYELQALKPPTPQQKTEIHRA 573 Query: 580 VRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 + A + + D V +++ +++ L YT G G Sbjct: 574 IGLLRAAPMHGRSLTDFVAQVQD-----------------NDIQDALSHYTLKGPMGHLL 616 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 + E S+ A+ E+ L +++Y+ R+ +T L +DE W Sbjct: 617 DGAEDSMEL-AQFTTFEVKELMSMGRANA---LPVLLYLFRRIEKTMHGQPVLLALDEAW 672 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIIL 759 +L + E + + +T R+ + + TQ++ D S KI+L Sbjct: 673 AMLG--DPVWREKVREWLKTLRKQNCSVVLATQSLSD---AVRSGLLDVLTEQCPTKILL 727 Query: 760 KQSAKEFAKYNQ-------LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRL 812 + + + +++ +D ++ + L Sbjct: 728 PNKEADQYGTKETPGPADLYTMFGLNKREIEILKNGQYKRDYYY-----KSPLGRRLFEL 782 Query: 813 FVDPLSRAMYS-SDGPDFEFVQQKRKEGLS 841 + PL+ A + SD ++ + Sbjct: 783 GLGPLALAFLAVSDKDKLAEIRYFIDRYAN 812 >UniRef50_Q2YIT8 Type IV secretion system protein virB4 n=43 Tax=root RepID=VIRB4_BRUA2 Length = 831 Score = 330 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 137/875 (15%), Positives = 258/875 (29%), Gaps = 125/875 (14%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEAL--DHMLRTKLPRGIPL 96 + +P+R + + D + + + L L T Sbjct: 16 SLAPFIPFRSQVGPTTVITRDGDFVRTWRIAGLAFETQDKEKLLIRKDQLNTLFRAIASN 75 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM----KAAATQFPLPEGMNLP 152 + L S + + S +A+ + YY + + P Sbjct: 76 NVALWSHN-----VRRRTWDHLKSFFSNPFCDALDKKYYGSFSGYRMMSNELYLTVIYRP 130 Query: 153 LTLRHYRVF-ISYCSPSKKKSRAD---ILEMENLVKIIRASLQGASIT----TQTVDAQA 204 + + R+F ++ + + I +++ + I SL+ + + Sbjct: 131 VPAKISRLFNVAVHRSHAEILQEQQLAIRKLDEIGNQIETSLRRYGGDDGRGIEVLSTYE 190 Query: 205 ---------FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 ++ +++ + LD YL G Sbjct: 191 DKHGALCSQQLEFYNFLLSGEWQKVRVPSCPLDE--------------------YLGTGW 230 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMAD-NYSNLLNPELSISCPFILTLTLVVEDQVK 314 G T I + R + A+ +LN + +++T + + Sbjct: 231 VYAG-TETIEIRTANATRYARGIDFKDYANHTEPGILNGLMYSDYEYVITQSFSFMTKRD 289 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 + L+ S + E +LG G + Y ++ F + Sbjct: 290 GKEFLTRQKQRLQNTEDGS--------ASQIMEMDIAIDQLGRGDFVMGEYHYSLLVFAE 341 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 D ET +N + NGF F LP V Sbjct: 342 D-METVRHNTSHAMNILQDNGFLATVIATATDAAFYAQLPCNWRY--------RPRVAGL 392 Query: 435 ESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YN 481 S N A L NP A L T Q A+++ + + N N Sbjct: 393 TSLNFAGLSCFHNFRAGKRDGNPWGQALTLLKTPSGQPAYLNFHYSKGDEDNFDKKLLGN 452 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDS------GGFAVVFDMGDGYKSLCENMGGVYL---D 532 + G SGAGKT L+ + G V FD G K +GG YL + Sbjct: 453 TRIIGQSGAGKTVLMNFCLAQAQKYLHNAPMGMCNVFFDKDQGAKGTILAIGGKYLAIRN 512 Query: 533 GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENRA 591 GE FNPF + + + V+ S +G + E + A+R + Sbjct: 513 GEPTGFNPFQMEP-TAGNILFLEKLVQVLVSRDGQHVTTTDESRISHAIRTVMRMRPELR 571 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT------ANGTYGQYFNSDEPS 645 R+ V+ + SD + R + + L ++ GT+ + + Sbjct: 572 RLSTVLQNVTEGSDR---------QDRENSVAKRLAKWCFDDGTGKRGTFWWVLDCPQDQ 622 Query: 646 LRDDAKMV-VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF 704 + + + D + + L+ RM + + +DE W+ +D Sbjct: 623 IDFNTHSNYGFDGTDFLDNADVRTPISMYLLH----RMELAIDGRRFIYWMDEAWKWVD- 677 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 + EF T R+ G + TQ + S A A + +I L Sbjct: 678 -DEAFSEFANNKQLTIRKQNGLGVFATQMPSSLLN---SKVASALVQQVATEIYLPNPKA 733 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMY 822 ++ +Y + + D+I + FL++ +HS RL ++ A+ Sbjct: 734 DYHEYTDGFK--VTNEEFDIIRSMS----EESRMFLVKQGHHSMICRLELNGFDDELAIL 787 Query: 823 SSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGP 856 S + E + Q E G + ++ Sbjct: 788 SGSSDNNELLDQVIAEVGDDPSVWLPVFQERRKAR 822 >UniRef50_B7ABM5 Type IV secretory pathway VirB4 component, ATPase TraC n=3 Tax=Thermaceae RepID=B7ABM5_THEAQ Length = 847 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 150/875 (17%), Positives = 285/875 (32%), Gaps = 79/875 (9%) Query: 24 ESAKANEVLGEMSFPQFSRLLPYRDYNQESGLF-MNDTT--MGFMLEAIPINGAN----E 76 SA + G+ + LLPY + + GL +ND +G LE P + E Sbjct: 2 TSASRTSLFGKAREDSLTALLPY--WEIQDGLMVLNDGRVELGVGLEMSPTLFVHTAYME 59 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 V + +LR+ +P G + + S R+++ ++ S A + + Sbjct: 60 GFVGVVKSLLRSGVPEGTRARLIVEVSPAHPSRVQHYAAGWAPSHPTARFLHERRAEAWW 119 Query: 137 KAAATQFPLPEGMNLP--LTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS 194 + + + + L R + I + K++ + + E + + + I Sbjct: 120 SRWQREEIVEKRIYLTVLFGKRRGKRRIPFT---KEEWQEVVAEAKRIQERIVQIASAYR 176 Query: 195 ITTQTVDAQAFIDIVGEMINH----NPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 I + Q + +N + Y + Q P + L+ Sbjct: 177 IRAFPLGDQDIFALAYRYLNPALALSEVPEYRQTWQRYPREAIRRIESLRPPTLR---AQ 233 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 L G +N + ++L L+ F L + + E Sbjct: 234 LLKGEVDNSYRDALYVGGMWAGILSMYTVPDETYAEMGDVL--ALAGGSRFYLVMDFLHE 291 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 + S++ P+V E + V +++ Sbjct: 292 PHELALRALKARARRYYSASQSGT-YVDPNVRVGQVETEGAITHISQTGDHVFQVGVSLV 350 Query: 371 AFCKDNNETALEVEQDILNSFRKN-GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 + + E ++ K G R + +LT PF G K Sbjct: 351 LLDR-SREALEGRISQAMSHLSKVPGSPFRVLRNGLLTPWLTLAPFSGGVAEEKVY---- 405 Query: 430 VVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 N A+ P +P L + L ++D F + M NYN V G S Sbjct: 406 ----LLETNAAHFFPTTGAWRGSPRPVALFKNRQGALVYVDPFDKRMR--NYNGIVVGGS 459 Query: 489 GAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFAN- 543 G+GKT +Q L+ +L V+ D G Y++L E GG ++ NPF Sbjct: 460 GSGKTFALQYLLSELLKDDKVSVVILDRGKNYQALVEAFGGALIEIRPGAGTSVNPFDLE 519 Query: 544 ---ITDIDQSAERVRDQLSVMASPNGNLDEV--HEGLLLQAVRASW-------------- 584 + + + L M + + +L A+ ++ Sbjct: 520 EGQVEPTPEKKGDLLKVLRAMVPAGDDRTQEAIENAILEAAIEQTYKRATTVDIGPDGTE 579 Query: 585 LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + A + D+V L + SP+ + + + L +T + G + + Sbjct: 580 EKRYLGATLSDLVKTLLTLDEIGGRGVSPSEKEVARSLALRLQSWTGDSPMGSFVDRPTS 639 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN---LKKLNVIDEGWRL 701 + A++V EL GL+ L V + I R R L V+DE W++ Sbjct: 640 VPLESARVVCYELEGLDAYEGLDVVGTMLMAGLIWKRASEGKRRGEERNLLVVLDEAWKV 699 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 FKN +E+ YR R G +ITQ++ DF + A N+++ +L+ Sbjct: 700 --FKNPYAASLVEELYRRFRHLGGGIWSITQSLQDFTGESAGR----IVQNTTWVFLLRV 753 Query: 762 SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL----QVENHSSWHRLFVDPL 817 ++ +++ + G K +S ++ +L+ P Sbjct: 754 QGED-EYVQRVF--NLPDRAMAVFKSLGGVKG-LYSELMVWAVRDDLKEGDVLQLWPTPY 809 Query: 818 SRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAW 851 +++S + + + G + AV LA Sbjct: 810 DYWLFTSAQEEAAKRKALVEAYGGDVLRAVRDLAE 844 >UniRef50_C5SH59 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SH59_9CAUL Length = 807 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 110/728 (15%), Positives = 210/728 (28%), Gaps = 98/728 (13%) Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ------AFIDIVGEMINHNPD 218 PS ++ + M L + ASLQ ++ + + G ++N + Sbjct: 142 SLPSSEQRNDALSVMSALNDQVEASLQPYMPRRLSLKGSDRAPQSELLTLFGRLLNGVYE 201 Query: 219 SL---YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNP 275 + + P S L++ ++ + P Sbjct: 202 PIGLPHADISAWLPSSRLHFARYSSDVEIW-------------HPLEHRFAGMLDIQDFP 248 Query: 276 EIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYA 335 + LLNP L + ++ T + + ++ S + L ++ Sbjct: 249 RTSEP--------GLLNPLLYVDYDYVETQSFSILNRRDALSALLRQKGRLIATDDAAF- 299 Query: 336 KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG 395 +E + + L SG+ + Y ++ F + A + G Sbjct: 300 -------EEVGQMDQAMNDLQSGKLELGEYHYSLAVFGESPKRVARHLADARARLQDAAG 352 Query: 396 FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV-------AD 448 L + + LP L S N A+L + Sbjct: 353 LRLSPVDLVPECAWFSQLPGNWRLRPRSAL--------ITSRNFADLAGFHNFTEGKASG 404 Query: 449 NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRS 502 NP A + T + + + N +CG +G GKT L L+ Sbjct: 405 NPWGQALAVFDTPSGHPYYFNFHDSPPDQKAQGEPYPGNTFICGATGVGKTALQSFLLAQ 464 Query: 503 VLDS-GGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQL 558 G AV+FD G + GG Y + G FNPF + + L Sbjct: 465 STKYEGLRAVIFDKDRGAELFIRASGGRYFQLISGRPTGFNPFQLPP-TQTNLRFCQGLL 523 Query: 559 SVMASPN---GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTI 615 + S L E LL AV A + + +N Sbjct: 524 MTLVSGGDGAARLTSSEEALLAHAVSAVM-NAGVDTSLRSLSLVAQNLP----------- 571 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDRPSLLVAVMFSL 674 R+ D + L ++ G F++ ++ + + D P + VM L Sbjct: 572 RAGADSLHERLRKWLRGERLGWVFDNAADLHDPASVQLSGFDYTDILDDPEIRTPVMAYL 631 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 + E + + V++E W+ L + +F +T R+ G + +TQ+ Sbjct: 632 LHRTEEMI----DGRPFIYVMEEFWKPLR--DPYFADFALNKQKTIRKQGGLGVFVTQSP 685 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D + + S +I L + Y + P + ++ FG + Sbjct: 686 SDVLAH---PIGKTMVEQSVTQIFLPNPRADAEDYVDGFK--LTPTEFQILRSFGETSRK 740 Query: 795 WFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAW 851 L++ S + + + E++ R E G + Sbjct: 741 ----CLIRQGQTSRVVSYDLSGLGEILDILAGTTRSVEWLDAIRGEVGDDPAAWLPAFYE 796 Query: 852 KKSGPEMA 859 + Sbjct: 797 ALRTKKRQ 804 >UniRef50_A6UMV4 Type IV secretion/conjugal transfer ATPase, VirB4 family n=4 Tax=Rhizobiales RepID=A6UMV4_SINMW Length = 819 Score = 329 bits (842), Expect = 4e-88, Method: Composition-based stats. Identities = 120/842 (14%), Positives = 245/842 (29%), Gaps = 93/842 (11%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVE-ALDHMLRTKLPRGIPLCI 98 S +PY + ++ + + + ++ +++ + E E + +++ + R + Sbjct: 21 MSTHIPYLRHVSDTVIGLENGSLLSIIKLDGLFFQTEDQAELNMRSVVQNTMIRALGSSR 80 Query: 99 HLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 + + S ++ +E G E F + YM + + L + Sbjct: 81 YSLWSTVIRREVE-----TQIGGAFDEPFCDLLNKRYMGQLRHKRMFTNEIYLTVVRSGM 135 Query: 159 RVFISYCSPSKK------------KSRADILEMENLVKIIRASLQGASITTQTVDAQAFI 206 R + K+ ++R D+ E+E L+ I L + + Sbjct: 136 RGALGIGDSLKRLFDKANRDVRIQQTREDVTELEELIGNIVRDLHKYGARALGITYRRRN 195 Query: 207 DIVGEMINHNPDSLYPKRRQ--------LDPYSDLNYQCVEDSFDLKVRADYLTLGLRE- 257 D ++ + + L + V L R Sbjct: 196 DDEAKIEGREENEKGEPYSEPCEFFNAILSCGVPRKMRLPRMGIRNFVGTSRLHFSKRTM 255 Query: 258 ----NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 T + P +L+ L ++ FILT + + D+ Sbjct: 256 QAQAAVDEDTRFGALLSIKEYP--------PFTGPGMLDGLLQVNHEFILTQSFTIADKP 307 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 + + ++ ++ L + ++ + L++ Sbjct: 308 IAQERISRLQRQIRASDESG--------SSVEQDIDYALNSLMNQEAVFGFHHLSLLCLS 359 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 +D ++ + N F LP K + + Sbjct: 360 RD-LPGLSRTVSELGACLTDMNLTWLREDLNLEAGFWAQLPGNHSYIARKAMLSSANFSG 418 Query: 434 AESFNVANLMPLVADNP-LTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 S + N AD + T + + R + + V G +G+GK Sbjct: 419 LSSMH--NFATGQADRTHWGLPITILETTSQTPYWFNFHRRDI----GHFLVTGPTGSGK 472 Query: 493 TGLIQPLIRSVLD--SGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDI 547 T + L+ + AV FD G + +GG Y G FNP + + Sbjct: 473 TVALTFLLAQAMRVSPTPKAVFFDKDRGAEIFVRAIGGSYEVLSPGTPTGFNPLQ-LENT 531 Query: 548 DQSAERVRDQLSVMASPN--GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 + E + L M G+ + E L +A+ + ++ L Sbjct: 532 GPNREFLLRLLKAMLRSGDRGDFTQEDEDTLERAIVRLMQEPAAERNLANLAALL----- 586 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK-MVVLELGGLEDRP 664 R+ +++ L + G FN+ L + + ++ + Sbjct: 587 ------VGRSRADANDLHSRLRPWIE-GEKAWLFNAQHDVLSFSGRSVFGFDMTNILGNE 639 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 L + L +R+ + +DEGW+LL + FI +T R+ Sbjct: 640 DLRTPALMYL----YHRLDELLDGNPVMFFMDEGWQLLM--DETFSAFIVDKMKTIRKLN 693 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 G TQ+ D KAS S+ I + Y + + + + Sbjct: 694 GIVGFGTQSAADIAKAKASH---TLIEQSATNIHFPNPRADEESYIKRF--GLTVKEFNF 748 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQKRKEGLSI 842 I K FL++ N S RL + P + S E R++ Sbjct: 749 IKNTPPEKRT----FLIKHGNDSVIARLDLSAMPDLVKVLSGRKETVEECAALREQYGDE 804 Query: 843 HE 844 E Sbjct: 805 PE 806 >UniRef50_A1VQ79 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ79_POLNA Length = 814 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 111/867 (12%), Positives = 253/867 (29%), Gaps = 114/867 (13%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 LLP+ + + GF ++ A + + A+ + L C Sbjct: 13 LPDLLPWAALIDNGVVLTKSGGLLAGFEFRGPDLDSATKEELAAVSARINAALALDDGWC 72 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE--GMNLPLTL 155 +H+ + + + + + + + L + Sbjct: 73 LHVDAVRRQSPGYPLDGAFPDRTTRLLDDCRRLAHEGDWAGFQSDYTLVLCWHPDRDAAA 132 Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA----------QAF 205 + +F+ + R+ + + ++ I + L G + + + Sbjct: 133 KAEMLFVDGAQKTGVAERS-LTRFKTVLAEIESRLAGT-LKIRRLVDTVDTETGSVESQL 190 Query: 206 IDIVGEMINHNPDSLYP-KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 + + + P + + + + L F+ ++ Sbjct: 191 LAHLASCVALAPRASFVMGTVPMYLDAVLGQHDFVTGFEPRIDDKT-------------- 236 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 + + P ++ +L+ + + + + + Sbjct: 237 -AICIAVTGFP--------GASFPGILDFLSRLPVEYRWSNRFIFMPVREADKALGNYRS 287 Query: 325 DLEKKSKTSYAKWFPS----------VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 +K + S + S ++ ++ Sbjct: 288 KWAQKRLSLMNLMRSSQGGGVTHVNADADDMAADAVAAMAEASSGLVRFGFYTSVILLSS 347 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 N + + Q + GF N + +L +P + + L Sbjct: 348 ANLQQLRDAAQYVTKMIANAGFSARVESVNAVEAYLGSMPGNLYANVRRPLVN------- 400 Query: 435 ESFNVANLMPLVADNPL------------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 + N+A+L+PL A + L A T + + + + Sbjct: 401 -TLNLAHLLPLTAIWAGPDAHPCPFYPEHSAPLLQAKTDGATPYRLCLHAGDL----GHT 455 Query: 483 AVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLD----GETLR 537 A+ G +G+GK+ L+ L+ G A VFD G L GG + D + + Sbjct: 456 AIIGPTGSGKSTLLATLVAQHFRYPGAQAFVFDKGYSMFPLVAAAGGQHYDIAGESDNIT 515 Query: 538 FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE--NRARIDD 595 F P I + + S+ + L +AV + + + + + Sbjct: 516 FCPLGQIDNELERTWAAEWLESLAELQGVAMSPELRKELFRAVNQLAASTDCAEQRTLSN 575 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 + L++ + + L+ Y+ G+ G+ +++ L+ D V Sbjct: 576 FLLTLQD-----------------NRLREALEYYSLRGSAGRLLDAESDGLQADI-FQVF 617 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEK 715 EL L R ++ ++ Y+ +R+ + L V+DE W +L I + Sbjct: 618 ELEHLMARGEK---IVLPVLAYLFHRLEQRFHGQPTLLVLDEAWIMLGH--PAFRAKIRE 672 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 + R+ A I TQ++ D S A + + KI+L + LY Sbjct: 673 WLKVLRKSNVAVIFATQSLSDL---SGSGIADVIFESCPSKILLPNPQAQTEALCGLYQA 729 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV-DPLSRAMYSSDGPDFEFVQQ 834 L ++ I K Q++ + S L + P + +S D ++ Sbjct: 730 IGLNRRQIQIVSNAIPKRQYYH----LHPDGSRVFELGLTPPEMAFVGASGREDLARIRH 785 Query: 835 KRKEGLSIHEAVWQLAWKKSGPEMASL 861 + L ++ + A L Sbjct: 786 L--QKLDALTWPSAWLRERGQFDAARL 810 >UniRef50_D0UIP4 ATPase n=5 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=D0UIP4_AGGAD Length = 927 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 120/864 (13%), Positives = 274/864 (31%), Gaps = 116/864 (13%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING--ANESIVEALDHMLRTKLPRGIPLC 97 +++PY E + D E I+ N+ ++ + L T + Sbjct: 125 LKKIIPYSSLISEDVVLSKDGIYSATWEIEGISYETRNDEDIDRYKNSLNTLIRSLATEN 184 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 I + + + + F Y+++ + + + Sbjct: 185 ISIYTHN------ARLFSTLKSNHTFKDGFAKDVNDTYVQSFKDIDFMENSLFFTICYNP 238 Query: 158 YRVFISYCSPSK------KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + ++ + ++ + + +L + D++ Sbjct: 239 KKGLDKINKKAQSKDERLEDIELNLQHFNEIANRVGNALDKFGAN--RLTTYEKYDVMYS 296 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + + P LNY ++ + T + NG+ S + + Sbjct: 297 QQLEFYN--FILTGNYQPVRVLNYPIYSYLGNVDMIMAKDTAEINVNGKLS--YVRGIEI 352 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 + D ++ L+ + ++C +ILT + + + + + + + L Sbjct: 353 KD--------WVQDTHAGFLDSLIGLNCRYILTQSFSIVPKTEALTLIDRQLKQLRSTED 404 Query: 332 TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 + + L SG + + + D+ + ++ + + Sbjct: 405 DGI--------SQQDALLLAKDELVSGNVCFGDHHFTLMLYA-DSLKEVQKISTEAFDKL 455 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV----- 446 GF + +L+ LP K V S N L L Sbjct: 456 SDLGFIVSLSNIALDEAYLSQLPCNF--------KFRPRVSMISSKNFVGLNSLHNNPVG 507 Query: 447 --ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQP 498 +N A L T N + + + + + A+ G SG GKT L Sbjct: 508 KATNNCWGNAITLLKTNTNTPFYFNFHQTRLGRNDFGDMHLGHTAILGKSGTGKTVLATF 567 Query: 499 LIRSVLDSGGF-------------AVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFA 542 L+ A+ D G + MGG Y +G+ FNPF Sbjct: 568 LLSQCTAFSNPDTFPKNSLNKKFTAIYLDKDYGAEIAVRAMGGKYNRLKNGQPTGFNPFM 627 Query: 543 NITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENRA--RIDDVVDF 599 + + + + + ++++A+ +G+ L + + AVRA + I +++ Sbjct: 628 LEKN-EPNITFLNNFIALLATSDGSTLSTKDKEDINFAVRAVMDLDKEYRAEGISRLLEN 686 Query: 600 LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELG 658 ++ ++E + + L + G YG F+++ SL + + + Sbjct: 687 IQKDVENE------------NSLERRLRIWKKGGIYGWVFDNETDSLSFNEYDIYGFDGT 734 Query: 659 GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR 718 + D P+++ + F L+ ++ + + + +DE W+ L ++ EF G + Sbjct: 735 EVLDNPAVINPLAFYLLFRVQQIL----DGRRVVVFLDEFWKWL--QSDSFSEFAYDGLK 788 Query: 719 TARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFL 778 T R+ G + ITQ+ + S ARA I L S ++ +Y + Sbjct: 789 TMRKKNGFIVPITQSPDEIIK---SKIARAIIEQVETFIFLPNSKADYHEYTHEFK--VS 843 Query: 779 PLQRDMIGKFGAAKDQWFSSFLLQVE------NHSSWHRLF---VDPLSRAMYSSDGPDF 829 + +I + FL++ ++ +L +D S + S + Sbjct: 844 EKEYSIIKNL----EDDSRMFLVKKGSENDSRGNTVVAKLDLSALDRGSMKVLSGSADNV 899 Query: 830 EFVQQKRKE-GLSIHEAVWQLAWK 852 + + E G + + + + Sbjct: 900 AILDKIVSEVGENPQDWLPIFKAE 923 >UniRef50_A1B6Y4 AAA ATPase n=92 Tax=Bacteria RepID=A1B6Y4_PARDP Length = 877 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 113/853 (13%), Positives = 243/853 (28%), Gaps = 135/853 (15%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLRTKLPR-GIP 95 + + LP+ + D + ++ A + + A+ L R G Sbjct: 13 RLADFLPWAALVTPGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVAGRLNNAFRRLGSG 72 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 I + + + + +A+ A Sbjct: 73 WAIFVEA--------QRSEAATYPDSTFPDAASALVDAERKADFEQAGSHFVS------- 117 Query: 156 RHYRVFISYCSPSKKKSRAD-----------------ILEMENLVKIIRASLQGASITTQ 198 Y + + + P+++ +RA+ + + + A L G Sbjct: 118 -DYFLTLLWLPPAEEAARAESWLYEGRETSGVNPWELLRGFTDRGDRVLALLDGFMPECA 176 Query: 199 TVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN 258 +D + + I+ N + + + L Q + + ++ +L Sbjct: 177 WLDDGETLTYLHSTISTNRQRVRVPEVPMHLDALLADQPLTGGLEPRLGDAHL------- 229 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 + P +L+ I+ P+ + ++ D+ Sbjct: 230 --------RVLTITGFPTATTP--------GILDELNRIAFPYRWSTRAILIDKPDATRL 273 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEW------------GELRQRLGSGQSSVVSYF 366 K K+ A + E Q LG+ + + Sbjct: 274 LTRIRRQWFAKRKSIAAILKEVMTSEPSALVDTDAANKAADADLALQELGADVAGMAYVT 333 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 +T + D A E + + + F + N + +L LP A + + Sbjct: 334 ATVTVWDAD-PRLADEKLRLVEKIVQGRDFTAMIETVNAVDAWLGSLPGHAYANVRQP-- 390 Query: 427 EAGVVQRAESFNVANLMPLVADNPLT--------PAGLLAPTYRNQLAFIDIFFRGMNNT 478 + N+A+++PL A P T + + Sbjct: 391 ------PVSTLNLAHMIPLSAVWAGEAKDAHFDAPPLFYGKTEGATPFRFSLHVGDV--- 441 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGETL- 536 + V G +GAGK+ L+ + FD G ++ MGG + D Sbjct: 442 -GHTLVVGPTGAGKSVLLALMALQFRRYSRAQVFAFDFGGSIRAAALAMGGDWHDLGGGL 500 Query: 537 --------RFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 P A I + + +++ + + L A+ + A Sbjct: 501 SDGDEASVALQPLARIHETAERGWAADWIAAILRREGIAVTPEVKDHLWTALTSLASAPV 560 Query: 589 NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD 648 + L++ + L Y G G+ +++ L Sbjct: 561 GERSVTGFAVLLQSNG-----------------LKQALRPYCIGGPSGRLLDAEAEHL-G 602 Query: 649 DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 A + E+ GL +++ Y+ +R+ L +IDEGW LD + Sbjct: 603 SAPVQAFEIEGLVGTG-----AAPAVLSYLFHRIGDRLDGRPTLLIIDEGWLALD--DEG 655 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 + + +T R+ + + TQ++ D D S+ A A + +++L + Sbjct: 656 FSGQLREWLKTLRKKNASVVFATQSLSDID---HSAIASAIIESCPTRLLLPNERAIEPQ 712 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM-YSSDGP 827 +Y L ++ I K ++ Q + L + + A+ +S Sbjct: 713 ITAIYRRFGLNDRQIEILARATPKRDYY----CQSRRGNRLFELGLSEIGLALCAASAKS 768 Query: 828 DFEFVQQKRKEGL 840 D + E Sbjct: 769 DQARIAAIESEHG 781 >UniRef50_Q2IEL2 Type IV secretory pathway VirB4 components-like n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IEL2_ANADE Length = 861 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 150/842 (17%), Positives = 285/842 (33%), Gaps = 92/842 (10%) Query: 70 PINGANESIVEALDHMLRT---KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAER 126 + A E + + LR+ L L + + E +RE+ G A Sbjct: 42 DVRFAGEDQIAGIGEALRSLVASLDDETTLHFI----HRIEEGAEEDVREY--EGIAAAT 95 Query: 127 FNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKS-------------- 172 A R Y A LR RV++ + P K Sbjct: 96 DAAALREYVASRARWL--------RTQRLRRARVYVFFSGPGGLKQGIGRGLLGGKLLFG 147 Query: 173 ----------RADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL-Y 221 + + L + A L A I ++ +D + + E++N Sbjct: 148 KATQLTGAEHARRLGRLAQLRDRVAARLGAAGIPSRELDLEDVWRLHYELLNPTRARAGA 207 Query: 222 PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARIL-------NFHLARN 274 R + + Q V+ E+ + + L Sbjct: 208 APPRVRLRDTLWSDQVVKREGLHLAEYTEAEQLAHEDVEDGRGHLRQGGIWRRVATLKVL 267 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS---- 330 PE + + L + L +T+ V Q N ++ +E Sbjct: 268 PEGGTDYFACEPLLGLATA--RGPLSYTLAVTVHVRTQKTARWLLNNQHALVESLRAVMP 325 Query: 331 --KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + + + + + L + L + + VV+ +++ + + + Sbjct: 326 FLDRRTVESEEADQAKQEAIRGLFEELAAMSTKVVALSVSLLLEAG-SLDELEAATEASR 384 Query: 389 NSFRKNG-FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 ++F G EL+ + L+ LP L K+ S N A+ +P+ A Sbjct: 385 SAFAAAGNSELLVEEVTQVPALLSMLPGACRYQLRKKGC--------TSRNAADFLPVFA 436 Query: 448 DNPLT-PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 + A + T + D+F + ++ V +G+GK+ + L + Sbjct: 437 PWRGSARASSVLLTPTGEAFRFDLFDKSSGVNAHHGIVVADTGSGKSVTLGALTLDARAA 496 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGE-TLRFNPF--------ANITDIDQSAERVRDQ 557 G A++ D G +K L E +GGV++ + + +PF ++ E V Sbjct: 497 GVEAILIDNGKSWKPLTELLGGVHIPVDLSTSISPFLSYSQLAGEGTEISNEDIEHVVQF 556 Query: 558 LSVMASP--NGNLDEVHEGLLLQAVRASWLAK-ENRARIDDVVDFLKNASDSEQYAESPT 614 L V + D+V ++ +A+R ++ + R +V + ++ P Sbjct: 557 LEVCVADRTRPPFDKVERDVVARAIRWTYETRFRQRPEEPPLVGQFSEGLATHEWTH-PD 615 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 R+ D+++ L + G Y + N LR DA ++ +L + + M ++ Sbjct: 616 DRAIADDLVRRLAIFCT-GIYADFLNRPS-QLRFDAPLLTFDLAKVSENAGTKSVAMATI 673 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 I I NR R + L +DEG L + F+ YR R++ A I+QN+ Sbjct: 674 IQAITNRAMA--RRTRTLVEVDEGHEYLGADD-ATERFLGGCYRKMRKYDTAMWMISQNL 730 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 DF + A GNS+ +I L+ A + + + P K Sbjct: 731 NDFLGSRVGR--EAIVGNSTIRIFLRHLAGKHRAVVEHF--GLSPRAAAAFAGLE-LKPG 785 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE-AVWQLAWKK 853 WFS FLL ++ RL + PL+ + ++D D +F+ + S A+ Q + Sbjct: 786 WFSDFLLMYGARTAVVRLALHPLAYWILTTDKEDQDFLARAVARNPSYDRLALLQELAAR 845 Query: 854 SG 855 Sbjct: 846 YP 847 >UniRef50_B9KGH4 Secretion/conjugal transfer ATPase VirB3/4 n=11 Tax=Campylobacterales RepID=B9KGH4_CAMLR Length = 924 Score = 324 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 131/872 (15%), Positives = 280/872 (32%), Gaps = 118/872 (13%) Query: 31 VLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALD 83 + + P +L+PY +S + + + G E ++E+++ Sbjct: 110 IFPLHAEPSLEKLIPYSSLLTDSIVITKEHMLISTFFIEGIEFECE----SDENLI---- 161 Query: 84 HMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQF 143 + L + + + + L EF S + I Y+ K+ + Sbjct: 162 --FKKNLLNMMIMSFSNEPIAFYFHNVRFKLHEFLDSHFENSFLKEIDEKYH-KSFDKKS 218 Query: 144 PLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ 203 + L L + + I + +K ++ E+ N V + L + + Sbjct: 219 FQQNSLYLTLVYKPLKSNIDLKTFNKLNYKSKAKEISNFVLKFQEYLGKLEANIKDFKPK 278 Query: 204 AFIDIVGEMINHNPDSLY-------PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR 256 I ++ + + + + +++ D + L Sbjct: 279 ILSVYKKNNIKYSEQLEFYNYLIGGKFNPVVVCDTPIYQYLTGTLKNIQFNHDMIQLNYN 338 Query: 257 ENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTH 316 + ++ + + +S +L+ + + + +T T V + + Sbjct: 339 D---DTKRFARIIEIKDY--------SNETFSGILDSLMYLDVDYTITQTFVPLSKYDSK 387 Query: 317 SEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 S N + L + ++ L S S +Y NI F D+ Sbjct: 388 SALNKQINQLISSEDDGV--------SQIEQLNLALDNLISNVISFGNYHFNICVF-GDS 438 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAES 436 + + ++ S GF ++ + P V S Sbjct: 439 IDECKKNTNKVITSLNSLGFTSTLANIALPASYFSQFPSNFAI--------RPRVHMISS 490 Query: 437 FNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN-------YNM 482 N ++L+ L N A + T Q F++ N + N Sbjct: 491 LNFSSLVALHNFLMGKKEKNCWGDAVTILKTPNKQPYFLNFHKSDGKNKDEFGDLNLANT 550 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDSGGF---------------AVVFDMGDGYKSLCENMG 527 + G SG GKT + +I ++ AV D G G Sbjct: 551 LILGQSGGGKTVFMNFIINQMIKYANKDSFPANIPEDKKKFTAVFLDKDKGALGNILCAG 610 Query: 528 GVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRAS 583 G Y+ +G+ FNPF T+ +++ ++ + + + NG L+ E + +AV Sbjct: 611 GRYISIKNGKPTGFNPFMVETN-EENLRFLKQLIKLCVTRNGEILNTKEEKQINEAVNTL 669 Query: 584 WLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE 643 E R + L+N +D + + + L + +G F+++ Sbjct: 670 MFQFEISERKYPISLLLENITDD---------FNDNNSLKSRLSLFQKGKQFGWVFDNEY 720 Query: 644 PSLRDDAKMVVLELGG--LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRL 701 +L + + + G D + + + ++ + N + IDE W+ Sbjct: 721 DNLDFPDDINLFGIDGTEFLDEKDVSALISYFILWRVMNLA----DGRRLCIDIDEAWKW 776 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 L +N V E ++ ++T R+ G TQ+I DF K A S+ KI L Sbjct: 777 L--ENDIVAEEVKNKFKTIRKQNGFLRLATQSIEDFLKLK---IANTLVEQSATKIFLPN 831 Query: 762 SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD---PLS 818 AK ++ + ++ F K FL++ ++ + L + + Sbjct: 832 P---LAKEDEYLRLGLSKDEFLIVKNFAPHK----RQFLVKRQDEAVVCSLDLSSLGKEN 884 Query: 819 RAMYSSDGPDFEFVQQKR-KEGLSIHEAVWQL 849 + S+ E ++ +E ++ E + +L Sbjct: 885 LKILSTGTSYIEKIENIFNQENKTLEEKINEL 916 >UniRef50_Q9F245 ATPase n=3 Tax=Aggregatibacter actinomycetemcomitans RepID=Q9F245_AGGAC Length = 923 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 110/864 (12%), Positives = 247/864 (28%), Gaps = 115/864 (13%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANES------IVEALDHMLRTKLP 91 +S+ +PY + + + + + + E L+ ++++ Sbjct: 124 KDYSKFIPYSSHIAPNVVITRNGDLVATWCCKGVTFETAENYELNLSKEKLNTLIQSFSK 183 Query: 92 RGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNL 151 +G+ + ++ L G + F Y + + Sbjct: 184 KGVS-----FYQHNIRHKVNETL-----DGHFSSEFTQEVNDKYYAGFNNGTLQRNILYI 233 Query: 152 PLTLRHYRVFISYCSPSKKKSRA------DILEMENLVKIIRASLQGASITTQT------ 199 L Y + K + M+ + + +L+ T Sbjct: 234 TLVYTPYSKLEKISRKTTKLKDKKQELAYQLETMQEMCSRLDKALEDFRGEALTTFSKGG 293 Query: 200 VDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENG 259 + +I + + + +T Sbjct: 294 ALYSEQLSFYNYLITNRWQPVRVTSTSFY------HLLGNTDLHFGKETGQITFNGES-- 345 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 + + + + I+ +++T + + Sbjct: 346 ----RFFRCLEIKDY--------TEETCEGFFDALMYINADYVITQSFQAMPSNVAKEKL 393 Query: 320 NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 + + L ++ + + L SG+ S Y + + D+ + Sbjct: 394 DRQQKRLNSSNEAAI--------SQVDNLTVALDDLASGRLSFGYYHFGMMVY-GDSIKD 444 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF-N 438 + +I+ G + ++ P + + S N Sbjct: 445 VTDKTNEIIAVLSSLGLIITLANTALSASYFGQFPANFAYRPRLAMLSSRNYASLTSLHN 504 Query: 439 VANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY------NMAVCGTSGAGK 492 A+ NP A L T Q + + + N AV G +G+GK Sbjct: 505 FASGK--CNGNPWGDAVTLVKTPNAQPYYFNFHQSAPGVDDRGEKRLGNTAVFGQAGSGK 562 Query: 493 TGLIQPLIRSVLDSGG-------------FAVVFDMGDGYKSLCENMGGVYL---DGETL 536 T L+ L+ + V D G ++ MGG Y+ G Sbjct: 563 TMLMTFLMTQLDKFRHTSTFLPTSVKRELTMVYLDKDYGAEACIRAMGGKYMLIRKGVPT 622 Query: 537 RFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENRAR--I 593 FNPF + ++ + + ++ + NG L + E L +AV++ I Sbjct: 623 GFNPF-MCENTPENLSFLSTLMKMLVTRNGRTLSSLDEEELFKAVKSVMEFDMEYRSYPI 681 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK-M 652 VV+ L E T + + + L + G +G F++ +L + Sbjct: 682 SRVVEHLP---------EGSTKAEKENSLARRLKNWAQGGEFGWVFDNPADTLDFTGHAV 732 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 ++ D + F L+ I + + + +DE W+ L K+ +F Sbjct: 733 FGIDGTEFLDDQDTCSPLSFYLLHRI----GKLLDGRRLIIFMDEFWKWL--KDEAFSDF 786 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + R+ G I +TQ++ + S +RA I L Y Sbjct: 787 AYNKLKVIRKEDGIVIPMTQSMDEVLK---SPISRAVVEECETTICLPNPIARKVDYVDG 843 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD---PLSRAMYSSDGPDF 829 + Q ++I + FL++ ++ +L + + + S+ + Sbjct: 844 F--GISEKQFEIIRELQPDSRT----FLVRKGLETALAKLDLSGLGRENLKILSTSKDNA 897 Query: 830 EFVQQKRKE-GLSIHEAVWQLAWK 852 E + Q +E G + ++ + + Sbjct: 898 EILHQIIEEVGEAANDWIPIYKQR 921 >UniRef50_Q1GN15 VirB4 protein n=18 Tax=Alphaproteobacteria RepID=Q1GN15_SILST Length = 791 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 120/803 (14%), Positives = 253/803 (31%), Gaps = 96/803 (11%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGA-----NESIVEALDHMLRTK---L 90 + + +LPY + + T + + + I +G +++ ++ + + L Sbjct: 26 RLAHMLPYVSLVDDQTV---RTRVNELFQCIRFDGVNSYTTDDTYLDKVTALFARIIAQL 82 Query: 91 PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMN 150 +H + S+ + ++ +R+ S++GE + ++ + Sbjct: 83 GPEFSYYVHKV-SKAIKPDLDP-IRKDSFAGEVDRLWRKKLETSGLRDKTLTLTIIHRPP 140 Query: 151 LPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 L S + KK + + + V + + L + + + I +G Sbjct: 141 PKSVLPFLNR--SAPNRLKKATEKRLRRLGEAVNVFLSGLSELNPRILSAETGELIGFLG 198 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 + LYP + Y L++ + + + D+ L G +F Sbjct: 199 ALNTGQELPLYPA----NTYGFLSFN--AANTRVTFQGDHFELS---EGVVGHRYGKSFT 249 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 + ++ S + L++ I+T + + + ++ Sbjct: 250 IGEY---------SEGTSCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQMQASQ 300 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 + + + L + + S + + +T FC D + + +I+N+ Sbjct: 301 DAALSL--------MEALDIAADDLEAKRQSFGEHHMVVTIFC-DTLDELQTLSAEIVNA 351 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 G ++I R ++L+ P K + + N A+ Sbjct: 352 AAAEGVKMIGERVAAKAHYLSQHPGNQPKRVR--------ASAITNRNFADFAAFHRTQL 403 Query: 451 LTPAG--------LLAPTYRNQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTGLIQPL 499 PAG PT +G T+ + + G G+GK+ L L Sbjct: 404 GKPAGKTPWGKVITYLPTPEQSAYRFSYHEQGSPEKEPTSGHTLIMGRPGSGKSVLSAFL 463 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRD 556 + +G VFD G + GG Y G+ NP TD +A Sbjct: 464 MTQARRAGARIFVFDYRLGMEMAVRANGGRYASLKAGQPTGLNPLWTETDARGTAWLSDW 523 Query: 557 QLSVMASPNGNLDEVHEGLLLQAVRA-SWLAKENRARIDDVVDFLKNASDSEQYAESPTI 615 +++ + L + + VR + D + D Sbjct: 524 LATLLYRADKPLTPAQTNRIQEVVRQNAQATNPALRNWRDFASLFVSTDDG--------- 574 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSD-EPSLRDDAKMVVLELGGLEDR--PSLLVAVMF 672 ++ L ++T G YG F E + + +V +L G+ D +AV+ Sbjct: 575 ----GDLHQRLLEWTEEGRYGWIFGQTLEDTFSLEGDVVGFDLTGILDSEAEKERMAVLS 630 Query: 673 SLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 L +E + + VIDE W+ LD N E + TAR+ + +TQ Sbjct: 631 YLFRRVEREI---EDRRPTIIVIDEAWKALD--NAYFAERLSNWLVTARKQNTVAVMMTQ 685 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 + + + +I+L A Y L + D++ G+ Sbjct: 686 YASQL---ERTRTGKTIVEAVPTQILLPNIRAHAADYAML---NLYEKELDVLLNTGSD- 738 Query: 793 DQWFSSFLLQVENHSSWHRLFVD 815 L++ + S + Sbjct: 739 ---SRLALIRDDQGSIVVDADLS 758 >UniRef50_UPI0001BC40AC conjugal transfer ATPase TrbE n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC40AC Length = 867 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 130/902 (14%), Positives = 277/902 (30%), Gaps = 122/902 (13%) Query: 37 FPQFSRLL-PYRDYNQESG-------------------LFMNDTTMG--FMLEAIPINGA 74 P L PY ++ +++ D + F ++ Sbjct: 17 EPDLVAYLMPYVSIDENKNYEVRTTDSLGEERVENFPIVYLKDGSYQTTFQFRGKDLDSC 76 Query: 75 N----ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREF-----SWSGEQAE 125 SI +++ L+ +L + +H + ++ + G++ E+ Sbjct: 77 TVYELLSITSRMNNTLK-QLNADWTIHVHAIRKKIKKYNKKEGIQNIPIKIIELEREEFF 135 Query: 126 RFNAITRAYYMKAAATQFPLPE---GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENL 182 + + Y P + +L V I++ K ++ ++ L Sbjct: 136 KSGHHYESDYYITFTWLTPTDQLQKAKSLFFKKTDQEVIINFVEEHLKYYNQELTKIYAL 195 Query: 183 VKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPD-SLYPKRRQLDPYSDLNYQCVEDS 241 + I + + + +++ NP+ L R + + + Sbjct: 196 LSDILQ-------ECRILSIDEVVSFYHSLVSDNPELQLKAPRAFYYKGELIATGNLIEK 248 Query: 242 FDLKVRADYLTLGLRENGRNSTAR----------------ILNFHLARNPEIAFLWNMAD 285 + ++ + + L +S I L + P D Sbjct: 249 YKETLQQEEIRTELLPVLLDSYLYDSGITGGIEPKIGKYHIRTVSLLKYP--------GD 300 Query: 286 NYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSV---- 341 +L+ ++ + ++ D + E + + ++ S+ Sbjct: 301 AIVGILDELNRVNIEYDWCSRYIMMDTLTAKKELEKYFDRWDSARESFKTLLKTSLFKME 360 Query: 342 -------EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 A + + + L ++V Y + +N + + Sbjct: 361 GKENDAAASRAWQIRKEKANLEQDYNTVGYYTFTVVLK-GENKAEVEKRALLVKTILNAK 419 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 GF FN + +L+ +P + K L+ + V N + TP Sbjct: 420 GFTAKIENFNALEAYLSTMPGNL-LNVRKPLQNSLVFGNLLPLNAVWAGDAWNKHLNTPP 478 Query: 455 GLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVF 513 L T N +++ F + + + G +GAGK+ L+ L L + F Sbjct: 479 LLYCQTIGNTPFRLNLHFGDV----GHTIIIGPTGAGKSVLLATLHAQFLAYPKAKVIAF 534 Query: 514 DMGDGYKSLCENMGGVYLD--GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEV 571 D G + L + GGV+ D + +RF P + L ++ + Sbjct: 535 DRGASTRVLNKAAGGVFYDLGEDNIRFQPLRYCDQEKEREWCQEWILGLLEENTLTITPD 594 Query: 572 HEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 + + +A+ + ++ VD + + ++ L Y Sbjct: 595 IQTYVWKALTNLAKLPIEKRTMNSFVDLV---------------GGQSRDIKNALQSYYG 639 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK 691 G + +YF+ +E ++ V E+ + + +++ +M L I+ +M Sbjct: 640 KGPFAKYFDGNE-EFLQESLYTVFEMEKVMEHKNVITPLMEYLFHLIDTKMI--DGISPM 696 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG 751 L +DEGW L KN + IE RT R+ + + TQN + S A Sbjct: 697 LLTLDEGWAFL--KNKRFSGKIEDWERTLRKKNVSIVFTTQNPDEVLE---SDIKAAILN 751 Query: 752 NSSYKIILKQSAKEFAKYNQLYP-DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH 810 +I L + Y + D++ K +F + S Sbjct: 752 QCYTRIFLPNPNAKAEIQAGYYKIFGLNDTEIDILQNSTPKKQYYF-----KNPKGSRLF 806 Query: 811 RLFVDPLSR-AMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK---SGPEMASLEAWLE 866 L + PL + +S G D E ++ LS E Q + + LE ++ Sbjct: 807 ELALSPLELCYLANSSGKDQEKCKEL--SNLSQKEFNKQWLNYRGFYGDDIVDRLEEIIK 864 Query: 867 EH 868 E Sbjct: 865 EE 866 >UniRef50_A3W6D5 Type IV secretion system protein B4, putative n=2 Tax=Roseovarius sp. 217 RepID=A3W6D5_9RHOB Length = 794 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 115/800 (14%), Positives = 257/800 (32%), Gaps = 88/800 (11%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEALDHMLR---TK 89 + + R LPY +++ + + L I ++++ + + ++ Sbjct: 28 LKAERLGRHLPYIAAVRDNVILTRQGDLMASVTLGGIDSFTSDDAWIGEISEGFARIVSQ 87 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGM 149 L I+ +S D F+ + + A + + R + + Sbjct: 88 LGERFGFHINKVSRPDAADLAAPDGMPFASAVDAAWQRSLRARELKARTLMLTVLMR--P 145 Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV 209 ++P + +K I+ +E + ++ A A TV + ++ ++ Sbjct: 146 SMPQAFSKVLGALGGGRDFQKDIDTRIVALEEAMTLLMAMYSDAGAARLTVSSGDWLAVL 205 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 + + + QL + N+ +++ + +S F Sbjct: 206 AAVHGQSYGKIIAAPGQLLADTMSNFDVSFQGKTMRLES-----------GDSARYGAIF 254 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 + P + + L + +T + + + ++ Sbjct: 255 GIKSYPSRTWPTML---------DALELPYDITITNSFT---PRRANEMVERIQRTFRQR 302 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 + A + ++ E + SG+S+ ++ ++ FC D+ E + +I Sbjct: 303 GASEDAGVSLT-----EQLIEAADAVASGRSTFGTHHASVQVFC-DSAEELEQAASEIWR 356 Query: 390 SFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD- 448 + ++ G L+ + + P + + S N A L Sbjct: 357 AGQETGAVLVRESWAAKALYFAQAPGNWAYRIRDGI--------VSSHNFAELAAFHKTR 408 Query: 449 -------NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY---NMAVCGTSGAGKTGLIQP 498 +P PT + L + G + V G +G+GKT Sbjct: 409 PGRGPEASPWGKTITAFPTVTSSLYRFNFHEAGRRTDEPSVGHTLVLGRTGSGKTLGTAF 468 Query: 499 LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVR 555 L+ G +VFD G + +GG Y + G+ FNP TD + A + Sbjct: 469 LMAQARRVGARVIVFDKDQGLEMAIRALGGSYSEIKVGQPTGFNPMTTETD-ARGAAWLT 527 Query: 556 DQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTI 615 D L + + + + V L +AVR A+ D + + + D Sbjct: 528 DWLGDILARHRPFETVQTAALNEAVRQIAAAEPGLRTFDGLASLVASTDDD--------- 578 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEP-SLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 +++ + ++T G YG F+ S+ ++ L++ L D+ + A++ L Sbjct: 579 ----GDLVSRVREWTEVGRYGWLFSRPSAQSIAIGEDVLGLDMTELLDQDAERSALLAYL 634 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 IE + + VIDE W++L + + + T R+ + +TQ Sbjct: 635 FRRIERVI---EDRRPTIIVIDEAWKML--ADDIFVKRLHDWLVTMRKRNCVVMMLTQTP 689 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D SS + + + +I+ Y+ L + + D + Sbjct: 690 GHLDQ---SSVGQIIAESVATQILFPNPRANPEDYSIL---RLNAREADFLSS----PTA 739 Query: 795 WFSSFLLQVENHSSWHRLFV 814 L++ S + + Sbjct: 740 GLRLALIRSGADSVFVNTDL 759 >UniRef50_A8PL22 CagE, TrbE, VirB component of type IV transporter system n=1 Tax=Rickettsiella grylli RepID=A8PL22_9COXI Length = 809 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 108/870 (12%), Positives = 250/870 (28%), Gaps = 112/870 (12%) Query: 29 NEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTT--MGFMLEAIPINGANESIVEALDHML 86 N+ S FS LL Y + + + D M + + A+ ++AL ++ Sbjct: 3 NKKRHPHSM-GFSDLLNYAHFVDDGVIINKDGAFLMAYRFRGPDLYSASRGQLDALTVVV 61 Query: 87 RT---KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAAT-- 141 L G L + + + + + AE + R Y K Sbjct: 62 NRMAGILEDGWMLHVDEVRIPSLN-----YSAAAVFPSKVAELIDEERRRTYEKLGNHYE 116 Query: 142 --QFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRA--SLQGASITT 197 QF ++ R + +K + +K + L A + Sbjct: 117 NLQFLSFVWKFPLSVVKKTRHWF-IEGLGNEKDHDLTYLLHCFLKNVDRCVGLLRAQFSL 175 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE 257 + + + + + I L + V + +V + + L Sbjct: 176 EKLSSIDLLSYLKLCITGEIAPASMPPEGCFLDVVLASRSVVAGYHPRVGENTIFL---- 231 Query: 258 NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS 317 + + LL + + + + + Sbjct: 232 -----------LSIIGYLNE-------ETIPGLLEELGTYPLVYRWSNRFIPFSEATAER 273 Query: 318 EANLKYMDLEKKSKTSYAKWFPSV-----------EKEAKEWGELRQRLGSGQSSVVSYF 366 E + K + ++ + + L + Y+ Sbjct: 274 EIKRYVRNWNNKIRGFSGVLKEALWGKVSNKVDHDAMQMSQQAMAASALNRSARTRFGYW 333 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 + + ++ +D+ ++GF + + +L LP L + Sbjct: 334 SSALVLMHPDIPLLIQAARDLTAYLEQSGFSCVQEDIHAFDAWLGTLPGHGSCHLRRVFI 393 Query: 427 EAGVVQRAESFNVANLMPLVADNPL-------------TPAGLLAPTYRNQLAFIDIFFR 473 S N+A+++PL +P A T + Sbjct: 394 N--------SMNLAHVLPLQTVWTGATYSSTESLLPACSPPVFYAETSGKTPFRFHM--- 442 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD 532 + + G +G+GK+ + LI L G VFD + L + G + D Sbjct: 443 -DVEDVGHQVILGPTGSGKSTYLGFLIAQFLRYHGAQIFVFDKDYSQRGLTAALEGYHYD 501 Query: 533 ---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL-AKE 588 ETL F P +++ + ++ ++ N NL + V + + Sbjct: 502 IGQSETLAFCPLEDLSSEAKQLRAIQFIEDLVFLQNVNLTPEIRHAIGSVVASLAENNHK 561 Query: 589 NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD 648 + + ++N + + L+ YT G + + ++ +++ Sbjct: 562 HSRTLTVFRSEIQN-----------------EVVRSALNYYTLEGQF-KLLDASSNAIQT 603 Query: 649 DAKMVVLELG-GLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNH 707 DA + E+ L+ +P + + ++ ++ I + R +L +++E W + Sbjct: 604 DAYLQTFEMSWVLKQKPEIAIPLLRTIFDRITTSLEDNHRQGPRLIILEEAWLYVSH--P 661 Query: 708 KVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA---SSAARAAWGNSSYKIILKQSAK 764 ++ +T R+ + TQ++ D + + KI L + Sbjct: 662 LFVRQLKDWLKTCRKKNARVVFATQSLADLYDPSNKGLTETTATILESCPTKIFLPHPSM 721 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSS 824 + Q ++I + Q + L L ++ L+ A Sbjct: 722 DAEIKTLYQKIGLTERQLEII--MHSIPKQHY---YLTSPEGHRLIDLNLERLTLAFVGL 776 Query: 825 DGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 + + R S + + ++ Sbjct: 777 SREKTNALLRCRATYAS--DWLSHWLQQEE 804 >UniRef50_A5FU41 Type IV secretion/conjugal transfer ATPase, VirB4 family n=3 Tax=Alphaproteobacteria RepID=A5FU41_ACICJ Length = 797 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 118/877 (13%), Positives = 235/877 (26%), Gaps = 122/877 (13%) Query: 29 NEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING---ANESIVEAL--- 82 N + E S + LPY + + L M+D ++ M E A+ +L Sbjct: 4 NRIRAERSAER---YLPYLGHVRPDILLMDDGSVLAMAEIPGAPYELAADADRAASLVTV 60 Query: 83 DHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 + + + + L + G ++ + + ++ + A + Sbjct: 61 NALCKNVADDNVTLHSAFVRGPGAG-QLAHAVMPNEFAASLDRAYRERVLAGRLYQNTWY 119 Query: 143 FPLPEGMNLPLTLRHYRVFISY-----CSPSKKKSRADILEMENLVKIIRASLQGASITT 197 + PL + S + I ++E + + I +L + Sbjct: 120 LTVIVSPRNPLGGKAGGATASLFGGKRERQKPHATAEGIRQLEEVWQTISQTLAPYDVRR 179 Query: 198 QTVDA--------QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 + + + ++ + L + Sbjct: 180 LGLRPAANGQFYFSEIAEALRLILTGTAAPVPLVSGPLGAALYTDRAIFGRRVFELRGPG 239 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 G F P + + + + S+ CP ++ T Sbjct: 240 VSRFG------------AIFGYREYPSETY--------AGMYDGVFSLPCPVVMVHTFDF 279 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 + + LK + + + + + + L SG+ ++ + ++ Sbjct: 280 HARHTSEKRLGLKAAQMTAAND--------KARSQISDLADAQDHLASGKIAMGEHHFSL 331 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 T + D E + +G + + LP K G Sbjct: 332 TVYA-DTIEELDRLSGLTRTVIANSGGVVAQESAGLEAAYFAQLPGN-----RKWRTRPG 385 Query: 430 VVQRAESFNVANLMPLVA------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMA 483 + N A A PA T + T A Sbjct: 386 ---TITTRNFAAFSGFEAFPRGQRAGKWGPAMARFRTTAGTAYDYVPHVEDVGMT----A 438 Query: 484 VCGTSGAGKTGLIQPLIR----SVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETL 536 + G G GKT + L+ G V FD G + LC +GG YL G Sbjct: 439 IFGKIGQGKTTFMLFLLALFPQYFAARNGAVVFFDKDRGGELLCRAVGGRYLVVRAGRDS 498 Query: 537 RFNPFANITDIDQSAERVRDQLSVMASPNG--NLDEVHEGLLLQAVRASWLAKENRARID 594 P + + +S + L+ + +G L + L + V+A + + Sbjct: 499 GLAPLKALDNTPESVAFLVQWLTALIQQDGHGPLPPEDDARLTRGVQALLRLAPDMRSLA 558 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 + FL + L+++ G+ G F+ + + +A V Sbjct: 559 GLRQFLDWRNPMGA--------------GARLERWCKGGSLGWAFDGERDDVSLEATTVG 604 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 +L + D ++ L+ I + + + DE L N + Sbjct: 605 FDLTAILDNGTVCAPAANYLLYRISQAL----DGRRFVLSCDEFNFYL--LNPLFAKIWA 658 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE---FAKYNQ 771 T R+ + TQ S + + E + K Sbjct: 659 DFMLTVRKSNAVVLLATQEPA---PVLDSPQGDSILRQCQTLVFCPTPGAEEHLYRKRLN 715 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDF 829 +F + DM+ L++ S+ + P A+ SS Sbjct: 716 FTAGEFRAIAEDMLPN--------SRQLLIKRHGGSAIIDFDLSALPEFVAILSSRKSSV 767 Query: 830 EFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLE 866 FV+Q R A MA +E Sbjct: 768 GFVEQLRATHGDDPAA-------WLPAFMARFHEEVE 797 >UniRef50_Q3JDC9 Putative uncharacterized protein n=4 Tax=Gammaproteobacteria RepID=Q3JDC9_NITOC Length = 908 Score = 319 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 153/934 (16%), Positives = 302/934 (32%), Gaps = 120/934 (12%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT--TMGFMLEAI 69 NS + P F+ LLP+ +Y ES F+ + ++G + E + Sbjct: 2 TNSKFPDTSDASPLTSDSIKQHYHRPPSFTDLLPWMEYLPESKTFLLEDGVSLGALFEVL 61 Query: 70 PINGANESI-------VEALDHMLRTKLPRG----IPLCIHLMSSQLVGDRIEYGLREFS 118 P+ G +A+ + +P L I++ + ++ L + Sbjct: 62 PV-GCEARTPAFMTQLRDAIQIAINEAIPERDDAPWVLQIYVQDEPKLT-QLNALLASYP 119 Query: 119 WSGEQAERFNAITRA---YYMKAAATQFPLPE-----GMNLPLTLRHYRVFISYCSPSKK 170 +A ++ ++ +++A + L + G R RV + S Sbjct: 120 SPTVRASDYSQHYQSVMSQHLQAISRPGGLFDDTTVTGSRWQGQQRRIRVVLYRRLISNG 179 Query: 171 KSRADIL---EMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQL 227 KS A I + ++ ASL A I Q + QAF + N NP L Sbjct: 180 KSPAAIEVEEAINDVATKWIASLASAGIKVQRANGQAFYQWLLSWFNPNPPLADGNPEAL 239 Query: 228 --------DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAF 279 D + E R+D T + L R P+I Sbjct: 240 LQLAPYPGDENLPFGHDFAEQLTLSMPRSDEATASWV-FDNMPHTVVTIQSLRRAPDIGH 298 Query: 280 LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP 339 + + + I+ +TL ++ Q T + + K + Sbjct: 299 FTAERQAGDQVFSLFDRLPEHTIMAITLTLKPQDTTRNHIA--------QIKRASVGDSA 350 Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI 399 ++ + + + G + + DN ++ + NG + I Sbjct: 351 EASITREDAEHVEREMAQGN-KLYPVSMAFYVR-GDNQKSLRNNLNRLHALLLPNGLQPI 408 Query: 400 --SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGL 456 + +++ LP L K + + + S ++ANL+P + T GL Sbjct: 409 AQEADLLSLDSYIRNLPMAYDADLDKSRRRS---RLIFSRHIANLLPFYGRSRGTGHPGL 465 Query: 457 LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDM 515 + + D R N +M + G +GAGK+ L+ L++ ++ + + Sbjct: 466 VFYNRGAEPLVFDPLHRDDRKKNAHMLILGPTGAGKSALLVYLLQQMMARHRPRIFIIEA 525 Query: 516 GDGYKSLCE--NMGGVYLD----------------------GETLRFNPFANITDI---- 547 G + L + G+ ++ FNP + Sbjct: 526 GASFSLLGQHFAHHGLSVNQITLNPNVDVSLPPFTDALRLLDRRHAFNPLSVDESTMEET 585 Query: 548 ------DQSAERVRDQLSVM------------ASPNGNLDEVHEGLLLQAV----RASWL 585 + RD L M + L L+ A+ + Sbjct: 586 LDEDDEIEEEGGGRDILGEMEIAARIMITGGDEREDARLTRADRLLIRNAIFLAAKTVKE 645 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 + DVV+ + + + + E R+R EM + + +G G +FN S Sbjct: 646 TSRTQVITQDVVNAFQTIATNAELPE--HRRNRALEMGDGMALFC-SGLAGHFFNRPGQS 702 Query: 646 LRDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLL 702 + +LE+G L E L S++ +I + + R + L V DEG + Sbjct: 703 W-PAVDVTILEMGMLAREGYEDQLTVAYLSMMSHINDLVERHQHDDRPTLVVTDEGHII- 760 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 N + ++ K + R+ + TQN+ DF A+R + + L Sbjct: 761 -TTNPLLARYVVKITKMWRKLGAWFWIATQNLEDFPD-----ASRKMLNMMEWWLCLVMP 814 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 +E + + QR+++ + + ++ + + R LS A+ Sbjct: 815 KEEVEQIARF--KDLNDEQRNLLLSARKEPGK-YVEGVVLADKVEALFRNVPPALSLALA 871 Query: 823 SSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSG 855 ++ + +E S EAV+++A + Sbjct: 872 MTEKHEKAERAAIMREKNCSELEAVYEIAQRIEQ 905 >UniRef50_D2QVN3 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVN3_9SPHI Length = 792 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 130/838 (15%), Positives = 281/838 (33%), Gaps = 87/838 (10%) Query: 56 FMNDTTM--GFMLEAIPINGANESIVEALDHMLRTK---LPRGIPLCIHLMSSQLVGDRI 110 + D + G+ E + +AL LP G + + + R+ Sbjct: 1 MLKDGRVAIGYRFEGVEAESITSGEYDALGSAFYRATRTLPVGTVIQ-RMDAYYTERHRM 59 Query: 111 EYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKK 170 G+RE + + ++ + + AA F P T ++ P K Sbjct: 60 PKGVREQTNAPFTQQQHGHLQERSVLHHAAYLFISFGNERQPRTNPANTIWARLGLPMLK 119 Query: 171 K----SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQ 226 A + E + S+ + +D++ ++ + N Sbjct: 120 DPFEGIDALVERAERAAEEFTQSISLGRLRLTRLDSEGLENLYFQYFNLE---------- 169 Query: 227 LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 N Q + ++ A ++ LG ++ + + P + + Sbjct: 170 ------FNRQPTTLNRSVQPDATFVGLGEKKVNILTMTGQPSVIYNTQPARTGV-----D 218 Query: 287 YSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP-SVEKEA 345 + N L + P +L + ++ED K E+K + + + Sbjct: 219 APFVSNLALDLQVPHLLVTSFLIEDTEKVIGSLE-----FEQKINRNLDFLMTHENKIKM 273 Query: 346 KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNH 405 E + L + S++S L++ + DN V++ I + G ++ + Sbjct: 274 LELEDYIDGLRTDNKSLISVNLSLVVWNTDNKLREGLVQRGIASFRAMGGADVFVETMDT 333 Query: 406 MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQL 465 F P + L N A + + G L Sbjct: 334 TNLFFALAPGNGYQNYRWLL--------MSGDNAACYLNCATNYRTANQGELLSDRYGNP 385 Query: 466 AFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCEN 525 +++F N N V G +G+GK+ + + ++G ++ D+G Y SL Sbjct: 386 ILVNLFNTD--LNNQNSVVVGPTGSGKSFTMGYFMLQRYEAGRRQIIIDVGGTYYSLMTA 443 Query: 526 MGGVYLDGE---TLRFNPFANITDID-------QSAERVRDQLSVMASPN-GNLDEVHEG 574 +GG Y + ++FNPF + + + L+++ + + Sbjct: 444 LGGRYYQYDPQNPIKFNPFGILVNSAGQYVPDGDKINFLSTLLAIIWKGYKRPVRQAERS 503 Query: 575 LLLQAVRASWL--------AKENRAR----IDDVVDFLKNASDSEQYAESPTIRSRLDEM 622 +L++ + + N + DFL ++ E + + Sbjct: 504 VLVRLIPMYYEWYNTQIEQDPGNPPTPVPSLVGFYDFLYQYLKEKEGTEELVRWHKAFDF 563 Query: 623 IVL---LDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIE 679 L+ + G Y ++ E ++V ++ ++D L V + Sbjct: 564 AEFFTCLEPFVV-GHYRDVLDAGENEDISGYRLVCFDMARIKDNELLKSVVTMLITELSL 622 Query: 680 NRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 + + R P+++ K +DE W +L + +G+F+E YRT R++ G+ ITQ + + Sbjct: 623 DVIRRYPKDV-KYLYMDEAWSML---SEGMGDFVEMMYRTIRKNNGSMCIITQGVKEI-- 676 Query: 740 DKASSAARAAWGNSSYKIILK-QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 + S+ N+ KIIL Q K+ + + + F + D + +K + Sbjct: 677 -EDSAVGPVIIANADTKIILNHQDTKQLDRVSAVL--GFTKHELDKMRSIRVSKT--WRE 731 Query: 799 FLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEG-LSIHEAVWQLAWKKSG 855 ++ + +RL + +S + E ++ +E +I AV Q ++ Sbjct: 732 IFIRQGEYGKVYRLEAALNIYPLLTSKPAEREHLRDLTQEYRGNIVYAVRQFNEDRAA 789 >UniRef50_C2FTT8 Conjugative transposon protein TraG n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTT8_9SPHI Length = 829 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 127/772 (16%), Positives = 257/772 (33%), Gaps = 67/772 (8%) Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY---RVFISYCSPSKKK---- 171 G ++ + + Y A++F L + R Y R +++ KK Sbjct: 67 GEGHIIQKHDVFIKRKYRPKPASEF-LEQKYQEHFEGREYTEIRTYLTVTRQVKKGAFYT 125 Query: 172 -SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPY 230 + ++ + + L GA++ + V ++ + + L Sbjct: 126 YDKKVLVTFGQNMAKVFDLLSGAALNPSYLTEAEINRFVNRVLCMEFEQPHITLDNLRCG 185 Query: 231 SDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNP--EIAFLWNMADNYS 288 Q + + + ++ L E + TAR + P + FL N+ + Sbjct: 186 DRE-LQIGDRAVRCISMVNTDSVDLPEKVGSFTARTETNGMRDFPVDNLFFLHNVPGYRT 244 Query: 289 NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 + N L I Q T + +K P+ ++ Sbjct: 245 IIYNQLLEIP------------SQQITLGKLEVKRKRHSS-------VPDPANLMCVEDI 285 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 L + +V ++ + + + I + + G +N + Sbjct: 286 DRLLVDVARDNQLLVHAHYSMIVCA--DTDRIDKTANFIEAALFQQGIIPSRNAYNQLEL 343 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA---GLLAPTYRNQL 465 F LP + + + A P L + Sbjct: 344 FRCALPGNGVELKKYD-------WFLTTADAALCFFFKERLPTDEPSEFLLRFTDRQGVP 396 Query: 466 AFIDIFF---RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSL 522 ID R N N V G+SG GK+ I + + L V+ D+G Y L Sbjct: 397 VAIDPSDLVMRTGRIKNRNRFVLGSSGTGKSYAINAICQQYLQYNTDVVIVDVGHSYSGL 456 Query: 523 CENMGGVYL---DGETLRFNPFANITDID--QSAERVRDQLSVMAS-PNGNLDEVHEGLL 576 C GG Y+ + + + NPFA + + + + + ++ G + V ++ Sbjct: 457 CSTYGGKYITYSEEKPITMNPFAISEEEYNIEKKDFLITLICLLWKGSEGTVTTVERDVI 516 Query: 577 LQAVRASWLAKENRARIDDVVDFLKNASDSE-------QYAESPTIRSRLDEMIVLLDQY 629 + A + ++A I+D VD L S E +I ++E +L ++ Sbjct: 517 SNVISAYYAHHFDKA-IEDRVDKLDFNSFYEFAVRKIPDIRNEESIAFDVEEFRFVLKKF 575 Query: 630 TANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNL 689 G Y N + + + +V E+ +++ +LL V ++ +M R +N Sbjct: 576 YRGGEYEAILNEEADQSLFNEQFIVYEIDNIQNNKTLLPIVTLIIMDLFVQKM-RHRKNR 634 Query: 690 KKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAA 749 +K +++E WR + + + F+ +T R+ G I +TQ I D + + Sbjct: 635 RKTLILEEAWRAIS--SPMMANFLLYLNKTVRKFWGEIIEVTQEINDIIGNPI--IKDSI 690 Query: 750 WGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ--WFSSFLLQVENHS 807 NS I+L+Q+ +F K +L ++ KD F+ F ++ N Sbjct: 691 INNSDTIILLQQNEADFRKVAELLSINEAEQKKIFTINRLDNKDGRARFNEFYIRRGNTG 750 Query: 808 SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMA 859 + + V ++++ P+ V+ K S A+ +A Sbjct: 751 EVYGVEVSIYHHLAFTTEKPEKSAVEIYAKHHGSYPAALTAFVSDMEKSGLA 802 >UniRef50_C9RCA0 AAA ATPase n=1 Tax=Ammonifex degensii KC4 RepID=C9RCA0_AMMDK Length = 569 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 103/584 (17%), Positives = 198/584 (33%), Gaps = 60/584 (10%) Query: 285 DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK----SKTSYAKWFPS 340 D L+ +I + + + + + + K Sbjct: 10 DVLLGWLDEVFAI-GQVDVAVHVRPVPDRLVVKSLTDRVVSARSQLIIEVKKGSVVRLSE 68 Query: 341 VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS 400 +E ++ L++ + + + ++ + IT + +D E +++ N + E+ Sbjct: 69 LEAVIRDLEGLQEAIQTNRDRMLHVTVVITVWGRD-EEDLDNRSKELENILARKAAEVRP 127 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP- 459 F + F LP + L G V+ +P+ A P+G Sbjct: 128 LVFRQLEGFKNTLP-----VMTYSLSSPGAVRNLTLGGAMACLPVTASELSHPSGAFLGF 182 Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 T F D F N ++A G +G+GK+ ++ LI + +G VVFD Y Sbjct: 183 TSTGAPVFFDPFVGPPWLPNPHVAAFGYTGSGKSVTLKLLIGRLSLAGVRFVVFDPEGEY 242 Query: 520 KSLCENM-GGVYLD---GETLRFNPFANITDID-----------QSAERVRDQLSVMASP 564 + C + GG + G NP + + D VR ++ +A Sbjct: 243 RRPCRELWGGEVITLEAGVPAGVNPLDLLPEKDPDTGREVVNVADKVADVRALVATIARG 302 Query: 565 NGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVD--------------FLKNASDSEQ 608 G L LL AVR + + + + + + LK Sbjct: 303 FGGRELTPQEVSLLEAAVRELYSERGVTSDPESLYERGRALPDGSFAVGRVLKRMPRLSD 362 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 A ++ ++LD + + G + E DA +VV +L ++D + L Sbjct: 363 LAAKLERWPETKDLRLILDPFLEGSSLGMFDC--ETDKELDAPVVVFDLSRIKDEFTKL- 419 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 MF ++ + +R KK+ V+DE W + +F+E R R+H + Sbjct: 420 YAMFVVLTWCWHRFALRHAG-KKMVVLDEAWMFAKW--PDSAKFLETLARRGRKHRTGLV 476 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 +Q+I +F A RA + + +IIL Q+ + + + +R Sbjct: 477 VASQHIEEFL---AREEGRAVISSCATRIILGQNPTVAREVAEAFRLPAGAEER------ 527 Query: 789 GAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFV 832 LL N + ++ P R + G + + Sbjct: 528 --LAGYANGLCLLVAGNQMAEVQVECLPYERQFVFTGGAESAQL 569 >UniRef50_Q6LGX0 Hypothetical TrbE protein n=1 Tax=Photobacterium profundum RepID=Q6LGX0_PHOPR Length = 798 Score = 315 bits (807), Expect = 5e-84, Method: Composition-based stats. Identities = 107/840 (12%), Positives = 245/840 (29%), Gaps = 115/840 (13%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLR-----TKLPRGIPL 96 LL + + D + ++ A + + D + R + L G + Sbjct: 16 DLLNWAAMVDNGVMLNKDGSFTAAWTYTGLDAATATNTDRNDAVYRVNRALSSLGSGWMI 75 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE-----GMNL 151 + + Q + + + R ++ + Sbjct: 76 HVDAIRQQTGAYPPPESSH---FPHPALQLIDDSRRIFFEGQGDKYTSTTVIAVTYMPPV 132 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA------- 204 + + + + + ++ + I L AS+ ++A Sbjct: 133 KTLSKITDLIFEHQDKKESIATKNLARFNEKLNDIEGRL-SASLRLTRLEAHQEDGRWVD 191 Query: 205 -FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST 263 F+ + + + + + S + + F+ KV Sbjct: 192 PFLSYLRYCLTGHWHLITVPIVPMAIDSLIGAVDMWTGFEPKVD---------------D 236 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 A + + P ++ N+LN ++ + + V D + + Sbjct: 237 AYVSLISIDGFPLLSSP--------NVLNALDYMNVEYRWSTRFVFFDNREAIQLLKTER 288 Query: 324 MDLEKKSKTSYAKW--------FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 E+K + K ++ L +G+ Y KD Sbjct: 289 KKWEQKVVSFKDKLIKNPNPPIDADALNMVNQYESANTALSAGELQYGHYTSTFVLRHKD 348 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAE 435 + A E GF N L LP + + + L Sbjct: 349 RHALAEMTEYTTKTLNLIAGFSCRVETVNATEALLGTLPSDSLHNIRRPL--------LS 400 Query: 436 SFNVANLMPLVADNPL------------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMA 483 + N+ +L+PL + +P ++ N +++ + + Sbjct: 401 TDNLCDLLPLASIWTGSETCPCPFYPDNSPPLMVCTAQGNTPFRLNLHVEDV----GHTL 456 Query: 484 VCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNPFA 542 + G +G GK+ + ++ VFD +L + +GG ++D FA Sbjct: 457 LFGPTGKGKSTALAIMVAQCFRYPNAQVFVFDKKRSMYALSQ-LGGTHIDIGDNSAPSFA 515 Query: 543 NITDIDQSAERVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLK 601 + D+D E D + + + ++ + A+ + + + + Sbjct: 516 PLCDLDNDFEWCCDYIEQLLVLQSVSVTPAMRSAIFAALTTMRGSPIQ--TLSEFKAQCQ 573 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 + +E+ ++ YT G G ++ E +L A +V E+ GL Sbjct: 574 H-----------------NEIKTAIEYYTVQGRSGDLLDAQEDTLSL-ASFMVFEIDGLM 615 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 R ++ Y+ R+ R+ V+DE W + F + +++ + R Sbjct: 616 KRGDKDAI---PVLSYLFRRIERSLNGQPSFIVLDEAW--VAFSHPIFLAMLKEWLKELR 670 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + A I TQ++ D S + +I L + Q Sbjct: 671 KANCAVILATQSLSDAIK---SGILDVLVESCPTQIFLPNEKAPL-FAETYHQFGLNDKQ 726 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQQKRKEGL 840 +++ +D + + + L +DP++ A + + D + V+ E Sbjct: 727 IELLRHATPKRDYY-----VCQPTGNRLIDLSLDPIALAFVAAGSKDDIQRVKALVHEHQ 781 >UniRef50_B2TSH9 TriC protein n=3 Tax=Enterobacteriaceae RepID=B2TSH9_SHIB3 Length = 915 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 119/865 (13%), Positives = 254/865 (29%), Gaps = 118/865 (13%) Query: 42 RLLPYRDYNQESGLFM-NDTTMG-FMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIH 99 + +PY + ++ + N + + L I + ++E +D + T + L + Sbjct: 113 KYIPYSSHVDKNIVKTKNGDYVATWQLMGINFESISAEMLETIDSQVATLVRSFSGLPVS 172 Query: 100 LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYR 159 + + + + I+ YY +F + R Sbjct: 173 FYNHSCRASFYDAFTTKSGNK-----YADIISDCYYGSMKKNKFKGNTLYFTLIYRPDGR 227 Query: 160 V-----FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA------FIDI 208 V K + M ++ +L + + + + Sbjct: 228 VEKLEKRKKSIKEKKDDIHIHVKRMNEMINTFSGALDKFTCKLLGMYEENGKVFSSQLSF 287 Query: 209 VGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILN 268 ++ + + V D+ D + + + Sbjct: 288 YNYLLTGKLQKIRVTDSPVYN--------VLGGVDVFFNHDTGQICR----IDGNKFFRS 335 Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 + ++ S + + +I+T + + + S L+ Sbjct: 336 IEIKDF--------CSETASGVFDVLQYSDADYIITHSYTSMSKSEALSTIKRAEKQLKS 387 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + +E + + + SG S Y I D+ E I Sbjct: 388 TED--------DAVTQLQELEKAKNDIVSGDISFGYYHFTIMVMA-DSIRELDESVSKIT 438 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA- 447 F G + + LP + + + N L Sbjct: 439 ADFTDLGIIPALSTMSLPAAYFAQLPAVFHL--------RPRLSPVSNVNFVELASFHNF 490 Query: 448 ------DNPLTPAGLLAPTYRNQLAFIDIFFR------GMNNTNYNMAVCGTSGAGKTGL 495 N T A + T Q ++++ N V GT+G+GKT Sbjct: 491 YQGKRDKNCWTEAVAILKTPSKQAYYLNLHNSVLFKDETGEKNLANTKVIGTAGSGKTMF 550 Query: 496 IQPLIRSVLDSGGF-------------AVVFDMGDGYKSLCENMGGVYLD---GETLRFN 539 + L S+ V D G + +GG Y GE +N Sbjct: 551 LSYLACSLQKYNNPETFADSAKNKKLTCVFLDKDRGAELCIRMLGGEYYTVKSGEPTGWN 610 Query: 540 PFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVD 598 PFA ++ V+ + ++ + NG L L+ ++V A R + Sbjct: 611 PFALEA-TKRNRIFVKQLMEILCTRNGERLSTRERLLISESVDAVMDFPPGEMREYGITR 669 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLEL 657 L++ + E + +I+ L Q+ + +G F++ + + ++ Sbjct: 670 MLEHLMQRDDRDEQE------NGIILRLSQWANSQAHGWVFDNAKDTFNIQHVNNFGIDG 723 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 D P + + F L+ I + + + +DE W+ L ++ +F+ Sbjct: 724 TEFLDDPMVCAPITFYLLYRITQLL----DGRRLVIFLDEFWKWL--QDEAFSDFVYNKL 777 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 +T R+ G I TQ+ + +K S RA S I L ++ Y + Sbjct: 778 KTIRKLNGLVIPATQSPDEILKNKIS---RAVVEVCSTSIYLANPDADYNDYVEGLK--L 832 Query: 778 LPLQRDMIGKFGAAKDQWFSSFLLQ--------VENHSSWHRLFVDPL--SRAMYSSDGP 827 P + ++I FL++ ++ S+ L + L + S+ Sbjct: 833 TPEEFNIIKNLDPM----SRQFLIKKSSLKKGDGKSFSALATLDLSGLGGYLKILSASAD 888 Query: 828 DFEFVQQKRKEGLSIHEAVWQLAWK 852 + E + EG+ + V + + Sbjct: 889 NLEIFESIYHEGMEPDDWVPEYLER 913 >UniRef50_Q7WZM0 Putative mating pair formation protein n=1 Tax=Stenotrophomonas maltophilia RepID=Q7WZM0_STEMA Length = 820 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 106/861 (12%), Positives = 245/861 (28%), Gaps = 130/861 (15%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPR- 92 LL Y + + + GF + + H + L Sbjct: 10 KAKSLPDLLNYAALIEPGTVLCKSGALLAGFFFRGDDHASSTAANKNYAAHAVNDALKSL 69 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM-----KAAATQFPLPE 147 G + + Y + S ++ + R + L Sbjct: 70 GSGW--TSWTETVRYRAPGYYPADTSHFTKEVPKLIEAERRETFTGQNVFKSENILILQY 127 Query: 148 GMNLPLTLRHYRVFISYC--------SPSKKKSRADILEMENLVKIIRASLQGASITTQT 199 + L+ + + E +K L A + + Sbjct: 128 LPPMRPELKAGSKMKTVSEMVIEGDDVDDDTVQERILAEFNKALKDTEDRLGNA-VMIRR 186 Query: 200 VD-------------AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKV 246 + A ++ + +++ + + S L + + ++ Sbjct: 187 MGRYDGVDDFGGEYVADELVNTLRCIVSGESMEVALPECGMYMDSWLFGEDLYAGTTPRL 246 Query: 247 RADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT 306 I + P ++ ++L+ ++ P+ + Sbjct: 247 ---------------GDKFIGVIGIEGFPARSYP--------SILSMLNEMALPYRWSNR 283 Query: 307 LVVEDQVKTHSEANLKYMDLEKKSKTSYAKW-------FPSVEKEAKEWGELRQRLGSGQ 359 + D+ + ++K + A+ ++ + SG Sbjct: 284 FIHLDRHEAEFALGRYVSKWKQKIRGFVAQMTNKQGSINTDALSMTQQAESAVNEVRSGD 343 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 S+ Y I +D A + + + + R+ F N M +L + A Sbjct: 344 SAYGYYTSCIVLMHEDPAWVAAK-ARLVQKALRRIRFAGRIESINCMEAWLGSIAGHAHA 402 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADN------------PLTPAGLLAPTYRNQLAF 467 + + L + N+++LMPL A +P ++ T + Sbjct: 403 NVRRPL--------ISTRNLSHLMPLSAPWAGLATNPCDLYPKGSPPLMMTATTGSTPFN 454 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENM 526 +++ + + + G +G GK+ L+ + + FD G L M Sbjct: 455 LNLHVSDV----GHTLIFGPTGGGKSTLLATIAAQFQRYPNSSVMAFDKGRSLLPLALGM 510 Query: 527 GGVYLDGETLR---FNPFANITDIDQSAERVRDQLSVM--ASPNGNLDEVHEGLLLQAVR 581 G Y G F P ++ + ++ + + ++ + + +A+ Sbjct: 511 GMHYDIGSEEGGPQFCPLQHLEN-AADIAWAQEFIEMCYSLQAGEDMVPTQKQAVYEALL 569 Query: 582 ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 + K++ + D V L ++ L+ YT +G G ++ Sbjct: 570 SL--QKKDHRSLTDFVSDLPE------------------DLRAALNYYTISGPMGYLLDA 609 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRL 701 L+ D V+E+ L ++ Y+ R ++ + + ++DE W Sbjct: 610 QTDGLK-DTPFNVIEVDELMKLGDKAS---LPVLRYLFRRFEKSLKGQPAMLILDEAWMA 665 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 L N ++ + R+ A + TQ++ D + S + KI L Sbjct: 666 LG--NPVFKAALKMWLKELRKANCAVVLATQSLSDAAN---SGILDVLRESCPTKIFLPN 720 Query: 762 SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM 821 + +I K + ++ S L S L + L+ A Sbjct: 721 KDA-LQDTALYKSFGLNEQEIKLISKAKPKAEYYYKSAL-----GSRVFNLRLGRLALAF 774 Query: 822 -YSSDGPDFEFVQQKRKEGLS 841 +SD ++ K+ + Sbjct: 775 TAASDKVSIARIRALHKQHGT 795 >UniRef50_C2LLI5 Type IV secretory pathway, VirB4 component n=31 Tax=Enterobacteriaceae RepID=C2LLI5_PROMI Length = 955 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 132/928 (14%), Positives = 285/928 (30%), Gaps = 112/928 (12%) Query: 18 ALKLPDESAKANEVLGEMSFPQFSRLLPYRDY-NQESGLFMNDT-TMGFMLEAIPIN--- 72 L P + +A+E + P F LP+ ++ ++E L ++D ++G + P Sbjct: 44 PLSRPGKMTRADEQKIYHANPSFIDYLPWVEFLDEEQCLLLDDGVSVGAVYAVEPAPTEG 103 Query: 73 ---GANESIVEALDHMLRTKLPRG----IPLCIHLMSSQLV-------GDRIEYGLREFS 118 G I +A++ L+ L + V D I R + Sbjct: 104 RSAGRLLEIRDAVEDALQDSLDEHDDNPWVVQFFCQDEDDVSVTLATLRDYILPAARGTA 163 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSK-KKSRADIL 177 ++ R + G R R+ + + + Sbjct: 164 FTEAWLTEMARHLRGIARPEGLFKDTEVTGQPWRGQQRRTRMVVYRRLGNSYTDPMPPVA 223 Query: 178 EMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQC 237 + + + +SL A + D + + N PD + + + Sbjct: 224 MLNQMCDRLVSSLGSAGVQCVRQDGRQVHQWLLRHFNPAPDWVDRE-TLYREGAYWPAAE 282 Query: 238 VEDSFD-----------LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 + G+ + + L + P L Sbjct: 283 EAPGTLPVLKDFAETLWFTPPRSDVENGVWWFDNLAHGVVNIEKLRKAPGPGHLTGEQKR 342 Query: 287 YSNLLNPELSI-SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEA 345 +N + + +L++T+V + Q ++ L K S ++ Sbjct: 343 GDKNINALMDLFPEGTMLSMTIVTQPQDT----LEQEFTRLGKNSVGE----NTDSQRTR 394 Query: 346 KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNH 405 ++ R LG + + L++ + E + D+ + G E + P ++ Sbjct: 395 RDVETARGLLG-HRHKLYRASLSLLLRAG-SVEELNKKRVDLTATLLNAGLEPVKPEYDV 452 Query: 406 --MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYR 462 + +L LP K+ + ++A L+P+ T G Sbjct: 453 APLNGYLRALPMCFDPQTDKKHWYTRLTW---VQHLAGLLPVTGRTSGTGHPGWSFFNRG 509 Query: 463 NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMGDGYKS 521 + D + N ++ + G +GAGK+ + + ++ + + G+ + Sbjct: 510 GGVLTFDPQNKQDRTQNAHLLLFGPTGAGKSATLCAQLSQLMAVRRPRLFIAEAGNSFGL 569 Query: 522 LCENMGGVYLDGETLRFNP----------------------FANITD-------IDQSAE 552 L + + L + P A D + + Sbjct: 570 LADYYASLGLSVNKVSVKPGSGVRLPLFADAHQLLMMDEQRLALNADELPETDSESEDDD 629 Query: 553 RVRDQLSVM------------ASPNGNLDEVHEGLLLQAVR---ASWLAKENRARIDDVV 597 RD L M L ++ +A+ + A + + D+ Sbjct: 630 GQRDILGEMEISARMMITGGDVREEAELKRADRAMIRRALMAGARASYAADRQMLPADLQ 689 Query: 598 DFLKNAS----DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 + L S + E A +P R++ EM L +T G++ + L +A + Sbjct: 690 EALYALSRGEGEEEGRALNPQRRAKAAEMAESLGMFTEPGSFEHELFNLPGELWPEADVT 749 Query: 654 VLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVG 710 +++LG L E + + M SLI I N R R V+DE + N + Sbjct: 750 LIDLGHLAREGYEAQMALTMVSLINSINNIAERDQYRARDINFVVDEAH--IVTVNPLLS 807 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN 770 ++ K + R+ TQN+ D+ A + + + L KE Sbjct: 808 PYVTKVVKMWRKLGAWLWLATQNLDDYPDC-----AEKMLNMAEWWVCLTMPQKEVEAIA 862 Query: 771 QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFE 830 + Q+ ++ ++ ++ + R+ L A+ ++ + + Sbjct: 863 RF--KTLSEEQKQVLLSAAKLSG-CYTEGVVLARKVEALFRVVQPSLYLALGMTEKEEKQ 919 Query: 831 FVQQKRKE-GLSIHEAVWQLAWKKSGPE 857 + ++ G S EA +++A + Sbjct: 920 QRRVLMEQYGCSELEAAFRVADELDRKR 947 >UniRef50_B2IAS2 Type IV secretion/conjugal transfer ATPase, VirB4 family n=39 Tax=root RepID=B2IAS2_XYLF2 Length = 854 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 111/879 (12%), Positives = 251/879 (28%), Gaps = 127/879 (14%) Query: 40 FSRLLPYRDYNQESGLFMNDTT--MGFMLEAIPINGANESIVEALDHMLRTKLPRG---I 94 + LL Y + + + + ++ A E+ E + + L Sbjct: 43 LADLLNYAAVVDDGVIVGKNGSFMASWLYRGADNASATEAERELISFRINQALASFDNAW 102 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLT 154 + + + + L F + + R + Sbjct: 103 MVHVDAVRRPAPS-YSDPSLSHF--PDAVSAAVDEERRRLFESIDTLYEGFFVVTVTWFP 159 Query: 155 -----LRHYRVFI---SYCSPSKKKSRADILEMENLVKIIRASLQ-GASITTQT------ 199 R + + K ++ I + V + L + Sbjct: 160 PVLAERRFVELMFHDDAEKPNDKTRTAHLIDHFKREVINLENRLSLAVELERLRGVKITK 219 Query: 200 -----VDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 V + + + + + S + Q + K+ +++ + Sbjct: 220 EDGSTVTHDQQLQWLHFCVTGLNHPIQLPSNPMYIDSLIGGQELYPGVVPKIGRNFIQV- 278 Query: 255 LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 I F L P +L+ + + + + D + Sbjct: 279 ---------VAIEGFPLESYP-------------GILSVLAELPIEYRWSSRFIFLDHHE 316 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE-----WGELRQRLGSGQSSVVS--YFL 367 S ++K + + + F + E + + S +VS Y+ Sbjct: 317 AVSHLEKFRKKWKQKMRGFFDQVFNTNTSHVDEDAVSMVADASSAIAETNSGLVSQGYYT 376 Query: 368 NITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 ++ ++ E + + + + F N M +L LP + + + L Sbjct: 377 SVVVLMNESREQVEQSARRLEKAINALAFTARVETINTMDAYLGSLPGHGVENVRRPLLN 436 Query: 428 AGVVQRAESFNVANLMPLVADNPLT------------PAGLLAPTYRNQLAFIDIFFRGM 475 + N A+L+P P L T N I++ R + Sbjct: 437 --------TMNFADLLPTSTIWTGENRAPSPLFPPNAPPLLHGVTSGNSPMRINLHVRDL 488 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL--- 531 + + G + GK+ + + G FD G C+ M G + Sbjct: 489 ----GHCIIFGPTRTGKSTKLALVAFQWRRYLGARIYAFDKGLSMYPTCKAMHGHHFSIA 544 Query: 532 -DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 + + L F P + + + A + +++A + +A+ + +K Sbjct: 545 SNTDKLAFAPLSRLDTRTRRAWAMEWIDTILALNGVITSPAQRNAIAEAILSMSKSKA-- 602 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 + +F+ D + L YT +G G ++ E L A Sbjct: 603 ---STLSEFIVTVQDEV--------------IREALKPYTVDGNMGYLLDAVEDGLEL-A 644 Query: 651 KMVVLELGGLEDRPSLLV-AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKV 709 + E+ L V+ L + IE + L ++DE W +L Sbjct: 645 DFMTFEIEQLMGLGEKFALPVLLYLFMRIEESL-SEEDARPTLLILDEAWLMLSHTT--F 701 Query: 710 GEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKY 769 + IE+ R+ + + + TQ+I + S +++ +I L K Sbjct: 702 RDKIEEWLRSMAKKNCSVLMATQSISEAAK---SGILDIITESTACRIFLANPNAREEKT 758 Query: 770 NQLY-PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDGP 827 ++Y Q ++I +D ++ E ++L + PL+ A S+D Sbjct: 759 AEIYGRLGLNNRQIEIIASAVPKRDYYYV-----SEKGRRLYQLALGPLALAFVGSTDKE 813 Query: 828 DFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLE 866 +++ + + L+ ++ Sbjct: 814 SIAMIRKLEALHGD------AWVHEWLRLKGLRLDEYVS 846 >UniRef50_Q120F2 Type IV secretory pathway VirB4 components-like n=1 Tax=Polaromonas sp. JS666 RepID=Q120F2_POLSJ Length = 846 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 140/864 (16%), Positives = 268/864 (31%), Gaps = 112/864 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGA----NESIVEALDHMLRTKLPR 92 F+ LLP+ + D ++ G+ E + G ++ + L LRT R Sbjct: 17 SFAELLPWFAQVAPGLVICQDGSLLAGYTFEGSDVEGRQDFESDQKINQLQTALRTLTDR 76 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM-KAAATQFPLPEGMNL 151 + + ++ EQ E+ + R + + F P Sbjct: 77 ITMWTVQERRFVSGYPKGDFSSPIARAIDEQWEKSISKQRNARLTQRIYLGFNFPNSSEA 136 Query: 152 PLTLRHYRV-------------FISYCSPSKKKSRADILEMENLVKIIRASLQGAS---- 194 + I K ++ ++ L S Sbjct: 137 FFEALRAELEENDGKVLAALGGLIKRRLSDKGAIAKVRGQLADMTTEFEKLLGAFSGIVE 196 Query: 195 --ITTQTVDAQAFIDIVGEMINHNPDSLY---PKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 + + ++ + F+ + N PK + + + + + Sbjct: 197 TNLGFKRLEGEEFLGDLYSRANLASPPGPVRLPKGGAYLNTALASDTLIRRQDQFEFK-- 254 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 G +A + P+ + YS ++ +++ C ++L Sbjct: 255 ---------GPTKSAYVAALSTTGTPQ--------EAYSGYMDSLMAVDCEYVLVQCYRF 297 Query: 310 EDQVKTHSEANLKYMDLEKKSKT---SYAKWFPSVEKE---------AKEWGELRQRLGS 357 D+ M + K+ + E E A++ + L + Sbjct: 298 IDRTVAEKAIQDAEMFYRSEVKSVLTRVFERMTDSESEKVNTGNLQLAQDAQDALVELTA 357 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 S Y + I A + A + ++ R NGF ++ R M FL +P A Sbjct: 358 SDVSYGYYNMTILAL-GTTQKEAENAADLMASNLRANGFTILRERQGLMSAFLATMPGNA 416 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRN----------QLAF 467 L +L A + N+A+L P+ + P L Sbjct: 417 DAILRWKL--------ASTANLADLAPIRTISKGEPTHPLFSRLIGHDVPALARFLTPYG 468 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDMGDGYKSLCENM 526 + F + AV G +GAGKT L+ LI +FDM + Sbjct: 469 VTYDFNNHETDVGHTAVIGGTGAGKTSLMTLLISMFQKYNPGQTFIFDMKYSLMMATVLL 528 Query: 527 GGVYLD-----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAV 580 GG ++D G+T+ NP + + ++R + V+ GN + ++ A+ Sbjct: 529 GGKHIDMGGKGGKTIGMNPVKTML-LANDDMQLRQWVEVLIGAGGNTISSNESQVIYTAI 587 Query: 581 RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 + + + R+ + + A SP + D+ +G Y YF+ Sbjct: 588 QGLRRSPPSTWRLSALYALIAGADQDLAAKLSPYVDRTDDD-------EIGSGPYASYFD 640 Query: 641 SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 +DE + ++V +E+ G+ P L M IE R+ L I+E W Sbjct: 641 NDEDHFQLT-QIVGMEVEGILKTPQLASPFMDYAFYNIERRL---DGATPTLIYIEEAWY 696 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 +L N E E RT R + TQ++ + + N +I+L Sbjct: 697 ML--ANKAFVEKFETWLRTFRSKRAFIVFATQSLGEIARLEN---LEGIVTNIPTQILLP 751 Query: 761 QSAKEFAKYNQLYPD--QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 + LY D Q D++ + +D L+ + + + PL Sbjct: 752 AVKNSVHQQADLYKDVFGINDNQLDLLSRAIPKRDY-----LIVKPSVTRLVSTQMPPLL 806 Query: 819 RAM--YSSDGPDFEFVQQKRKEGL 840 A+ ++ V +G Sbjct: 807 IAINEATTQPSMRSAVLAAAAKGG 830 >UniRef50_Q0ACT3 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0ACT3_NITEC Length = 806 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 129/853 (15%), Positives = 243/853 (28%), Gaps = 110/853 (12%) Query: 28 ANEVLGEMSFPQFSRLLPYRDYNQESGLFM-NDTTM-GFMLEAIPINGANESIVEALDHM 85 + + R++P+ + + N + + +E + G +E V + Sbjct: 15 SQQRRYANEEDSLERIVPFSSIIDDGIVSTKNGDYVRTWRVEGMSFEGLSEEEVYSRMEA 74 Query: 86 LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL 145 L + RI + E + + YY K A Sbjct: 75 LNLFIRGLATGKYAFWV-----HRIRRYASDKLEVPEYNDFSQDLMGRYYEKLADQGMMS 129 Query: 146 PEGM----NLPLTLRHYRVFISYCS---PSKKKSRADILEMENLVKIIRASLQGASITTQ 198 E P L VF K + A + +E + K + +SL Q Sbjct: 130 SEFYLTVVYRPFPLGRGGVFGKLHRTVDEIKNEIAAAVERVEIVSKTVMSSLTKYR--PQ 187 Query: 199 TVDAQAF--------IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 + F ++ +IN + K L Y ++ + Sbjct: 188 QLGNYVFAGRTFSCQLEFYSYLINGFWWRIPVKNLPLYKYLPVSRLLFGNEI-------- 239 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 + + L + +LN L++ C +I T + Sbjct: 240 ----IEYRDTFGSEFGAFLELKDYADYTTP--------GVLNTLLALDCEYIETHSFSPM 287 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 + S + + + + E E + SG + Y ++ Sbjct: 288 TTLDAQSALKKQRNQMISSEDNAL--------SQIVEIDEAIDSVISGNFVLGEYHYSLL 339 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 + + E + F + + LP K Sbjct: 340 VK-GETPDQTREFRSNASQLLNNANFLGVDLEKVTASAYAAQLPCNW--------KSRPR 390 Query: 431 VQRAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN---- 479 R S N + NP A L T + + + + Sbjct: 391 EARISSRNFTGVCSFHTFDSGKRNGNPWGEAVTLFRTPAGAPFYFNFHDTPLGVDSTGNK 450 Query: 480 --YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGE 534 N + G SG GKT L L+ ++L G V FD G + +GG YL +G+ Sbjct: 451 ALGNCQIIGQSGGGKTVLALFLMLNLLKYGTQCVFFDKDRGAEIAIRRVGGKYLALENGK 510 Query: 535 TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARID 594 F PF T V + E L+ AVR+ + ID Sbjct: 511 PTGFAPFKMETTEKNILFWVALIKYCTRRSDVAHTPEEENLIASAVRSVAGMPVQQRCID 570 Query: 595 DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQY-TANGTYGQYFNSDEPSLRD-DAKM 652 V+ FL + + L ++ + G G + L+ + + Sbjct: 571 AVLQFLPVGDPNG--------------LAQRLKKWSISRGNLGWALDCQRDELQFEEGRP 616 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 + D + +M L+ +E ++ +DE W+ L +F Sbjct: 617 YGFDYTDFLDNEEICGPIMMYLMYRVEEQI----DGRLFAFFMDEYWKALSVD--YFKDF 670 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 + +T R+ G + +TQ+ D S ARA ++ I L A + Y Sbjct: 671 AKNKQKTIRKQNGLGVYMTQSPHD---TLQSDIARALIEQTATFIFLPNPAADHDDYVNG 727 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFE 830 + + ++ + + FL++ + S RL + + S + E Sbjct: 728 FK--LTETEFKLVRELQDS----SRMFLIKQGHRVSLARLDLGDFKNEIKILSGSTDEVE 781 Query: 831 FVQQKRKEGLSIH 843 + + R + Sbjct: 782 RLDRLRHKYGDDP 794 >UniRef50_Q6XGG0 Pilx3-4/VirB3-4-like protein n=23 Tax=Bacteria RepID=Q6XGG0_ECOLX Length = 912 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 131/882 (14%), Positives = 278/882 (31%), Gaps = 126/882 (14%) Query: 29 NEVLGEMSFPQ---FSRLLPYRDYN-------QESGLFMNDTTMGFMLEAIPINGANESI 78 E L M Q + +PY + +S L+ MG + ++ES+ Sbjct: 97 KEFLDAMKLNQCATIKKYIPYSSHIHQHVVRSPKSDLYCTWELMGTPFDCE----SDESL 152 Query: 79 V---EALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 L ++R+ G+P+ ++ + + + + ++R YY Sbjct: 153 QFGTNQLHGLIRSF--EGMPVTFYIHNDRNT-------FTDNLHKDSGNPYADEVSRLYY 203 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYC-SPSKKKSRADILEMEN--LVKIIRASLQG 192 R R+F++ C P +A+ M++ +K + +L Sbjct: 204 ASVG--------------LFRRNRLFLTVCYRPFVSLEKAERKRMKDSQKLKELDGALLE 249 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + ++ A + + QL Y L + Y Sbjct: 250 M-LEIKSTLDTALSRYGARPLGTFTEGNAVFSSQLAFYEYLLTHQ-WRKVRVTRTPAYDV 307 Query: 253 LG----------LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFI 302 +G + N N T + E + + +++ L C ++ Sbjct: 308 MGAAALFFSAESGQINHANGTQYFRGLEVKEFSE--------ETATGMMDSLLYAPCDYV 359 Query: 303 LTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 +T + + + L + ++ SG+ + Sbjct: 360 ITQSYTCMSREEAKKAIKRTRRLLMSADDDAVSQRLDLDVALDLL--------TSGKIAY 411 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + +I + + E+ + +I N+ G + + ++ LP Sbjct: 412 GKHHFSIMVYSP-SLESLVADTNEISNALNNIGITPVPAEISLSAAYMAQLPGNYNLRPR 470 Query: 423 KQLKEAGVVQRAESFNVANLMP-LVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYN 481 K + + + N P P A L T +I++ + +N Sbjct: 471 KGELSSQNFVELAALH--NFYPGKRDKAPWGDAMALLRTPSGDGYYINLHNTLADKDEFN 528 Query: 482 ------MAVCGTSGAGKTGLIQPLIRSVLDSGG-------------FAVVFDMGDGYKSL 522 + GT+G+GKT L+ G V D G + Sbjct: 529 EKNPASTCILGTNGSGKTMLMTFFEIMQQKYGREDSFSPDAKTKRLTTVYLDKDRGAEMN 588 Query: 523 CENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQ 578 +GG Y + GE+ +NPF+ ++ ++ + ++ + NG+ + E L Sbjct: 589 IRALGGRYYRVISGESTGWNPFSLPA-TKRNINFIKQLMKILCTRNGSTISPRDERRLSD 647 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 AV A + + L+N + + + + L Q+ G +G Sbjct: 648 AVNAVMNDEPQYRVYG-ITRMLENLPEPATKEAQE------NGLSIRLSQWAQGGEFGWV 700 Query: 639 FNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE 697 F+++ + ++ D S+ + F L+ I + + + + +DE Sbjct: 701 FDNESDTFDISNCDNFGIDGTEFLDDASVCAPISFYLLYRITSLL----DGRRLVIFMDE 756 Query: 698 GWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKI 757 W+ L + +F +T R+ G + TQ+ + D A A +I Sbjct: 757 FWKWLR--DPVFKDFAYNKLKTIRKLNGMLVVGTQSPAEIIKD---DIAPAVIEQCGTQI 811 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW--FSSFLLQVENHSSWHRLFVD 815 + + A Y +F P D++ Q+ + + + R+ +D Sbjct: 812 LAANPNADRAHYVD--GMKFEPEVFDVVKGLDPQARQYVVVKNQFKRGDTKRFAARVTLD 869 Query: 816 -----PLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 ++ M S D P+ E + +EG+ HE + K Sbjct: 870 LSGIGRYTKVM-SGDAPNLEIFESIYREGMQPHEWLDTYLAK 910 >UniRef50_B0KAW2 Type IV secretory pathway VirB4 components-like protein n=6 Tax=Thermoanaerobacterales RepID=B0KAW2_THEP3 Length = 594 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 91/591 (15%), Positives = 200/591 (33%), Gaps = 63/591 (10%) Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 +A P + L+ + + ++ + D + N + Sbjct: 37 RVLVIAGYP--------PKVNAAWLSRIAGMPG-VVCSVHIEPSDPTDLINSLNKAIGEY 87 Query: 327 EKKSK-TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 + + A E+ K+ EL +++ Q V + + N + + Sbjct: 88 AGRLEMGGNALTMQRTEQALKDAEELMRKIDQEQQQVFYVTVILMVLAP-NQQELDRRTR 146 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 + + +G F PF K+ + + VA P Sbjct: 147 QVEAALAASGMRGRVLIFRQEEGLKAAGPFCTLPDEVKE----AGARNMPAETVAASFPF 202 Query: 446 VADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 A +G++ L +DI+ RG + TN N + GAGK+ + L+ Sbjct: 203 TASGINDGSGIVLGKDRDGGLVLVDIWKRGGDRTNSNWTILAKPGAGKSFTAKMLLLREY 262 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFAN----ITDIDQSAE------ 552 G ++ D YK +C +GGV+++ G + NP + + D+ Sbjct: 263 MQGSRVIIIDPEREYKEMCRKLGGVWINCTGGEGKINPLQVRLRPVEEEDEENAVFQSPL 322 Query: 553 --RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN-------------RARIDDVV 597 ++ + + +L + + L A+ + + ++ Sbjct: 323 ALHIQTLRTFFSLYLRDLTDTEKAALEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELY 382 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 ++ ++ E+P RL ++ A G + ++ D+ +V ++ Sbjct: 383 EYC-----VKKAEENPETYGRLSVLLKR----AAEGADSYLWAGP-TAVEADSDFIVFDV 432 Query: 658 GGLED-RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 L++ + A F+++ + N + R + + V+DE W L+D + + F+ Sbjct: 433 HDLQNAEDQVKRAQYFNVLSFAWN-ILERDRRERTVLVVDEAWMLVDPQTPQAIAFLRDT 491 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 + R++ G+ I I+QN++DF + + +A N +YK++L Q K+ L Sbjct: 492 SKRIRKYNGSLIVISQNVIDFLAPEVQRYGQALLDNPTYKLLLAQGEKDLEAITTLM--N 549 Query: 777 FLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGP 827 + D++ L ++ P + G Sbjct: 550 LSEAEHDLLVNAKRG------EGLFVAGTQRIHIKIEAAPYEMQYLTGGGN 594 >UniRef50_A8ZR82 Type IV secretory pathway VirB4 component, ATPase TRAC n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=A8ZR82_DEIGD Length = 841 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 130/859 (15%), Positives = 284/859 (33%), Gaps = 77/859 (8%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRT----KLPR 92 + L Y ++ + + G E ++ E L +R +P+ Sbjct: 10 SLTERLQYWG-VRDGVVITRQKGVEVGVEFELPSAAEVTDATREQLAEAIRMIMVQGVPQ 68 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLP 152 I + S + +++ RE S + + + Sbjct: 69 RCRGRIIIESGPVPDEQMLRVQREDHMSNDLLAFLASEDARALEDSRVRGELSSWRYFFT 128 Query: 153 LTL-RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + L R + + + + I + K + L A + + Q ++ Sbjct: 129 VRLDTKRRKTGTPVPFMESELQHLIRRAVQIRKALLNMLNAAGFPARELLGQEACSLIWR 188 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS---TARILN 268 N + P + + N + D ++++D L + + ++ A ++ Sbjct: 189 WHNPGLAASKPPMFK-SMFRPPNVSLADLKKDFRIQSDTLRAQIAASEIDASRIDAMVVG 247 Query: 269 FHLARNPEIAFLWN--MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 L + + + LL ++ L + Q N Sbjct: 248 DRLVQTINMLGPGDSTYPGMTERLLRRLSGHHVYLVIDLNHLY--QHDVRKRLNGAARSA 305 Query: 327 EKKS-KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN--NETALEV 383 + S + + +L + V + +++ +D E E+ Sbjct: 306 TIAATDASLGTPDVANSAVLDNISSVLYQLTQSEEHVFEFGISLVLIARDKDELEQMKEI 365 Query: 384 EQDILNSFRKNGFELISPRFNHMRNFLTCL-PFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + ++ G + ++ +L L P A + + + S NVA++ Sbjct: 366 ARTEMSMLG--GAKSAYGTVQNIPQYLDRLAPMNAQEN--------DFLFQCFSVNVAHM 415 Query: 443 MPLVADNPLT-PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 +PLV + + + L ++ NY + G++G+GKT + Q Sbjct: 416 VPLVGPWRGSNKPIAVFRSRWGSLTGLNP---ADGTLNYGTLIVGSAGSGKTFMTQGWAA 472 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMG----------GVYLDGETLRFNPFANIT---DID 548 G ++ D Y+S ++G G ++DGE +R+N F + D Sbjct: 473 RTGALGAEFIIVDQKRDYESFIASLGEDGQFIPFAPGEFVDGEVVRYNAFELPEGEFEPD 532 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK----------ENRARIDDVVD 598 ++ + +L + + ++ A+ ++A + V Sbjct: 533 ENHKMFLLGFITALLGEEDLGSIEKAIVTAAIEQVYIAAVTRNGQGQVIYTPVTLSKFVR 592 Query: 599 FLKNAS--DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLE 656 LKN + +E + ++ + + + L Y + G + + + + +AK V + Sbjct: 593 TLKNLNAVGTESLRDFEEAQTTIRRLAMSLQTYIGDTPMGTFLDGEST-ICMNAKYVYFD 651 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + + ++ L + +I I +R P +K VI+E L + +F+ Sbjct: 652 IAKIREQQDLTRVALLLIIKQIWDRAKAHPDRVKVA-VIEEIGVLFKIQ--AALDFVATL 708 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 Y+ R + + +TQ I DF + N+S II K SA+E A + Sbjct: 709 YKLGRAYNLWPVGVTQEIADF------QLGKGLINNTSQFIIGKVSAEEAAMIVDVL--G 760 Query: 777 FLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS----WHRLFVDPLSRAMYSSDGPDFEFV 832 +I G K + + FL+ V + R F + + M++S + Sbjct: 761 LNDAAHGLILSLGGEKGR-YREFLVMVNKETGMTGDVVRYFPNKVEYWMFTSAPEEKARR 819 Query: 833 QQKRKE-GLSIHEAVWQLA 850 ++ + G + EAV LA Sbjct: 820 ERTVQAYGGNTLEAVRALA 838 >UniRef50_Q5I721 VirB4 n=1 Tax=Dichelobacter nodosus RepID=Q5I721_DICNO Length = 796 Score = 309 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 121/875 (13%), Positives = 261/875 (29%), Gaps = 124/875 (14%) Query: 33 GEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPR 92 S +PY + + + IN ++ E +D Sbjct: 1 MSKPLRAISDYIPYSSLITPEIIKIQGGSYMMNFRLKGINYIGQAQ-EIIDAR------- 52 Query: 93 GIPLCIHLMSSQLVGDR----------IEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 + I+ QL I G S + F A Y + + Sbjct: 53 --VIQINNFIEQLRAPYRYNLYLQTHCIRAGSGASLPSAFATDSFAAAFNHAYEQKIIYE 110 Query: 143 FPLPEGMNLPLTLRHYRV-------FISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 P+ + V F S + ++ + N+ + + + I Sbjct: 111 QPIIATDYYISVIYRPYVRIGGFSAFKSTRAEIIALAKQAEETLNNIKEAVLSYFDDYDI 170 Query: 196 TTQTVDAQ------AFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 + + + + + N N +++ +R Q+ Y + ++ +K+ + Sbjct: 171 ELLSCYEKDGVLFSEQLRFLNYLCNLNQNAVPVQRAQISEYLPTATISIGNNEYIKIENN 230 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 +T + A PE + +L L + +T T Sbjct: 231 GIT-----------RYGVIMTFAEYPEETS--------TGMLQKFLEMPWQMTVTQTFAP 271 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNI 369 D+ + +Y L+ S E + ++ E Q + + Q + ++ ++ Sbjct: 272 IDKAEARDWLTREYNRLQNTDSGS--------ETDLQDLYEANQAVSADQFLLGDFYWSV 323 Query: 370 TAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAG 429 D+ E + GF + + ++ LP K Sbjct: 324 MLID-DSPEKLKRKLSEADAILSSAGFRASVNKIAKVDSYFAQLPANIALQPRK------ 376 Query: 430 VVQRAESFNVANLMPLVADNPLTPAG-------LLAPTYRNQLAFIDIFFRGMNNT---- 478 + S N A +MP N G + T+ ++ + + ++ Sbjct: 377 --AKLSSANCAQMMPFQKQNHGKRLGNAWGAAVAMLRTHNEEVYYFNFHDPEKGDSTGKD 434 Query: 479 -NYNMAVCGTSGAGKTGLIQPLIRSVLDS--GGFAVVFDMGDGYKSLCENMGGVYLD--- 532 N + G +G GKT L+ L+ V+FD G MGG Y Sbjct: 435 IAGNTFISGATGTGKTVLVSFLLAQSQRYAHPPKIVMFDKDLGSSVFVRAMGGKYSQIKL 494 Query: 533 GETLRFNPFANITDIDQSAERVRDQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAKEN-R 590 GE FNPF ++ + + + + M S + + + A+ + + Sbjct: 495 GEPTGFNPF-HLKNTATNRTFIAQLIKSMLHSDQNPITAEQDTQIESAIMQVMSSSDQSL 553 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 I+ + L + D + L ++T G Y FN+ E + + Sbjct: 554 MDIEAFANLLPSGDD---------------SIQSRLKKWTC-GQYAWVFNNREDNFSTNE 597 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVG 710 ++ ++ D + ++ L I+ + + +DE W+ L K+ Sbjct: 598 HILGIDYTQFLDNEEIRTPILMYLFHRIQEML----DGTPLIITLDEAWKPL--KDPMFQ 651 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN 770 ++E RT R+ G + +Q+ D + A + I L Y Sbjct: 652 AYLEDKQRTIRKERGLLVFASQSPADAYL----GLSHAFLEQIATHIFLPNPRATRDVY- 706 Query: 771 QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL-SRAMYSSDGPDF 829 + + ++I G FL++ + ++ +L + + + S Sbjct: 707 -VEHLGLEEEEFELIKNLGK----HSREFLVKHQAATAHCKLSLSGIKEVEVMSGSASKS 761 Query: 830 EFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAW 864 +E + + Q + + + Sbjct: 762 ALADSLIQEYGD--DWLNQYYVALANKKDQIINQI 794 >UniRef50_A9EBC2 CagE, TrbE, VirB component of type IV transporter system n=12 Tax=Rhodobacterales RepID=A9EBC2_9RHOB Length = 797 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 115/830 (13%), Positives = 247/830 (29%), Gaps = 86/830 (10%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGF 64 +EA A+++ L + + LPY + + + + + Sbjct: 1 MEATALALDA--GTLSTHGTALLQAGGGEFARESYLADHLPYFALADDDVMVLREGDLMA 58 Query: 65 MLEAIPIN--GANESIVEALDHMLRTKLPR-GIPLCIHLMSSQLVGDRIEYGLREFSWSG 121 L +N + ++ ++AL + + + G ++ + D + S++ Sbjct: 59 TLRLDGLNPMTSEDARLDALKRAVAAIVAQTGNAFGFYIHRISVPQDLGMRPIEGDSFAA 118 Query: 122 EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMEN 181 R+ A + ++ A Q L ++ R + K + E+ Sbjct: 119 AIDARWQAHVKD--LRPAKRQLYLSVIRRPDISARIPFLRTLARKAWVKDRATRLQELNE 176 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDS 241 ++ +L A+ T ++ + + + + + L Sbjct: 177 VMGFFEVALSSANPVRLTRTGGEWLGYLNTLNAGSFSPIAFGQSAL--------PLSHIL 228 Query: 242 FDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPF 301 + + D + L + F + P + + + L Sbjct: 229 SNCRATFDGDVVTLTDAVTGRVKYGALFSMKTYPALTDVTLLDALDLPLD---------I 279 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 +LT + ++ + + ++ G+ +G+ + Sbjct: 280 VLTNSFSPIPNNIMAERIQRIIRQMQASDDAAVSL--------REQLGQAADDQEAGRIA 331 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + L+I + D +T I ++ ++ + P G Sbjct: 332 FGDHHLSIAVYAPDR-DTLERAAAQIKRVGQEIMSVIVRENMALKATYFAQSPGNFGYRA 390 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVAD--------NPLTPAGLLAPTYRNQLAFIDIFFR 473 K S N A+ L +P + PT + Sbjct: 391 RK--------TPISSINFADFAALHGSVEGRGPDQSPWGQTISVLPTVGTSGYRFNFHEA 442 Query: 474 GMNN---TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 G T + V G +G GKT L G FD G + +GG Y Sbjct: 443 GAPGKEPTVGHTLVLGRTGTGKTLTTAFLAAQAQRVGARLFFFDKDRGLEMAVRALGGRY 502 Query: 531 LD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 + G NP A TD ++ + D L+ + + NG L + AV + A Sbjct: 503 NEIRAGVPTGLNPLATETD-ERGRAWLSDWLATLLTRNGTLSGEQSRHIQSAVGQNADAG 561 Query: 588 ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE--PS 645 R ++ D E+ + ++ G YG F+ E Sbjct: 562 AALQRFASFETLFQSLDDD-------------GELQSRVAEWAPGGRYGWVFDEPERGAG 608 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 L+ +V ++ + D + +AV+ + IE + + V+DE W+LLD Sbjct: 609 LKLTGDIVGFDMTEILDMTTERMAVLSYIFRQIERVV---EDRRPTIIVLDEAWKLLD-- 663 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 + G +E T R+ I +TQ + S + +I+ Sbjct: 664 DPYFGARLENWLVTLRKMNCVVIMMTQYPSQL---RDSRVGKTIVETVPTQILFPNDRAT 720 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 + Y+ L + + ++ + + L++ S + + Sbjct: 721 VSDYDFL---RVNAKEAALLVQPTIGQRI----ALIRSAGDSVFVDADLS 763 >UniRef50_C3WQ25 Conjugal transfer protein trbe n=3 Tax=Fusobacterium RepID=C3WQ25_9FUSO Length = 824 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 110/879 (12%), Positives = 267/879 (30%), Gaps = 145/879 (16%) Query: 31 VLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM---GFMLEAIPINGANESIVEALDHMLR 87 + + S +P+ E G+ +N ++ A ++ + L Sbjct: 3 KEYQDDKNKLSTYVPWIAMIDE-GIILNKNGTFQKTLRFRGYDLDSATIFELQNSNGRLN 61 Query: 88 TKLPR-GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKA--AATQFP 144 L R +H+ + ++ E + + R + +++ Sbjct: 62 NVLTRLEGGWTLHIEARRVHSKEYESI----DIKNFTLKLIDEERRNKFQSGTYFESEYY 117 Query: 145 LPEGMNLPL-TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ 203 L P+ T + + F + + + + + I+ + + + ++ + Sbjct: 118 LTLTYLTPMDTEKKLKNFFIEEEKTAENIDKSLENFKKEYREIKELFKDLFLEVEELNKE 177 Query: 204 AFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST 263 + + I+ + + + L + K+ ++ Sbjct: 178 ETYEYLHSCISIKNHKVVVPEVPMYISNYLCDSDMVGGLKPKLGNKHM------------ 225 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 L P + + + + + + + S+ K+ Sbjct: 226 ---RCISLQGFPNF--------TVPCMFDELNRLGFEYRWVTRFMFLSKQEALSKLEKKW 274 Query: 324 MDLEKKSKTSYAKWFPSV----------EKEAKEWGELRQRLGSGQSSV---VSYFLNIT 370 + + + E ++ E+ +L ++ + Y I Sbjct: 275 KATFSGRISMLKRVKMELTGEKEPTKIDEDALEKADEINTQLNLTRADILSQGFYSCAII 334 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 + + E + I N+ K GF I+ N + FL +P + + Sbjct: 335 IY-GNTIEDVDDKALKIENTINKLGFITINETVNCVETFLGAIPGNIYNNVRTPILN--- 390 Query: 431 VQRAESFNVANLMPLVADNPLT--------PAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 + ++ +L+P + P + T + ++ + + Sbjct: 391 -----TISLCHLLPTSSVWAGDKWNKELNMPPLVYTQTNGSTAFRFNLHVGDI----AHT 441 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG--ETLRFN 539 + G +GAGK+ + + +FD G + L +G + D + L F Sbjct: 442 CIIGPTGAGKSTALGLINAQYKKYPNSQVFIFDKGGSARILTYAIGETFFDLGVDNLTFQ 501 Query: 540 PFANIT----DIDQSAERVR-----------------------------------DQLSV 560 P I ++D+ +++R L + Sbjct: 502 PLRGIGILKNNLDEDEKKIRSLKEKNGEVFSELDKQKILNKEKERAYRELEWANEWVLEI 561 Query: 561 MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 A N L++V + + QA+ ++E I ++ L + Sbjct: 562 FAQENIELNQVQKTKIWQALELLATSEEKFRTISNLRTSLND-----------------R 604 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIEN 680 E+ L++YT G G++F+SDE + + V E+ + + S + ++ L +E Sbjct: 605 ELKDTLEKYTIKGALGRFFDSDEENFSF-SDWQVFEMEKIMNVKSAVTPLLSYLFHKVEE 663 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 ++ + V+DE W F N + I + + R+ I TQ + D + Sbjct: 664 KLTGA----PSIIVLDECWLF--FDNEQFANKIREWLKVLRKKNTGVIFATQELGDIMN- 716 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDMIGKFGAAKDQWFSSF 799 S KI L + Y+ +Y + +I + KD ++ Sbjct: 717 --SKLFTTILDACLTKIFLPNANALADNYSVIYKKFGLNSKEIQIISEATPKKDYYY--- 771 Query: 800 LLQVENHSSWHRLFVDPLSRAMY-SSDGPDFEFVQQKRK 837 + S L + + + ++D + ++ + Sbjct: 772 --KSPKGSRLFELVLGQNTLKLVGANDPEVQKEAKELYE 808 >UniRef50_A9I2D7 Type IV secretion system protein VirB4 n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2D7_BORPD Length = 814 Score = 308 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 125/852 (14%), Positives = 243/852 (28%), Gaps = 101/852 (11%) Query: 34 EMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAI---PINGANESI---VEALDHMLR 87 + + SR LPY + + + ++ +++ P A + + +EAL ++LR Sbjct: 8 AVDERRVSRYLPYSHHVTDQIIACDNHEYLAVIKVTGRAPDAYAQDELKDWIEALHNVLR 67 Query: 88 TKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE 147 LP G + + V + + + S A + M L Sbjct: 68 -GLPMGSLGLYSHIVRRRVTEYPDSTFNQPFASRFDAAYRATFDASGLMINDLYLTVLIH 126 Query: 148 GMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA----- 202 + P+ + + I + +++ + A L QT+ Sbjct: 127 PVQDPILGTFASLEKADAQHIAHWQAESIERLNGIIRALSAGL--YRYDPQTLGIVDRKG 184 Query: 203 ---QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENG 259 + +G +++ + R +L +L Sbjct: 185 FAFSEAAEFLGFLLSGTHRPVPISRERLRDTLPYARPIFGRHGEL----------GELRT 234 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 S+ L PE + L+ L + F+LT + Sbjct: 235 VASSRIFGMMELRDYPEATKPGH--------LDRLLGLPHEFVLTQSWGSHTGAAAKKLV 286 Query: 320 NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 + L S + + E L S + + + + + D E Sbjct: 287 KKHHKLLVDSGDDSI--------SQVTQLTEAMDDLTSARLGLGDHHATMLIY-GDTAEG 337 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 + + + F LP S N Sbjct: 338 VRQALAQTATALAEEAVGFRPLDRALEAGFWAQLPGNWHW--------RPRPVPITSLNF 389 Query: 440 ANLMPLVAD-------NPLTPAGLLAPTYRNQLAFIDIF------FRGMNNTNYNMAVCG 486 L NP PA L T F + N + G Sbjct: 390 LCFSSLHNQLTGKPVGNPWGPAVTLLKTQTGSPFFFNFHASTEDLDETGKRRPGNTMIIG 449 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN 543 +G GKT L L+ G VV+D G + L +GG Y + GE +NPF Sbjct: 450 MTGTGKTVLQGMLLTQAQKFGATCVVWDKDQGMQVLIMALGGRYFNIRLGEATGWNPFQM 509 Query: 544 ITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRAS-WLAKENRARIDDVVDFLKN 602 A VR + + + + + QAV+ L + + L N Sbjct: 510 EPTKGNVAFMVRLVVFLAERRGEAVTTRQQADITQAVQQLTTLIDREARTLSTLNTLLPN 569 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK-----MVVLEL 657 + + L + +G YG F++ L + +L Sbjct: 570 P---------YSDDETTSTIHARLAPWCQSGEYGWVFDNPADELSLATDTGKPAIFGFDL 620 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 L D ++ A L ++R+ + +N+ DE L ++ E ++ Sbjct: 621 TELLDDGAVRGAATMYL----KHRIDALHDGRRIINLYDECQHPLKDRH--FQEDMQDAS 674 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 RT R+ G TQ + + ++ I+L + Y + + Sbjct: 675 RTIRKKNGVLAFATQEPGAITEN---PVGPSLVQQTATLILLPNPRAKARDYIEGF--GL 729 Query: 778 LPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQK 835 P + +++ G A + FL++ + + +L + ++S +Q Sbjct: 730 SPTEFELLKSLGEASRK----FLVKQGSSVTVAQLDLSGCEDELLVFSGSSDMAAIAEQA 785 Query: 836 RKE-GLSIHEAV 846 + G + Sbjct: 786 VAQAGHDPVAWL 797 >UniRef50_B0ZDY6 Pilx3-4 protein n=16 Tax=Enterobacteriaceae RepID=B0ZDY6_ECOLX Length = 917 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 117/882 (13%), Positives = 253/882 (28%), Gaps = 128/882 (14%) Query: 29 NEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING--ANESIVEALDHML 86 + + L+PY + ++ + + + + + + L L Sbjct: 102 DNFMKLKDQSSVEELIPYSSHITDNIIVTKNRDLLATWQIDGAYFECVDSEDLSILTDQL 161 Query: 87 RTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLP 146 T + + L RI + N + YY ++F Sbjct: 162 NTLIRSFEGKSVTLYP-----HRIRCKKDVRPVFNSKIPFVNRVMNDYYESFPQSEFF-E 215 Query: 147 EGMNLPLTLRHYRV------FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTV 200 + L + + + F S K + + EM + + L ++ + Sbjct: 216 NKLFLTICFKPFTTEDKVTHFFSRSKKQKDIFKEPVNEMNEICDRLNTYLS--RFHSRRL 273 Query: 201 DAQA--------FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + + +++ + Y + +D+ Sbjct: 274 GLYEDHGVVYSDQLSLFQYLLSGRWQKVRVSSSPFYTYLGGKDLFFGNDAGQITASDH-- 331 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + + + +L+ + + +++T + D+ Sbjct: 332 ----------ARYFRCIEIKDY--------FQETDAGILDALMYLPVEYVVTSSFTAMDK 373 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 + + LE + + + + SG S + F Sbjct: 374 QSAIKALDDQIDKLEMTDD--------AAKSLLADLKVGLDMVSSGYISFGKSHQTLVVF 425 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 D+ E ++ + ++ G + + + LP + Sbjct: 426 A-DSPERLVKDTNIVTSTLEDLGLIVTYSTLSLGAAYFAQLPGN--------YTLRPRLS 476 Query: 433 RAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFR-------GMNNT 478 S N A + N + N + ++ G N T Sbjct: 477 TLSSLNFAEMESFHNFFSGKEKGNTWGEKLITLRGSGNDIYHLNYHMTTEHQNFFGKNPT 536 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGF-------------AVVFDMGDGYKSLCEN 525 + + GTS GKT L+ + G V FD + Sbjct: 537 LGHTEILGTSNVGKTVLLMTKAFAAQQFGTPESFPANRKLKKLTTVFFDKDRAGEVGIRA 596 Query: 526 MGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVMASPN-GNLDEVHEGLLLQAVR 581 MGG Y +GE +NP A + ++ ++D + ++ + N LD+ L+ AV Sbjct: 597 MGGSYYRVKEGEPTGWNP-AALPPTKRNIAFMKDLVRLLCTLNSEPLDDYQNSLISDAVE 655 Query: 582 ASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 + I + ++ D+E + L +T +G F++ Sbjct: 656 RLMQRSDRSYPISKLRPLIQEPDDTETKRHG---------LKARLKPWTQGEEFGWVFDN 706 Query: 642 DEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 E + D + ++ D L A F LI + + L +DE W+ Sbjct: 707 REDTFDVDNLDVFGIDGTEFLDNKVLASAASFYLIYRVTMLA----DGRRLLIYMDEFWQ 762 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 ++ N +F+ +T R+ + TQ+ + S A A + I L Sbjct: 763 WIN--NEAFRDFVYNKLKTGRKLDMVLVVATQSPDELIK---SPIAAAVREQCATHIYLA 817 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL--------QVENHSSWHRL 812 + ++Y Q L D I FL+ + ++ +++ RL Sbjct: 818 NPKAKRSEYVD--GLQVRELYFDKIKAIDP----LSRQFLVVKNPQRKGESDDFAAFARL 871 Query: 813 FVDPLSRAM--YSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 + + + S+ P E + KEG+ E + + Sbjct: 872 ELGKAAYYLPVLSASKPQLELFDEIWKEGMKPEEWLDTYLEQ 913 >UniRef50_D0SZZ9 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZZ9_ACILW Length = 829 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 116/849 (13%), Positives = 269/849 (31%), Gaps = 110/849 (12%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKLPRGIPLC 97 LL + + D ++ G+ A I+ A+ + + L R Sbjct: 14 LPDLLNFASVINPGVVIGKDGSLMAGYYYRADDISSASFEERNYITARVNAALSRFGDGW 73 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 + + + D + + + + R + K + Sbjct: 74 VTWHDAARITDNYYPNNEDNFFPDPISRLIDQQRRLKFQKEGNH------------FVTE 121 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP 217 Y + ISY P+K S+ + E+ + + + + + F D++ + Sbjct: 122 YVLVISYLPPNKTSSKLSSMVWEDSQESEKKNSEEIILDYFEKQLSIFEDLIANAVQLQR 181 Query: 218 DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA--RNP 275 + Y + + + V ++L + +G + N L P Sbjct: 182 MNSYTYTDDF--GKTHTRDQLVNYLEFCVTGNFLEKNIPPHGAYLDTFVGNHLLVTGDTP 239 Query: 276 EI--------AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLE 327 +I ++Y N+L ++ + + ++ D E Sbjct: 240 KIDDNFMCLVTIEGYPPESYPNILAVLETLPLVYRWSNRMIYLDHQTAIKELRSVEKKWR 299 Query: 328 KKSKTSYA-------KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 +K + + K A+ + SG S + + F K N + Sbjct: 300 QKVRGFISQTLKMEGKINHDALDMAEHASAAVRDAESGLVSYGYFTSTVVIFGK-NLKNL 358 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 E + ++ ++ GF N + +++ +P A + + L + N A Sbjct: 359 HEDARAVVREIQRLGFTCRIENINSLESWIGTIPGHADANIRRPL--------IHTLNQA 410 Query: 441 NLMPLVADNPL------------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTS 488 +L+PL + +P L T +++ + + + G + Sbjct: 411 DLIPLSSVWAGRPENPCPYFPPNSPPLLYGATSGATPFRLNLHIDDV----GHTLIIGPT 466 Query: 489 GAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG-------ETLRFNP 540 G+GK+ L+ L L FD G+ + GG++ D + LRF P Sbjct: 467 GSGKSVLLNTLAVQFLRYPNARVFAFDKGNSMWATSLACGGIHYDIGGDLGDAKDLRFAP 526 Query: 541 FANITDIDQSAERVRDQLSVM--ASPNGNLDEVHEGLLLQAVRASWLAK-ENRARIDDVV 597 I D D D LS L +L +A+ + + + + + + Sbjct: 527 LQYI-DSDSDFAWALDWLSTCYELQAKKPLTPAQRQMLTKALASFRDSTVVGQRGLVEFI 585 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK-MVVLE 656 ++ ++ LD Y + G + E +L +A V E Sbjct: 586 SEIQEV-----------------DIRSALDPYAST-AAGGILSGIEDNLNVNAGWWTVFE 627 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + L + + + +++Y+ R+ ++ + +DE W +L + I + Sbjct: 628 IENLMEMGEVN---LLPVLLYLFRRIEKSLDGRPTILSLDEAWLMLGH--PTFRDKIREW 682 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ----- 771 + R+ + + TQ++ D + S N KI+L + + ++ Sbjct: 683 LKVLRKANCSVVMATQSLTDALN---SGIFDVLVENCLTKILLPNAEADKEGTDKVPGPL 739 Query: 772 --LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSD-GPD 828 ++ ++I +D ++ L +D ++ A +++ + Sbjct: 740 DLYKAIGLNDVEINIIKNSTRKRDYYY-----LSSEGKRLFTLSLDDIALAFVAANYKDN 794 Query: 829 FEFVQQKRK 837 + +++ Sbjct: 795 NKEMRELMA 803 >UniRef50_C8S1Y9 CagE TrbE VirB component of type IV transporter system n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Y9_9RHOB Length = 780 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 111/789 (14%), Positives = 227/789 (28%), Gaps = 73/789 (9%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING--ANESIVEALDHMLRTKLPRGIP 95 P+ LPY + + D + LE I+G + S + AL L Sbjct: 20 PKIYAHLPYVIELDDEVVRTRDNGLMISLEVTGIDGITSGSSAITALRAGFAHLLDTLDE 79 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 +++ S + L L Sbjct: 80 -RFSFYLHRMMRPANAQLKPIHGQSFAADIDRAWSGELQRRNLQESVLILTVVRRQVAPL 138 Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA--FIDIVGEMI 213 + + + + E+ +V I+ L + + + + I ++ Sbjct: 139 AVPLFGKAAAKVWGEDTDRRLEELREVVSILETGL---GVKSHRLKIREGSLIGFYASLL 195 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLAR 273 + + ++ TL E G ++ ++ Sbjct: 196 TGELRNKPRSAFGIIAED-------ASDAAIRFGKGQFTL---EEGADTPRVGAVLYVKS 245 Query: 274 NPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTS 333 + + L S I+T + ++ + + + Sbjct: 246 YATSTWPGML---------DALGASRDTIITHSYTPIERGSITERVKRRVAQMR-----A 291 Query: 334 YAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRK 393 ++E + E + SG+ + + IT F D I + Sbjct: 292 SEDIAATIEAQ---LFEAADKSESGELGFGIHQMTITVFAGDQA-ALDTEVARIRGIAHQ 347 Query: 394 NGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP 453 NG L+ F P + + + A+ + P Sbjct: 348 NGMRLVREVTALEAAFFAMHPGNMDYRARDMTVSSLNFADMAALHAADTGTEASRLPWQT 407 Query: 454 AGLLAPTYRNQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 L T + L G TN + V G SG GKT + L +GG Sbjct: 408 PLTLFQTLQGSLHRFSFHEPGDPLAEPTNGHTLVLGKSGGGKTTTVAFLAAQAQRAGGRT 467 Query: 511 VVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN 567 ++FD G K +GG Y + G NP A + A + ++++ +G Sbjct: 468 IIFDKEAGLKMAVRALGGRYAEIRAGRPTGLNPLATESGERGEAWFLDWLVALLEQRSGP 527 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 + + L A+ + A+E + + D ++ + Sbjct: 528 MTPLQSEALKSAISQNGKAREGLRNFRAFQELFGDVGDGL-------------DLAQRIS 574 Query: 628 QYTANGTYGQYF-NSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT 685 ++ G YG F + EP + + + ++L + D + A++ L IE + Sbjct: 575 EWGPEGRYGWVFGEASEPVVDFTSHDVTAVDLTEILDLGTERTAILGYLFRRIEMLI--- 631 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 L +IDE W++LD + + + + TAR+ + +TQ S Sbjct: 632 EEKRPTLILIDEAWKVLD--DEYFAKKLAEWLVTARKKNVVVVMMTQFPSQI----RGSK 685 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 AR+ +++ A Y+ + + D + + L + Sbjct: 686 ARSILEALPNQLLFPNGEAASADYD---GFRLTDGELDFVLSPIPGQ----RMVLSRTPR 738 Query: 806 HSSWHRLFV 814 S+ + + Sbjct: 739 SSTVLNVDL 747 >UniRef50_C9M9C2 Ribosome recycling factor n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9C2_9BACT Length = 885 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 124/900 (13%), Positives = 267/900 (29%), Gaps = 139/900 (15%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLR---TKLPRGI 94 F+ LL Y + + + + G+ ++ + + + +E + + L Sbjct: 9 FADLLQYSHLVTPNVMALKNGGYLAGYFVQGPDLESSTHAELEYISERMSAAINSLTLRW 68 Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY---MKAAATQFPLPEGMNL 151 + + +S A + RA + + L Sbjct: 69 SIHFEFFRRPAMD------YPSGKFSEATAALIDQERRAQFSLETEHFENIQCLFVTYVP 122 Query: 152 PLTLRHYRVFISYCS---------PSKKKSRADILEMENLVKIIRASLQ------GASIT 196 P + + P + + E ++K S+ Sbjct: 123 PRLESNAVARQAQKIVLGDDEADAPLEHVVDRQLARFEEVLKGFSDSISLALKPRRMGFI 182 Query: 197 TQTVDAQ-------AFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 D + ++ V +N + L C+ Sbjct: 183 PDNQDGELTYSGRSELLEAVNAAVNGVWQPVKVPAFPYYLDVLLAKDCINGLAT------ 236 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 + + L P + +L + + ++ Sbjct: 237 ----------EENNQLVQTVSLMNYPS--------GTFPGILKDLQLLPVAMRWSNRFIL 278 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWF-PSVEKEAKEWGELRQRL-------GSGQSS 361 D T + + K +K ++ +A+ K ++ ++ + SG Sbjct: 279 SDMRDTLGQMDAKRRQWSQKIRSLFAQITGVQTTKVNQDAVQMVADVDDAIAAAHSGDVV 338 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 ++ + D E ++++ F + G + + N++ FL LP + + + Sbjct: 339 YGNHTSTVVLRHAD-KEILDAAAREVVKIFERAGCQAKIEKMNNLEAFLGSLPGHSRENV 397 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNP------------LTPAGLLAPTYRNQLAFID 469 + L S N+A+++PL D +PA + A + ++ Sbjct: 398 RQPL--------ITSLNLADILPLSCDWVGETTCPCPFYPAGSPALIQAASQGATPFALN 449 Query: 470 IFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV-LDSGGFAVVFDMGDGYKSLCENM-G 527 + + + + G +G+GK+ L+ + VFD G L ++ Sbjct: 450 LHVGDV----GHTLILGPTGSGKSTLLATIAAQFNRYQDSQVFVFDNGRSIYPLAQSFRH 505 Query: 528 GVYLD----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRA 582 V+ D + + P A I D + S++ + LL++A+ Sbjct: 506 SVFYDLARGEQDISLCPLAEIDQPDVRDWALEWLESLIEMVEPGVVTPARRALLIEAMNN 565 Query: 583 SWLAKEN--RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 + + + L++ + + L Y+ + G + Sbjct: 566 LAESTSEASERTLTAFITSLQD-----------------ERLKDALSFYSLDQNGGYLLD 608 Query: 641 SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWR 700 D + + V E+ L DR + AV+ L I+ R+ L +IDE W Sbjct: 609 GDHDDITY-SPFSVFEISALLDRDKIAPAVLSYLFFQIQRRLT----GKPSLLIIDEAWT 663 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 L + + I +T R+ A I TQ+I D + S A + + KI+L Sbjct: 664 ALR--DEQFSAKIRAWLKTFRKLNCAVILATQSITDVVN---SPIRDAVFESCPTKILLA 718 Query: 761 QSAKEFAKYNQLYPD--QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 + ++ Y + Q Q D+I ++ ++ L + ++ Sbjct: 719 NPDAKSPAMSECYRNYLQLNTRQVDLIAHMVRKREYYY-----ISPKGRRLFGLGLGKVA 773 Query: 819 RAMY-SSDGPDFEFVQQKRKE-GLSIH-EAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 + +S D V+ KE G + + A L E E A Sbjct: 774 LSFVGASGADDLAEVKSLSKEFGPDWPGQWLRIRRLDHWADRWAKLNREYNEKEGTEDSA 833 >UniRef50_A4XMV0 AAA ATPase n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMV0_CALS8 Length = 590 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 90/588 (15%), Positives = 201/588 (34%), Gaps = 58/588 (9%) Query: 238 VEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA-RNPEIAFLWNMADNYSNLLNPELS 296 + D + + L P ++ + L Sbjct: 4 FAPDIYELILPDTFHEEADYIYLGAENYCRVYVLDIDYPSEMYV--------GFFDSLLD 55 Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLG 356 +++ + D + + + +++ + + + + + + LR L Sbjct: 56 -KGEIAISVFIEPRDTGQAIRDITRRINEMKSNAMLQRGEPDYKLLAQIEWYDALRASLQ 114 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 G ++ + I + K + E E I G + F + +++CLP Sbjct: 115 RGIEKILMAQVFIVVYSK-SLEQLRENCIRITKFAESLGLNMRCLSFEQAKGYISCLPLG 173 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRG 474 A + LK + + A L P+ + G N F + F R Sbjct: 174 A-----RNLKYIEKFRLMTTSATACLFPVGNTDITYEEGFYIGYNAITNSPVFYNQFDR- 227 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD-- 532 + N +MA+ GT+GAGK+ ++ ++ + G V D Y+ + +GG Y+ Sbjct: 228 -SLPNPHMAIFGTTGAGKSTTMKTMLGRMAAYGYNICVLDPEREYEKIINKLGGKYIRIR 286 Query: 533 -GETLRFNPFAN---------ITDIDQSAERVRDQLSVMASPN--GNLDEVHEGLLLQAV 580 GE L NPF D++ +R L++++ LD V ++ + V Sbjct: 287 PGEKLGINPFDVEIEEEEGKRFIDLNSKVADIRFILNIISEYYVGRRLDGVQMAIIERIV 346 Query: 581 RASWLAKENRARIDDVV--------------DFLKNASDSEQYAESPTIRSRLDEMIVLL 626 R + K + + + K + E S + + Sbjct: 347 RKLYYDKGITSDPESLYTSARTDEKGRLIVGKIKKELPTLSELREELFKESETQALAKAM 406 Query: 627 DQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP 686 + + G+ + + ++ D K++ +L E L +++ +I N+ Sbjct: 407 EVFVGEGSLSLFDC--QTTIDADDKIIAFDLKEFERDNFLKFFASVNILSWIWNKFSNAK 464 Query: 687 -RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 + KK+ + DE W ++ E++E R R++ + + +Q +++F + Sbjct: 465 LKGQKKVVIFDEAWMFTRYQ--ASAEYLEFISRKGRKYKISLMIASQTLLEFLQN---DT 519 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 RA + KI+++Q + A+ + + ++I + Sbjct: 520 GRAIINMCASKILMRQESDMAAQIAEFFR--LSERTVEIITSAAQGQG 565 >UniRef50_Q2SSU5 Membrane bound ATPase, putative n=1 Tax=Mycoplasma capricolum subsp. capricolum ATCC 27343 RepID=Q2SSU5_MYCCT Length = 955 Score = 303 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 141/810 (17%), Positives = 282/810 (34%), Gaps = 74/810 (9%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGI--- 94 + + LP + + L T E G + SI+E D L+ KL Sbjct: 93 EEIANELPIKK-IEVDFLISKQNTKNVAFEVN---GIDLSILEDKDVELKIKLYEQFLKS 148 Query: 95 ---PLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNL 151 + + QL D+ E L + + AE+ + + L Sbjct: 149 LDVEVYQIKIDKQLQLDKYEQWLTQHQQGTKNAEKIKQLDD---------YINQIKEKEL 199 Query: 152 PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE 211 + Y VF S D ++N +K ++ +T + ++ FI+++ + Sbjct: 200 EYNSKFYLVF----------SSKDNQSLQNAIKNLKIFFSKIELTYKQLENFEFINLLKD 249 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 M + ++ + +++Y D+ LK++ +Y+ E + + L + Sbjct: 250 MYFDFDKDDFTQQDIKEHIDNIDYLLSYDN--LKIKNNYMIFANNEYETYISCKTLKEYA 307 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 + P+I++ ++++ +++ + + + + AN+K +K +K Sbjct: 308 SS-PDISWFFDISTERGTVVSRISPL----------KQQQINRMVNNANIKARVNQKLNK 356 Query: 332 TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 + E EL L G + +F D+ E E +I Sbjct: 357 QVKLTDVITEEANIDSIQELAANLKLGNEKLFLISTTFISF-GDSLSDLKENENNIKLEL 415 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL 451 N F L + F F+ P K + Q S+ +AN P V +N Sbjct: 416 SNNDFVLSNQSFKQFETFINSFPLGLASN-----KNIVLKQEISSWALANSFPFVDNNWT 470 Query: 452 TPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA 510 +G+ T ID F R N N N V G SG+GK+ ++ L+ +G Sbjct: 471 DISGIYFGDTLNYSPFIIDFFKRKSNVLNCNATVIGASGSGKSVTMKKLVNFNCVAGIKT 530 Query: 511 VVFDMGD-GYKSLCENMGGVYLD---GETLRFNPFANITDIDQSA----ERVRDQLSVMA 562 ++FD + L + G ++ G + NP +++ + + L V+ Sbjct: 531 IIFDPERTEFLPLIKKWNGQIINVALGNKTKINPLEIFKNVENDNLNINSIISNHLQVLE 590 Query: 563 SPNGNLDEVHEGLLLQA----VRASWL--AKENRARIDDVVDFLKNASDSEQY--AESPT 614 NL E ++L+A ++ + N+ D D + Y E Sbjct: 591 EWFSNLFSNLEEIVLEAFLISIQNCYKNSKFYNKPIKDWTSQDFPTFDDLKPYVLDEVSK 650 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS--LLVAVMF 672 +SRL + +++ + NG Y +N ++ +++ + + A Sbjct: 651 AQSRLIRLEYIINNFVGNGKYANLWNG-YTNIDLTNDLILFDFADFGSGGQNTRIKAAQL 709 Query: 673 SLIIYIENRMYRTPR---NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 SL++ I + + ++DE + N + R R+ G++I Sbjct: 710 SLLVKIVDNIIWNNDLTIRQPIQIIVDEAHTFISSDNTYALNMMSTFARRIRKRNGSFIL 769 Query: 730 ITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 TQNI DF A AR N+ + I K ++ + LY +F + + Sbjct: 770 ATQNISDFVKPGAIKDARDIINNTQFSFIGKLMPQDLKDLDTLYS-KFNGFTENEMTNIR 828 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSR 819 + F + + + + L + Sbjct: 829 TQEVGNF--LFINGGIEKIFFKTNISDLEK 856 >UniRef50_A5IEK6 Type IV secretory protein VirB4 component n=7 Tax=Legionella RepID=A5IEK6_LEGPC Length = 924 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 144/942 (15%), Positives = 294/942 (31%), Gaps = 113/942 (11%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLF-MNDT-TM 62 ++ +Q + L+ P + + + E P F+ L D+N E LF +ND ++ Sbjct: 1 MKLFSQVSDWLLGQPNKPALTQQNIKKRFENHNPSFANQLSMVDFNDELNLFLLNDGVSI 60 Query: 63 GFMLEAIPINGANESIVEALDHMLRT---------KLPRGIPLCIHLMSS---------Q 104 G E I A + E L + L + P + + + Sbjct: 61 GSGFELASIP-AEATSTEHLHAVFSKIRDTFATVVPLHKEDPWVMQMYVNDEYSLKPVLT 119 Query: 105 LVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISY 164 + I + E S+S + R + + P + R +F Sbjct: 120 HIQQSIAPDIAETSFSRDYLARLDDLFCKMTRPEGLFVDPKTDAPYRGRRRRIRVLFYRL 179 Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 ++ + E + ++ I + L + + + + + + NP+ L + Sbjct: 180 YQKTQTTRELALAEHQEVMAQIESKLLSPGLQLKQLTGKDYYQWLVRWFAANPEELLARF 239 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLW--N 282 Y ++ + ++D + L PEI L Sbjct: 240 PYPKDKKPAGYTLSQNILFHEPQSDEHGF---IFDEMIHRILYIDGLKEAPEIGLLSREK 296 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 N + + T+ +V E+ + + LEK + K Sbjct: 297 PQANPKHRYALLDKLPEDATYTIQVVFENDEA----LDAHLLRLEKGIVGTSLKP----S 348 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELIS-- 400 + ++ R L G + +I + + A+ +E+++ F + LIS Sbjct: 349 QVREDIKTARDELSIGN-RLFWVNQSIF-YRASTKDQAVRIEKELKELFIEAKMPLISSG 406 Query: 401 PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP--AGLLA 458 + + ++L LPF +Q + + +A+L+P+ N Sbjct: 407 FDIHPINSYLNALPFNFIPQYARQYLRFDRL--MYASELASLLPVYGRNQGARHLPCFTF 464 Query: 459 PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMGD 517 + D+ + N +MA+ SG GK+ +I S++ ++F+MG+ Sbjct: 465 FNRLGEPVLFDVLHHDFISQNSHMALFANSGGGKSVATGWMINSLMATKNARIILFEMGN 524 Query: 518 GYKSL---CENMGGVY-------LDGETLRFNPF--------ANITDIDQSAERVRDQ-- 557 + + + G E + NPF +++ + Q Sbjct: 525 SFDRMLLHAKAHGKKTKQLLLSNKKNEAVPLNPFCEAYKAIHEITDNLNVEQAALIAQKI 584 Query: 558 --------------------------------LSVMASPNGNLDEVH-----EGLLLQAV 580 L M + L+E E LL++ + Sbjct: 585 MTLKANLEQPANSEDLSCDDGSRSYLAELALALRTMITEANALEEEQFTLADETLLIEVL 644 Query: 581 RASWLAKENRARIDDVVDF-LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 + L N + + + + R+ +M L+ Y N ++F Sbjct: 645 SDAILTSFNHDIPQMLTEHVVSAFKRRLDKETVARKKDRILDMHDRLNSYVINSAKSRFF 704 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY-RTPRNLKKLNVIDEG 698 N L D + +++ ++D L VM SL+ I + IDE Sbjct: 705 NVPTEPL-GDFDIFHVDISAIKDDTGKLALVMVSLLPRILAMAEASQNDHRPTFLFIDES 763 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 L F+ V + AR+ + ITQN+ D + S A I+ Sbjct: 764 H--LQFQIPSVVAVCLLVAKVARKLGLWLVAITQNVTDMN----SEKATKILSLIETWIL 817 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 L KE + + P Q +I + K ++ +L + R+ Sbjct: 818 LGLDEKEISDVKRF--KSLTPQQEALIRDIDSQKG-LYAEAVLLGSRYQGLFRVIPPRYL 874 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMAS 860 A+ ++ + K+ + +A LA + + + Sbjct: 875 LALLMTEKSEKAQRHTLEKQH-DVLKAAELLAEQLENKKQSK 915 >UniRef50_C6N556 Type IV secretory protein VirB4 component n=3 Tax=Legionella RepID=C6N556_9GAMM Length = 933 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 152/951 (15%), Positives = 296/951 (31%), Gaps = 118/951 (12%) Query: 5 LEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLF-MNDT-TM 62 ++ V+QAVN L+ + + L + D+ E+ LF +ND ++ Sbjct: 3 MKRVSQAVNWLLGEGSKNPPKMATIKKGYAKQEHSLAECLAFVDFCDETNLFLLNDGVSV 62 Query: 63 GFMLEAIPINGANESIVEALDHMLRT---------KLPRGIPLCIHLMSS---------Q 104 G E I A + E L + L + P + + S + Sbjct: 63 GSGFELGDIP-AEATSPEHLQAVFSKIRDTFANVVPLHQEDPWVMQMYVSDEYSLDPVLK 121 Query: 105 LVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISY 164 + I L + ++ + R + P R +F Sbjct: 122 HIQSAIAPELLKTQFTEDYLNRLQDLFNKMVRPQGLFLDPKTGAAFRGRRRRIRVLFYRR 181 Query: 165 CSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 K +LE E++ I A L +T + + +A+ + N NP Sbjct: 182 YQHLKTTREQAVLEHEDVSAQIIAKLISPGLTLKRLTGKAYYSWWVKWFNPNPALTEGDS 241 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS---TARILNFHLARNPEIAFLW 281 QL Y + + + + + ++ E + Sbjct: 242 EQLL--QRFPYPYGNKPAGFCFPQNIFFSPVVSDEKGFIFDEIKHRVLYVDGLKEAPAIG 299 Query: 282 NMAD-----NYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAK 336 ++ N + + I TL++V + M +EK K Sbjct: 300 LISREKPQANPKHRYALLDKLPEGSIYTLSVVFSSDEA----LDAHLMRIEKGIIGISLK 355 Query: 337 WFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGF 396 + + R L +G + + KD +T ++E+D+ + F Sbjct: 356 P----SEVRNDIKTARDELSTGN-RLFWVNQAVYYRGKD-EQTLAQIEKDLHSLFIDAKM 409 Query: 397 ELIS--PRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP- 453 LIS + + ++L LPF + K + + +A L+P+ N Sbjct: 410 PLISSAFDVHPLNSYLNGLPFSFVPSFAR--KHLCYDRLVFASELAALLPVYGRNQGAKH 467 Query: 454 -AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAV 511 + D+ + N +MA+ SG GK+ +I S++ V Sbjct: 468 LPCFTFFNRLGEPVLFDVLHHDFVSQNSHMALFANSGGGKSVATGWMINSLMATKNARIV 527 Query: 512 VFDMGDGYKSL---CENMGGVY-------LDGETLRFNPF-----------ANITDI--- 547 +F+MG+ + + + MG + + NPF N+++ Sbjct: 528 LFEMGNSFDRMLVHAQAMGKKTKQLLLSNKKSKAVPLNPFCEAYKAIPEISDNLSEEKAA 587 Query: 548 -------------------------DQSAERVRDQLSVMASPNGNLDEVH--------EG 574 ++S + + L + + +E E Sbjct: 588 LLAQKMVDLQSHLSEKAEINDLNCDEESRSYLAELLLALRTMITEANEEEEKKFSLSDET 647 Query: 575 LLLQAVRASWLAKENRARIDDVVDF-LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 LL++ + + L + + L + + E P + R+ EM L+ Y N Sbjct: 648 LLIEVLSDAVLTSFKDEVPQMLTEHVLAAFARRVELEEVPRKKDRILEMHDRLNSYVINS 707 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKL 692 ++FN L D + +++ ++D L VM SL+ I T N Sbjct: 708 NKSRFFNVPTEPL-GDFDIFHIDISAIKDDKGKLALVMVSLLPRILAMAEATQNDNRPTF 766 Query: 693 NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGN 752 IDE + + AR+ + +TQN+ D + S A Sbjct: 767 LFIDEAHLQFQIDVIVSSCLLA--AKVARKLGLWLVPVTQNVADMN----SEKATKILSL 820 Query: 753 SSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRL 812 I+L KE A Q Q P Q +I + K ++ +L + R+ Sbjct: 821 IETWILLGLDEKELADVKQF--KQLTPEQEALIRDIDSQKG-LYAEAVLLGSRYQGLFRV 877 Query: 813 FVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEA 863 A+ ++ + ++ + +A +A + +LE Sbjct: 878 IPPRYLLALLMTEKSEKASRHLLEEQH-DVLKAAEIVAERLENKTHNALEE 927 >UniRef50_A1WSV5 CagE, TrbE, VirB component of type IV transporter system n=2 Tax=Proteobacteria RepID=A1WSV5_VEREI Length = 804 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 107/849 (12%), Positives = 260/849 (30%), Gaps = 101/849 (11%) Query: 45 PYRDYNQESGLFMNDTTMGFMLEAIPING------ANESIVEALDHMLRTKLPRGIPLCI 98 PY + +++ + + D + F+L+A + E+ + L+ +L + + + Sbjct: 18 PYNYHVRDTIVSLEDGRVAFILKAKSLPFEVTSDKVLENQYDGLNGLL-LSIAKSTGSRL 76 Query: 99 HLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 + + +++ EF + + A Y + + + + Sbjct: 77 AVWAH------LDHYQTEFKTDYRFGYEWMRLFSAKY---------MAKFEGTDIFENDF 121 Query: 159 RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA------FIDIVGEM 212 + I E+E + + ++ ++ F + + + Sbjct: 122 YLTFILKPGMNDNLEECIRELEEIQLSVTQTVAPYECEVLSMYEHDGNQFSQFYEFIAYL 181 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 N + + L + + + + L L + G +A F L Sbjct: 182 YNGFWERVPVTSLPL--FQAVQTSALHHGYKL------LETRFPDGGNRYSAF---FDLK 230 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P+ NP L + PFI+ L+ + + N +E Sbjct: 231 DFPDPTTRGK--------FNPLLELPFPFIMCLSFTFINTADSIRMINQSLNKMESAGDE 282 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 + ++ + + + SGQ + + K +T Sbjct: 283 AV--------EQMDDMSLGKGAIMSGQVYFGELHGALAVYGKTEKQTEDRGATARTTLSG 334 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 + + + F + P + K + S N + + Sbjct: 335 SCATQFVPATISAPETFFSMFPGNVKRRPRPMPKTTRNLLGLFSMNTYSSGKQYGNPLGD 394 Query: 453 P-AGLLAPTYRNQLAFIDIFFRGMNNTNY------NMAVCGTSGAGKTGLIQPLIRSVLD 505 A + T + + + + + + + G +GAGKT L L+ + Sbjct: 395 GSAVMPLQTTVHGVYHFNFHYSLPELDSRGEKRAGHTVILGATGAGKTTLQTTLLTFLGR 454 Query: 506 SGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMA 562 D + E +GG Y GE NPF + D Q+ + D + Sbjct: 455 LDNKLFAVDKDGSMRGFIEAVGGTYFRLASGEPTGLNPFQ-LPDTPQNRNFLYDLVGACG 513 Query: 563 SPNGNLDEVHEGL-LLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDE 621 G + + +AV + + R ++ + + ++ Sbjct: 514 RKAGQEGTAEDTKDIKRAVDNVFELPFEQRRFGVLLQSIPDRGENC-------------- 559 Query: 622 MIVLLDQYTA---NGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSLIIY 677 + L + +G Y ++ + + + K V ++ ++ Y Sbjct: 560 LARRLADWCYGEVDGRYAYALDNPQNNFDWEGFKRVGFDVSDFLVAGH---PATEPILAY 616 Query: 678 IENRMYRTPRNLKKL-NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 + + R+ L V++E W L + + I +T RR + ++Q+ D Sbjct: 617 LFHLKTLMQRDGALLATVVEEFWLPLQY--PTTADQILDSLKTGRRRGEFIVLVSQSPED 674 Query: 737 FDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWF 796 S A + KI L E+ + +F ++ Sbjct: 675 VI---RSPLLPAVLQQTPTKIYLPNPDAEYTTPDGGGYSRFGLTTKEFQKL--KKLGLQS 729 Query: 797 SSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKEGLSIHEA---VWQLAW 851 F+++ + SS +L ++ + A+ + D DF+++ + + + + ++++ Sbjct: 730 RMFMVKQGSQSSLAKLDLNGMGDDIAVLAMDAEDFKYLDAAKAQAGTHPDQWVPLYKVLR 789 Query: 852 KKSGPEMAS 860 KK +++ Sbjct: 790 KKGREKVSQ 798 >UniRef50_C7WD64 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis JH1 RepID=C7WD64_ENTFA Length = 816 Score = 300 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 119/750 (15%), Positives = 221/750 (29%), Gaps = 94/750 (12%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E + +L + L I +++ + E L + Sbjct: 89 ELTFSSYCELLNSC-DSDTSLQISIINRSKDKKQFEKDLSYELVDDGLDVYRKEMNHMIS 147 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 K L + + R K I + L + Sbjct: 148 NKIKYGNSSLQKEKYITFNQR------------AKTLEQAIPALNRLQGDLEDQFSEMGC 195 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + + + +V +++ N + L + DSFD K R D +G Sbjct: 196 EVEELSGIERLRVVNDILRPNKKLHFEYEDLLFSGLTTHSAIAPDSFDFKYRKDRFKMG- 254 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 +L P A+ L+ I +TL + DQ K Sbjct: 255 -------DYYGQVLYLRNYP--------AELSDILITNITDIPTNLQITLHIEPLDQQKG 299 Query: 316 HSEANLKYMDLEKKSKTSYAK----------WFPSVEKEAKEWGELRQRLGSGQSSVVSY 365 K +E++ K + + E EL ++ + S+ Sbjct: 300 LDLVKTKLSFMEQQKIDEQKKAARSNYDPNLIPMELRRSMDEAQELLDQMQGDNEKLFSF 359 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + A KD + + IL + RKN E + + L + Sbjct: 360 TFLVMAVDKD-ERKLDDTIEQILTAGRKNDCEFAKLNYLQEEGLNSTLLWGNN------- 411 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQLAFIDIFFRGMNNTNYNMA 483 + + + + A +P A + P G + L +D N Sbjct: 412 -FVPIHRTLTTASTAVFIPFTAQELMQPNGKYYGLNSVTKNLVTLD----RRKLKAPNGF 466 Query: 484 VCGTSGAGKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRF 538 + GT G+GK+ + + + + D +V D Y L E + G + G Sbjct: 467 ILGTPGSGKSFATKKEMTAVLLSDPDAEVIVIDPEREYTPLAEALNGEVIQISAGSKNHV 526 Query: 539 NPFANITDIDQ-------SAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN-- 589 NP D + V ++ N L + L+ ++ R ++ Sbjct: 527 NPMEINNDYADDDDPVILKTDFVLSLCEMLIGGNIGLSPTQKTLIDRSCRFAYKKYFENG 586 Query: 590 --RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 + D + LK+ + E ++ V L+ YT F S + ++ Sbjct: 587 SGMPTLKDFSNILKDQPEDE-----------ARQLAVELELYTEGSL--SVF-SHQTNVD 632 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKN 706 + +V ++ L L M ++ I NR+ + IDE L F N Sbjct: 633 TSKRFIVFDVKDLG--KQLRSMGMLIILDQIWNRITSNRNAGRRTWVYIDEIQLL--FSN 688 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 + + + AR+ ITQN+ S S A NS + ++L QS ++ Sbjct: 689 EYAENYFFELWSRARKWGAIPTGITQNVSTLLS---SLNAERMLSNSDFVLMLNQSQRDR 745 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWF 796 + +L Q+ I + Sbjct: 746 ERLGELL--HISSRQKKYITNAKEGAGLMY 773 >UniRef50_C2BRH4 Transfer complex protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRH4_9ACTO Length = 740 Score = 299 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 102/786 (12%), Positives = 233/786 (29%), Gaps = 101/786 (12%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E I+E H L + L G + + +++ L +R+ ++ + Sbjct: 19 EGIIEKYAHFLNSHL-SGQHVQVTVLNRVLNKERLARDVQLSPRGDGYDAQRGEYND--- 74 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 + V ++ +P+ ++++ + + + A + Sbjct: 75 ------LIVQRLQNGRNNVITEKYVTLTVEAPTLEEAKTVLSRI--AAEDAAALHEVGGC 126 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 ++ + ++ + ++ + +L + V +Y+ LG Sbjct: 127 HAVQLNGEERARLLQHFLRPGAETDFKYE-ELLAQAATTKDFVSPWSIDTSSREYIGLGS 185 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 T+ L + P +L I ++L + DQ + Sbjct: 186 VR-----TSYWQVLVLRKLP--------PWMSDRVLKELSEIPVDLTVSLHIDPLDQSEG 232 Query: 316 HSEANLKYMDLEKKSKTSYAKWFP----------SVEKEAKEWGELRQRLGSGQSSVVSY 365 + ++ + T K ++ E +LR +L + Sbjct: 233 LKLVKRQIASMDMQRGTEQRKLIKQGLTYDLLPHELQASYDEAVDLRTQLEQSNEKLFET 292 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + + + E E + ++ K+ +L R+ + LP + Sbjct: 293 TIVVGV-AGETVEEMHENVKRVMRVAGKHSCQLEVLRYMQLDALNALLPLG--------V 343 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMA 483 + + + + A ++P + P GL L D N N Sbjct: 344 CKLPISRMLTTAVAAVMVPFTTQEIMQPGGLFYGINALSKNLIVAD----RREGMNSNGF 399 Query: 484 VCGTSGAGKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRF 538 + GT+G+GK+ + + + ++ D Y L +G + G Sbjct: 400 ILGTTGSGKSQFAKFEMEQLFLRRPNDEILIIDPEREYPPLAAELGATRVVISAGSQDCL 459 Query: 539 NPFANITDI--------DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 NP ++ V V+ N L ++ +A + + A Sbjct: 460 NPLDLDKTTKREEGNPVNEKCTFVTSICEVLLGGNDGLSAAKRSIIDRAAQKIYRAYWAD 519 Query: 591 -----ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 + + + L+ + + E+ L+ Y + G + + + Sbjct: 520 PTAMPPTLATLYEQLRQEPE-----------ADAAEIATGLELYASGSAAGF---AQQTN 565 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDF 704 + ++ V ++ L L M ++ I R+ + + IDE L F Sbjct: 566 VDRANRVTVYDIADLSKD--LQTFGMMVVLEEIWARIVKNKAEGRRTWLYIDEFHLL--F 621 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 N + + Y+ R++ A ITQNI + +++ AR NS +L Q + Sbjct: 622 ANEYAASYTQGIYKRVRKYGAAATGITQNIEELLANER---ARLMLSNSDGLFLLNQQST 678 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMY 822 + L QR L + +D ++ Sbjct: 679 DADALTDLLK--LSVQQRGYFTNVQPG------CGLFKTGEAVVPFDNTMDTNSHLYKVF 730 Query: 823 SSDGPD 828 S+ + Sbjct: 731 STKFEE 736 >UniRef50_C1SHE1 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE1_9BACT Length = 771 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 124/763 (16%), Positives = 258/763 (33%), Gaps = 107/763 (14%) Query: 34 EMSFPQFSRLLPYRDYNQESG-LFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPR 92 ++ QFS L PY Y++E+ F+ D ++G++ E P+ A+++I + ++R Sbjct: 22 QIKREQFSSLFPYVSYDEETESYFLRDNSVGWIWECSPVLFADDNIFNQIASVIRGAEAP 81 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLP 152 + L + + + + E + + Y + Sbjct: 82 DTIIQYMLFADPFIDQIADGYKNLRGRNKEILPIHSQLID-DYSEFIRKHGNRGMWQLSG 140 Query: 153 LTLRHYRVFISYCSPSKKK-------SRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 LRH+R+FIS P K R +++ + + ++ S++ ++ Sbjct: 141 TPLRHFRLFISVRIPVKADASTNTGKYRKEVVGHLDYISNVKESMKL--FNPLSMKPDRL 198 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 I ++ ++N + + + K + D ++ Q + +++ + + R R Sbjct: 199 ITMLYRLVNPDLE--HNKTIEWDENIPIHKQILYSDTEVERAKNSIRFNGR--------R 248 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLL-------NPELSISCPFILTLTLVVEDQVK---- 314 + + P D + N + CPFI ++ +V+ +K Sbjct: 249 VGILTPKKLPREIDNLFANDLIGYVSKGITAAENDINQLQCPFIYSVNIVINKNLKSKLQ 308 Query: 315 THSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK 374 T + N K + K + + +E + QR G V + Sbjct: 309 TKAVQNSKATESANKDGRHFDAFAAGTNNRKQENFYVAQRYEMG-ERFVHVIPQLMILA- 366 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMR-NFLTCLPFMAGKGLFKQLKEAGVVQR 433 ++ + + + G E + R + F+ LP F+ L + Sbjct: 367 ESEDELTSKLNRAKSIWNTCGVECQTERDYLLHVLFIAGLPCGMYHSNFQDLDRDFI--- 423 Query: 434 AESFNVANLMPLVADNPL-TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 +S + P+ A LL R +L +DI G N N V G +GAGK Sbjct: 424 LDSKGASLFAPVQASFSGVGSPVLLYIDRRGELVSLDILNTGK---NKNAYVTGGTGAGK 480 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPF--------- 541 + + + S + G + + D Y+ C G Y+ D + N F Sbjct: 481 SFFMNGFVNSYMSIGAKFRIITVCDSYRKACYMTDGQYIEHDESGMVLNFFEAAGVVKGT 540 Query: 542 ------------------ANITDIDQSAERVRDQLSVMASPNGNLD------EVHEGLLL 577 + + + V+ + N+ + ++L Sbjct: 541 LIQSINHNGVTYPARTKVEILEQGGSEIKILVGDSDVLYVRSENVGSYCIEMDGDTLIML 600 Query: 578 QAVRASW--------LAKENRARIDDVVDFLKNASDSEQYAES----------------- 612 + AS L ++ I++ V ++ + E + Sbjct: 601 TGILASMVTSRAGSELDEDELTIIENAVSYMFSVKGRETMIDDIHDYLMNISEYHAQDDR 660 Query: 613 -PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 R + + L +Y + G YG +FN +R + +VV +L + L ++ Sbjct: 661 SKYHRDTAYRLALRLGKYCSGGQYGHFFNGKST-VRFKSDLVVADLT--KTPVDLRKVIV 717 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 + IE +Y+ R + V+DE W+ L +N F++ Sbjct: 718 LAFANIIEQEIYKGDRKTPQFVVLDESWQTLS-ENPYAARFVK 759 >UniRef50_P55399 Probable conjugal transfer protein trbE part 2 n=9 Tax=Proteobacteria RepID=TRBE2_RHISN Length = 662 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 95/703 (13%), Positives = 204/703 (29%), Gaps = 109/703 (15%) Query: 176 ILEMENLVKIIRASLQGASITTQTV---------DAQAFIDIVGEMINHNPDSLYPKRRQ 226 + + + +L + T+ + + I + Sbjct: 6 KNAIREIEQYFANTLSIRRMETREAAERGGERVARYDELLQFIRFCITGENHPIRLPAAP 65 Query: 227 LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 + + +E KV +L + + P ++ Sbjct: 66 MYLDW-IATAELEHGLTPKVENRFLGV---------------VAIDGLPAESWP------ 103 Query: 287 YSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAK 346 +LN + + + + D + + ++K + + + F + + Sbjct: 104 --GILNSLDLMPLTYRWSSRFIFLDAEEARQKLERTRKKWQQKVRPFFDQLFQTQSRSVD 161 Query: 347 --------EWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFEL 398 E + + S + Y I F D E E + I + GF Sbjct: 162 RDAMTMVAETEDAIAQASSQLVAYGYYTPVIILFDSDR-EALQEKAEAIRRLIQAEGFGA 220 Query: 399 ISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP----- 453 N +L LP + + L + N+A+L+PL + +P Sbjct: 221 RIETLNATEAYLGSLPGNWYCNIREPLIN--------TSNLADLIPLNSVWSGSPVAPCP 272 Query: 454 ------AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG 507 L+ + +++ + + + G +G+GK+ L+ + Sbjct: 273 FYPPNSPSLMQVASGSTPFRLNLHVDDV----GHTLIFGPTGSGKSTLLALIAAQFRRYD 328 Query: 508 G-FAVVFDMGDGYKSLCENMGGVYLDGET--------LRFNPFANITDIDQSAERVRDQL 558 FD G L GG + + L F P +++ A Sbjct: 329 RSQIFAFDKGSALLPLTLAAGGDHYEIGGDNAEGRKALAFCPLSDLESDADRAWAAEWIE 388 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 ++A + H + + V A + D V ++ Sbjct: 389 MLVALQGVTITPDHRNAMSRQVTLMASAPG--RSLSDFVSGVQ----------------- 429 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + E+ L YT +G GQ +++ L A E+ L + + ++ Y+ Sbjct: 430 MREIKDALHHYTVDGPMGQLLDAEHDGLSLGA-FQTFEIEQLMNMGERN---LVPVLTYL 485 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 R+ + + V+DE W +L I + + R+ A + TQ+I D Sbjct: 486 FRRIEKLLDGSPSVIVLDEAWLMLGH--PVFRAKIREWLKVLRKANCAVVLATQSISD-- 541 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY-PDQFLPLQRDMIGKFGAAKDQWFS 797 + S + KI L A + Y F Q ++I + Sbjct: 542 -AERSGIIDVLKESCPTKICLPNGAAREPGTREFYERIGFNERQIEIISNATPKR----- 595 Query: 798 SFLLQVENHSSWHRLFVDPLSRAMY-SSDGPDFEFVQQKRKEG 839 + + + + P++ + +S D ++ E Sbjct: 596 EYYVVTPEGRRLFDMALGPVALSFVGASGKEDLNRIRTLHSEY 638 >UniRef50_A6V9Y0 Type IV secretory pathway, VirB4 component n=62 Tax=Proteobacteria RepID=A6V9Y0_PSEA7 Length = 983 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 141/933 (15%), Positives = 294/933 (31%), Gaps = 123/933 (13%) Query: 15 LVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFM--NDTTMGFMLEAIPIN 72 L + L + P F LLP+ +Y + + + + + E +P+ Sbjct: 54 LPNTGSKNGATQAEASRLYDHD-PSFVDLLPWAEYLPDEQVMLLEDGRSRAVFFELVPLG 112 Query: 73 ----------GANESIVEALDHMLRTKLPRGIPLCIHL---MSSQLVGDRIEYGLREFSW 119 A +++ EAL + + + +S +++ + + Sbjct: 113 TEGRDPNWMQNARDALKEALQNSFDEHETSPWIVQFYAQDEISWDNFQEQLRQYVHPRAR 172 Query: 120 SGEQAERFNAITRAYYMKAAATQFPLPE--------GMNLPLTLRHYRVFISYCSPSKKK 171 +E + A+ ++++ + L +R + ++ + Sbjct: 173 GSAFSEMYLALM-KHHLEGISKPGGLFVDTAVSKLPWRGQQRRVRMVVYRRIRKADAQIR 231 Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 + ++++ + I+ L A I + Q + + N +PD L L + Sbjct: 232 GQDPTAYLKSICERIQGGLANAGIVASRMSGQDVRNWLIRWFNPHPDHLGKTDADLRRFY 291 Query: 232 DL----NYQCVEDSFDLKVRADY------------LTLGLRENGRNSTARILNFHLARNP 275 +L + ++D L D+ T G+ I+ L + P Sbjct: 292 ELVCRPDEPILQDELPLADGTDFSQNLFYRQPVSDATQGVWLFDAMPHRVIVVDQLNKAP 351 Query: 276 EIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYA 335 L + +L +T+VV Q L KK+ Sbjct: 352 LTGHFTGETLKGDGLNALFDRMPEDTLLCITMVVTPQD----MLEGHLQQLSKKAVGDTQ 407 Query: 336 KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNG 395 ++ +R+ +G + + + + +D+ + E + N G Sbjct: 408 ASI----HTREDVATVRRLIGR-EHKLYRGSIALFVRGRDHTQ-LEERCITLSNVLLGAG 461 Query: 396 FELISPR--FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP 453 + P+ + ++L LP + L+ Q + ++ANL P+ T Sbjct: 462 LVPVEPQNEVGPLNSYLRWLPCNFDPNEKRALE--WYTQMMFAQHIANLSPIWGRTTGTG 519 Query: 454 -AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAV 511 G D F + N + + G +G+GK+ + LI +L Sbjct: 520 HPGFTLFNRGGAPLTFDPFNKLDRQMNAHGFIFGPTGSGKSASLTNLISQMLAMYLPRMF 579 Query: 512 VFDMGDGY---KSLCENMGGVYLD-----GETLRFNPFANI------------------- 544 V + G+ + + G G + P+A+ Sbjct: 580 VAEAGNSFGLLADFAKRFGLSVHRVRLAPGSGVSLAPYADAIKLVESPDQVKVLDAEDIE 639 Query: 545 ---------TDIDQSAERVRDQLSVMAS---------PNGNLDEVHEGLLLQAVR--ASW 584 D++ + ++ ++A + L + QA+ A Sbjct: 640 ASDSVQGSKADLEDDQRDILGEMEIVARLMITGGEEKEDARLTRADRSAIRQAILAAART 699 Query: 585 LAKENRARID-DVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE 643 A NR + DV D L AS S+ +P R+RL EM + + G G+ FN + Sbjct: 700 CAAANRTVLTQDVRDALYQASRSDG--SAPERRARLAEMAEAMQMFCM-GADGEMFNREG 756 Query: 644 PSLRDDAKMVVLELGGLEDRPSL--LVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWR 700 +A + V++ L SL+ + N R + + + DEG Sbjct: 757 TPW-PEADLTVVDFATYAREGYAAQLGIAYISLLNTVNNIAERDQFKGRPIVKITDEGHI 815 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 + K+ + + K + R+ + TQNI D + + + L Sbjct: 816 I--TKHPLLLPYAMKITKMWRKLGAWFWLATQNIDDIPAS-----GAPMLNMIEWWLCLN 868 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA 820 E K ++ + P Q+ M+ + F+ +L + R+ L A Sbjct: 869 MPPDEVEKISRF--RELSPAQKSMMLSARKESGK-FTEGVLLAKGKEYLFRVVPPSLYLA 925 Query: 821 MYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWK 852 + ++ + + G EA Q+A Sbjct: 926 LAMTENEEKNQRYNIMQATGCDELEAALQVAAD 958 >UniRef50_C1F4R3 Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4R3_ACIC5 Length = 834 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 126/864 (14%), Positives = 263/864 (30%), Gaps = 116/864 (13%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPIN------GANESIVEALDHMLRTKLPRG 93 F L + E+ G +L ++ G E V+ L+ L+ G Sbjct: 17 FGDYLNLYGFWNETAFLTKSGDPGMVLRVTGVDYESLDYGEQEYAVKRLEAALKN-FGPG 75 Query: 94 IPLCIHLMSSQL-------VGDRIEYGLREFSWSG---------EQAERFNAITRAYYMK 137 + +L + D I +E E + + K Sbjct: 76 FHVYQYLFKTNKPEIPFAEYDDAIVQAGQERRREHFLKKADHLFEIEIYYAILLEGARSK 135 Query: 138 AAATQFPLPEGMNLPLTLRHYRVFIS---YCSPSKKKSRADILEMENLVKIIRASLQGAS 194 + + L + S + + D+ +E V+ L Sbjct: 136 TGFSTAFERLSHDPAGGLDELKAQFSNRSMKVLLRSQIERDLAWLEQRVQTFVRQLADF- 194 Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSL--YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + +D + ++N++ + P Q +N + L+V DY+ Sbjct: 195 ARIEVLDYKGQFRFFRRLVNYDDWRIAGEPGHSQFLCDQVVNSLLEPERDHLRVGDDYVR 254 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + + + + L+ L I F+ + Sbjct: 255 ILTMKE-----------------------AIGETRPLALDALLKIPANFMAISEWMPLPA 291 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPS-----------VEKEAKEWGELRQRLGS--GQ 359 E N + ++ E + + L L + Sbjct: 292 EAARKEVNKRRRHFNISKTGFVSQLSNDPAKTNPRDVLVDESKQADIENLGDCLRALGDG 351 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 + + L I + KD + + + + F L + +N + + +P Sbjct: 352 RQLGEFSLTIVLYGKDR-QAVDSLVGEFASVFTNADGTLFAETYNQLNAYFAIVPGNYAF 410 Query: 420 GLFKQLKEAGVVQRAESFNVANLMP--LVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNN 477 L + + ++P V + T F+++ + Sbjct: 411 NLRRLYLLNTNYADLS--FLFTILPGEKVNSYLGAEYLAVMETDNQTPYFLNLHCGEV-- 466 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD----G 533 + + G +G+GK+ L L+++ F +FD+G G+++L GG YL+ Sbjct: 467 --AHTLILGMTGSGKSYLCSFLLQNAQKYNPFTFIFDIGGGFEALTHIFGGSYLNVGREE 524 Query: 534 ETLRFNPFANITDIDQSAERVRDQLSVMASPNG---NLDEVHEGLLLQAVRASWLAKENR 590 NPF+ ++ + + L V+ + LD E L + ++ + + Sbjct: 525 RDFTINPFSLAP-TRENQQFLFSLLRVLIEGDNQRYKLDFREEIKLWNGIERIYMLEPGQ 583 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 + ++ S + E+ L ++T G YG F++ +L Sbjct: 584 RTLSNL-------------------SSIVGELKDRLYRWTRAGQYGFLFDNPNDTLSFTN 624 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR-NLKKLNVIDEGWRLLDFKNHKV 709 G D P LL ++F ++ + R K ++DE W + N + Sbjct: 625 -FQTFNFRGWGDAPELLEPLLFYILHRASQEICDPRRLATFKTFLMDEAWLFMR--NQVI 681 Query: 710 GEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKY 769 ++I + + R+H A I TQ+I + S + KI L + A Y Sbjct: 682 RDYIMQAQKMWRKHNAAMILATQSIKELQE---SGMLHIVAESCPTKIFLANPEMDRAVY 738 Query: 770 NQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDF 829 + + + D+I L++ S L VD ++ M + + Sbjct: 739 AEAF--HLNNTELDLIASLVPP-----GQMLIRKAQSSKKVHLNVDSVTHWMAVNSANEN 791 Query: 830 EFVQQKRKEGLSIHEAVWQLAWKK 853 ++ I E + +LA + Sbjct: 792 LLRREYFTRYG-ISEGLRRLADEH 814 >UniRef50_C1XZE7 Putative uncharacterized protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZE7_9DEIN Length = 866 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 145/897 (16%), Positives = 267/897 (29%), Gaps = 97/897 (10%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIP------INGANESIVEALDHMLRTKLPRG 93 LLPY + E +F+ D + P NG ++ L +L + +P G Sbjct: 6 LHTLLPYWE-IHEGVMFLEDGRYEVGVAVNPGPDLFRSNGDRSLLLTQLRGLLESVVPTG 64 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA-------YYMKAAATQFPLP 146 L I + S + I ++ + + Sbjct: 65 ERLRIIVESRHGDAEEIATYRSGKERGRAVFRMLAEERARMQEGLARKGLRLSWRVYFTV 124 Query: 147 EGMNLPLTLRHYRVFI---------------SYCSPSKKKSRADILEMENLVKIIRASLQ 191 G + ++ Y + + R + + L + L Sbjct: 125 SGGQPRTGGSNALSYLLGRAAAALGSGGKVARYTPFAPMEIRGLLEQAHALRDSLLGYLS 184 Query: 192 GASITTQTVDAQAFIDIVGEMINHNPDS-LYPKRRQLDPYSDLNYQCVEDSFDLK--VRA 248 A +D Q + +N + Y L + D LK + Sbjct: 185 RAGFEAWAMDDQEVFRLCYRFLNDHEAPAPYRIDPGYATEGTLRREPERDPQTLKRALGR 244 Query: 249 DYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLV 308 + R+ + + + P +LN L +++ + Sbjct: 245 TEIYNVARDYLHLGLDYVRMYSMYGLPSATQY--------GMLNNALIQERSYLIV-DVQ 295 Query: 309 VEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLN 368 Q + + + + + + SV ++ E +R + + + Sbjct: 296 HPPQGAVLQKLENRKRQAWQLNSDTSSAPESSVANAVQDLLEALRRQEKSGEHFLRWGAS 355 Query: 369 ITAFCKDNNETALEVEQDILNSFRKN-GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 + D+ E +E+ +L G + + LPF Sbjct: 356 LLVR-GDSVEHLDAIERIMLPRLGDMMGAKWRRNGEYLAYPYSLLLPFSGR--------S 406 Query: 428 AGVVQRAESFNVANLMPLVADN--PLTPAGLLAPTYRNQLA-FIDIFFRGMNNTNYNMAV 484 ++ S NV+ P T R ID+F TN+N AV Sbjct: 407 QDILFSGLSNNVSQASVFYGPWVRPRLKRATCLSTNRYSSFTNIDLF--DPKTTNWNTAV 464 Query: 485 CGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNP 540 G SG+GKT +Q L+ + G ++ D Y L GG + G + N Sbjct: 465 IGASGSGKTFTVQMLLSDAMAEGEMDLIIVDKKGDYTPLVTLAGGATISIAPGAGVTLNM 524 Query: 541 FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLL-----QAVRASWLAKENRA---- 591 F + +E L + + E L +AVR ++ A R Sbjct: 525 FDLPPGATEPSEEKLTFLQRVFHILKSGSPDEEIHLKEQLWMEAVRTAYQAALERLPGEE 584 Query: 592 -------RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + DV++ L N ++ ++ + L +T G G++ + Sbjct: 585 GFRLGTVTLSDVLNTLPNLGKLSGRPIEAEEKTLARKLAIELSVWTQ-GAMGRFLDGKTN 643 Query: 645 SLRDDAKMVVLELGGLE--DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + D +V ++ G + D P + + + I +R+ R PR KKL + DE + Sbjct: 644 VVMGDNPVVYFDIAGFDAFDDPRVTALGISLIAQLIYDRLNRRPRERKKLILFDEAHAV- 702 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 FK + YR AR + TITQ+I D+ + ++S +IL+ Sbjct: 703 -FKIEASAALVTDLYRRARSYGAGVWTITQSIADY----QGPFVKGVLDSTSIFMILRVP 757 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS----WHRLFVDPLS 818 +E L D + +W S R+ PL Sbjct: 758 EQEELVVQTL---GLPESMVDYLATLERRNGEWSELLYFLRGEDSRLQGDILRIAPTPLD 814 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 ++S D + E + + SG + A W E + A Sbjct: 815 YWAFTSSARDVARRRALEAE-----RGLLEALGLLSGVDTAPYRPWFAEEQLVEETA 866 >UniRef50_Q46698 TraB protein n=9 Tax=root RepID=Q46698_ECOLX Length = 866 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 120/929 (12%), Positives = 263/929 (28%), Gaps = 136/929 (14%) Query: 20 KLPDESAKANEVLGEMSFPQF-SRLLPYRDYNQESGLFMNDTTMGFMLEAIPING--ANE 76 + K ++ P + LPY + + + M + + + A++ Sbjct: 1 MRAATATKPKKIDAYRKEPSVNKKYLPYSYHLNDYVISMENGDLMAFFKLDGRTHDCASD 60 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 + L T + + L + + + + + + R + Sbjct: 61 RELVTWHKDLNTLVKSFGTDHVELWTHEYHHE--AKEYPDGEYDHFFPAYIDQYNRKLHG 118 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFIS-YCSPSKKKSR----ADILEMENLVKIIRASLQ 191 + L + + F++ + P++ + + + +E++ + I +++ Sbjct: 119 DSKQLINDLYLTVIYKQVGDKTQKFLAKFEKPTRDEIQQMQNEALEGLEDISEQILEAMK 178 Query: 192 GASIT-------------TQTVDAQAFIDIVGEMI-----------NHNPDSLYPKRRQL 227 + + + +++ M + + Q Sbjct: 179 PYRFSSWVSIIVTNAVLKFLRLIKKNVKNLLKSMNQTFLTKPLLSNATSLNLRRLTLIQK 238 Query: 228 DPYSDLNYQCVEDSFDLKVRADYLTLGLREN-------------GRNSTARILNFHLARN 274 S ++ Q L ++ + Sbjct: 239 RWSSFISSQIWNGPSCLFAVIVSVSTSWTTALLAPCGGDVVQIRTVDHNFYTTGIEFREY 298 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 E LN ++LT + + + + L++ Sbjct: 299 EEDTEPGQ--------LNMLKEADFEYLLTQSFSCLSESSAKTFLTHQEKSLQETRDR-- 348 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 + + + G L S + + + + + D N + + Sbjct: 349 ------AQSQLAQLGTALDMLTSREFVMGYHHGTVHVWDNDQN-AVQAKARRVKVMLTGC 401 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA------- 447 G + + LP K A S+N + P Sbjct: 402 GVVGGTLSLASEAAYYRRLPGNQ--------KWAPRPVPINSWNFLHFSPFHNFMRGKPD 453 Query: 448 DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY------NMAVCGTSGAGKTGLIQPLIR 501 +NP PA + T + + + +Y + + G SG GKT L+ L+ Sbjct: 454 NNPWGPALTMFRTISGTPLYFNFHVTPLEELSYGKRPLGHALITGMSGEGKTTLLNFLLA 513 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGGVY---LDGETLRFNPFANITDIDQSAERVRDQL 558 + V+D G + ++GG Y G F P ++ +++ Sbjct: 514 QSMKYNPRLFVYDRDRGMEPFIRSVGGYYKVLQQGMPSGFAPLQIEP-TKRNNALIKNLF 572 Query: 559 SVMAS--PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIR 616 + NG + L + V A R V L + Sbjct: 573 RICVETTNNGPISATMATELAEGVDAVMGEGSLIPREARTVTILDGY--------VNEVV 624 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD-AKMVVLELGG-LEDRPSLLVAVMFSL 674 + LL ++T G YG F++D+ SL + +L + + + L Sbjct: 625 ENGVSLKGLLREWTREGQYGWLFDNDKDSLDLSANDIFGFDLSEFIAAKEEVSSPARTPL 684 Query: 675 IIYIENRMYRTPRNLKKLN-VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 I+Y+ R+ + +++ DE LD + + +++G +T R+ Y+ TQ Sbjct: 685 IVYLLYRVRDSIDGKRRVIQCFDEFHAYLD--DPVIEREVKRGIKTDRKKDAIYVFATQE 742 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 D S S R + KI L+ Y + D + Sbjct: 743 PNDALS---SRIGRTIMSQTVTKICLRDPEAIREDYA-----FLTDAEYDALMSIT---- 790 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSI-------HEAV 846 + FL++ S+ + P + D + + LS+ E Sbjct: 791 EHSRQFLVKQGQQSAIASFNLYPR-------NSDDIDADIKTMDNVLSVLSGEPQNAEIA 843 Query: 847 WQLAWKKSGPEMASLEAWLEEHEKYRSVA 875 +L + E WL+E+ +R A Sbjct: 844 HELVERLGNDP----EVWLKEY--WRLTA 866 >UniRef50_A6NYK4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NYK4_9BACE Length = 870 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 137/861 (15%), Positives = 269/861 (31%), Gaps = 82/861 (9%) Query: 32 LGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPING---ANESIVEALDHMLRT 88 +P +D + + D+ +LE PIN +NE + Sbjct: 21 RQAERLEFVQDYIPIKDL-RNGIVETTDSRYLKILEIEPINFLLRSNEEQWGIISTFASW 79 Query: 89 KLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEG 148 + L ++ + DR GL E E + +F EG Sbjct: 80 LKISPMRLQFKSVTRKADSDRYVAGL-EADIEKEDVAACRELGE------GTIRFIQEEG 132 Query: 149 MNLPLTLRHYRVFI--SYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQA-- 204 LT R + +F + S ++ + + R + + Sbjct: 133 SREALTRRFFLIFQYEAVRRQSDTDYGEVYAALQTVTQNARTYFAQCGNSIVQPKDEDAF 192 Query: 205 FIDIVGEMINHNPDSLYPKRRQLD----PYSDLNYQCVEDSFDLKVR------ADYLTLG 254 +I+ N P + +L+ + V K+R L L Sbjct: 193 VAEILYMYFNRRSCVEDPFQSRLNRVVVDAMTAKKRVVGVDPVPKIRAVNFVAPRGLDLS 252 Query: 255 LRENGRNSTARILNFHLAR--NPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 ++ + P+ M S+L+N + L + + Sbjct: 253 HPGYIVMDGMYYTYLYIRKSGFPQQVRGGWM----SSLINAGEGVDVDLHLRREIRGKTI 308 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 + L L + T + + + + ++Q L S + + IT Sbjct: 309 DRVAQRIRLNRTKLRELQDT--STDYEELAGSIQAGYYIKQGLSSRNEDLFYMTVLITVS 366 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 + +Q + + + ++ F + +PF E + Sbjct: 367 AP-TLDELQWRKQQMTDLMKSMDIQVGDCLFQQEAALRSTMPF----LYLDPSLERKSKR 421 Query: 433 RAESFNVANLMPLVADNPLTPAGLLAPTYR--NQLAFIDIFFRGMNNTNYNMAVCGTSGA 490 + A+ + G+L R N L +D F N N N +CGTSGA Sbjct: 422 NVLTSGAASTYMFTSFELSDDNGILLGLNRHNNSLCIVDPF-NTKVNKNANFTICGTSGA 480 Query: 491 GKTGLIQPLIRSVLDSGGFAVVFDM--GDGYKSLCENMGGVYLD---GETLRFNPFAN-- 543 GKT +Q + + G + G +K C +GG Y+ G + N Sbjct: 481 GKTFTMQLMSLRLRMRGVQCYILAPLKGHEFKRACHKIGGTYIKLAPGSSACINVMEIRP 540 Query: 544 -------------ITDIDQSAERVRDQLSVMASP-NGNLDEVHEGLLLQAVRASWLAKEN 589 +DID + QL + S ++ E LL +A+ ++ Sbjct: 541 TLTPEMELIDELDYSDIDSMLAKKIQQLMIFFSLLIPDMSNEEEQLLDEALVKTYANFGI 600 Query: 590 RARIDDVVD-----FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + + +K E + ++ ++ + + Sbjct: 601 THDNSSIYEDPGSGKVKTMPILGDLYEVLKESPLTARLATIVSRFVTGSAQSF---NRQS 657 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLD- 703 ++ + VVL++ L+ +L M + Y+ +++ + R KK+ IDE W+L+ Sbjct: 658 NINLSNRYVVLDISELKG--KMLPVGMMIALDYVWDQV-KADRTKKKMVFIDEIWKLIGG 714 Query: 704 FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 N + EF + ++ R + G + TQ++ DF + R+ NS KIIL Sbjct: 715 SANRQAAEFCLEIFKIIRGYGGGAVAATQDLSDFFGLEDGRYGRSILNNSKTKIILNLEP 774 Query: 764 KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS 823 E + + I +F L+ ++ + + M + Sbjct: 775 DEAEYVKDVLK--LTRTEIRSITQFERG------EALISSNSNKVPVIIKASREEQQMIT 826 Query: 824 SDGPDFEFVQQKRKEGLSIHE 844 +D + E + + K S+ E Sbjct: 827 TDRAELEAMLNELKAVASVAE 847 >UniRef50_C6BQD5 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BQD5_RALP1 Length = 844 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 122/874 (13%), Positives = 258/874 (29%), Gaps = 117/874 (13%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAI------PINGANESIVEALDHMLRTKLPR 92 FS ++P+ N +F D ++ + E + + VE + L+ Sbjct: 17 SFSEMVPWMGLNASDMVFNVDGSLMVVYEVAGIDAEGRLPIETDGYVENFERALKVFDEH 76 Query: 93 GIPLCIHLMSSQL----------VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 + I +G ++ ++ + Q E + Y + Sbjct: 77 ILVWSIMDRRRTEQYPDADFPTPIGKYLDLTWKQHLFGQRQYENRHYFAVIYRNLGGTSG 136 Query: 143 FPLPEGMNLPLT----LRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS---- 194 F ++ L + + ++K + + ++ R L+ Sbjct: 137 FFDKLSNHMDRYKVGILPALWKIGTAATSARKNASFAFEQFDSHENHFRQILEEFETTVS 196 Query: 195 -ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 + + + + + ++ D P + + L+ + +L Sbjct: 197 SLGFKKLHNSELLTFMHRRVSPPNDHHRVA----MPDTPVYLNTYLPDSTLRRKKKHLEF 252 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 + + + P + + +P L I ++ + + Sbjct: 253 E-----GDVVRYVGAMSVKNWPNVIGP--------GVTDPLLQIDGEITVSQCFEIWPKE 299 Query: 314 KTHSEANLKY------------MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 + + +E+ +KT K A++ + L + + Sbjct: 300 RAQKFIQDTQDHFMASSKPWMSLMIEQMTKTESDKVDAGKLALAEDAASALEDLTARERQ 359 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKN-GFELISPRFNHMRNFLTCLPFMAGKG 420 Y + I ++ D + + ++ ++ R G +++ R + F LP Sbjct: 360 FGHYNMTILSY-GDTEKEMEDTLSEVGSAMRTLVGAKVVRERMYALSAFTATLPGQWANI 418 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLT--------------PAGLLAPTYRNQLA 466 + G N+A+L L A PA L PT N Sbjct: 419 VRWGFVNVG--------NLADLAQLRAIRTGDRRNKHLSAQLQRPIPALALLPTEHNVPF 470 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDMGDGYKSLCEN 525 + + + V G S +GKT L+ LI ++FD Sbjct: 471 NYNFHQGDL----PHFFVVGPSRSGKTTLLNFLISQFFKYHPCNVLIFDKDYSCYVTSGL 526 Query: 526 MGGVYLD-----GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAV 580 G ++D G+ R NP + D+ + +R +++ + E +A+ Sbjct: 527 QGAKHIDMNPSTGKPPRMNPLRVVKDMTKRGWLMRWLQLIVSLRSYEWKTEDELTFNKAL 586 Query: 581 RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 R+ ++ DF+ R E+ + + +G +F+ Sbjct: 587 NMLAEQPPEHWRLSELADFV---------------RPLSSELYKEMLPWLEDGGTYPHFD 631 Query: 641 SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN--LKKLNVIDEG 698 S E R + +E+GGL + L + I+ + P L ++E Sbjct: 632 SVEDDFRL-SDFTDVEMGGLLEDEILAPVFIDYAFFCIDEMLTLDPTAAIKPTLIYLEEV 690 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W LL KN K+ E + RT + TQ++ + S N +I Sbjct: 691 WYLL--KNKKLRERFDNWLRTLAKKNAIVGMTTQSLAEIAD---SDIFTTIIDNIQNRIF 745 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 L + Q Q + I +F + E S + P Sbjct: 746 LPNPSVMAHLDLYRDKFQLNDEQIERIRTAKRKVQYYF----VNPEGMSRMVNVKFPPEM 801 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWK 852 A SD ++ R + + + Q + Sbjct: 802 LACLRSDQLARMKYEEFRAKL--VPDWQEQYIEE 833 >UniRef50_B9ZQ77 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQ77_9GAMM Length = 827 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 114/894 (12%), Positives = 247/894 (27%), Gaps = 132/894 (14%) Query: 25 SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLE--AIPINGANESIVEAL 82 + ++ + P + LLP+ + + D ++ M E G + + L Sbjct: 6 KTRPDQDYQQTHRP-LAELLPWMALITDGCVMNKDGSVLVMFEHEGFDREGVDALEINTL 64 Query: 83 DHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 + + + C ++Q + G+R F + + +A + Sbjct: 65 VERIESAMVVLDETCTLWWTTQRREIDPDPGVRSFDNPIADYVDRAWVKNLHSRRAYKHR 124 Query: 143 -FPLPEGMNLPLTLRHYRVFISYCSPS------------------------KKKSRADIL 177 + N+ + R + ++ + ++ I Sbjct: 125 NYLAISFANVKGSSRFFDLYAKATADGMPALKALMQAATIALQSKDRLLFEAEEVTHWID 184 Query: 178 EMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDS--LYPKRRQLDPYSDLNY 235 ++EN V ASL+ + + + + + ++ ++ + + P Q S L Sbjct: 185 KIENTVDQFTASLKT--LQLRRLKGKELLAVLHRTVSPSSKQKLVAPDPDQAYLDSYLGE 242 Query: 236 QCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPEL 295 + V YL +N + P + + + Sbjct: 243 D------AVTVHPRYLKFSGHKN-----RYAATASVKSWPHYSTP--------GIFDSIQ 283 Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT------------SYAKWFPSVEK 343 T+ V+ + +K+ A + Sbjct: 284 KADAELDFTVAFRVQSKESARGYIEDVRRHNANFAKSLFGYAKEAFTQSDTATIDNTRLI 343 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF 403 +++E + LG+G S+ +T + + + + + + F L+ Sbjct: 344 QSEEADDALTDLGAGGSA-GYLLATLTVYA-QSPKHLERDYNETMKLLHEAEFVLMRETI 401 Query: 404 NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRN 463 + + + +P + + N A+ +PL A + R Sbjct: 402 HLLSAWCGHIPGQMKEPVRWMF--------VSGRNYADSIPLRAIRTGSRTNHYLTQQRG 453 Query: 464 Q--------------LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG- 508 + F + + + V G S AGK+ + L Sbjct: 454 EETGALTALETEHRIPYFFNFHETDL----PHGFVIGPSRAGKSVFMMFLASQWNRYAPS 509 Query: 509 FAVVFDMGDGYKSLCENMGGVY--LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNG 566 +FD + G Y L E NP + + + +++ S Sbjct: 510 QVFIFDKDLTCRIPTYLHDGKYLWLGKENTAMNPLSQLDSEEDLTWFASWVETLIESRGY 569 Query: 567 NLDEVHEGLLLQAVRASW--LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIV 624 + E L+ QA + + L + Sbjct: 570 QIKAEDEKLIWQAGKEVMALKEAGETVTLSSFALHLPVH------------------LAE 611 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR 684 L+ + +G F+++E +L A +E+G L + A M I R+ Sbjct: 612 ELEPWVGDGGKASMFDNEEDALSL-ADWTAMEMGQLFNDERAARAFMDYAFYRIYQRL-- 668 Query: 685 TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASS 744 L I+E W +L + + + RT + I TQ++ + SS Sbjct: 669 --DGRPTLIYIEEAWFML--ADERFAAKVNDWLRTLAKKNATLIMATQSLEELAQ---SS 721 Query: 745 AARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVE 804 A + N +I L + +K Q + I + + Sbjct: 722 AFVSMVDNIPNRIFLSNANARASKELYTKRFGLTDAQVERIRTMTPKM-----QYYICTP 776 Query: 805 NHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEM 858 S P A SD + R+ E ++ + E+ Sbjct: 777 KASRMVEAQFPPHVLAYLRSDAKAQKVFNMARESH---PEKWKEVYHDRMQEEI 827 >UniRef50_D1AV72 CagE TrbE VirB component of type IV transporter system n=2 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AV72_STRM9 Length = 850 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 112/861 (13%), Positives = 270/861 (31%), Gaps = 129/861 (14%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGF--MLEA--IPINGANESIVEALDHMLRTK---L 90 + +P+ ++ G+ +N + GF + ++ E V ++ L L Sbjct: 11 KSYKFFVPFESLIED-GIILNKNS-GFQSTFKVRFYDLDYMGEDEVTLINDRLNNAYKRL 68 Query: 91 PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNA--------ITRAYYMKAAATQ 142 P G + + ++ L+ + + ++ + YY+ Sbjct: 69 PDGFSVHFEVQRNKS-DKYPTKNLKGKPYPTQIIDKIREKSVTKDVFYSTEYYITLTYIM 127 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRA------DILEMENLVKIIRASLQGASIT 196 L + +F+ K ++ E ++ V + L+ A+I+ Sbjct: 128 SNDNSEKITKLLDKLSNLFMKNKVKEDSKEELLKIYKNELKEYKDQVLMFIEQLKTAAIS 187 Query: 197 TQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR 256 + + + + + IN + D + +YLT+ Sbjct: 188 AELLKGEELLGFLYSAINMEK----------------REKIRVPVDDTMLLDEYLTVSTL 231 Query: 257 ENGRNS---TARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 NG + + + P+ + + N S++ + ++ + Sbjct: 232 SNGEYTKINDEYVKVITINMFPD--------NVTQRIFNQLESLNFEYRYVTRFIMLSKE 283 Query: 314 KTHSEANLKYM------------DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 + + LE K+ T + E +G + Sbjct: 284 EALEMLKNFKIYFSAKVKTLAQWMLEVKNGTEVQNIDTVALDKVDEADFALNEAKTGVVA 343 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 Y + KD E + ++ F ++N + + LP + Sbjct: 344 YGYYTFSFIIKDKD-LEILDKKINEVRRILNFYDFVAGVDKYNTLDSIFGSLPGNIVNNV 402 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG------LLAPTYR-NQLAFIDIFFRG 474 K ++ ++ L+P+ + L T +L ++++ + Sbjct: 403 RK--------APMNTYLLSALLPMSSLYTGNKINNHLKDVALFTTKTEKELFYLNLHNKD 454 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS--------------GGFAVVFDMGDGYK 520 + + + G +GAGK+ L+ + + L FD + Sbjct: 455 I----GHSLIIGPTGAGKSFLLSMIAANFLKYEGKVLDEYGSSKIKPAQVFFFDKDASSR 510 Query: 521 SLCENMGGVYLDG--ETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQ 578 L GG + D + + F P NI + + ++++ + D ++ + Sbjct: 511 VLTYTSGGKFYDLGKKEIAFQPLKNIHIKSEREWALGWIINILEQERVSYDATTRNIVEK 570 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 A+ + +AK + ++ ++ ++S + + +LD Y N YG+Y Sbjct: 571 ALDSLSIAKVESRTLSNLRTYIASSSKT---------------IASVLDSYCGNNVYGEY 615 Query: 639 FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 F+++ ++ ++ + E+G + +P ++ ++ + IE + ++DE Sbjct: 616 FDNNFDNISNNNFIT-FEMGDVISKPKVISPLLDYIFHKIETE---KLDGTPTVILLDEC 671 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W L KN K+ + I + + R+ + I TQ++ + S A I Sbjct: 672 WIFL--KNEKMRDKINEWLKVLRKKNTSVIFATQSLSEIAD---SPIFSAIVDACKTNIF 726 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV-DPL 817 L N + I +D ++ S +L D Sbjct: 727 LPNEKAMSTWLNLYKKFNLTEKEIQEINNAVMKQDY-----FVKTTEGSRLFQLNPTDIE 781 Query: 818 SRAMYSSDGPDFEFVQQKRKE 838 + +S D + + + Sbjct: 782 IAYLGASTNNDQNTIISLKNK 802 >UniRef50_Q11ZH3 Type IV secretory pathway VirB4 components-like n=1 Tax=Polaromonas sp. JS666 RepID=Q11ZH3_POLSJ Length = 850 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 120/870 (13%), Positives = 251/870 (28%), Gaps = 112/870 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLE--AIPINGANESIVEA----LDHMLRTKLPR 92 + L+P+ + D ++ M E I + + ++ LR R Sbjct: 17 SYPELVPWFGQITPGLVICMDGSLLAMFEYDGIDLQSTEGDQHDQASNSMEIALRAFDDR 76 Query: 93 GIPL--------CIH--LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQ 142 I +V ++ RE G +E + I A+ Sbjct: 77 NIGWFYVDKRRRTFLGAATGENVVARGVDDAWRESVDDGSLSEIRHYIAIAFRPFRGTMG 136 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG---------A 193 F + R I+ SK + I +M+ + A+ + Sbjct: 137 FFDEISSTMMDEHRSLPAAIAKTISSKLRMEKGIEKMQGKIIGATAAFESQISSFMGTLT 196 Query: 194 SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 ++ + + Q + + + +N L Y LN + + L Sbjct: 197 TLNARRLTDQELLCSLSDRVNLATPRTKVSCGPLPSY--LNT-LLVTDTLKRADGGILEF 253 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 G + + + P++ ++ LS+ F + D+ Sbjct: 254 ----VGATRSQFVQMLSVKGLPQVINNEDV--------EALLSLQGDFSVVQQYRFLDRE 301 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKE------------AKEWGELRQRLGSGQSS 361 K + N K+ + F + A++ L + Sbjct: 302 KAKAYINDCEHHYRSSIKSPMTQAFERLSGNESDSIDMGMLALAEDSSAALAELTGDGVN 361 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + + + A +D + I + G+ ++ N + F +P + Sbjct: 362 FGYHTMAVMAIGRDR-RDLDITLKGIAGLYSNLGYGVVREVVNQVGAFCATIPGGGDSTV 420 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL------LAPTYRNQLAFIDIFFRGM 475 + + + G L PT + + + Sbjct: 421 RTSMVSTRNLSDMSLVRSIKSGSSQNEYLTEQLGSPQEALCLFPTTSGVPEYFNFHVGDV 480 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGE 534 + A+ G +GAGKT L+ LI G +V D + ++MGG Y+ + Sbjct: 481 ----GHFAIIGGTGAGKTTLLNLLIMMWQKYRGARTIVIDKDESCFITIKSMGGSYISID 536 Query: 535 TL----RFNPFANITDIDQSAERVRDQLSVM-ASPNGNLDEVHEGLLLQAVRASWLAKEN 589 + NP I + + A+ M N + L+ Q + + + Sbjct: 537 PEKARAKMNPLRWIKNPNSWAKVASWIEGAMSVYGNEAITAQQSTLITQVISQLATREPH 596 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT----------ANGTYGQYF 639 R + + L + ++ L + + Y F Sbjct: 597 RHTLGNFHAQLNGLN---------------QDLAARLAPFVAVAGSANTQSSGSKYAHLF 641 Query: 640 NSDEPSL-----RDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV 694 + E D + ++ +++ L L V+ L + I+ + + Sbjct: 642 DGYEDGFAAQLAADSSGIIGIDVNALLKDEKLAPCVIEYLFMAIDEMIDGLS---PTMIY 698 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 ++EGW LL +N + E RT R+ TQ++ D + K S+ A N Sbjct: 699 LEEGWYLL--QNERFKGVYEDYLRTLRKRRAIIGLATQSVFDIEKVKLSA---AFNDNVR 753 Query: 755 YKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV 814 +I L + + A + D++ + +++ + + + Sbjct: 754 TRIYLPSAKAKSAAKVYIDYLGLTAEHVDVLANAIPKRHY-----MIEQDGRIRLIDVSL 808 Query: 815 DPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 P A SD ++ EG E Sbjct: 809 PPEILAHTRSDPRAKLVFKKLLDEGFEGQE 838 >UniRef50_B9NXT4 Putative VirB4 protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NXT4_9RHOB Length = 758 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 118/805 (14%), Positives = 258/805 (32%), Gaps = 77/805 (9%) Query: 43 LLPYRDYNQESGLFM-NDTTMGFM-LEAIPINGANESIVEALDHMLRTKL-PRGIPLCIH 99 +LPY + + N +G + I + +ES E L L + + Sbjct: 1 MLPYGLVVDDYTISTRNGGLIGAAEITGINADTLDESEFEFLAERYERILRHTSQEIAFY 60 Query: 100 LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYR 159 + + D ++G AE N + +K ++ + Sbjct: 61 IHRLTVPADTGHVITDRDGFAGAVAEALNDAAKQGVLKERKIILSAILQRRKDAKVK--Q 118 Query: 160 VFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDS 219 +F ++ R + +++ + + +L + + ++ G ++N Sbjct: 119 IFGLSGETVGEERRELLDQLDGVFTTLAGTLGDDRVRRLRISEGKWLGYYGMLLNGRYQP 178 Query: 220 LYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAF 279 + + + + ++ + ++ + + + F L PE AF Sbjct: 179 I----VHANIAEPIAFNMPQEDVLFQGKSARIDTVTGQERG-----VRVFSLKSYPEDAF 229 Query: 280 LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP 339 + L + ++T + + + + + ++ + Sbjct: 230 PG---------IFDSLDLPVDMVITQSYLPLSRSQAQEKERVQSGRMRSAGD-------- 272 Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI 399 + + + SG+ S + L+I F E+ I+ S + G + Sbjct: 273 KAKSLEDDLSIFADGIASGRLSSGKHHLSICVFG--TEAELKTAERHIIGSVQIAGGTIK 330 Query: 400 SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV-ANLMPLVADNPLTPAGLLA 458 + + P +++ +F++ +P + P Sbjct: 331 RESLSARAVYFAQHPGNFAFRTRQEMVTDEYFADTVAFHMRPRGLP-ASKLPWPGPLATF 389 Query: 459 PTYRNQLAFIDIF-----FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVF 513 PT + + + N + + V G +G+GKT + L S + G + F Sbjct: 390 PTTQGDRYDLSLHLPKTSDDAENLPSGHTLVLGPNGSGKTVIAMLLATSAVAQGARIIAF 449 Query: 514 DMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDE 570 D ++ +G Y GE NPF TD + + + ++ + S + L Sbjct: 450 DKDHAMEAPLRALGARYTRVRVGEPTGMNPFRTETD-KEGQSWLSNWVTALLSYDDPLSA 508 Query: 571 VHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYT 630 + + + +A+ D + D K D + ++ Sbjct: 509 EQKEEITRGCQANAKLPPPLQTFDSLRDRFKAFDDG-------------RALFKRAGEWA 555 Query: 631 ANGTYGQYFN-SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNL 689 + G F E D + +V ++ + D + +A + +I IE R + Sbjct: 556 SEGRLEWMFGAGGEDPFAADDRHLVFDISEVLDDELVRLAWISYVIRQIERRCA---EKV 612 Query: 690 KKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAA 749 + VIDE W + N E ++ GY T R+ A + +TQ S +AS ++ Sbjct: 613 PTIFVIDEAWVIAG--NEYGAEILKNGYTTFRKLDVAMMMMTQIPDHILSSRAS---KSI 667 Query: 750 WGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW 809 N+S K+ A + Y ++ + + L++ N S W Sbjct: 668 LENTSTKLFFPSRAGDEDDYRKM---GLNDAELSALRA-----HFGDRVMLMKKGNESVW 719 Query: 810 HRLFVD---PLSRAMYSSDGPDFEF 831 + + PL R + SDG F Sbjct: 720 LDVDLSTLGPLLRVLSGSDGKAFPD 744 >UniRef50_A2UVZ8 Putative plasmid-related protein n=1 Tax=Shewanella putrefaciens 200 RepID=A2UVZ8_SHEPU Length = 938 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 140/931 (15%), Positives = 285/931 (30%), Gaps = 122/931 (13%) Query: 8 VTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT--TMGFM 65 ++ A+ SL+ S K E L + P F LLPY Y+ +G F+ + + + Sbjct: 2 ISNAIRSLLGQ--KQPLSKKDVEKLYKRDLPSFPDLLPYTGYDSATGTFILEDGFSRAKV 59 Query: 66 LEAIPIN----------GANESIVEALDHMLRTKLP---RGIPLCIHLMSSQLV---GDR 109 P+ G E + E ++ T+LP + + D+ Sbjct: 60 FTVNPLPTEGRSPKTLVGYREKMKEFIEQTF-TELPLNGGQWVIQQFSFDDPRIHDLADQ 118 Query: 110 IEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL-----RHYRVFISY 164 IE + + + R + + + + R ++ I Sbjct: 119 IEDYAAPHAKGTVYTTAYAEMMRTHLKGISRKAEGIFVDNEVTRAAWRGCYRRTKLVIYR 178 Query: 165 CSPSKKKSRADI---LEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLY 221 + A+ E+ + + +L + + F + N PDS Sbjct: 179 RCTNSDMKDAEFCPAAEVNEICEQAVKTLTSGGYVLKEDTPKEFFGWLIRFFNPQPDSDD 238 Query: 222 PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLR-ENGRNSTARILNFHLARNPEI--- 277 P+ Y + + + +K +G + + L+ R I Sbjct: 239 PE-HYYKTYESILAREADGELPIKGALTEALIGTPPRSDNKNNCWFLDEIPTRFIRIAGC 297 Query: 278 ---AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA---NLKYMDLEKKSK 331 + + + + I C TL V + + + + L K+ Sbjct: 298 RNPPRIGQLTGEVVDGVGENQRIEC----TLDKVPPNSMFASTTIICPQTDFELLLKRQA 353 Query: 332 TSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF 391 + + ++ +E ++ G S V + N + Q ++ Sbjct: 354 DNAVGDSLATARKQEELQQVAAEFGRSDSIVR--NFSGIYVSGKNLTELRKNSQQVVTVL 411 Query: 392 RKNGFELISPRFNH--MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADN 449 G I + + ++ F+ +P + + K N++ Sbjct: 412 SNAGMRPIKEKADSFGLKAFMLSMPMVFNPAMDKGNIYQKPTWAQHVANLS--FAYGRSE 469 Query: 450 PLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGG 508 G +D + +N V G G+GK+ L+ ++ Sbjct: 470 GSGNVGFSFYNRGGSPLSVDPLSKADKTSNSFGLVLGAPGSGKSATANALLAQIMAVHRP 529 Query: 509 FAVVFDMGDGYKSLCENMGGVYLDGETLRFNP-----FANITD----------IDQSAER 553 A + D G+ + + + M L E L ++P A D I+Q+ + Sbjct: 530 KAFIIDPGNSFGLIGDWMERHDLTVEKLSYSPSSKSTLAVFKDAAKLLVDDMAIEQAEQN 589 Query: 554 VRDQ--LSVMASPNGNLD-------------------------------------EVHEG 574 + ++ + S G++D Sbjct: 590 ASNVGDIAELISSEGDIDKLSEPDDDADRDVLGELEIIALIMITGGEKREYEQYMRADRQ 649 Query: 575 LLLQAVRASWLAKENRARI---DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 LL +++ + + I VV+ L +A+ E RS M + + Sbjct: 650 LLRKSIIEAAKDAREQGTITRPSHVVERLASAARGEWGGFDEKRRSAASSMAGGMATWCE 709 Query: 632 NGTYGQ-YFNSDEPSLRDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTPRN 688 +GT+ FNS + DA +V+L++G + + + L+ YI N + + Sbjct: 710 SGTFENAVFNSADGDGIPDADVVILDVGHFSRSGYEAQMATCLTGLLQYINNLAEKEQHS 769 Query: 689 LK-KLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 + L IDE L N + FI K + R+ ITQNI DF + A Sbjct: 770 GRSILLFIDEAH--LVTVNPLLAPFIIKMVKMFRKIGVNPWFITQNITDFP-----AEAE 822 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHS 807 + I++ S +E + Q +MI +D ++ ++ + Sbjct: 823 KLLTMIEWYIVMLASPQEVELIAKY--KSLTEEQVNMITTCKK-EDLKYTEGVILGKKMQ 879 Query: 808 SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 R + +D + + +E Sbjct: 880 EIFRAVPPSTILTLSQTDKEEKTKRAKTMRE 910 >UniRef50_B0K833 Type IV secretory pathway VirB4 components-like protein n=6 Tax=Thermoanaerobacter RepID=B0K833_THEP3 Length = 611 Score = 289 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 99/649 (15%), Positives = 211/649 (32%), Gaps = 74/649 (11%) Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 + N + + +L + + L + DY+ +G + L Sbjct: 4 LKKNKEEAVKEEPELFEKVPTVVEVISPDGYL-IEKDYIRVG--------KKFYRLYVLT 54 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P+ ++ + D + +++ L D ++ K + + Sbjct: 55 DFPQAVYVGWLEDI---------KLLGNVDVSVHLTPVDARDAVNQLTRKITQYQSQYML 105 Query: 333 SYAKWFPS----VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDIL 388 + + K ++ LR+ + + + + + D+ E + + Sbjct: 106 DDQRGNIYELGILRKAVEDLERLRESIQMNRDKLYYVT-AVVSVSADSVEELERSSKILE 164 Query: 389 NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD 448 F + +P + + + S A+L P + Sbjct: 165 EVLAGKSIRARRMFLRQSEAFKSFVPILENHCE-------DLSRNFNSGAAASLFPFASP 217 Query: 449 NPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 G+ D F TNYN+ + TSGAGK+ LI+ L Sbjct: 218 EFSHKKGIPLGINLFTGSPVIFDNFIGPPFMTNYNLGIFATSGAGKSFLIKLLSMRGALL 277 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQSAERVRDQLSVMAS 563 G V D Y + + MGG + T NPF + D++ R D + +A Sbjct: 278 GIKTVFVDPDGEYNRMVQKMGGSVVKISTETENIINPFDVEEEEDENEIRYVDIVQKIAE 337 Query: 564 PNGNLDEVHEGLLLQAV------------RASWLAKENRARIDDVVD------------F 599 + + EG++ + R + A+ + + + Sbjct: 338 IKALVGMIVEGVMKDKISAEELAAVEEAVRDEYEARGINKSPESLYEKNIADSEEFYFKK 397 Query: 600 LKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG 659 K + E R + + ++ + GT G F+ +D+ +V ++ Sbjct: 398 KKEMPTLSSFVERLKKNPRGERIAAVMKPFLKGGTLG-IFDGQTNVSLEDSYLVNFDVSE 456 Query: 660 LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRT 719 + DR L M+ + +I + + KK V+DE W + +K+ F+E R Sbjct: 457 IRDRF-LRTYAMYVITNWIWEKFVKKDVKQKKRVVVDEAWMFMKYKD--TAYFLENLSRR 513 Query: 720 ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLP 779 AR+ + +Q+ F S +A NS+ ++KQ+A + +++ Sbjct: 514 ARKRNTSLTVASQS---FIEFSNSQEGKAVLTNSAAVFLMKQAATDIDSVQEVF--HLSQ 568 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPD 828 +RD + G L V + + ++ + + S++ + Sbjct: 569 GERDFLTSCGVG------EALFLVGRNKTAIKVVASDYEKKLISTNPNE 611 >UniRef50_Q4QPC7 Putative uncharacterized protein n=12 Tax=Gammaproteobacteria RepID=Q4QPC7_HAEI8 Length = 956 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 138/936 (14%), Positives = 298/936 (31%), Gaps = 110/936 (11%) Query: 16 VTALKLPDESAKANEVLGEMSF-PQFSRLLPYRDYNQESG--LFMNDTTMGFMLEAIPI- 71 +T + + + V P F LPY +Y +E G LF + + G + + PI Sbjct: 50 ITPVMRNRKMTREQHVKMLYGRDPSFISNLPYAEYLEEEGVMLFDDAKSAGAVFDIKPIG 109 Query: 72 -NGANESIVEALDHMLRTKLPRGI--------PLCIHLMSSQLVGDRIEYGLREFSWSGE 122 G + + + +++ L + + + + +E LR++ + Sbjct: 110 TEGRSSDYLNRVRTLVKDALQDSFDELDTNPYVVQFYCQDDKDLSGYVE-NLRQYIKTTS 168 Query: 123 QAERFNAITR------AYYMKAAATQFPLPEGMNLP-----LTLRHYRVFISYCSPSKKK 171 + T ++KA L + +R R+ I + + + Sbjct: 169 PEASGSEFTEQWLGEMERHLKAVGKPGGLFVDDRVTNTAWAGKVRKTRMVIYRYAGNNET 228 Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 I ++ ++++ A +T + + + E N NP + Y Sbjct: 229 D--TIEKLNTACDRVQSAFITAGLTMERQNETQIHRWLLEWFNPNPSRYFNGLDDKACYD 286 Query: 232 DLNY---------QCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 L+ Q + S +L G I+ ++ + P++ + Sbjct: 287 LLSLSKDESALPLQDQDFSENLFFTPPESKNGYWYFNEQPHEVIVVDNIRKQPDVGHMTG 346 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 N+ + I+ +T+V+ Q K + + + S Sbjct: 347 EVTRGRNINALFDLLPESTIMAITVVIHPQDKLQAHLDKLSSRAVGNNYESIYL------ 400 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP- 401 ++ + + L G + + KD+ + +++ N + Sbjct: 401 --KQDALTVTEYLKDGH-KLYQAGMVFYVRGKDD-QELRIRSRELRTVLLSNNLVPVKEG 456 Query: 402 -RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAP 459 + ++L LP L K + ++AN++P+ T G+ Sbjct: 457 NEVAPLNSYLRWLPMNFNPQL--DAKSRFYTKYYWVQHIANMLPVFGRETGTGHPGITYF 514 Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMGDG 518 D N + + G +G+GK+ + + ++ + + G+ Sbjct: 515 NRGGSPLDFDPLNPKDRTKNAHKLILGPTGSGKSATLTAQMAQLMAVHRPRLFIVEAGNS 574 Query: 519 YKSLCENMGGVYLDGETLRFNPFANIT-------------DID----------QSAERVR 555 + + L + P +NI DID E R Sbjct: 575 FGLFSDYAERYGLTVNRVSLEPSSNIALPLFSEAHRLLEMDIDLEVQDDDDNEDEGEEQR 634 Query: 556 DQLSVM------------ASPNGNLDEVHEGLLLQAVRASWLA-----KENRARIDDVVD 598 D L+ M A + + + QA+ + + DV Sbjct: 635 DLLAEMELTARLMITGGEAKEDEKMSRADRSAIRQAILLAAEKTSQETPPRQVLTGDVKA 694 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 L+ S + P SRL +M +D + G G++FN E + +A + +++L Sbjct: 695 ALEELSRRQDI--RPERASRLADMAEAMDIFCT-GVNGRFFN-REGEIWPEADITLVDLA 750 Query: 659 GLEDR--PSLLVAVMFSLIIYIENRMYRTPRN-LKKLNVIDEGWRLLDFKNHKVGEFIEK 715 + L SLI +I + + + +N+ DE + N + +F+ K Sbjct: 751 MFARDGYEAELAISYISLINHINSLGEKYQHSFRPIVNITDESHII--TVNPLLAKFLVK 808 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD 775 G + R+ TQN+ DF + + + +L S E + N+ Sbjct: 809 GSKMWRKLGIWLWLATQNMADFPDE-----SDKLLSMVEWWELLNLSNDEVEQVNRFRR- 862 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQK 835 Q+ M+ A D+ ++ ++ N + R+ L A+ ++ + +Q Sbjct: 863 -LSEAQKMMLLSAKKA-DKKYTEGVVLATNMEALFRVVPPSLYLALGMTEKHEKAQRKQL 920 Query: 836 RKEG-LSIHEAVWQLAWKKSGPEMASLEAWLEEHEK 870 E + +A +A ++ L Sbjct: 921 MMEHNCTELDAALMVAKDLDKKRGIAVNDELNSIAA 956 >UniRef50_D1RHP7 Legionella vir-like protein LvhB4 n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHP7_LEGLO Length = 827 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 110/876 (12%), Positives = 246/876 (28%), Gaps = 94/876 (10%) Query: 25 SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANES--IVEAL 82 + + S + P N S G L+ + + E ++ L Sbjct: 1 MSLFKSIKMVRDETPVSNVYPITHLNTPSVFESKSGFQGATLKILGVPFITEEPEVLNQL 60 Query: 83 DHMLRTKLPRGIPLCIHLMSSQLVGDRIE-YGLREFSWSGEQAERFNAITRAYYMKAAAT 141 +H L + I ++ + I G + ++ ++++A + Sbjct: 61 NHQLHQAMLHLDERFIQYVTVHRKKENISLQGTFKSVFAKRVNDKYHARFAGKNLYRNEI 120 Query: 142 QFPLPEGMNLPLTLRHYRVFI-----SYCSPSKKKSRAD-ILEMENLVKIIRASLQGASI 195 + FI S S K R + + ++ ++ ++ SL Sbjct: 121 YLTTVLKGDTSSKAARSLSFIERLKASQNSKGKAILREENLTALQAKMEQLKTSLSPFKP 180 Query: 196 TT-----QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPY-----SDLNYQCVEDSFDL- 244 V + + + N + + P + + L Sbjct: 181 YLLGNNDFDVGYSELLAFLSLIPNGGDTLPFQRPCNYAPIAKSIPEVWKTENLYPDGHLG 240 Query: 245 -KVRADYLTLGLRENGR----NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC 299 + + G + + + S +L+ L + C Sbjct: 241 QYLCNKQIYFGQSIQLQGALSEDVRFAAMLSVKQY--------GQHTASVVLDKLLELDC 292 Query: 300 PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQ 359 +ILT + + N K L + L + S Sbjct: 293 EYILTHSFAPIPREVALDTVNKKREKLINAHDAGV--------SQIAHLSSLEDGVSSQT 344 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 + + + + + E + ++ + ++ +G LI F +P Sbjct: 345 TRLGYHHNTLMLIA-SSKEELEQAIRESIKTYAASGMVLIRETIGQELAFWAQIPTNHH- 402 Query: 420 GLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAG-------LLAPTYRNQLAFIDIFF 472 S N + L G L T + + Sbjct: 403 -------FITRAALITSHNFVDFCSLHNYETGFRDGNHLGAAVTLLETPSKTPVYFNYHS 455 Query: 473 RGMNNTN--YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 R + A+ G + AGK L+ L + + D + K + G Sbjct: 456 RSSKTNPAKGHTAIYGATNAGKNTLVAFLDAQMGRYNNRSFFLDRDEASKIYVLSCGNSS 515 Query: 531 LD------GETLRFNPFANITDIDQSAERVRDQLS-VMASPNGNLDEVHEGLLLQAVRAS 583 +T NP + D ++ ++D L+ ++ + L +L + V + Sbjct: 516 YSVIAPDFAQTTGMNPLQ-LPDTPKNRSFIKDWLAHLVKENDEELPSSISEVLNECVNYA 574 Query: 584 WL-AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSD 642 + + + ++ + + P +R L ++G Y F+++ Sbjct: 575 FDHLEPRYRTLTNISKCMPCN-----FPRWPELRRWLKG-----HDGASDGEYAWLFDNE 624 Query: 643 EPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + L D V ++ L D + + + +Y+ RM + +IDE W++L Sbjct: 625 KDLLCFDFDKVGFDITYLMD--EVSSVISTPVYMYLLQRMRLSLDGRLTSFIIDEAWQIL 682 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 ++ T R+ G ++ +TQ + SS A N + I Sbjct: 683 GSS--FWMNHLKSWLATIRKKNGHFVFMTQTPE---TVVHSSIASDILTNVATTIYFPNP 737 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RA 820 + + Y + + FL++ + +L + LS Sbjct: 738 SATESVYIDKL--NLTHSELAHLKYLTPE----SRQFLVKQGQETMLCKLDLSELSDEIR 791 Query: 821 MYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSG 855 ++S + + E G + + + G Sbjct: 792 VFSGNQMSVRLLDNVIAEVGNNPEVWLPIFLQRSKG 827 >UniRef50_D0Z5G8 Conjugative transfer protein TrbE n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z5G8_LISDA Length = 800 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 120/850 (14%), Positives = 260/850 (30%), Gaps = 122/850 (14%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDT--TMGFMLEAIPINGANESIVEALDHMLRTKL--- 90 S LL + + + D + GF+ + I ++ ++ + + + L Sbjct: 10 GIHGMSDLLNWAALVSDGTILNKDGAFSAGFLYQGIDVSSSSNTDRNDICMRVNNALREL 69 Query: 91 PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE--- 147 G + + + ++ ++ F+ + + R Y+ Sbjct: 70 GSGWMVQVDAIRTKS-EAYVDKNSSYFT--HPLLQLIDDSRRLYFESQGNKFTSTYILIV 126 Query: 148 --GMNLPLTLRHYRVFISYCSPSKKKS--RADILEMENLVKIIRASLQGASITTQTVDA- 202 + + SK+ + + ++ + V + L+ A + + A Sbjct: 127 TYMPPSRRASKLADLVFEKGEKSKQINFAQRNLDRFNSAVDTLATRLESA-CHIERLRAY 185 Query: 203 ---------QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 +F+ + + N + + S + F +V +++++ Sbjct: 186 FDDTCQVWCDSFLSYLSYTVTGNWHPIALPPCPMALDSFIGSVDFLPGFTPRVDKEFISV 245 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 + P +A L +S P+ + + D Sbjct: 246 ---------------ITIDGFPSVAHPQ--------YLAALDDLSIPYRWSTRFIFFDDF 282 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGE--------LRQRLGSGQSSVVSY 365 + + E+K + K + + + + G+S+ Y Sbjct: 283 EAQKLLKTERKKWEQKVISFKDKLLNVADPKIDQAAASMVAQYQLAETAINKGESAYGQY 342 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRK-NGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 I D + E + + R +G N F+ LP + + K Sbjct: 343 SSTIILRHTD-IDELNEQTEYVDKCIRYISGMHCRVETVNATDAFIGTLPSDSVANIRKP 401 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPLTP-----------AGLLAPTYRNQLAF-IDIFF 472 L N+ +LMPL LL + + F +++ Sbjct: 402 L--------LSVDNLVHLMPLNFIWTGNEFCPCPFYPSKSPPLLVASAQGSSVFRLNLHV 453 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL 531 + + + G +GAGK+ L+ L + FD+G +L + GG + Sbjct: 454 DDL----GHTLIFGPTGAGKSTLLATLAAQMNRYENAAIYAFDVGMSMYALSQ-CGGRHY 508 Query: 532 DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGN-LDEVHEGLLLQAVRASWLAKENR 590 D FA ++++D + + + G + H + A+ A N Sbjct: 509 DIGNDTSQ-FAPLSNLDTDFSWCNNFIEQLLVLQGLVIKPTHRTAIYNALMAM--KGSNI 565 Query: 591 ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA 650 + + +N +++ ++ YT NG G + + + Sbjct: 566 KTLSEFRTQCQN-----------------EDVKSHIEYYTINGNGGDLLDGESDEFSLSS 608 Query: 651 KMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVG 710 + V E+ L DR A ++ YI ++ + +IDEGW + KN K Sbjct: 609 -LSVFEIKSLMDRGDTDCA---PVLSYIFRQIELRLKGEPAFILIDEGW--ISLKNEKFK 662 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN 770 ++ T R+ I TQ + + S + KI L S + Sbjct: 663 NMLKDWLLTLRKLNCVVIFSTQLLS---AAIESGILDVLMESCPTKIFLPNSEA-LNIKH 718 Query: 771 QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSR-AMYSSDGPDF 829 Q +I + G K ++ + + S L +D ++ + SSD Sbjct: 719 TYKTFGLSNAQIKLIKE-GTKKRDYY----VVQGSSSRLIDLSLDDIAISVVGSSDKKSL 773 Query: 830 EFVQQKRKEG 839 +++ KE Sbjct: 774 LRIKELVKEH 783 >UniRef50_B9MP37 AAA ATPase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MP37_ANATD Length = 621 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 95/613 (15%), Positives = 197/613 (32%), Gaps = 57/613 (9%) Query: 208 IVGEMINHNPDSLYPKRRQLDPYSDLNYQC-VEDSFDLKVRADYLTLGLRENGRNSTARI 266 ++ M + K+ + S+ N + D + G Sbjct: 1 MMKFMKKFTVKPVSSKQSNISEKSENNRLIENATGLLDLILPDCIEEGKDYIYLGPERYA 60 Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 + +A P +L + N +++ + D + + DL Sbjct: 61 RVYVVAVYPSDIYL----TFFQTFFNIGQ-----ISMSVYIEPADTGDVIRKLSRMITDL 111 Query: 327 EKKSKTSYAKWFPSVE-KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 K + ++A+++ LR L G ++ + T + D+ E E Sbjct: 112 RANIILEGNKPVDYQKLQQAEDFELLRASLQRGIEKILYVQIFFTIYA-DSLEKLKEKCI 170 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 + N + + F +R +L LP K + + + A +P Sbjct: 171 EFKNRCEAYNLKPRALTFRQLRGYLATLPLGLQ-------KHTENYKTMTTGSSACCVPT 223 Query: 446 VADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV 503 G+ F + F + ++AV GT G+GK+ ++ ++ Sbjct: 224 GNTEVYYKNGIFLGYNLTTGAPVFYNQF--DDSLLGPHVAVFGTIGSGKSTTMKTMLARS 281 Query: 504 LDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQ---------SA 551 G +A V D YK L +GG Y++ G NPF + D+ Sbjct: 282 AAFGFWACVLDPEGEYKKLINMLGGKYVEVKAGGKAGINPFDLEIEEDEGKRFINIEGKI 341 Query: 552 ERVRDQLSVMAS--PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL--------- 600 +R L +++ LD + Q+VR + + + + Sbjct: 342 SEIRFLLGIISESFMGKRLDGTQLSKIEQSVRKLYADFGITKDPESLYSNMKVDETGKIY 401 Query: 601 -----KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 K + ++ +L+ +T GT G + + +++ ++V Sbjct: 402 VGKVKKVLPTLSDLRRELSNFEETKQLADVLEIFTGEGTLGLFDCQTDIEIQEHDRIVGF 461 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 L + P L ++ +I N+ R K+ V DEGW +++ +++E Sbjct: 462 NLKEFDKDPFLKFFASVVIMNWIWNKFSHEKMRKYNKIVVFDEGWMFTKYQS--TNDYLE 519 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 R R++ + + +Q I++F + R K +LKQ + + Sbjct: 520 SISRRGRKYHISLMIASQTILEFL---RTETGRTMLNMCHSKFLLKQEPDLAKETATYFG 576 Query: 775 DQFLPLQRDMIGK 787 Q + Sbjct: 577 LSDAAAQFLITAN 589 >UniRef50_C3QQR1 Plasmid transfer protein n=32 Tax=Bacteroidales RepID=C3QQR1_9BACE Length = 905 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 119/845 (14%), Positives = 274/845 (32%), Gaps = 112/845 (13%) Query: 106 VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYC 165 + + G ++F + + + F G P T + I+ Sbjct: 86 IAQTLGEGYAIHKQDIFIRKKFTEESDENREFLSTSYFRYFNGR--PYTDSECYLTITQE 143 Query: 166 SPSKKKSRADILEMENL---VKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYP 222 + D + + ++ + L+ A + + ++ Q + V N Sbjct: 144 VKKSRLFSFDGKKWRDFLVKIRKVHDQLRDAGVQVRFLNRQEVNEYVDRYFAMNF----- 198 Query: 223 KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 V + KV + +++G + S + N L P + + Sbjct: 199 ------------RDKVVSMTNFKVNDECISMGDKRCKVYSLVDVDNVSL---PSVIHPYT 243 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 + ++ + +L I VV +Q+ + L+KK + P + Sbjct: 244 NVEVNNSSMPMDLVSVVSGIPNTEAVVYNQMIFIPNQKRELALLDKKKNRHASMPNPGNQ 303 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPR 402 ++ +++ + +V N+ + + + N F + G + Sbjct: 304 MAVEDIKRVQEVVARESKQLVYTHYNLVV-AMSADTDLHKCTNHLENQFSRMGIHISKRA 362 Query: 403 FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT----PAGLLA 458 +N + F+ P + + A + + + L P + Sbjct: 363 YNQLELFVNSFPGNCYG------MNPDYDRFLTLGDAAACL-MYKERILHSEKTPLKIYY 415 Query: 459 PTYRNQLAFIDIFFRG---MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM 515 + IDI + N N G SG+GK+ + ++R + + G V+ D Sbjct: 416 TDRQGVPVAIDITGKEGAEKLTDNSNFFCLGPSGSGKSFHMNSVVRQLHEQGTDVVMVDT 475 Query: 516 GDGYKSLCENMGGVYLDGE---TLRFNPFANITDID--QSAERVRDQLSVMAS-PNGNLD 569 G+ Y+ LCE +GG Y+ + NPF + +++ + ++ G + Sbjct: 476 GNSYEGLCEYLGGKYISYTEECPITMNPFRINRQELNVEKTGFLKNLVLLIWKGSQGTVT 535 Query: 570 EVHEGLLLQAVRASWLAKEN-----------------------------------RARID 594 + + L+ Q + + N ARI+ Sbjct: 536 KTEDRLIEQVITEYYDTYFNGFDGFTPPQREDLRKSLLIDERNKSGNRAESETELNARIE 595 Query: 595 DVVDFLKNASDSEQYA--------------------ESPTIRSRLDEMIVLLDQYTANGT 634 V+D ++ + E+ + ++ + G Sbjct: 596 TVIDEIERRRKELKVESLSFNTFYEFSVQRIPDICNENSITGIDISTYRYMMKDFYRGGN 655 Query: 635 YGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV 694 + + N + S D +V E+ ++D P L V ++ +M + +K+ V Sbjct: 656 HDKTLNENMDSSLFDETFIVFEIDSIKDDPLLFPLVTLIIMDVFLQKMRI--KKNRKVLV 713 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 I+E W+ + + + E+I+ Y+TAR+ + +TQ I D + A NS Sbjct: 714 IEEAWKAI--ASPLMAEYIKFMYKTARKFWASVGVVTQEIQDIIGSEI--VKEAIINNSD 769 Query: 755 YKIILKQSA--KEFAKYNQLYPDQFLPLQRDM-IGKFGAAKDQ-WFSSFLLQVENHSSWH 810 ++L QS + F + + ++ I + + + +F ++ S + Sbjct: 770 VVMLLDQSKFRERFDTIKAILGLTDVDCKKIFTINRLENKEGRSFFREVFIRRGTTSGVY 829 Query: 811 RLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGPEMASLEAWLEEHE 869 + Y+++ + E ++ + E S EA+ + ++ + ++ Sbjct: 830 GVEEPHECYMTYTTERAEKEALKLYKAELQCSHKEAIERYCADWDASGISKSLPFAQKVN 889 Query: 870 KYRSV 874 V Sbjct: 890 AAGKV 894 >UniRef50_A8PLL0 ATPase n=1 Tax=Rickettsiella grylli RepID=A8PLL0_9COXI Length = 823 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 135/887 (15%), Positives = 272/887 (30%), Gaps = 111/887 (12%) Query: 20 KLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT--TMGFMLEAIPINGANES 77 K S + + LL Y ++ + D + F A + ++ Sbjct: 5 KEKQRSPTKQAIFYRRKHRGLNDLLSYLIQLDDNTILHKDGAISRHFKYIAPDLESSSSH 64 Query: 78 IVE----ALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA 133 ++ L L G ++ + + + + + + + R Sbjct: 65 DLDFHAKTWADSL-GFLGNGW-----MVETNVASEIFNNYAKPQVFPEVISALIDDERRM 118 Query: 134 YYM---KAAATQFPLPEGMNLPLTLRHYRVF-ISYCSPSKKKSRADILEMENLVKIIRAS 189 Y T + L R F I + + + + ++ Sbjct: 119 QYQGQCYFKTTHYLSITWKPEQLIESKLRYFAIEGDIKRESGFETQLKQFDKKLQEFTGF 178 Query: 190 LQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD 249 L+ + + + I + I + L R + + Sbjct: 179 LKRSLVNLSPLINNELITYLHNCITGDSHQLVMPRTGAFLDAYVAE-------------- 224 Query: 250 YLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVV 309 R + I + P ++ +L + T + Sbjct: 225 --AFQGGFEPRIAGKYIKVLAIDDLPSYSYP--------CILEALSYFPIEYRWTSRFIC 274 Query: 310 EDQVKTHSEANLKYMDLEKKSKTSYAKWFPSV---EKEAKEWGELRQRLGS-------GQ 359 D++ + + K+ S+ + + +L + GQ Sbjct: 275 LDRLTAKAYLKRYERNWSSKAIGVMGVIRESLGLEARRDDDAQATVNQLKTAQIENSAGQ 334 Query: 360 SSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGK 419 S Y N+ D + ++ QDI+ ++ F + N +L +P Sbjct: 335 ISYGFYNSNLILIHND-KKFLEKISQDIIAKIQQLDFRVRDESLNAAEAYLGSIPCHGDY 393 Query: 420 GLFKQLKEAGVVQRAESFNVANLM------PLVADNPLTPAGLLAPTYRNQ-LAFIDIFF 472 L K L++ + A F V++L P D A LL + +++ Sbjct: 394 NLRKMLQDTQFIAHA--FPVSSLYQGESKSPCKKDGYNDQAPLLLTATKGSRPFMLNLHI 451 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYL 531 + + A+ G +G+GKT L L+ S G +V D ++ ++GG Y Sbjct: 452 GDV----GHTAIVGPTGSGKTTLNAMLMASHRKYPGSRIIVLDKDQSNRTAILSLGGQYF 507 Query: 532 DGETLRFNP--FANI-TDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAK 587 D E+ +F A I D + E+ + LS G + + LL +AV L Sbjct: 508 DLESDQFQLGVLARIHPDNPEQIEQAIEWLSDCCRVQGVTVTPARQKLLREAVERLSLDA 567 Query: 588 ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 ++ +D + + P +R + +G Y + N EP+ Sbjct: 568 QSYKNLDHLS------------LQDPVLREAISSF--------NSGQYRRLLNGTEPAFS 607 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKN 706 ++ E+G L V +I I N + + L +++E W L Sbjct: 608 -GGDILGFEMGSLVKADMHARDVAIPVIKAIFNELEQLFKDKRPTLLILEEAWLYLRH-- 664 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 + ++T R+ + I I+Q++ D S AA + ++ L E Sbjct: 665 PLFRNKLTDWFKTLRKSNVSVIFISQDLDDIVK---SEAASLIQTSCMTRLYLPNKKAEE 721 Query: 767 AKYNQLYP-DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SS 824 + Y Q +I + +D ++ Q E + RL + L++A S Sbjct: 722 SHIANQYRAFGLNEQQITIIKEATPKQDYYY-----QSECGNRLFRLDLGDLAQAFLCIS 776 Query: 825 DGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEEHEKY 871 + + + + + L+ V K L W EK+ Sbjct: 777 EKSESDHFNKLYQ--LNDPRWVLDWLTYKG------LNEWRSFAEKH 815 >UniRef50_A9L6R4 CagE TrbE VirB component of type IV transporter system n=1 Tax=Shewanella baltica OS195 RepID=A9L6R4_SHEB9 Length = 808 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 117/854 (13%), Positives = 249/854 (29%), Gaps = 122/854 (14%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTM--GFMLEAIPINGANESIVEALDHMLRTKL-- 90 S LL Y + + D ++ GF+ + I+ + +L + L Sbjct: 9 TSIKGMPDLLNYGILCDDGVVANKDGSLMAGFVFRGVDISSSTFGDRNSLADSISDLLVS 68 Query: 91 -PRGIPLCIHLMSSQLVGDRIEYGLRE----FSWSGEQAERFNAITRAYYMKAAATQFPL 145 G L + + + + F+ E+ + + Y + Sbjct: 69 FGTGWMLHVEAVRQKTAEYLNKENSHFSHPMFAAIDEERHDYFSRVAERYESSYFMFVTY 128 Query: 146 PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ-- 203 +R + K + + + ++ I + LQ I+ + + A Sbjct: 129 MPPSKAQAQIRDW--MFEDSLDKKSLFSKHLDDFQRKLRDISSRLQSY-ISIRRLLAYKA 185 Query: 204 -----------AFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + + M+ N + + S + K+ Sbjct: 186 RNDEGETHYYCELLQKINLMVTGNDRPVRLPFCPVGIDSLIGAHEFWTGMSPKLN----- 240 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 I + P+ + N+LN + + + D Sbjct: 241 ----------DQYIATIGIDNFPDESSP--------NILNHLDKLGFAYRWSSRFAFFDL 282 Query: 313 VKTHSEANLKYMDLEKK--------SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVS 364 + + + +KT K K ++ + L G Sbjct: 283 FDAEKALEKERKTWKSRVISFKDVLAKTPNPKINEDAAKMVWQYEQALN-LARGGKLKYG 341 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 ++ ++ E E + I+ + + GF N + FL LP + + + Sbjct: 342 HYTPAIIVMNESREYLAECCEKIVKTIDQLGFGCRVETVNSVETFLGSLPSDSLHNVRRP 401 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPL------------TPAGLLAPTYRNQLAFIDIFF 472 L + N+ +++PL + +PA + +++ Sbjct: 402 LVN--------TVNLGHMLPLSSIWSGRLTNPCPFYPPNSPAVMQCSAEGAAPFRLNLHI 453 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYL 531 + + V G +GAGK+ L+ L+ + VFD G + + GG + Sbjct: 454 DDL----GHFLVFGPTGAGKSTLLATLVAQTNRYANRKQFVFDKGRAAYPISQ-CGGTHY 508 Query: 532 D---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE 588 D E + F P +++ A ++ N + + +R + Sbjct: 509 DICVDENVTFAPLSHLRT--DFAWCCNYIEKLLELQNVFISAKQRNGIENGLRELTASNI 566 Query: 589 NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD 648 I D + + ++ L+ YT++ G NS + S + Sbjct: 567 KDINISDFLHI-----------------ANDTQITDALNFYTSDSA-GNLLNSRKDSFK- 607 Query: 649 DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 + + V E+G L R + M +++YI ++ R+ +DE W + F + Sbjct: 608 SSTLNVFEIGELMKRGTKE---MIPVLLYIFRQIERSLDGSPGFIFLDEAW--VAFGDPV 662 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 + + +T R TQ++ D S KI L A + Sbjct: 663 FKPMLVEWLKTMRTANCVVGLFTQSLTDAIK---SGILDVLIEACPTKIFLANPAADADV 719 Query: 769 YNQLYP-DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY-SSDG 826 Y Q D+I + K + + + L + L+ A SS Sbjct: 720 IKPTYKSFGLNDRQIDIIKRAVRKKHYY-----ITSPEGNRLFDLALGELTLAFVGSSSK 774 Query: 827 PDFEFVQQKRKEGL 840 ++ + Sbjct: 775 QHIARIKTLVGQHQ 788 >UniRef50_C8WNA5 Type IV secretory pathway VirB4 protein-like protein n=2 Tax=Coriobacteriaceae RepID=C8WNA5_EGGLE Length = 815 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 117/798 (14%), Positives = 248/798 (31%), Gaps = 98/798 (12%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E I L L P + + ++++ + + I + + R Sbjct: 85 EQIFTTLSS-LYNYFPAESSVQLTIVNTPIPRELIGKKVFFEPNDERTLGYVDEYNRILN 143 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 K L R F++Y P+ + A + ++ ++ I ++L Sbjct: 144 DKMCEGVSNLVR-----------RRFLTYSVPA-ESVEAAVPKLSHIRSDIASTLARIRC 191 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + Q ++ + ++ + + + D+ G Sbjct: 192 DAAPLGGQERLEAISTLVRPGHTPSCDWDKLSQHPRLRTKDLIAPNLM-----DFAPAGR 246 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 + L + + L + + P +++ + Q + Sbjct: 247 ADAVEIDGMYASVLTLRDF--------GSVLEDHYLASIIDLPIPLAVSVHIAPIVQSEA 298 Query: 316 HSEANLKYMDLEKKSKTSYAK----------WFPSVEKEAKEWGELRQRLGSGQSSVVSY 365 + + ++K+ P + +E EL L + + Y Sbjct: 299 IALVKRQIDWMDKEIIDEQTTAAKKGFSQSILTPEIRYAKEEAEELLDFLRNKNEHLFEY 358 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 I + D+ E + + + N + S F + LP Sbjct: 359 TGLIYTYA-DSLEALDRQVAQVKSIAQGNSIAVASLDFRQRPALNSVLPLGRNH------ 411 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNYNMA 483 + + +A MP + G L + + Sbjct: 412 --LEFTRYLTTGQIAMQMPFASLELNQEGGGYYGQSKQSGNLVICN----RKLLASPMGF 465 Query: 484 VCGTSGAGKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRF 538 VCG G+GK+ ++ I + + +VFD Y +L E +GG + R Sbjct: 466 VCGKPGSGKSFSVKREITNTVLAHPEDQIIVFDPAGEYPTLIEALGGSNIAFSPDSPTRL 525 Query: 539 NPFA-----NITDIDQSAERVRDQLSV----MASPNGNLDEVHEGLLLQAVRASWLAKEN 589 +PF N+ Q A ++ L++ MA + L E + ++ + V A++ + Sbjct: 526 SPFDRSDVANMATTSQMAFKIDAFLALSSAMMAEGDEGLPEADKSIITRCVEAAYAKRGG 585 Query: 590 R--ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 + D + LK + E ++ + ++Y +G F + + ++ Sbjct: 586 DGTPTLSDFYEILKAQPERES-----------RDIALRYERYV-SGPLS--FFNCQSNVT 631 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKN 706 D ++V ++L L + V M + + + NRMY R + IDE L Sbjct: 632 FDERIVNVDLHELSSS--MRVFGMLTALEAVRNRMYANYERGVTTWLYIDEVQSLFGH-- 687 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 + E+ K + R+ ITQN + + AR NS + ++ KQSA + Sbjct: 688 PAIIEYFTKFWAEGRKFNLIATGITQNSTYMLAHED---ARNMVLNSDFVLLHKQSALDR 744 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP-LSRAMYSSD 825 + L + I A LL R ++++ Sbjct: 745 KSWVDLL--SLSATEAGYIDDTVKA-----GEGLLVAGGVRVPIRDDFPKGALYDLFNTK 797 Query: 826 GPDFEFVQQ-KRKEGLSI 842 + +++ R+EG + Sbjct: 798 ATEIAELKRKARREGAGL 815 >UniRef50_C6I0M0 Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0M0_9BACT Length = 832 Score = 285 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 140/807 (17%), Positives = 263/807 (32%), Gaps = 78/807 (9%) Query: 86 LRTKLPRGIPL--CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI-TRAYYMKAAATQ 142 R + G P L S E G E + ++ E F + TR ++ A Sbjct: 74 FRVEFRHGTPSERSFLLPSGPSPFVWNEEGTGEILLAEDKNEDFGSRPTRKRHLSLAIVG 133 Query: 143 FPLPEGMNLPLTLRHYRV-----FISYCSPSKKKSRADILEMENLVKIIRASLQGASITT 197 + P+ L L H+ + K+ + E+ + + + A L GA + Sbjct: 134 Y--PDHERHRLRLSHFPRGGASPVPKGREETPKRRDERLREIRQIEETVLALLPGAGMEG 191 Query: 198 QTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE 257 + + + + N LD + + + F + L Sbjct: 192 SSPGEEELLAHLAGRANPGL-------LALDGFREDARGPLPPLFQTTFQEFPGELKAYR 244 Query: 258 NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS 317 L + P +A LTL L D+ Sbjct: 245 PDGEV-LWGRFHALRQLPAAFHRETLAPILEGP-------DFDCDLTLNLFKPDRALASR 296 Query: 318 EANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG-QSSVVSYFLNITA-FCKD 375 L + +E E + + L G + LN+T + Sbjct: 297 AIQSNST-LNRFLTLLLPGKSYRLESVIAEQEDCLKTLHEGPEEESAPLLLNLTLGYWHS 355 Query: 376 NNETALEVEQDILNSFRKN-GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 + + Q+ L +F + G + + F + P ++ Sbjct: 356 DKRRLSGMGQETLRAFSEADGALCAAEPYRQWPLFRSQFPADGCANDRWEV--------V 407 Query: 435 ESFNVANLMPLVADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKT 493 + A +P+ P +R + +D + R N N V G SG+GK+ Sbjct: 408 TAAQAARFLPVWDKFPDMERPWFFAKNHRQEPVSLDFWSRE--LPNANGLVIGRSGSGKS 465 Query: 494 GLIQPLIRSVL--DSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDID 548 ++ L+ L AV+ + G ++ LC GG Y+ + NPF D+ Sbjct: 466 FGVKMLLHQYLLASPDHHAVIVENGGDFERLCAFFGGDYVRVDLSGNFSLNPFPLKEDLA 525 Query: 549 QSAE--------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA---KENRARIDDVV 597 + + + + +H G+L Q + + + R + D+V Sbjct: 526 REGGLYDPDWMGFLVALIETFLITAHPVTPLHRGILGQCLGDLYDRLPYAQGRPSLSDLV 585 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 L + + E +R M L+ + + G Y FN+ + R ++++ +L Sbjct: 586 RTLFSFRGRDAEDEENAVR-----MAKTLESW-STGLYAPLFNNPQ-GFRPRSRLLAFDL 638 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 GL+ + +L V + +++R +N + V DE RL+ + F+E Y Sbjct: 639 SGLDRQEALRGIVFAFIAGLSMEKLFR-EKNRRLYFVYDEAHRLMTQFSGTG--FLEHMY 695 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS--AKEFAKYNQLYPD 775 RTAR+ G + ++Q+ D+ + GNSS+K I S + + + Sbjct: 696 RTARKFGGGVVAMSQSPEDWLGESREG---GILGNSSWKWIFPCSVLPETYRRI------ 746 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQK 835 + +I + FS L + RL PL M + + + Sbjct: 747 GLSERETRIIDSLDFVRGD-FSECYLSMGTRRGILRLEPSPLEYWMAARSPEEDRLFARA 805 Query: 836 RKEGLSIHEAVWQLAWKKSGPEMASLE 862 +E S+ EA+ LA + E Sbjct: 806 LEEEGSVREALLALARESRQKREGEEE 832 >UniRef50_Q5ZW33 LvhB4 n=5 Tax=Legionella pneumophila RepID=Q5ZW33_LEGPH Length = 826 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 117/887 (13%), Positives = 257/887 (28%), Gaps = 123/887 (13%) Query: 25 SAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTM--------GFMLEAIPINGANE 76 + + + S L P + +F + + + G E N Sbjct: 1 MNLSKTLKHVYQEAKVSDLFP-VTHLNSPSIFESQSGLVGSVIKVNGAAFEIEEAETLNH 59 Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 L L L + + ++ I GE F +Y Sbjct: 60 QSF-LLHQAL-VSLDSRFIIYVTTHRQKISCPLI----------GEFKPGFAKDLDEHYQ 107 Query: 137 KAAATQFPLPEGMNLPLTLR-----------HYRVFISYCSPSKKKS---RADILEMENL 182 + + + + + L+ + +S S+ +I + + Sbjct: 108 QRFKDKNLYKNTLYITIVLKGDDSSKTGSWLQWAKSLSMKGNSELSEHHREQNIQILNRV 167 Query: 183 VKIIRASLQGASITTQ------------------TVDAQAFIDIVGEMINHNPDSLYPKR 224 V+ ++A+L T V+A I + + + P+ Sbjct: 168 VEQLQANLNPFGATILGKQDEALGFSELLQFLGLVVNAGQTISFKHPVYSPPIANSIPQS 227 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 + + + S + + + + L + P Sbjct: 228 FRQEAKYPEGHLGQYLSSCQLLFGECIQFQGNTQKDCVFGAM--LSLKKYPT-------- 277 Query: 285 DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKE 344 + S LL+ LS+ C FI T T + + + K L + ++ Sbjct: 278 NTASILLDSMLSLDCEFIATHTFAPIGRDSALNMISKKRSKLLSAEDKALSQTTA----- 332 Query: 345 AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFN 404 +L + S + ++ + + + + +G ++ Sbjct: 333 ---LSDLEDGIASETLLLGAHHHTVMLLAPNKP-LLDTAILEATKRYGASGIVVVKETLG 388 Query: 405 HMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMP-------LVADNPLTPAGLL 457 F + LP L S N + P +N L A L Sbjct: 389 QEPAFWSQLPCNQHFITRASL--------ITSQNFVDFCPLHNTQTGFSNENFLGGAVTL 440 Query: 458 APTYRNQLAFIDIFFRGMNNTN--YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM 515 T + + RG + A+ G + AGKT L+ L + GG + D Sbjct: 441 LETPSKTPVYFNYHARGSKTNPSKGHAAIFGGNNAGKTTLVNFLDAQMGRFGGRSFFIDR 500 Query: 516 GDGYKSLCENMGG-VYLDGE---TLRFNPFANITDIDQSAERVRDQLSVMASPNGN--LD 569 + K G Y+ E + NP + D ++ ++ L+ + + Sbjct: 501 DESSKIYVLASGNSSYIKIEPSNPIAMNPLQ-LPDTSENRSFLKLWLATLVQEESECVIP 559 Query: 570 EVHEGLLLQAVRASWLA-KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 ++ + S+ + + FL + P ++ L + + Sbjct: 560 SQIAEIINDCIDYSFEQLAPEFRTLSHLSQFLP-----VDFPRWPHLKRWLKQNDSRI-- 612 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 +G + F++ +L D V ++ + D + + + +Y+ +RM + Sbjct: 613 ---DGEFHWLFDNPNDALNLDFDKVGFDVTYMMD--QVHSVIATPVYLYLLHRMRQCLDG 667 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 +I E W+L F + + + + T R+ G +I TQ+ S Sbjct: 668 RLTSFIIAEAWQL--FASPFWEKALREWLPTIRKKNGHFIFDTQSPKTITD---SPIKHI 722 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS 808 N + I + Y + Q + I + FL + ++ + Sbjct: 723 VLDNLATLIAFPNPLADKETYMEHLK--LTEAQFEAIKENTPESRI----FLYKQDHKAF 776 Query: 809 WHRLFVDPLSRAM--YSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWK 852 +L + LS+ + S++ + + +E G + + Sbjct: 777 LCKLDLSGLSQYIRVLSANTQSVKLLDDIMQEVGHDPELWLPVFYER 823 >UniRef50_A5KS14 Type IV secretory pathway VirB4 components-like protein n=7 Tax=candidate division TM7 RepID=A5KS14_9BACT Length = 625 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 108/595 (18%), Positives = 212/595 (35%), Gaps = 80/595 (13%) Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 R T ++ P + + L+ ++I +++ + + + Sbjct: 53 RLGTKYCRTMYVYAYPRQIY--------TGWLSSIINIDEVIDISMFVYPVESQVILNNL 104 Query: 320 NLKYMDLEKKSKTSYAK---WFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDN 376 K LE + K P VE ++ ELR ++ G Y L +T + D Sbjct: 105 RKKVTQLEASMNINAEKGKVRDPQVEAAIQDAEELRNQIQVGSERFFRYGLYVTMYA-DG 163 Query: 377 NETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAES 436 E ++ I + + + P M+ + + + + Sbjct: 164 LEELNFIQHKIETILGQQLVFSKVASSQQEQGMNSTFPQMSDQLQIR--------RNMNT 215 Query: 437 FNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTG 494 ++ P + + G+L + N L D F N NM V SGAGK+ Sbjct: 216 GAISTSFPFTSADLTQEKGILYGVNMHNNGLVIFDRF----TLENANMVVFAKSGAGKSF 271 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG---ETLRFNPFANITDIDQSA 551 ++ + G ++ D + Y+ LC+ +GG Y+ R NPF ID Sbjct: 272 TVKLEALRSMMIGTDVIIVDPENEYQRLCDAVGGSYVRLSLNSDTRINPFDLPQVIDSED 331 Query: 552 ER---------VRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENR----------A 591 + L +M + L E L QA+ ++ Sbjct: 332 ADDALRANLVTLHGLLRLMLTNAAVLLTPNEEADLDQALIDTYARAGITSDPLTHQSPPP 391 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 I D+ + L + S + L +YT +GT+ F S + ++ + Sbjct: 392 TIGDLYETLLHMGGSG------------PSLAQRLRKYT-SGTFAGIF-SQQSNVDINNN 437 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 MVV + LED L M+ ++ +I N++ + + ++DE W+L+ + + Sbjct: 438 MVVFNIRDLED--ELRPVAMYIILSHIWNKVRTEQKKR--MLIVDEAWQLMKYDD--SAN 491 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 F+ + AR++ TITQ++ DF S RA NSS +++LKQS+ + Sbjct: 492 FMFSLAKRARKYYLGLTTITQDVEDF---MGSKMGRAIVANSSMQLLLKQSSSAVDVLSD 548 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 ++ +R + F + +F + ++ + + +++ Sbjct: 549 VFK--LTEEERKRLANFPVGQGLFF------AGQNHVHIQVIASQTEQGLITTNP 595 >UniRef50_UPI00004A2EB8 VirB4-like protein n=1 Tax=Moraxella bovis Epp63 RepID=UPI00004A2EB8 Length = 828 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 117/855 (13%), Positives = 250/855 (29%), Gaps = 110/855 (12%) Query: 47 RDYNQESGLFMNDTTM-------GFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIH 99 R + E + + G EAI N ES +AL+ ++ T+L + + Sbjct: 23 RHHVAEDVIDFETNYLCSVIEFDGISFEAISTNHL-ESDFDALN-LVYTELAKDKAGSLA 80 Query: 100 LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYR 159 + QL ++ + + F + H Sbjct: 81 FHTYQLRRK--TEVTSDYEFDNKFCGDFAKKYLQRFNDKDYY---------------HTS 123 Query: 160 VFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVD-------AQAFIDIVGEM 212 ++ A I +++NL K I + L T + + E+ Sbjct: 124 YYMCLVMKYDNDLEAGIDDIQNLNKRILSMLSQYQPRVLTTYQNNQGILSSEPFEFFYEV 183 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 +N P + P + + S L + L + G L Sbjct: 184 LNGE-----PPVGGIVPLTPSPAYEILPSSTLHFGHEILQI----KGEVKNRFACLQDLK 234 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P L + L++ + L + V K + + + Sbjct: 235 DFPNRTHLGLFD-------SASLALPFEYNLVQSFVALAPAKALTRIERQANQMRSADDK 287 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF- 391 + + +E E + + SG+ + Y ++ F D + A+ + SF Sbjct: 288 AV--------HQREELLEAQGFITSGEQILGEYHCSLMVF-GDTIDQAVNNVNEANASFS 338 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL 451 K G + F + P LK + + S + + + Sbjct: 339 NKAGAVFKKASVSAPATFFSQFP-TYRYKPRPMLKTSRNLASTFSLHNYSTGKAHGNPLG 397 Query: 452 TP-AGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRSVL 504 A + T L + F + N + + G +G GKT L + V Sbjct: 398 DGSAVVPLETVAKTLYNFNFHFTNIGENNVGEAVAGHTLILGATGTGKTTLQSAMTVFVQ 457 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSVM 561 D G + G Y + + NPF D + + + + Sbjct: 458 RFNPAMFCLDKDRGMDIFIRALDGDYFAIEENKPTGINPFQ-FEDSPRLRDFLNTLVVAC 516 Query: 562 AS-PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 A+ N + + AV R+ ++ L + + Sbjct: 517 ATDKNHECTSEEQNQIKMAVDTVMSLPFEYRRMSAILQSLPDKGG--------------N 562 Query: 621 EMIVLLDQYTA-----NGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVAVMFSL 674 + L ++ G Y ++ D K+V ++G + + + Sbjct: 563 SLYARLVKWCTTDDYGQGAYAWVLDNPVNQFNPDDFKIVGFDVGSILKENYQPTEPLLAC 622 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 ++Y+++ M + + L V++E W L +K + + + +T R+ + +TQ+ Sbjct: 623 LLYLKSEMTKN--HPLLLTVVEEFWLPLKYKTPR--DMMLDVLKTGRKRGEFMMLVTQSP 678 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN--QLYPDQFLPLQRDMIGKFGAAK 792 + S A + KI+L E+ + ++ Sbjct: 679 EEAVQ---SEIFPAIIQQTPTKILLPNPDAEYKNEQGGGYIRVGLTEKEFAILKSLSTQS 735 Query: 793 DQWFSSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPDFEFVQQKRKEGLSIHE---AVW 847 FL++ SS+ ++ + S ++ SS + E + + + + Sbjct: 736 RI----FLIKQGQQSSFAKMDLYGFSDEISVLSSTKENVELLDNLLSKFDEKPKSEIWLP 791 Query: 848 QLAWKKSGPEMASLE 862 + + +L+ Sbjct: 792 LFYQARKDRKQGTLD 806 >UniRef50_C3WQT8 Conjugal transfer protein trbe n=2 Tax=Fusobacterium RepID=C3WQT8_9FUSO Length = 823 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 113/836 (13%), Positives = 246/836 (29%), Gaps = 102/836 (12%) Query: 36 SFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHM--LRTKLPRG 93 Q L + + + D ++ + + + ++ + L R Sbjct: 28 RRDQVIDHLAWAYLLDDGIILNKDASLQKTFKIRGKDLESMEQMDLVHQRYSLNNAFRRM 87 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 + + + S ++ E + + + Sbjct: 88 NGSWAIFIEQKRTQSAPYTASKFSSLILQKIEDIREKKYNSGKYYESEYYLTFVWLPPND 147 Query: 154 TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMI 213 + + +K + E + VK ++ ++ Q + + Sbjct: 148 RVSTLKDKFIQEEKEEKDENKYLEEFKEQVKEYVNLIKNEFSEISELNDQETLTYLHSTF 207 Query: 214 NH-NPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 + + ++ P R + S ++ + D F KV +Y+ IL F Sbjct: 208 SQYDKQTIVPLRSDILLDSYISDTPIVDGFRPKVGDNYI----------GAISILAFAGE 257 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P + N T + D+ + ++ + + Sbjct: 258 SFP-------------GMFNEISKAGVECRWTSRFIFYDKEDSIKISSKVKGRWGNRKRK 304 Query: 333 SYAKWFPSVEKE------------AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 ++ K+ +E ++ L + S+ + K N E Sbjct: 305 TFTSLEEKALKKPLEDDDYEAIMAEEEMKDILSMLQNDLISLGKFTFTAIVRNK-NKEQL 363 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 + +++ ++ GF + N ++ F +P + K S Sbjct: 364 EKDLDIVMSIVQQRGFTAVKENVNTLQAFFGSIPGDFRHNVRK--------VPLPSMTAI 415 Query: 441 NLMPLVADNPLTPAG------LLAPTYRNQ---LAFIDIFFRGMNNTNYNMAVCGTSGAG 491 +L P+ + L + + R + +MA+ G +GAG Sbjct: 416 DLFPINSMWCGERENKHFNAPALFYANSGTGYNSVYFNTHVRDV----GHMAMYGRTGAG 471 Query: 492 KTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG--ETLRFNPFANITDID 548 K+ L+ + S +FD G + L GG + D + L F P A I D Sbjct: 472 KSTLLCFIAASFKKYADSQVFIFDKGGSTRVLTAATGGKFYDLGRDNLSFQPLAKIDDRL 531 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQ 608 + + N L + + +A+ + EN+ I L+N Sbjct: 532 ERNWAYEWLCEIYEQENVILTPELKDAISEALNSLIDVPENQRTITKFQILLQN------ 585 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 + + + YT +G +G YF+ + + V E+G + + + Sbjct: 586 -----------NTLRSAIRPYTTDGPFGNYFDGTKDFFNSEYSWQVFEMGKVLESKVVAP 634 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 ++ + +E M ++DE W++L ++ + + +T R+ + I Sbjct: 635 PLLKYIFHKLETIMLT--EGKPTQIILDECWKVL--EDPNFVKKFKDWLKTMRKLNVSVI 690 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD-QFLPLQRDMIGK 787 TQ I D SS + + I L + ++LY Q ++I + Sbjct: 691 FATQEITDILE---SSIKNTLKSSVATTIYLANKKAQTTFDSELYKSLGLNLKQIELISR 747 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDP----LSRAMY-SSDGPDFEFVQQKRKE 838 +D + S L P A + S+ D + E Sbjct: 748 LRMQRDYY---------AVSDIGNLDFTPDFSEFELAFFGSNSPQDQSKCVEIETE 794 >UniRef50_A3EW83 Putative uncharacterized protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EW83_9BACT Length = 834 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 137/842 (16%), Positives = 257/842 (30%), Gaps = 96/842 (11%) Query: 68 AIPINGAN-----ESIVEALDHMLR---TKLPRGIPLCIHL---MSSQLVGDRIE-YGLR 115 ++G N +S VE + LR LP G L + + GD + R Sbjct: 36 LYRLSGVNLFVRPDSAVEQVYQGLRLFLHHLPEGWGLQFRVRTRIGVPADGDVLAPRWCR 95 Query: 116 E-------FSWSGEQAERFNAITRAYYMKAAATQ------FPLPEGMNLPLTLRHYRVFI 162 E A + + T+ PE + + Y Sbjct: 96 EPFAGSPSSREEDPPAWYLGERHHHFLNRTLRTRELTLALISFPEKEKIRVRPSFYPRRE 155 Query: 163 SYCSPSKKKSRADILEMENLVKI---IRASLQGASITTQTVDAQAFIDIVGEMINHN-PD 218 S+ PS+ M +L+ + L G I + +D + + ++N + P Sbjct: 156 SFTRPSRFLRGTHEKRMADLLDTGALLEQLLPGGGIEAERMDGTGLREHLSAILNPSLPT 215 Query: 219 SLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIA 278 L+ DP L+ + D L + G L P Sbjct: 216 RLWSPSP--DPRMTLSEELAH--TSFTETPDGLVARHPDGGVLHG---RMQSLRSWPSDP 268 Query: 279 FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK---YMDLEKKSKTSYA 335 +A L L L + KT L Sbjct: 269 DRDTLALF-------LEEADFSHDLVLNLWKPPRKKTLDAVQSHMTVSRFLGLLLPGRSY 321 Query: 336 KWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN- 394 + + + + G + +F DN E+ Q++ ++ Sbjct: 322 RLENDQRQRERFLEAAFEDDREGGDPFAVHLC--LSFWSDNESDLTEMGQELFRAYSSVP 379 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPA 454 G L + FL+ LP + S ++ +P+ +P Sbjct: 380 GTLLAHEPYRQWPLFLSGLPLQTDACDRWE--------TILSGSLPLFLPVWDKSPDDEN 431 Query: 455 GLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSG--GFAV 511 + ++ +D + N+N + G+SG+GK+ + L+ L A+ Sbjct: 432 PWFWSHNHLDEAVGLDFWN--PFYPNHNGLILGSSGSGKSFASKMLLGQFLSQNENHEAI 489 Query: 512 VFDMGDGYKSLCENMGGVYLD---GETLRFNPF----------ANITDIDQSA-ERVRDQ 557 V + G+ ++ C G Y+ G NPF N D + Sbjct: 490 VVESGEDFEKFCRFFKGRYVKIDLGGAFSLNPFPERFRLLAGRKNGDRYDPDILGLLGSV 549 Query: 558 LSVMASPNGNLDEVHEGLLLQAVRASWLAKENR---ARIDDVVDFLKNASDSEQYAESPT 614 L +P+ + +H +LL V + E+ + + L ++ E+ + Sbjct: 550 LETFLTPSFPVGPLHRRILLACVETIYDRLEDDKRRPVLSMLAQELLAFRGKDREDETLS 609 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSL 674 M +L+ + G Y N ++V +L LE +L V + Sbjct: 610 Y-----AMGKVLESWAT-GIYQDLVN-HPGGFDYTERLVAFDLSALESHGALKGIVFAFI 662 Query: 675 IIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 R+ + K V DE R+L EF+ YRT R+ G + ITQ+ Sbjct: 663 GSLSLFRLREGGADRKLYLVFDEAHRILRELKGT--EFLSNLYRTVRKWGGGVVAITQSP 720 Query: 735 VDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 D ++ A N+ + + + +L F ++ ++ + Sbjct: 721 ADLLEEE---LAAGLLNNTFWTWVFPL----ANGHERLAELGFDEREQSLVHSLERVRGA 773 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKS 854 FS L++ RL PL+ + + + ++ K+ E + L+ + Sbjct: 774 -FSEGYLRIGTDGRILRLEAFPLAFWLGTRSPDEDRTFREAEKQHGGFLEGLRFLSRRGE 832 Query: 855 GP 856 G Sbjct: 833 GR 834 >UniRef50_B5Z4X1 Conjugal transfer protein n=3 Tax=Escherichia coli O157:H7 RepID=B5Z4X1_ECO5E Length = 792 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 122/859 (14%), Positives = 255/859 (29%), Gaps = 124/859 (14%) Query: 41 SRLLP-YRDYNQESGLF-MNDTTMG-FMLEAIPINGANESIVEALDHMLRTKL-PRGIPL 96 + + P Y + +S ++ ++ + ++ IP A++S +E + ++ L G Sbjct: 17 ASMYPEYMYHISDSVVYTLDRKMLATIAIQGIPFEFASDSFLENSFNGIKDYLVGVGKEG 76 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 ++L + + ++I L E S E + +F + Y+ Sbjct: 77 DVYLWTH-FIKEKI--YLDE---SYEFSSKFLNLFAEKYISLF---------KGDDFFKS 121 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA---QAFIDIVGEMI 213 + + + +E+++ L+ S VD D + +I Sbjct: 122 TWYITFGVSY---NDVDKGLERLEDIISQAMVVLKPFSAWLLKVDKNYVSETADYLSCLI 178 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLAR 273 N + L D D L L E+ N+ L Sbjct: 179 NKKHTIIPVSSTPLYESI--------ADSDWYFGNDTLELRNNESDDK--KFATNYVLKD 228 Query: 274 NPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTS 333 P + L + FI+T + + E KT + + + + Sbjct: 229 FPMFTTPGQW--------DFLLKLPYEFIITQSFLFEAPAKTVRKIDSQLNKMGSTGD-- 278 Query: 334 YAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF-- 391 + + + +E + + SG + SY +T F D E A + + + F Sbjct: 279 ------AAKSQQEELIAGKDFVTSGTNLFGSYHCVLTVF-GDTAEAARKNGIKVSSEFIT 331 Query: 392 RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPL 451 GF F + LP K + R + N+A L + Sbjct: 332 TGKGFRFSRATSAAPYVFFSHLPMN---------KTRPLSTRRTAANLACTFSLHNYSAG 382 Query: 452 TPAG---------LLAPTYRNQLAFIDIFFRGMN------NTNYNMAVCGTSGAGKTGLI 496 +G + T + L + + + N + + G +G GKT Sbjct: 383 KKSGNPIGDGSALMPLKTVSDGLYYFNTHYSDPNKNVTGQRIAGHAMILGATGTGKTTFE 442 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAE- 552 + + V D + GG Y +G NP+ D Sbjct: 443 GAAAGFLQRFDPYMFVIDYNRSTELFVRAYGGSYFALQEGVFTGLNPWQLAEDESSPIWK 502 Query: 553 RVRDQLSVMA------SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDS 606 R+ L +A + + + AV + R ++ + + Sbjct: 503 RLLAFLKSLAKAFVRDNMGNPCSDQQAIEMDAAVESLMTMPVQLRRTSALLQIVND---- 558 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR-DDAKMVVLELGGLED--R 663 E+ + L ++ NG Y +S E + D K V + + + Sbjct: 559 -------------SELRIRLAKWCKNGAYSWATDSPENTFNPMDYKKVGFDTTVILEKVN 605 Query: 664 PSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRH 723 A L I + L +++E W +F + I+ + R Sbjct: 606 GETHPACEPLLAILFFYKTLMQRDGKLMLTIVEEFWMPANF--PLTQDMIKSALKAGRLK 663 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 +Q+ D + + A ++ KI+L EF Y ++ + + Sbjct: 664 NEMMWLTSQSPEDAVNC---AIFAALVQQTATKILLPNPDAEFDGYKKI---GLVEKEFK 717 Query: 784 MIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKE-GL 840 + L++ S++ ++ + + S +Q R+E G Sbjct: 718 KLKSLSKESRT----MLIKQSGSSAFAKMDLYGFDDFLPVISGTTEGIVLCEQVREELGT 773 Query: 841 SIHE-AVWQLAWKKSGPEM 858 + + + + + Sbjct: 774 DEPDVWIPEFIKRIKEQKK 792 >UniRef50_C3RFU1 Predicted protein n=9 Tax=Bacteroidales RepID=C3RFU1_9BACE Length = 868 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 134/880 (15%), Positives = 279/880 (31%), Gaps = 88/880 (10%) Query: 27 KANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT-TMGFMLEAIPINGANES----IVEA 81 + E+ + +LP + + + + N T+G+ L + +ES I E Sbjct: 25 RQTEIEVKDKSVDLESVLPIQTITENAVINGNGDITVGYRLLLPEVFTLSESEAQYIHER 84 Query: 82 LDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAY------Y 135 L+ +L+ LP G + EY + I +Y + Sbjct: 85 LEALLKM-LPAGTVIHQQNFYYTGRYHHAEYSSNALIAENNRHFNGKEILNSYTNLYVTF 143 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGAS- 194 + L + + + P K+ + + EME + L Sbjct: 144 TNGSRNGKIRKSASGTSLMRK---LHYPFKQPYKE-YQQRLTEMEAFLMNFENGLSSIQQ 199 Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 + +D + + + +N + ++ Q +N V +S +K+ ++++ Sbjct: 200 FEIRKMDDTELNNAIYDYVNLSYETPENDATQ----KSVNPMAVSESGSMKIGQQHVSIL 255 Query: 255 LRENGRNSTARILNFHLARNPEIAFLWNMADNY----SNLLNPELSISCPFILTLTLVVE 310 N + H ++ + D+ S L L + I+ + + + Sbjct: 256 SLTNEGEHLQELAVPHTGKSKAYGGNIEIPDSIRSKCSMLYPVGLGLPFNHIVNIVIEIT 315 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 D T + EK + ++P ++ +E + N+ Sbjct: 316 DPDATVTAI-----GAEKDALNYITNFYPPAAEKQREQAAFCDEITQFDYQTAYTAFNVV 370 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELI------SPRFNHMRNFLTCLPFMAGKGLFKQ 424 D + + GF + F +P A Sbjct: 371 LNDTDRTSLMRKTA------LVQQGFSFMNQSSCYVENAELCNLFFCNIPGNARANYRGF 424 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 + + + G + A I+++ N N V Sbjct: 425 VN--------TTKQAICYLQKEGMYLSDEKGHIYHDRFGTPAKINLWDYPA-LNNKNRIV 475 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPF 541 G SG+GK+ + I + G ++ D+G Y+S+ G Y D + FNPF Sbjct: 476 IGPSGSGKSFWLNNYILQSYELGRDVMIIDIGGSYRSMIALNRGKYFDSTEQKKFAFNPF 535 Query: 542 ANITDI---------------DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL- 585 D D + + +S + + +L ++V + Sbjct: 536 LCDRDKNGKYLYIDTTDAESADDQIKTIVAIISYIWKVREPMLPAENAILRKSVIGFYDY 595 Query: 586 ---------AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYG 636 + + +LK S++ E + ++E+++LL+ YT +G Sbjct: 596 VNNSSIGEKHERIFPTLITYRAYLKEV-FSKRMTEFEKQKFEIEELLLLLEPYT-DGELS 653 Query: 637 QYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 N+ E +++ ++ + V + I +++ + K +ID Sbjct: 654 FLLNATENVDIVHDRLIAFDMED-ASKKEYFPLVAIITLQMIVDKIKKRQ-GFAKELIID 711 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E L ++ K G+FI YRT R+ G+ QNI+ F + SS + N + K Sbjct: 712 EALDFL--QDEKFGDFIAYLYRTFRKKEGSITLAAQNIL-FLKNMPSSIKDSIIINCATK 768 Query: 757 IILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP 816 IIL S + MI + + + F +++ N + R V Sbjct: 769 IILDHSEHRQNLPEVKAVLSITDEEAYMIESLQ--RTERWREFFIKMSNDAFIFRNEVSD 826 Query: 817 LSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGP 856 + + S ++Q E S + A+ + ++ Sbjct: 827 FAAVAFDSRQATVVRLKQLFNESGSTYTAINRYLEERRKK 866 >UniRef50_C3CTH0 Type IV secretory pathway VirB4 component-like protein n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTH0_BACTU Length = 622 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 97/638 (15%), Positives = 196/638 (30%), Gaps = 83/638 (13%) Query: 245 KVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 V + + + N + P + L+ S Sbjct: 4 FVAPPSFDRSFDDCLKVGNKYVRNMVMQGFPTNVSV--------GWLDLLYSYEGDLDTA 55 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSYAK----WFPSVEKEAKEWGELRQRLGSGQS 360 L + D E K E + + K + + R++L Sbjct: 56 LYIEPADDRTALDELTHKLTQFESQLQIETEKGNIRDITRLRNTIVQLYNQREKLEQNYE 115 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 ++ + + D+ E + Q + N + ++ + + LPF Sbjct: 116 NLFYIQITSNLYA-DSKEELNKESQKLDNKLKGRKVYMMPTYLRQDDGYKSALPFGKTYI 174 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNT 478 L + S + P G+ + ID + R Sbjct: 175 L-------DSFRNFNSGALTACFPFYNSEISHETGIFCGVNLSTSTPVLIDFYDR-NKLN 226 Query: 479 NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGET 535 N N+ V G +G+GKT + L G V+ D YK L +GG ++ Sbjct: 227 NSNITVFGQAGSGKTFFVSLLTMRSALRGVRTVIIDPEGEYKPLTRALGGAHIYVAPDSK 286 Query: 536 LRFNPFANITDID--------QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 NPF T+ + +V D L+++A G L ++ + + K Sbjct: 287 HFLNPFDVETEYNVDTGKEEIDLKSKVADLLNLVAVMAGGLTPEQRSIVGHNLAKVYKDK 346 Query: 588 ENRARIDDVVD----------------------FLKNASDSEQYAESPTIRSRLDEMIVL 625 + D + D + D + L+ + Sbjct: 347 GFTSAPDSLYDNEPYFDELTGEFSETGRKRQMPRFTDFHDEFESYARKEQNKELESLANA 406 Query: 626 LDQYTANGTYGQYFNSDEPSLRD--DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L + G Y + L + DA +V ++ LE+ L MF + + + Sbjct: 407 LKIFKEGGVYDMFDCYTSEELANFKDAPIVTFDISRLEES-VLRPIGMFVSMSWTWEKFA 465 Query: 684 RTPRNLKKLNVIDEGWRLLDFK---NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 + ++KK V DE W L++ +F+E R R+ G + +QN ++F ++ Sbjct: 466 KKNPHIKKRIVCDEAWMLVNKNMAGFEYTSQFLENCSRRIRKRNGGLLVASQNFIEFANN 525 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFL 800 + +A N+ I L+Q + + + +R+ + + L Sbjct: 526 E---QGKAVLTNAVVNIFLRQDSTDIDLLQDTFK--LSDGERNFLLQAQRG------ELL 574 Query: 801 LQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE 838 +++ SS +V P + + +++ + Sbjct: 575 IRMNGESSVA--YVMPFEF--------EVDLIKKAHQA 602 >UniRef50_B2CG16 Fused VirB3/VirB4 n=2 Tax=Campylobacter fetus subsp. venerealis RepID=B2CG16_CAMFE Length = 929 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 116/869 (13%), Positives = 251/869 (28%), Gaps = 119/869 (13%) Query: 40 FSRLLPYRDYNQESGLFMNDTTM------GFMLEAIPINGANESIVEALDHMLRTKLPRG 93 L+PY+ + + G E + + L+ ++R Sbjct: 126 LENLIPYQTLIDNIVITKEGDYLASWRVDGIAFEVEDDELIDMNK-NKLNMLVRQFAGEN 184 Query: 94 IPLCIHL--MSSQLVGDRIEYGLREFSWSGEQAERF-NAITRAYYMKAAATQFPLPEGMN 150 + H +++Q+ +++ + E F + + A PL Sbjct: 185 VSFYFHNARINTQVNQKGYFSNEFLKNFAKKYYEIFSADNLKENRLYLTAIYSPLSRAEK 244 Query: 151 LPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 + ++ K++ R + +I +L V + Sbjct: 245 MSFKNQNI-------EAKKRQIRTHLKSFNQKCNVIEQNLSHFKPYRLGVYDIEGVKFSS 297 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 ++ +N + P + L++ + ++ + L + + + Sbjct: 298 QLELYNYLIGGKFTKVRVPNAPLDFYLNGNLNEIFPSQHTMQLNYNDG---TRKFVKAIE 354 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 L P ++ +S + + + + + +T + + + E + L Sbjct: 355 LKDYPNVS--------FSGIFDSLMYANVEYTITQSFTPLSKKEARDELTKQQKRLMAAE 406 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 + + E L S Y +I + D + I Sbjct: 407 DDAI--------SQISELSSALDELQS-DIIFGEYHFSIVIYA-DKQNECERIANQIAVV 456 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA--- 447 + GF + LP + S N A+ M L Sbjct: 457 LQDLGFLATQANIALEATYFAQLPANF--------MLRPRLHTISSKNYASFMALHNFPR 508 Query: 448 ----DNPLTPAGLLAPTYRNQLAFIDIF----FRGMNNTN---YNMAVCGTSGAGKTGLI 496 NP A + T Q F +I + N N V G SG GKT L+ Sbjct: 509 GKQQGNPWGDAIAILQTPNGQPFFFNIHKTNFQKDEFGKNDVLANTFVLGQSGGGKTVLM 568 Query: 497 QPLIRSVLDSG---------------GFAVVFDMGDGYKSLCENMGGVYL---DGETLRF 538 + + D G +GG Y+ G+ F Sbjct: 569 NFTLNMLCKYNELETFADSTPKDKRKATYFYLDKDKGALGNIMTIGGKYVMITSGQPTGF 628 Query: 539 NPFANITDIDQSAERVRDQLSVMASPNGN----LDEVHEGLLLQAVRASWLAKENRAR-- 592 NPF ++ R++ + ++ + G L E L AV + +++ Sbjct: 629 NPFCCEATP-ENIRRLKVLMKMLVTKGGQTHLMLTTRDEEQLNLAVDSVMRLEKSDRTHG 687 Query: 593 IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM 652 + V L+ + + L +T +G F+++ +L + Sbjct: 688 VSRVWQLLQEGENETS------------SLKSRLMAWTIGNEFGWVFDNETDTLDFSDEN 735 Query: 653 V---VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKV 709 + ++ L + V + ++ I + + + IDE W L KN V Sbjct: 736 ILVYGIDGTDLLSDDEISPYVAYYILWRIIDMV----DGRRFGLFIDEAWDWL--KNPVV 789 Query: 710 GEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKY 769 + + +T R+ G TQ++ D S A S ++L + Y Sbjct: 790 SKEVFNKEKTIRKENGFLFLGTQSVEDIAK---SDIGTAIMEQSETILLLSNPKAKEDDY 846 Query: 770 NQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVE-NHSSWHRLFVDPL--SRAMYSSDG 826 + + + K FL++ ++ + ++ + L + S+ Sbjct: 847 CRAL--NMSEAEYQFVKTTIPEKY----EFLIKKGVDYRAIAKINLSHLGNMVRVLSTSK 900 Query: 827 PDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 + + + + E +QL + Sbjct: 901 DYVDELTKINAMNIGYDE-KYQLVKELYR 928 >UniRef50_C7N9N6 CagE TrbE VirB component of type IV transporter system n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7N9N6_LEPBD Length = 827 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 117/872 (13%), Positives = 259/872 (29%), Gaps = 113/872 (12%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAI--PINGANESIVE----ALDHMLRTKLPR 92 F +P+ + L + L+ ++ E V ++ ++ KLP Sbjct: 11 SFIYHIPWDFLLNDFILVNKNMGFQVTLKVRNHDLDFFTEEEVNLKILQYNNAIK-KLPD 69 Query: 93 GIPLCIHL-------MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL 145 + + + D + + + YY+ Sbjct: 70 NFIVHYEVQRKKSRGYIETEINDNFIPTVLMEKERKDLFSKGEYFKCDYYITLTYLIAED 129 Query: 146 PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 E L +++ ++ V A L+ A+ + + + Sbjct: 130 AENKINSLLANKKED--DSEEKMAEEAERELKIFRQKVASFIALLKYATTSIEVLQGDEL 187 Query: 206 IDIVGEMINHNPDSLY--PKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST 263 + + +N PK L+ E+ D K++ Sbjct: 188 MAYMYSTVNAEFPEKKKMPKSSLYPIDQYLSNSSFENGKDTKIQR-----------LTKA 236 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 + + P+ D S +L S+ F ++ ++ + + Sbjct: 237 KHLRTISINLFPD--------DIESRVLKKLESLDFEFRMSARYIILSPNEAKKMLKNFF 288 Query: 324 MDLEKKSKTSYAKWFPSVEKE------------AKEWGELRQRLGSGQSSVVSYFLNITA 371 + + K K ++ K+ +E G + Y I Sbjct: 289 IFHQGKQKNFGQYITEAITKKPSFNIDELELAKTEEAKMALNEFKEGGINYGYYTFTIIL 348 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 ++ + + I+ F + F ++N ++L +P + K Sbjct: 349 -ADEDLKRIEDNALKIVTIFDEQDFTCSIDKYNIFPSYLGAIPGNVKANIRK-------- 399 Query: 432 QRAESFNVANLMPLVADNPLTP--------------AGLLAPTYRNQLAFIDIFFRGMNN 477 S ++ L P + ++ T N + + ++ + Sbjct: 400 YPINSMLLSCLFPTSSLYRGEEVNEFFRDKKNITGVPLMMTKTDLNDIFYFNLHIKD--- 456 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLD---- 532 + + G + +GK+ L+ + + FD G + L MGG + D Sbjct: 457 -AAHTLIAGPTRSGKSVLLGMITAELKKYPNAQVFFFDKGGSIRVLTACMGGKFYDLGKG 515 Query: 533 -GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRA 591 L F P ANI + A +S++ N + + + + + NR Sbjct: 516 GDNDLAFQPLANIHIETERAFASNWIISLLQQENVIVTPDMKSTIWETLTTLSNDPPNRR 575 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 + + + N E+ L+ YT G+YG+YF+++E + D+ Sbjct: 576 TMTNFAFTVMN-----------------KEIQQALEPYTNTGSYGKYFDNNEDNFS-DSN 617 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGE 711 V E+G + + P ++ L I + + ++ V+DE W + +N Sbjct: 618 WQVFEMGRIIEDPKATAPILSYLFHRI--EVEKLTKDYLTAIVVDEAWFAM--ENESFRL 673 Query: 712 FIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ 771 RT + I TQ++ + + + A KI+L Sbjct: 674 KFNDWLRTLAKLNAFIIFATQSLDEIAKSEITP---AIVDGCKTKILLPSPQA-----QN 725 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFE 830 + D + + I A+ + + + + S + + + A + S+ D Sbjct: 726 YWKDLYSKFGLNSIEIEKVARGEMQKQYFYKSDLGSREFEMDLGKIELAYVGSASSTDQM 785 Query: 831 FVQQKRKEGLSIHEAVWQLAWKKSGPEMASLE 862 +Q+ E + E + K G Sbjct: 786 KIQEICAETKDLKEINLKWLEYKLGKNSKEFR 817 >UniRef50_C8WNM7 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WNM7_EGGLE Length = 1043 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 114/781 (14%), Positives = 243/781 (31%), Gaps = 86/781 (11%) Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 I E +L T + L + ++ + D G+ Sbjct: 305 EIYENWSELLNT-FDNTVHLQVKILCRVIDRDAFREDTFLPPVEGD--------YAGNRF 355 Query: 137 KAAATQFPLPEGMNLPLTLRHYRVFI-SYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 + Q + + R+FI + +P+ +++ + + SL+ + Sbjct: 356 RRDINQIIESKVAETQQNVERRRLFIVTVEAPTCEQASPLLARATE---QVMRSLKNMGV 412 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 ++ V + I+ + N + L + ++ + D + Sbjct: 413 NSEEVRGNELLRIIDSITNPRDPRGFVSFEDLKVTDERGVSAIQLGYT---TKDLVAPAD 469 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 ++ + S++++ + ++TL + +Q + Sbjct: 470 LTKIDDTHISWNGVTGQALYLQKWAG---SVRSDMISSLAELPINQVITLDMTSWEQSRA 526 Query: 316 HSEANLKYMDLEKKSKTSYAKW-----------FPSVEKEAKEWGELRQRLGSGQSSVVS 364 DL+ + K +++ + +LR L S + S Sbjct: 527 IETIESMNTDLKVQKSDYVLKHSQTMYITDEMLPTNLQDAMENARDLRDDLVSRDQKMWS 586 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQ 424 + D+ E E I + FR+ + + F LP Sbjct: 587 LTCTTMTWA-DSLEDCDENSGAIQDVFRRFTCRAVPLVKLQRQGFAAMLPTG-------- 637 Query: 425 LKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAV 484 + V+ + +A L+P + + G+ + FI F+ + N + Sbjct: 638 RCDIPYVRNLTTAPLAALVPFTSVELMERGGMWMGQNQTSKNFI--FYNRRDAVAPNGFI 695 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGF--AVVFDMGDGYKSLCENMGGVYLD---GETLRFN 539 G G GK+ + I L + +V D Y ++ M G + N Sbjct: 696 LGKPGRGKSVTAKNTILWTLLTDPTAEVIVLDPEREYINVAREMDGEVVQISGDSHTYIN 755 Query: 540 PFAN-ITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAK------ENRA 591 PF + + +Q D + M NL + + L+ + V + + Sbjct: 756 PFDLELVEGEQPLAMKVDAIMSMVEMMAKNLSPMQKTLVDRCVSRIYDRYFATHDQRDIP 815 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 + D + L + E + V +++Y FN ++ + Sbjct: 816 TLIDFYNMLNQQPEPEGRM-----------LAVTIERYVTGQ--ASLFN-HPTNVNTHKR 861 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVG 710 VV ++ D + + L+ NR+ R R+++ IDE L F+N Sbjct: 862 FVVYDIRDCADN--MKGLALLILLDQTWNRIVRNRERHVRTWVFIDEMQLL--FENDYAI 917 Query: 711 EFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN 770 + ++ + +R++ ITQNI +++ S NS + ++L QSA + A Sbjct: 918 SYFDQLWTRSRKYGAIPTGITQNIERIINNEKSRL---MLANSDFLVLLGQSASDAAALG 974 Query: 771 QLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH--RLFVDPLSRAMYSSDGPD 828 ++ + Q M+ G LL R+ D M ++ D Sbjct: 975 EV--IKLSERQVAMMRNAGPG------EGLLVAGGKIIPFENRIPTDSAIYRMVTTKLDD 1026 Query: 829 F 829 Sbjct: 1027 L 1027 >UniRef50_A5FFJ6 Bacteroides conjugative transposon TraG-like protein n=36 Tax=Bacteria RepID=A5FFJ6_FLAJ1 Length = 837 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 121/864 (14%), Positives = 268/864 (31%), Gaps = 69/864 (7%) Query: 31 VLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFML-----EAIPINGAN-ESIVEALDH 84 + LP +++ + D + E A+ E+I A Sbjct: 1 MRNSSKTATLESRLPLLA-VEQNCIISKDGDVTACFAVSLPELFTAGSADYEAIHSAWHK 59 Query: 85 MLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFP 144 ++T LP + V + + S ++ F Sbjct: 60 AVKT-LPDFTVVHKQDW---YVKENYNPNMEGEEQSFLARTFERHFNERPFLNHCCYLFL 115 Query: 145 LPEGMNLPLTLRHYRVFISYC-SPSKKKSRADILEMENLVKIIRASLQGASI-TTQTVDA 202 ++ P + + I V L + + + Sbjct: 116 TKTTRERMRMQSNFSSLCRGTLIPKEVRDPEAIRRFMETVAQFERILNDSGLIRLNRLTE 175 Query: 203 QAF--IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGR 260 + D ++ + L+ + Q ++V + L+L + Sbjct: 176 EDLTGADHRQGILEQYLTLSKEEGASLEDIALGAEQ-------VRVGSKRLSLHTLSDTD 228 Query: 261 NSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEAN 320 + A + + + + L + C I L ++ + + Sbjct: 229 DLPAAVASDTRYEKLSTDRSDCRLSFAAPV---GLLLGCNHIYNQYLFLDSSEENLQKFE 285 Query: 321 LKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 ++ S A++ + + + + S S + NI A+ D+ Sbjct: 286 KSARNM-----HSLARYSRANQINREWIEKYLNEAHSLGLSSIRAHFNIMAWS-DDPAEL 339 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 +++ D ++ + + + +P AG ++ + Sbjct: 340 KQLKNDCGSALALMECKPRHNTADAATLYWAGMPGNAGDFPCEESFYTFIEPAL------ 393 Query: 441 NLMPLVADNPLTPA--GLLAPTY-RNQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTG 494 L + +P+ G+ + +DI M TN N + G SG+GK+ Sbjct: 394 CLFTQETNYRSSPSPFGIKMADRLTGRPIHLDISDLPMKRGIITNRNKFILGPSGSGKSF 453 Query: 495 LIQPLIRSVLDSGGFAVVFDMGDGYKSLC-------ENMGGVYL---DGETLRFNPF--- 541 ++R + G ++ D G+ Y+ LC GVY + + FNPF Sbjct: 454 FTNHMVRQYYEQGAHVLLVDTGNSYQGLCGLINSRTRGEDGVYFTYTEDNPIAFNPFYTD 513 Query: 542 ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR---ASWLAKENRARIDDVVD 598 + DI++ +++ + E L AV + + Sbjct: 514 DKVFDIEKRESIKTLIMTLWKRDDEPPTRSEEVALSNAVNGYIELIRDNGLAPSFNGFYE 573 Query: 599 FLK-NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 ++K + + + + + + +L+ Y G Y NSD + +V E+ Sbjct: 574 YVKGDYHEILKEKQVREKDFDIANFLNVLEPYYRGGEYDYLLNSDRQLDLLAKRFIVFEI 633 Query: 658 GGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 ++D L V ++ N+M R + ++KL +I+E W+ + + E+I+ + Sbjct: 634 DAIKDHKILFPIVTIIIMEVFINKMRRL-KGVRKLILIEEAWKAI--AKEGMAEYIKYLF 690 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA--KEFAKYNQLYPD 775 +T R+ G I +TQ + D + NS KI+L Q +F + Sbjct: 691 KTVRKFFGEAIVVTQEVDDIIKSPI--VKESIINNSDCKILLDQRKYMNKFDDIQAMLGL 748 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLL-QVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQ 834 + + + + + + S+ + V Y+++ + V Q Sbjct: 749 TDKEKAQVLSINMNNSPSRLYKEVWIGLGGTQSAVYATEVSLEEYLAYTTEETEKMEVMQ 808 Query: 835 KRKE-GLSIHEAVWQLAWKKSGPE 857 E ++ A+ +A + E Sbjct: 809 AAAELDGNVELAIRHIAKLRWERE 832 >UniRef50_C3DUE0 Hypothetical conjugation protein n=5 Tax=Bacillus thuringiensis RepID=C3DUE0_BACTS Length = 630 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 99/629 (15%), Positives = 204/629 (32%), Gaps = 75/629 (11%) Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFIL 303 L V + + + P+ L+ +I + Sbjct: 21 LDVITPSVINFQPKQLNYGDRFQRVLVITDYPQRVG--------EAWLSRIANIPG-VVT 71 Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKKSKTS-YAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 ++ D +E + +L K + + + + + +++ Q V Sbjct: 72 SMHTEPIDPYDLVNEIRVSMGELGAKIENMGNPVSRERAQDQYDDAKAILKKIDREQQKV 131 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + + + +D + + + + G +P F T P+ + Sbjct: 132 MLMTVVLLVSAED-LDELNTRCRRVESMLAAAGLRARTPMFLQEEGLRTVGPWGMMENRI 190 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFI-DIFFRGMNNTNYN 481 K + + + +VA P V G+L T + + D + R + TN N Sbjct: 191 KDI----GARNMPAESVAAGFPFVYSGLNDGEGILLGTDKGGGIILCDFWTRRESRTNSN 246 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRF 538 + V G G GK+ ++ ++R G ++ D D Y L NM G +D + R Sbjct: 247 LTVIGRPGVGKSTAVKKILRGEYGRGTKIIIIDPEDEYGDLARNMDGDAIDCGGSQESRI 306 Query: 539 NPFAN----ITDIDQSAERVRD---------------QLSVMASPNGNLDEVHEGLLLQA 579 NP + D D+ + + + GN+ LL A Sbjct: 307 NPLQIRDVPLDDKDEKEKLYEEVEGNNSGPLAYHFQFLRTFFKLYLGNISRRDMSLLEVA 366 Query: 580 VRASWLAKE-------------NRARIDDVVDFLKNASDSEQYAESPTIRSRLD------ 620 + A + +K + D+ L + S + + Sbjct: 367 LEALYNSKGINWATNPQDIPNEQYPTLKDLYFILLDLSKENVEELTKKGGDLSNVSLTGA 426 Query: 621 ------EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFS 673 ++ +LL A G ++ ++ + VVL + L + + A ++ Sbjct: 427 NSKDWLDLSILLRS-AAVGADSFLWSGP-TTINPKSDFVVLNIKNLLEANDEIRRAQFYN 484 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 ++ + N + + R K L +DE + L+D + + +F+ + R++ G + ITQ+ Sbjct: 485 VLGWAWNEVSK-NRKEKVLLGVDECYLLIDPEVPETIKFLRNTSKRIRKYEGGLMVITQD 543 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 +VDF +A N YKI+L Q K+ +L + + Sbjct: 544 LVDFLDPAVKRYGQALLNNPVYKILLGQGEKDIEALEKLMTLSE--------REIHTLSE 595 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 L N ++ + P M+ Sbjct: 596 GNRGEALFIAGNRRMHLKIDISPEELIMF 624 >UniRef50_A9IYE3 Vbh4 protein 2 n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IYE3_BART1 Length = 611 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 82/643 (12%), Positives = 179/643 (27%), Gaps = 74/643 (11%) Query: 43 LLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVE--ALDHMLRTKLPRGIPLCIHL 100 ++PY + + + ++ + ++ +N I++ L L I L Sbjct: 15 IIPYVRHVNKHIIALDSRALMSVIALEGLNFETADIIDLNVLHEQLNNLFKNIADERIAL 74 Query: 101 MSS-----QLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 S + V + ++ Y + P Sbjct: 75 YSHIIRKRETVYPDGTFRSAFAKQLDDKYRERMVSQELYRNDLYLSILWNPHVDKTDKLA 134 Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINH 215 ++ + I ++E++ + +L+ + + + G + + Sbjct: 135 EFFKRLGKAKQEKTEVDEESIRKLEDITADVIQNLERYG--ARRLS---LYEHEGNIYSQ 189 Query: 216 NPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN---STARILNFHLA 272 + ++ QL + V +D + G F Sbjct: 190 QSEFIH----QLVGGRRERVPLTWGTIASTVYSDRIIFGKEIIEIRTEAGRRFAGMFGWK 245 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P + + + L++ FI T + V + + K + Sbjct: 246 EYPAKTRV--------GMADGLLTLPFEFIFTQSFVFKSKNVAKQIMGRKQNQMVNAGDR 297 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 + E + L S + + + L++ F D + + + Sbjct: 298 --------AGSQIMELDDALDDLESNRFVLGEHHLSLAVFA-DAPQELADNLAKARSQLT 348 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA----- 447 G + + LP S N A L P + Sbjct: 349 NGGAVIAREDLGLAATWWAQLPGNYAYRTRSG--------AITSRNYAALSPFHSFPVGK 400 Query: 448 --DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD 505 N PA L T + + F + N VCG SG+GKT ++ L+ + Sbjct: 401 IDGNVWGPAVALMKTSAGSPFYFNFHFGDL----GNTFVCGPSGSGKTVIVNFLLAQLQK 456 Query: 506 SGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANIT--DIDQSAERVRDQLSV 560 V FD G + GG Y+ +G+ P + + + + + Sbjct: 457 HDPNMVFFDKDRGAELFVRAGGGTYMPLKNGKPTGIAPLKGLDYNNPADRVFLRQWIIKL 516 Query: 561 MASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 ++S + + E + AV L + + I + F Sbjct: 517 VSSEDQKISEAERQDITAAVDQLALLPKEQRTISALQMFFDTTHREG------------- 563 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR 663 + L+++ G F++ + + DAK + ++ D Sbjct: 564 -IAGRLERWCKGNALGWVFDNPDDDIGIDAKFIGYDMTDFLDN 605 >UniRef50_A5TXM1 Possible conjugal transfer protein TrbE n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TXM1_FUSNP Length = 912 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 125/941 (13%), Positives = 268/941 (28%), Gaps = 135/941 (14%) Query: 29 NEVLGEMSFPQFSRLLPYRD-------YNQESG-----------LFMNDTTMGFMLEA-- 68 ++ + LLP+ Y + + D + + Sbjct: 11 KKIKDFNNRDYLYHLLPWACNYENKDFYISKEVAGKTQTFHFPIVITKDGSFQTTFKVRG 70 Query: 69 --------IPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 + E + E L L L ++ + S++ + G++ Sbjct: 71 KDLDSSTAYELLSVTERMNETLKQ-----LDNSWTLQMNAIRSKIRNYVGKKGIKNIPIR 125 Query: 121 GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFIS-YCSPSKKKSRADILEM 179 + ER + ++ L +F + ++ Sbjct: 126 ILELERSEFFNSGNHYESDYYITFTWLVPEDNLQKAKSLLFRENDKKLINDTFQKNLKYY 185 Query: 180 ENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDL------ 233 N + I + L + ++ + ++ N + R + Sbjct: 186 NNELLKIYSFLNETLQECEVLNVDETMAYYHSFVSDNSHKIKVPRAIYYEGKLIATGDMP 245 Query: 234 ------------NYQCVEDSFDLKVRADYLTLGLRENGRNSTA---RILNFHLARNPEIA 278 N ++++ Y+T G N I + P Sbjct: 246 ELIKKAIEKGELNENGIKETLLPVFIDSYITDSTLTGGINPQIGEDYIKTISILNFP--- 302 Query: 279 FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF 338 + +++ +I ++ +++ + Y + + Sbjct: 303 -----GFSVPGMIDRLNRTDIEYIWGSRYIMLEKITIKKILDKYYNKWWAARLSFKDMFI 357 Query: 339 P------------SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 S A E + + +L + V Y + K+ + Q+ Sbjct: 358 EFFSKNETTNPNQSAMNAAIEVRDEKTKLDEDRDIVGYYTTTVILKNKNR-DIVERQAQE 416 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 + GF + F + +L +P + + V+ N Sbjct: 417 VRTLLSSLGFVVQIEDFYTLDCWLGVMPGNNYFNERRPFMNSKVLSHMLPINSVWAGNKW 476 Query: 447 ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 + TP L T N +++ + + + + G +G+GK+ L+ L + L Sbjct: 477 NKHLDTPPLLYCQTTGNTPFRLNLHYTDV----GHTLIVGPTGSGKSVLLGTLQSAFLGY 532 Query: 507 -GGFAVVFDMGDGYKSLCENMGGVYLDG--ETLRFNPFANITDIDQSAERVRDQLSVMAS 563 + FD G K L GG++ D + +RF P + + + + + + Sbjct: 533 KNAKVIGFDKGASTKILNRAYGGLFYDLGKDNIRFQPLRGVGILQTNIDI---EFEKIKK 589 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRL---- 619 N NL + + + K + + +F++N + +P IR Sbjct: 590 NNRNLSDE---TIRKKAEEV-EKKRSDIEKEWCQEFIENLLEDNHVQITPEIRQYTWNGL 645 Query: 620 ------------------------DEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 + L QY G Y +YF+ + L + + Sbjct: 646 VSLGSLSPEMRTLSSFSNLVGGQSKTIKDALAQYCGKGPYAKYFDGNSDFLE-NNNYTIF 704 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEK 715 E+ + + + + + L IE M + L +DE W LD N + I + Sbjct: 705 EMEQIAEAKNAITPALNYLFHKIETDMI--DKISPTLITLDESWLFLD--NPRFESKIRE 760 Query: 716 GYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP- 774 + R++ + + TQ++ D S A +I L + Y Sbjct: 761 WLKVMRKNNVSVVFATQSLADIAE---SKIKSAILDACYTRIYLPNTTALSEVQKGYYKM 817 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA-MYSSDGPDFEFVQ 833 + ++I + K +F + S L + PL A + +S G D E Sbjct: 818 FDLNDREIEIIYQSIPKKHYYF-----KNPQGSRLFELALSPLELAYVAASSGEDKEKCD 872 Query: 834 QKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSV 874 + + L E K A +E + V Sbjct: 873 ELAE--LDTKEFNIAWLNHKGWNGEAIVERIERMIADEKKV 911 >UniRef50_A4J314 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J314_DESRM Length = 616 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 95/662 (14%), Positives = 225/662 (33%), Gaps = 85/662 (12%) Query: 205 FIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 +I + + + N L + + + + Q + D++ + Sbjct: 3 YISFLKSLFSKNKQQLKKQAQPVSDLA----QIFSPDR-IDEYEDHIRVD--------DM 49 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY- 323 + PE + +I+ +++ L ++ + + + Sbjct: 50 FSRVLVVEALPEFICF--------GWFDEITTIAG-VTVSVALHPYNKKEANDRITREQV 100 Query: 324 ---MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETA 380 DL K ++E + + L G++++V+ + IT + E Sbjct: 101 NIGADLRLAIKHGDTTRTGALETKYAFYYNFLTDLQLGRNNLVAATITITVTSHNYQELL 160 Query: 381 LEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVA 440 + + I + ++++ + F +PF+ + + N A Sbjct: 161 YK-CELIKDRLGAT--KVVTMYQRQLDGFTHNMPFIGSLNEYHDVDI---------ANAA 208 Query: 441 NLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 L PL++ + P+G+ F+D+F +M +CG + +GK+ ++ + Sbjct: 209 CLSPLISSDFTHPSGIYFGVNQSGSPVFLDLFIGAPRLFGPHMFLCGGTRSGKSYTVKGI 268 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETL---RFNPFANITDIDQ------- 549 + +G + V+ D Y+ + E +GGV + + FN F + D+ Sbjct: 269 TARSIANGMYTVIIDPEGEYQKIVEALGGVIVRFKPNMECMFNIFDIEPEEDEDTGNKYL 328 Query: 550 ----SAERVRDQLSVMAS--PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD----- 598 AE + ++ + N L L +AVRA +L++ + + Sbjct: 329 DIAGKAEEICHLITSLVESQANEKLSAEERALASRAVRAEYLSRNITEDPESIYQSGGKT 388 Query: 599 ----FLKNASDSEQYAESPTIRSRLDE-----MIVLLDQYTANGTYGQYFNSDEPSLRDD 649 + ++ + +RL+E + +L +T G G YF+ D Sbjct: 389 TGDGTVFIGKTYKEMPTISSFITRLEEMGAPKLATMLYPFTKEGGMG-YFDGQGIGKFYD 447 Query: 650 AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKV 709 ++VV ++ GL+ + MF + + + + ++ +K ++DE W ++ + Sbjct: 448 NQLVVFDVSGLKTEFQ-RMYAMFVMTSWAWEKFVKKDKSKRKRLLVDEAWLMMRHTD--T 504 Query: 710 GEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKY 769 +F+ R ++ + + +Q+ +F S + + K LK + Sbjct: 505 AKFLSDLARRGAKYNTSLMLASQSFREFT----SEEGKVILAQCNTKFFLKMHPNDAKSL 560 Query: 770 NQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDF 829 +++ I F +LQ S+ + + SD Sbjct: 561 TEIF--HLPAETVKRIESFKQG------EGILQANMESAIVKFKGFSFEESYLRSDPEAV 612 Query: 830 EF 831 Sbjct: 613 LA 614 >UniRef50_C0BU73 Putative uncharacterized protein n=2 Tax=Bifidobacterium pseudocatenulatum DSM 20438 RepID=C0BU73_9BIFI Length = 511 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 96/547 (17%), Positives = 184/547 (33%), Gaps = 65/547 (11%) Query: 304 TLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 ++TLV + + + K+ +++ ++ G+LR L S +V Sbjct: 6 SMTLVRRKNAEVKMQVMDQRRKNRKQGLDPDDLPDDLADQQ-EQLGQLRDELRSTNQRLV 64 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + + + E +++ S +F M LP Sbjct: 65 D-SIIVIGVSAASQEELEVACRNVKAKVNAQSCTAESLKFMQMEGLTAELPLGNNP---- 119 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNYN 481 + + + + A L+P P GL + D ++ N N Sbjct: 120 ----LPMKRTLTTNSAAILIPFTTQEVFEPHGLFYGSNARSGNPILAD----RRSHMNSN 171 Query: 482 MAVCGTSGAGKTGLIQ-PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLR 537 V GTSG GK+ ++ + L+ +V D Y +L GG + G R Sbjct: 172 GFVLGTSGGGKSFTVKQEIAGMFLNRDDEVIVIDPEREYLALAAAFGGQIIQISAGTGTR 231 Query: 538 FNPFANITDIDQSAERVRD-------QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR 590 NP + + D +++ V+D + + LD + +GL+ Q V + N+ Sbjct: 232 VNPMDIVLEDDSASDPVKDKTNNVVSMIGALIGGIDGLDPLQKGLVDQCVSNLYTRYRNQ 291 Query: 591 ------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + D+ D L+ D + L+ Y G FN + Sbjct: 292 GGGVVQPTLQDLHDELQAGGDQVSRY-----------LADALNPYITGSMSG--FNG-QT 337 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR-NLKKLNVIDEGWRLLD 703 ++ + V ++ GL L M +I + NR+ R + +DE R Sbjct: 338 NVDLSNRFTVFDVSGLSG--ELRTFGMMVVIDQVWNRVIRNKANGRRTWLYVDEFHRF-- 393 Query: 704 FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA 763 F N + Y+ AR++ ITQN+ + + AR NS + ++L Q++ Sbjct: 394 FSNQYAAAQFKDIYKRARKYGLGVTGITQNVEEILDLQD---AREMLSNSDFLMLLSQNS 450 Query: 764 KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH--RLFVDPLSRAM 821 + +L QR + L+++ + R+ + Sbjct: 451 TDADALCELL--TLSEEQRQYFTGVLPGQG------LMKIGSAYVPFDGRIPAGGDLYRL 502 Query: 822 YSSDGPD 828 YS+ + Sbjct: 503 YSTTFQE 509 >UniRef50_A4V6R2 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6R2_PSEFS Length = 960 Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats. Identities = 120/749 (16%), Positives = 245/749 (32%), Gaps = 95/749 (12%) Query: 168 SKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQL 227 +++ I +L + + Q +I++ ++N + Sbjct: 228 AERAYNGHAKIFGQYCTEIEQALATYGFQPEVLTGQGYINLHYGLMNPVRSFEIEPPKYR 287 Query: 228 DP----YSDLNYQCVEDSFDLKVRADYLTL-----GLRENGRNSTARILNFHLARNPEIA 278 + N VE +L A + + G + R I + P + Sbjct: 288 ADIPILDALENPDIVETRDNLAATATFAHVETEPNGWTIHDRGVPYYIRPVSVMGKPIRS 347 Query: 279 FLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF 338 + + I ++T+ V V S + + ++ Sbjct: 348 APGMLQVAMAG-------IESESLITMNWSVPRAVVVTSRLAI-RGRMIAAKESMRVGDK 399 Query: 339 PSVEKEAKEWGELRQRL----GSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 + E++ + +R ++ S + ++I N E + + + Sbjct: 400 ETRERQRSDLDAVRSKVSSENASNREQFFDLSVHINLMGF-NKEIIDDQAMSLERRLWRI 458 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP- 453 G +PF + K LK + + +V+++ P+ + P Sbjct: 459 G---HKEVLRGDAVVRNSMPFNFRQTSMKLLKRS---IPHLTESVSHMAPMFVEYQGVPD 512 Query: 454 AGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL-DSGGFAVV 512 +L Q F+D++ +N + +CGT+G+GK+ L+ ++ + Sbjct: 513 PAILMNNRAGQPIFLDLWGNSVNT--AHSLICGTTGSGKSFTFNNLLMALRVKYRPKVWI 570 Query: 513 FDMGDGYKSLCENMGGVYLD--------------GETLRFNPFANITDID--------QS 550 D GD Y+SLC + G Y+ + + NPFA D + Sbjct: 571 IDKGDSYESLCLVLNGNYVRLTTERFVEPVSGRTIDPICINPFALKRDENNRNVKPELDE 630 Query: 551 AERVRDQLSVMASPNG-------NLDEVHEGLLLQAVRASWLA-----KENRARIDDVVD 598 V L +M NL +V LL QA+ + + R D + Sbjct: 631 IFFVARMLIMMMEAGDGSGSTKSNLTKVTSSLLYQALEEFYRDWVETRPMDEPRFRDFIP 690 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 L + EQ E + L Y G + F+ + + VLE Sbjct: 691 HLIKTNFHEQKGEV---------LAQNLTLYYGTGPFAAIFDGYLD-VDWENDFTVLETQ 740 Query: 659 GLEDRPSLLVAVMFSLIIYI-ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 + P+L V +L I ++ R+ KK+ +DE W L + + + Y Sbjct: 741 RMSKSPAL-GIVTLALFRQIDLYCKFKLDRSRKKVVAVDEAWATLS--DPNAAKALSSFY 797 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAA------RAAWGNSSYKIILKQSAKEFAKYNQ 771 R RR+ + I+Q + DF + + + N+S+ L S ++ + Sbjct: 798 RELRRYGAGCLLISQTVKDFVNLIKAETSGGGDSQDGILENTSHYFFLACSESDYRVAKE 857 Query: 772 LYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN-----HSSWHRLFVDPLSRAMYSSDG 826 F + D+ + +S ++ +S RLF P++ + SS Sbjct: 858 EL--AFTDEEIDLWRSLASLPP-MYSEVFYRMRTSQSLYYSGVFRLFSAPMTLWIASSHP 914 Query: 827 PDFEFVQQKRKEGLSIHEAVWQLAWKKSG 855 D+ +++ R E + + + ++ Sbjct: 915 DDY-RMRELRTEAIVNEQRIESSVARQQA 942 >UniRef50_C3KSP5 AAA ATPase n=2 Tax=Clostridium botulinum RepID=C3KSP5_CLOB6 Length = 620 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 89/653 (13%), Positives = 210/653 (32%), Gaps = 71/653 (10%) Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 + + +++ N + + + I +F Sbjct: 1 MLFKKKKKNHTNFNIKMNENYYENIENNVPEKFSFFSPEAIMEEKDYMYLGHEHYIRSFA 60 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 ++ P ++ L+ +I L++ + K + + Sbjct: 61 ISVYPRKIYV--------GFLDALFNI-GEIDLSVYCDAVPNDIVVKQLTKKSVQAMSEY 111 Query: 331 KTSYAKWF----PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQD 386 + P +E+ ++ E R + + + + ++I K + E E Sbjct: 112 NVYMNRGDIYNTPVLEEMIRDLEEERANVQTNKDKLFFVTISIVLHAK-SLEELQEKTLQ 170 Query: 387 ILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLV 446 I + F + + + + +P + + S+ V+ L P+ Sbjct: 171 IEDMFAGKAMQTRTLTNRQIEGLIKSIPVCQPNIKEYE-------RNMTSYGVSALFPIS 223 Query: 447 ADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 + P G FI+ F N N+ V G G+GK+ I+ I Sbjct: 224 NPDLTHPNGAYVGRNLFSGSPVFINQFIGPPLLNNPNIGVFGIPGSGKSVFIKSFINKHS 283 Query: 505 DSGGFAVVFDMGDGYKS-LCENMGGVYLD---GETLRFNPFANITDIDQ----------- 549 G V D Y+ + + M GVY+ GE N F D ++ Sbjct: 284 SLGTKVAVLDPEGEYRKSIVDLMDGVYITITAGEISGINLFDISPDFNEKTGVEFVPIMD 343 Query: 550 SAERVRDQLSVM--ASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD--------- 598 ++D LS + ++ L+ + + AV ++ I+ + Sbjct: 344 KVSDIKDLLSSIMRSTSGRPLNGLELVAVETAVIETYANFGINKDINSLYQRGGTKLPDG 403 Query: 599 ------FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKM 652 K + ++ + + E+ +L Y + G F+ + D K+ Sbjct: 404 SYAVGRVKKKMPTLSHFHKNLSKKPNAKELSNILIPYLRGNSMG-MFDCESTLPD-DVKI 461 Query: 653 VVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEF 712 + +L + F L+ ++ + +++KK+ +DE W + + + F Sbjct: 462 IGFDLSHI-TDEFTKFYSTFVLLSWLWQKFVMQNKSVKKIIAVDETWMFVKY--PESAHF 518 Query: 713 IEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 +E R R+H + + +Q I +F ++++ A + + ++L+Q+ + + Q Sbjct: 519 LEVLARRGRKHKCSLLFASQYIDEFLNNES---GLAVIKSCATSVLLRQNPQPAEQIVQY 575 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSD 825 Y ++ + F + L ++ ++ P ++ Sbjct: 576 Y--GLASGTKEYLTTFSNGE-----CILSMQGAVTAV-QVEPIPYEFPYITTS 620 >UniRef50_B4YK33 TagB4 n=4 Tax=Betaproteobacteria RepID=B4YK33_9BURK Length = 804 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 119/833 (14%), Positives = 241/833 (28%), Gaps = 104/833 (12%) Query: 43 LLP-YRDYNQESGLFMNDTTMGFMLEAIPINGANES---IVEALDHMLRTKLPRGIPLCI 98 LP + + + +G ++ + +E + + R G L Sbjct: 20 FLPKISQHITADLIHIKTGYIGLVIRLEGLPFESEDETHLQAHFTQLARLLSGAGKTLGS 79 Query: 99 HLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 L + R + RE+++ + F A Y+ T L +++ Sbjct: 80 RLGLWTTLQRRKKAFDREYAFDNPFCQEFAAK----YLAKFQTGDYFENIFYLTGLIKY- 134 Query: 159 RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA---------QAFIDIV 209 + I E ++L ++ LQ + A + Sbjct: 135 -----------EDFDDGIKEAQDLQTVLMQGLQPY--DPVVLTAWQNQDGTLFSEVLSFF 181 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 G +IN + + +D Y L + D+ I + Sbjct: 182 GFLINGVQEDI--PLSNVDAYQTLASSDLHFGSDV-------------------CEIRSQ 220 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 + R L + + +L L + C F LT + V D + +L+ Sbjct: 221 NGTRFATSFDLKDFGVSKVKVLTGVLDLPCEFTLTQSFVYVDSTAMQEIIKKQLNNLKSV 280 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 + + E + L SG+ Y ++ D + A + + Sbjct: 281 GDQALD--------QQDELKAGQGGLASGELMFGEYH-SVLVVYGDTAKQASQNGARVYT 331 Query: 390 SFRKNG-FELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVAD 448 F+ +G + + + + + +P K + N ++ Sbjct: 332 RFQNSGGYRFVKAGLSAPATYFSQVPGSKHKPRCFPKSTVNLATSFGMHNYSHGKSQGNP 391 Query: 449 NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPLIRS 502 A + T N + + F N + + G +G GKT L L+ Sbjct: 392 IGDGSAVMPLQTISNTIYDFNFHFSNPKEDNIGDQIAGHTLILGATGTGKTTLETALLAF 451 Query: 503 VLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLS 559 + V D+ +G K + GG Y DG+ NPF + D ++ E + + Sbjct: 452 TDRFNPYLFVLDLDEGMKIFIKATGGTYYAPKDGQPSGCNPFQ-LPDSPKTREFIYRIVG 510 Query: 560 VM-ASPNGNLDEVHEGLLLQAVRASWLA-KENRARIDDVVDFLKNASDSEQYAESPTIRS 617 + + G + E + AV ++ + + + Sbjct: 511 ICGKNAEGRVTAAEEKQIQLAVDTLMNTIDFGNRNFSVLLQSIPHDPGN----------- 559 Query: 618 RLDEMIVLLDQYTA--NGTYGQYFNSDEPSLRDDAKM-VVLELGGLEDRPSLLVAVMFSL 674 D + L ++ G Y ++ D + +L + L M + Sbjct: 560 -ADSLRTRLSRWCRSEGGRYAWCLDNTSNDFDPDDFYRIGFDLTDILKDDYLPTEPMLAY 618 Query: 675 IIYIENRMYRTPRNLKKLN--VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 + ++ + M + VI E W F EF+ K +T R+ G I +Q Sbjct: 619 LFHLRSLMMERVAESGGILGTVITEFWYPARF--EITQEFMLKILKTDRKLGGWVILDSQ 676 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 + D + S + KI L E+ Q + Sbjct: 677 SPEDAIN---SPIFATLVQQTPTKIFLPNPDAEYKGSYDRCGITLKEYQELVKLTLE--- 730 Query: 793 DQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKEGLSIH 843 +FL++ S++ L + A+ S + + E + Sbjct: 731 ---SRTFLIRQSRQSAFATLNLYGFEDEMAVLSGSSNNVAILDSVLNELGDVP 780 >UniRef50_A0M144 TraG-like protein n=3 Tax=Flavobacteriaceae RepID=A0M144_GRAFK Length = 804 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 117/828 (14%), Positives = 266/828 (32%), Gaps = 64/828 (7%) Query: 52 ESGLFMNDTTMGFMLEA--IPINGANESIVEALD----HMLRTKLPRGIPLCIHLMSSQL 105 ++ +F N+ + E I +E E + L++ LP G + Sbjct: 17 DNIIFANNGNVVLCYEVILPEIYSLSEKDFEDIHGAWFQALKS-LPVGTVVH-------- 67 Query: 106 VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYC 165 + + ++ + +F Sbjct: 68 --------------KQDIYLKTAYSCEKLPRESFLEKATHDHFKGRGFMQHRSFLFFILP 113 Query: 166 SPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 + + N+ K I L ++ + + + + L K Sbjct: 114 KNKALNNSKYVNPFRNISKGIVRELDE-NVHSFIGAVSDSVSFINNSRKIDLFPLERKGI 172 Query: 226 QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST----ARILNFHLARNPEIAFLW 281 + N D+ + + +G + + ++ E Sbjct: 173 ERLTNCYFNGFNKGFDTDILLEKGNINIGENYFDTLAINSELCFGESVQSSKTNEKFTSD 232 Query: 282 NMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSV 341 + + + L+++ ++ + ++D+ K + K +L+K S + Sbjct: 233 DFVFHQGFIDGLGLTLNENHMVNQIIYLDDKHKWRKLLDKKVEELKKSSN-----FGSQN 287 Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP 401 + + + ++ + +S + + + + I F++ P Sbjct: 288 KIVLGKIQHILDQINADDNSRIIRGHLNIIYWDREAKNLNRIASKIKTEFKELDILPYYP 347 Query: 402 RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY 461 +N++ + + + L + G++ Sbjct: 348 GGEERKNYI----LNSYYCFSSNFSNEDLYVTDL-KHALCLFINNTNYKSDSTGIIFNDR 402 Query: 462 RNQ-LAFIDIFFRGMNN-TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 + D++ N A+ +G GK+ L ++R +SG V+ D+G Y Sbjct: 403 EHNIPVLKDVWDEKKKRIKARNFAIFAPTGEGKSFLANNILRQYFESGVRLVIIDLGGSY 462 Query: 520 KSLCENMGGVYL-----DGETLRFNPFANITDIDQSAERVRDQ---LSVMASPNGNLDEV 571 + G Y G++L NPF D S ER+ D L + + + + + Sbjct: 463 TKFAKLYPGQYTVLRYESGKSLGINPFYINNINDLSPERLEDLSVFLFELFASDLKVTKA 522 Query: 572 HEGLLLQAVRASWLAKENRARIDDVVDFLK-NASDSEQYAESPTIRSRLDEMIVLLDQYT 630 + + +R +L + +D F++ N + + + + ++ +Y Sbjct: 523 QSVSIKKILRHYYLNTPHNHSMDSFYQFIESNQKELLSKLKIHPDYFNITNFLHIMSEYV 582 Query: 631 ANGTYGQYFN--SDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRN 688 +G Y F D+ +D +++V EL ++D +L VM LI R R+ Sbjct: 583 GDGLYSFLFEMSEDQTYKIEDKRLIVFELDEVKDNKEILS-VMLKLIKSAIQRTIWKNRS 641 Query: 689 LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARA 748 K + + DE + L F+N V E +E Y+ R+ GA I Q+I ++ S+ + Sbjct: 642 EKGIILFDEFAKQLKFEN--VLESVEFYYQAIRKQNGAIGIILQSINQLPNNSTSA---S 696 Query: 749 AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSS 808 N+ L +L + Q I + ++ +++ S+ Sbjct: 697 ILENTQVIYSLHNEKGYEELVRRLSLSKHDLNQLKSIKNNLTGSRK-YTEIFIKIGKQSN 755 Query: 809 WHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGP 856 RL V A Y +DG + + + + S+ +A+ + K+ Sbjct: 756 VFRLEVPMEVYAAYQTDGSENDHIMALYDQHKSMEKAITEFINPKNRK 803 >UniRef50_C8WH82 Type IV secretory pathway VirB4 protein-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WH82_EGGLE Length = 836 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 102/793 (12%), Positives = 226/793 (28%), Gaps = 99/793 (12%) Query: 75 NESIVEALDHM--LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITR 132 E+ M L + + + ++ + I R F S + + + Sbjct: 97 EENQQSVFAAMSELYDYFGSETSVQLTITNTPIPEREIGRK-RFFEKSDPRVDEYVEEYN 155 Query: 133 AYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG 192 +RH + A + +L Sbjct: 156 RILNDKMREGVSN--------LVRHRYLTFLV---GADDLDAAAPRLARARGDCMQTLAR 204 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + +D +++V + + + + L S L + + L + D Sbjct: 205 IRCEARMLDGAERLELVQSQLRPKAEFTFSWDK-LSQLSGLRTKDLIAPSVLDFKPD--- 260 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 G + R +D + + + + P +TL + + Sbjct: 261 -GRADCYRADGTWCRVLVFRGF--------GSDLEDDCIANVVDLPMPLNVTLHIHPMGK 311 Query: 313 VKTHSEANLKYMDLEK----------KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSV 362 + + ++K K ++ P + +E EL +L + + Sbjct: 312 AAAVAYVKKRIAWMDKEVIDEQMSAVKKGYDFSILPPELSHSKEEAEELLDQLQNKNQRL 371 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 +Y + + D E + I+ + R+ E+ + + + LP Sbjct: 372 FTYTGLVFTYA-DTAEALDHQTRQIMAAARQRSIEVEPLSYRQRQGMNSILPLGLNH--- 427 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNY 480 V + + + MP + G L + + Sbjct: 428 -----VEVSRYMTTAQIVIQMPFASQELNQEGGGYYGQSKQSGNLVICN----RKKLASP 478 Query: 481 NMAVCGTSGAGKTGLIQPLIRS--VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET--- 535 VCG G+GK+ ++ I + + +VFD Y + E GG + Sbjct: 479 MGFVCGKPGSGKSFSVKREIMNTILAYPDDEVIVFDPAGEYAPVVEPAGGTCIRFSPDTD 538 Query: 536 LRFNPFANITDIDQSAER-----VRDQLSV----MASPNGNLDEVHEGLLLQAVRASWLA 586 NPF D++ + + L++ MA L E + ++ + V +++ Sbjct: 539 TFMNPFDLSDVADKANQAQLAFKIDAILALSSATMAEGREGLPEADKSIISRCVELAYMR 598 Query: 587 ---KENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE 643 K + D ++ + ++Y F + + Sbjct: 599 CEGKGRLPVLGDFY-----------ELLLEQEEPEARDIALRYERYVKG---ALSFFNHQ 644 Query: 644 PSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLL 702 ++ ++ ++ L + V M + + + NRMY R + IDE L Sbjct: 645 SNVGFTNRITNVDFKDLSQN--MRVFGMLTALEAVRNRMYANFERGVTTWLYIDEVQSLF 702 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 + + K + R+ ITQN + AR NS + ++ KQS Sbjct: 703 GH--PAIISYFSKFWAEGRKFNLICTGITQNSTYMLEHED---ARNMVLNSDFVLLHKQS 757 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP-LSRAM 821 + + L + I A LL + + Sbjct: 758 HLDRKSWVDLL--ALSAQEEGYIDDSIKA-----GEGLLVAGGVRVPLKDDFPKGALYDL 810 Query: 822 YSSDGPDFEFVQQ 834 +++ + +++ Sbjct: 811 FNTKPEEIAQIKR 823 >UniRef50_A6L0N6 Conserved protein found in conjugate transposon n=119 Tax=cellular organisms RepID=A6L0N6_BACV8 Length = 844 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 135/869 (15%), Positives = 274/869 (31%), Gaps = 73/869 (8%) Query: 31 VLGEMSFPQFSRLLPYRDYNQESGLFMNDT--TMGFMLEAIPINGANESIVEALDHM--- 85 + + R P + + D T+ F +E + EA+ Sbjct: 1 MRNVLKAETLERKFPLLS-VENGCIVSKDADLTVAFEVELPELYTVTAEEYEAMHSTWIK 59 Query: 86 LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL 145 LP +C ++ R + G E S+ ER Y+ + Sbjct: 60 AARVLPEHSIVCKQDWFTKE-SYRPQNGGEEQSFLSRSYER--HFNERPYLNHRCFLYLT 116 Query: 146 PEGMNLPLTLRHY----RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVD 201 + R F+ + K A LE + I I + ++ Sbjct: 117 KTTRERNRRQSDFSTLCRGFLLPREITDKDMAARFLEAVEQFEHIVN--DSGHIRLRRLE 174 Query: 202 AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 + + S + V LK + Sbjct: 175 TEEI---------TGTRERPGLVEKYLSLSMEDETAVLQDICLKPGRMRIGDKRLCLHTL 225 Query: 262 STARILNFHL---ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 S L L R E S L +SC I + + +++ K Sbjct: 226 SDTEDLPGKLSTDMRY-ERMSTDRSDCRLSFAAPVGLLLSCNHIYSQYVFIDNAQKILQM 284 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 ++ +++ S + + V N+ A+ +D E Sbjct: 285 MEKNSRNMLS-----LSQYSRSNAVNQEWTEMYLDEAHTKGVLPVRCHCNVIAWAED-AE 338 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + D + + + +P AG ++ + Sbjct: 339 EFRRIRNDTGSQLAMMECTPRYNTVDTPVLYWAGIPGNAGDFPAEESFYTFL------EQ 392 Query: 439 VANLMPLVADNPLTPA--GLLAPTYRNQ-LAFIDIFFRGMNN---TNYNMAVCGTSGAGK 492 L + +P+ G+ +N +DI M TN N + G SG+GK Sbjct: 393 AVCLFAGETNYRSSPSPFGIRMADRQNGIPVHVDISDLPMKRGIITNRNKFILGPSGSGK 452 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENM-------GGVYL---DGETLRFNPF- 541 + L+R+ + G ++ D G+ Y+ LC + G+Y+ + + FNPF Sbjct: 453 SFFTNHLVRNYYEQGAHILLVDTGNSYQGLCRMIHERTRGGDGIYITYEEDNPISFNPFY 512 Query: 542 --ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQA----VRASWLAKENRARIDD 595 + D+++ L++ + E L A +R +E R + Sbjct: 513 TDSGQFDVEKRESIKTLILTLWKREDEAPKRSEEVALSGAVNAYIRKITENREARPDFNG 572 Query: 596 VVDFLK-NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVV 654 +F+ + + +D + +L+ + G Y NSD + + +V Sbjct: 573 FYEFVDGDYRRMIAEKKVREKDFDIDGFLNVLEPFYKGGDYDFLLNSDRELDLTNRRFIV 632 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 EL + LL V ++ +M R + ++K+ +I+E W+ L N + +I+ Sbjct: 633 FELDNISGNKVLLPVVTLIIMETFIAKMRRL-KGIRKVILIEECWKALMSAN--MSGYIQ 689 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA--KEFAKYNQL 772 ++T R++ G + +TQ + D S A NS KI+L Q +F +L Sbjct: 690 YLFKTVRKYFGEAVVVTQEVDDIISSPI--VKEAIINNSDCKILLDQRKYMNKFEHIQRL 747 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLL-QVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 + + +++ + S+ + V ++++ + Sbjct: 748 LGLTEKEKSQILSINQANHPGRFYREVWIGLGGTRSAVYATEVSAEEYFTFTTEESEKLE 807 Query: 832 VQQKRKE-GLSIHEAVWQLAWKKSGPEMA 859 VQ+ +E ++ A+ ++A +K + Sbjct: 808 VQRLAEELDGNLELAIRRMAERKREEQRQ 836 >UniRef50_C7H9G2 Putative TraE protein n=5 Tax=Clostridiales RepID=C7H9G2_9FIRM Length = 918 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 97/777 (12%), Positives = 224/777 (28%), Gaps = 97/777 (12%) Query: 86 LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPL 145 L + I + + ++ ++ + + + T Sbjct: 209 LYNYVDASIHVQLSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTAI---------LQK 259 Query: 146 PEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAF 205 ++ + + + + K +RA + + + + +D QA Sbjct: 260 QLASGNNGIVKTKYLTFTIEADNLKTARA---RLTRIGLDLLGYFKTMGCVAHVMDGQAR 316 Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 ++++ + + + + P R D + S V L G + Sbjct: 317 LEVLHGIFHPDGE---PFRFDWDWLAP-----SGLSTKDFVAPSSLCFGTAKTFGLGGKY 368 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMD 325 +I + ++ L E I ++ L + DQ + K D Sbjct: 369 ----GAVSFLQILAPELSDEMLADFLKTESGI----LVNLHVQAIDQTEAIKTIKRKITD 420 Query: 326 LEK----------KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKD 375 L+ +S + ++ +L +L + + + D Sbjct: 421 LDAMKIQEQKKAVRSGYDMDILPSDLATYGEDAKKLLNKLQTRNERLFMLTFLVLNMA-D 479 Query: 376 NNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAE 435 + +K L+ + + ++ LP + + + Sbjct: 480 TKQKLGNDVFQAAGVAQKYNCSLVRLDYQQEQGLVSSLPLGINQ--------IKIQRSLT 531 Query: 436 SFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGL 495 + NVA +P V + + + + R N GT G+GK+ Sbjct: 532 TSNVAVFVPFVTQELFQSGAAMYYGINAKSHNMIMLDRKQARC-PNGLKLGTPGSGKSMS 590 Query: 496 IQP-LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQ-- 549 + ++ L + + D Y L + + G + NP + + Sbjct: 591 CKSEIVSVFLTTADDIFISDPEAEYYPLVKRLHGQVIKLSPTSKDYVNPLDINLNYSEDD 650 Query: 550 -----SAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA------KENRARIDDVVD 598 ++ V ++ L+ + ++ +AV+A + EN + D+ Sbjct: 651 SPLALKSDFVLSFCELVMGGKTGLEAIERTVIDRAVKAIYRPYLASPCPENMPILSDLHQ 710 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELG 658 L + D + LD Y + FN + ++ ++V ++ Sbjct: 711 ALLD-----------QHLPEADRVAQALDLYVSGSL--NVFN-HKTNVDIHNRLVAFDIK 756 Query: 659 GLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGY 717 L L M + I R+ + + DE LL K + + + + Sbjct: 757 ELG--KQLKKLGMLIIQDQIWGRVTQNRSQGRATWYFADEFHLLL--KEEQTAAYSAEIW 812 Query: 718 RTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQF 777 + R+ G TQN+ D S S NS + +L Q++ + ++ Sbjct: 813 KRFRKWGGVPTGATQNVKDLLS---SPEIENILENSDFITLLNQASGDRKILSE--RLNL 867 Query: 778 LPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYSSDGPDFEFV 832 Q+ I LL EN + + + ++ + + Sbjct: 868 SADQQKYIDNSEPG------EGLLIFENVVLPFSNPIPKNTQLYKIMTTRLSEVVEL 918 >UniRef50_Q8VRD5 TraB/VirB4-like protein n=1 Tax=Haemophilus influenzae biotype aegyptius RepID=Q8VRD5_HAEIN Length = 807 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 106/849 (12%), Positives = 246/849 (28%), Gaps = 100/849 (11%) Query: 40 FSRLLP-YRDYNQESGLFMNDTTMGFMLEAIPING--ANESIVEALDHMLRTKLPRGIPL 96 LLP YR+ + + + + F +E + +++ + + L Sbjct: 12 IEDLLPKYRNNVNDYVISLEGDKLLFTIELSGTSFKSVSDNELYSYFVGLDD-------- 63 Query: 97 CIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLR 156 L + G ++ E E + + + T + Sbjct: 64 -FFLNLGKEYGGKLAVWTHIIKKRDEFKEEY-QFDSKFIREFTETYLTDFDSSKHNFFKT 121 Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ----AFIDIVGEM 212 +Y + + A + L I +G ++ + + + + Sbjct: 122 NYYISFVLKYDDIHEGLAQCDSIIALADTILRRYEGGKLSVVDISDSVSICENNEFLSYL 181 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 +N N ++ + ++ + +Y +R + + L Sbjct: 182 LNGNRSTITLNDSE----------IIDSVCNSDWLFNYDFFEIRNRESTKSKFGTAYVLK 231 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 P + + + L + FIL+ + + K+ ++ L + Sbjct: 232 GYPAESS--------HGMWDFLLELPYEFILSQSFIFTTAQKSIRAIEIQENKLSSAND- 282 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSF- 391 ++E +E L +G+ + Y ++ F D+ +TA+ I+ +F Sbjct: 283 -------KAKREKEELEIANAFLTTGEIAFGDYQASMLIF-GDSPKTAVSNGAKIIGAFT 334 Query: 392 -RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 R G F M FL+ +P + L V N Sbjct: 335 DRGKGARWTRFTFESMYAFLSVMPGTNIRPLNSVRCSTNFVNGFSLHNY-----FGGKRS 389 Query: 451 LTPAG-----LLAPTYRNQLAFIDIFFRG------MNNTNYNMAVCGTSGAGKTGLIQPL 499 P G + T L + + + + V G +G GKT Sbjct: 390 GNPIGDSSALMPMKTPTQGLYYFNTHYTPLHINATGEKIAGHFLVLGATGTGKTTWEAAF 449 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANITDIDQS-AERVR 555 + V V D + G Y G NPF + + + Sbjct: 450 VAFVTRFNPQIFVVDYKRSTEIYMRAYGASYFTLESGIDTGLNPFQLEDHTSKGLLQFLY 509 Query: 556 DQLSVMA-SPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 +S A NG + + ++ +AV A L + + R ++ + S Sbjct: 510 SFVSSCAVDHNGLVSDEERLIIKEAVDAVMLLPKEQRRFSLILQSIPQGS---------- 559 Query: 615 IRSRLDEMIVLLDQYTA--NGTYGQYFNSDEPSLR-DDAKMVVLELGGLEDRPSLLVAV- 670 + + L ++ G Y +S + + + + + Sbjct: 560 ------NLHIRLRKWCHFYQGEYAWVVDSPVNKFNPLEFDRIGFDTTVILETKDHPATEP 613 Query: 671 MFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 + ++++Y +N M + + L++I+E + I++ +T R + Sbjct: 614 LLAILLYYKNVMKKANQGRLMLSIIEEF--YMPCNYPTTQNMIKQTLKTGRLTGEFLGLV 671 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYN-QLYPDQFLPLQRDMIGKFG 789 +Q+ D A ++ KI+L + + P ++ F Sbjct: 672 SQSPADAIQC---QIFAAIVEQTATKIMLPNPMATYDDEDIGYKRIGLTPKDFAILKGFD 728 Query: 790 AAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRK-EGLSIHEAV 846 + L++ + ++ + + M S ++ R G + ++ + Sbjct: 729 KESRK----MLVKQGDSTTELHFDLGHCMKFMPILSGSTEGQIECEKIRAIHGDNPNDWI 784 Query: 847 WQLAWKKSG 855 + Sbjct: 785 EPFLARMKE 793 >UniRef50_A8S5W5 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8S5W5_9CLOT Length = 903 Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 120/883 (13%), Positives = 265/883 (30%), Gaps = 127/883 (14%) Query: 21 LPDESAKANEVLGEMSFPQFSRL------LPYRDYNQESGL---FMNDTT--MGFMLEAI 69 + + MS+ +F + +P +G+ F+ T +G ++E Sbjct: 65 EKAYKSLYYAIRYAMSYKEFVKHPEKKGQIPVAGVTPFTGISDMFIEYGTSYLGVVVEIP 124 Query: 70 --PINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERF 127 E L + G L + +++ + S+ + ++ Sbjct: 125 SIEFRFLTEPRQNQLIDQVY-----GSILRTVNDTDSAAMVKLDRPVLYDSFIEGEEKKM 179 Query: 128 NAITRAYYM-----KAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENL 182 + AY + + + + L L + + + D + Sbjct: 180 EDLKAAYIRGLMTDEELTVRIGIIQDRMSQLELFNNKETVYLPFHYMVFFGRDRGRLTEQ 239 Query: 183 VKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSF 242 + + +L I + + Q + + D + D Y D Sbjct: 240 AQNMVDTLGPHGIECRILKEQELAIFLKYNYSGVFDEREAWKLTPDQYMD---------- 289 Query: 243 DLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFI 302 + D L + R + N + P + ++ Sbjct: 290 --WILPDKLAVTSRTVAYDGLV-THNLRVTDYPIVVPNAWGHALFNRP---------DVR 337 Query: 303 LTLTLVVEDQVKTHSEANLKYMDLEKK-SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 +TL + D+ K + + +L ++ + T + E+ L Sbjct: 338 VTLKMRPIDRYKGIKQIDRAIDELREQGASTGKTSRLMELGSHIDTLAEVLSLLQGDNEI 397 Query: 362 VVSYFLNITAFCKDNNETALE-----------VEQDILNSFRKNGFELISPRFNHMRNFL 410 ++ + ITA+ + + L +++ I + GF+ + Sbjct: 398 LMDVNIFITAYDYEASPELLGPGYRPPGQGIGMKRQIRRELSEWGFKSSDMFMRQFDAYA 457 Query: 411 TCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDI 470 + + S +VA P V + G+ + F+D Sbjct: 458 SGHISAFDAFSKD-------GRGIHSGSVAAAFPYVYKVMMEKKGICLGKSAGRPVFLDF 510 Query: 471 FFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVY 530 F R N NM V G SG+GK+ + ++ ++ + D + Y L ++ G Sbjct: 511 FARNKERVNSNMVVIGKSGSGKSYATKSILANLAAENSKIFILDPENEYLGLARSLKGKI 570 Query: 531 LD---GETLRFNPFANITDI-----------------------DQSAERVRDQLSVMASP 564 +D R NPF IT + + + + + + Sbjct: 571 IDVGSATEGRLNPFHIITGLSDEEDELDGDEEENQIPGAKVSFNMHMQFLEEFYRQIL-- 628 Query: 565 NGNLDEVHEGLLLQAVRASWL-------------AKENRARIDDVVDFLKNASDSEQYAE 611 ++ L + + DD+ + + N Q + Sbjct: 629 -PGIEADALEYLNNITIRMYEAKGIDAETDLSGLTPGDYPTFDDLYEKILN---DFQMST 684 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPS--LLVA 669 + L ++ + ++ G +N E S+ +V L + + A Sbjct: 685 GDYSKKNLTVLLNYISKFATGGRNAGLWNG-EASISTQENFIVFNFQSLLANKNNTVANA 743 Query: 670 VMFSLIIYIENRMYRTPR-------NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARR 722 M ++ +++N + + + K + VIDE +D K +F+ + + R+ Sbjct: 744 QMLLVLKWLDNEIIKNRDYNLRYGASRKIIIVIDEAHVFIDSKYPVALDFMYQMAKRIRK 803 Query: 723 HTGAYITITQNIVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD--QFLP 779 + G I ITQNI DF +++ + + A Y I S + +LY Sbjct: 804 YNGMQIIITQNIKDFVGTEELARKSTAVINACQYSFIFPLSPNDMHDLCRLYEKAGAINE 863 Query: 780 LQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 ++D I G + F++ + S + ++ Sbjct: 864 SEQDEIINNGRGRA-----FVVTSPSERSSIDIETPKDIERLF 901 >UniRef50_B2TH83 CagE TrbE VirB component of type IV transporter system n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH83_BURPP Length = 849 Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 127/852 (14%), Positives = 263/852 (30%), Gaps = 130/852 (15%) Query: 66 LEAIPINGANESIVEALDHMLRTKL-PRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQA 124 AI GAN + V H++R+KL + SQL GD+I + + ++ + Sbjct: 63 FAAINTLGANNNRVALWSHVVRSKLRYDLSGIKYDNYFSQLFGDQIAERVGKKTFFQNEL 122 Query: 125 ERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVK 184 + + R +A L + + + + R + +L + Sbjct: 123 -FLSPVYRPAPGRAERIGAALDKQGGSDV----------LAAARDEIDRITNQLVRSLRR 171 Query: 185 IIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDL 244 + L + G ++N + + LD YS Sbjct: 172 YNPSVLGVEEFDGEKPAISHLQAFYGRLLNADVGPV-----PLDSYS----------VRF 216 Query: 245 KVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 ++ + L G + + + N+ + L + F+L+ Sbjct: 217 AIQRNELHFGREIIEIEGPVSSRYAGVVGL---KAPYGAENAKVNIFHGLLRLPYEFVLS 273 Query: 305 LTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVS 364 +L K + S + KE + R+RL +G+ + Sbjct: 274 QSLTFLPLNKADKFLQTQISQFSSTDANSL---------QLKELKDARERLQAGKFGMCE 324 Query: 365 YFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP-RFNHMRNFLTCLPFMAGKGLFK 423 + +T + D+ E E +++ F + LI R + + LP G Sbjct: 325 HEFILTIY-GDSIEEVNEGINEVIAVFEEKNLTLIRKKRGKLITQYFGMLPGNFLTGRLD 383 Query: 424 QLKEAGVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMN 476 + + N A PL + L + N F++ Sbjct: 384 AM-------PVSTDNFAAFFPLHNFFTGNAEGSQWGSPIALMESTSNGPIFMNYHVSRRR 436 Query: 477 NTN--------------------------------------YNMAVCGTSGAGKTGLIQP 498 N N V G SG+GKT L + Sbjct: 437 LRNQEVRLEYTPEENEEDEEDEQAEQEGIITPKRKAHKKELGNYQVIGPSGSGKT-LTKL 495 Query: 499 LIRSVLDS--------GGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDI 547 ++R+++ +D G + L +GGVY DG+ NP+A + + Sbjct: 496 MLRTLMRKVRPGKGMKPFKTFAWDKDYGEEILVNALGGVYFRLEDGKPTGLNPYA-LQNN 554 Query: 548 DQSAERVRDQLSVMASPNGNL--DEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASD 605 + + + + + A + + +L ++ + E+ R ++D L +S Sbjct: 555 EVNCQFIHELFMWCACKDPAYLRTGDDDKILSDVIQDVYKLPEHLRRPARMMDTLPGSSS 614 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD-AKMVVLELGGLEDRP 664 + Q +R+ + L ++ G Y ++ A ++ + Sbjct: 615 AVQGPGG----ARIVSLKAALVRWVEGGQYSWVLDNSRDLFDLTRANDFGFDMTKFLNND 670 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 + I +++ + + I E W+ L K+ + EFI +T R+ Sbjct: 671 FARTPIQLL----INHKIDLSVDGNPFVLDIAEAWKAL--KDPFMQEFIGDKAKTVRKLQ 724 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 G TQ+ D + S +IIL + Y + + + Sbjct: 725 GIIGLDTQDPTDLST---SPIRGTLLQQFPTQIILPNDRAKREDYVE--GLGLTDREYSL 779 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFVQQKRKEGLSI 842 + + + F L + N S R + + A+ S+ + V++ + + Sbjct: 780 VREGMLDEPGKF---LFKQGNDSVVVRNDLGGMDDMIAVLSASIDNVPLVRELIEAHGNK 836 Query: 843 HE-AVWQLAWKK 853 E + Q ++ Sbjct: 837 PEIWLPQFFRQR 848 >UniRef50_Q4A7V5 TRSE-like protein n=2 Tax=Mycoplasma hyopneumoniae 7448 RepID=Q4A7V5_MYCH7 Length = 820 Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 101/662 (15%), Positives = 218/662 (32%), Gaps = 76/662 (11%) Query: 173 RADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPY-S 231 D E+ + ++ L I T+ + +++ ++N + + + + S Sbjct: 157 NKDEKELTFEINTLKQKLAHIEIETEKLKIDELLNLAISVLNPSDKFSKEEIKNMTENPS 216 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 N Q ++K + Y ++ P + + +S+ Sbjct: 217 RENIQNAFALSEIKWKPTYFQS--------MNKYFSIQGVSELPLELPPYWANNFFSSES 268 Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE--WG 349 N + + + N Y L S+ A + E ++ Sbjct: 269 N----------IVWHIQKLSDREKDKILNRAYSILSLNSEEQSASVINRRKNELEQVAIE 318 Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 + SGQ+ Y + ++ + ++E++ + +G + + FN + + Sbjct: 319 NVVDVAASGQNIF--YSTFLFINQANSKQELKDIERENEQIVKNSGSVIHTLIFNQLNAY 376 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAF 467 + FK + N+A P + T F Sbjct: 377 VNSF--------FKYFDTLKERIEMPANNIAWGFPFSTREFNDNNYNILGTNFSDGTPLF 428 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG 527 + F++ N N+ + GTSG+GKT + + LI L G +V D + Y + + Sbjct: 429 FNQFYQKGVRKNSNLFILGTSGSGKTTITKKLIIYNLAIGNSVIVLDPQNEYSKIGKKTN 488 Query: 528 GVYLDGETLR---FNPFAN------ITDIDQSAERVRDQLSVMASPNG--------NLDE 570 + + FNP + D+ + D +++ S +L Sbjct: 489 ANIIHLNSSGLTVFNPLQIRKTFNPNSSEDEDSFLNSDLIALHISKLETFFRIIFPSLKN 548 Query: 571 VHEGLLLQAVRASWLAKE---------------NRARIDDVVDFLKNASDSEQYAESPTI 615 VH +L +++ + I D+++ +K + Sbjct: 549 VHFIAILNSLKILYQNFGFFEIKDIDITKLENEEYPIISDLIEIIKENEFDYLSDNDKKV 608 Query: 616 RSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSL 674 + + G+ FN + + K + + L + + A F Sbjct: 609 L-----IASFETDFGEYSILGRMFNDVSSTNEINTKFSIFNVAALMNLEKRVYQAAFFLA 663 Query: 675 IIYIENRM--YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQ 732 + +I+ ++ + N K + V+DEG + +D N F+ +T R++ G+ + TQ Sbjct: 664 LSFIQGQISEFYLESNRKIVLVVDEGHKFIDETNLFALNFLFDTAKTIRKYNGSLMIATQ 723 Query: 733 NIVDF-DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD--QFLPLQRDMIGKFG 789 N DF + +A+ + A N Y I +K+ K N LY + +++ I Sbjct: 724 NPGDFAITGEAARKSEAIIENCQYSIFFNLKSKDIEKINLLYRNVGGLSEEEKNFINLAQ 783 Query: 790 AA 791 Sbjct: 784 IG 785 >UniRef50_UPI00016C6849 Type IV secretory pathway VirB4 components-like protein n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C6849 Length = 640 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 93/669 (13%), Positives = 204/669 (30%), Gaps = 101/669 (15%) Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 ++I+ N D + + LD + + +V ADY+ +G + +F Sbjct: 12 AKIIDFNKDDILNETNLLDKGIPSLKELISP-SSFEVDADYIKIG--------KKYVRSF 62 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 + P ++ L+ + T+ + D E K E + Sbjct: 63 IMQGFPAQVYV--------GWLDSIFNYEGETDTTIHIDPTDDKIALEEYTRKITQFEAQ 114 Query: 330 SKTSYAKWF----PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 + K + + +E R +L + + + D+ + + Q Sbjct: 115 LMSEQEKGNIRNITRLRDKIQELYMERSKLERNTDKLFQVQIACNLYS-DSLDELNKETQ 173 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 I N R ++ + T P+ + + S + + P Sbjct: 174 KIDNKLRGRKMYMMPTYLRQDDTYKTVSPYGKSYVE-------DMFRNFNSGALTSCFPF 226 Query: 446 VADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV 503 + G+ ID + R N N+ V G G GKT + L Sbjct: 227 YNSDIRHEKGVFCGINLSTCSPILIDFYDRS-KLKNSNITVIGQPGTGKTFFVSLLTMRS 285 Query: 504 LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAER------- 553 G V+ D Y L E +GG + NPF + + Sbjct: 286 ALRGIRTVIIDPESEYGRLTEALGGSRIYLATDSKECINPFDIEEEDELDENFLPTGIKL 345 Query: 554 ------VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR----------------- 590 + D L+++A G L + Q ++ + + Sbjct: 346 VDVKGKIADLLNLIAVMAGGLSGAQTSTVAQLLQELYESFGITKNPKSLYVTEPYFDKNT 405 Query: 591 ------------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 D + L ++ E + +++ +L + G Y + Sbjct: 406 KEFIHEGRKKTMPIFSDFYNSLSEYAEKNSDIE-------VMDLVRVLKMFKKGGVYDLF 458 Query: 639 FNSDEPSLRD--DAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 ++ + ++ +V ++ LE+ L M+ + + + + + K V D Sbjct: 459 DCYTSSNISNFKNSPIVTFDVSKLEEN-ILRPIGMYVALSWTWEKFGKKDPYINKRIVCD 517 Query: 697 EGWRLLDFK---NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 E W L+ + +F+E R R+ G + +Q +F S+ +A ++ Sbjct: 518 EAWMLVSKNMAGSEYSAKFLETASRRIRKRMGGLLVASQKFTEFVE---STQGQAVLTSA 574 Query: 754 SYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 KI L Q + ++ ++ + + L++++ S+ ++ Sbjct: 575 ETKIFLGQDTTDIDSIQNMFK--LSEGEKLFLLRADKG------EMLVRIQGESTVVKVL 626 Query: 814 VDPLSRAMY 822 + + Sbjct: 627 AFDFEKKLI 635 >UniRef50_Q832B8 TraE protein, putative n=41 Tax=Bacteria RepID=Q832B8_ENTFA Length = 825 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 102/772 (13%), Positives = 228/772 (29%), Gaps = 100/772 (12%) Query: 98 IHLMSSQLVGDRI-----EYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLP 152 + ++ + E+ S E+ +A + + L G N Sbjct: 115 FLNYFDSSIKVQLSFLNQRADMEEYQKSIHIPEQTDAFNGIRREYSGMLKGQLARGNNGL 174 Query: 153 LTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 + +I++ + A +E + + A+ + + ++D + I+ M Sbjct: 175 TKTK----YITFGIEADSLKEAK-PRLERIEADVLANFKVLGVRAHSLDGYERLAILHRM 229 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRAD-YLTLGLRENGRNSTARILNFHL 271 + + + + L+ + ++ Y +G + Sbjct: 230 FHPADNQKFKFAWDAIWKTGLSSKDFIAPDSFTFKSGQYFQIG------------RTYGA 277 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK--- 328 +I ++ L+ E S+ ++TL + DQ K DL++ Sbjct: 278 VSFLQILAPELTDRMLADFLDLENSM----VVTLHIQSIDQSAAIKNIKRKITDLDRMKI 333 Query: 329 -------KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 ++ + E L + L S + L + + + Sbjct: 334 EEQKKAVRAGYDMDIIPSDLATFGSEAKTLLEDLQSRNERMFLVTLLVMNHAR-TRQKLE 392 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 +K L + + ++ LP + + + + + A Sbjct: 393 NNIFQAAGIAQKYNCALRRLDYQQEQGLMSSLPLGLNQ--------IAIQRGLTTSSTAI 444 Query: 442 LMPLVADNPLTPAGLLAPTY---RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP 498 +P L N L D N N + GT G+GK+ + Sbjct: 445 FVPFTTQELFMNGEALYYGLNALSNNLIMAD----RKKLKNPNGLILGTPGSGKSFSAKR 500 Query: 499 LIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDIDQ----- 549 I + L + + D Y L + +GG +D NP + + Sbjct: 501 EITNAFLITQDDIAIIDPEQEYSPLVQRLGGQVIDISPASDQYINPMDLTLNYSEDDNPL 560 Query: 550 --SAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLA------KENRARIDDVVDFLK 601 ++ + + ++ L+ V + ++ + V + E + D+ L+ Sbjct: 561 TLKSDFILSLMELIVGGKAGLEPVEKTVVDRCVHMVYRDYLQDPKPEKMPVLGDLYRLLR 620 Query: 602 NASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLE 661 ++E + L+ Y FN + ++ +++V + L Sbjct: 621 EQPEAE-----------AQRLATALEIYVTGSL--NVFN-HQTNVEIKSRIVCYVIKNLG 666 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLK-KLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 L M + + R+ K IDE LL + + + ++ Sbjct: 667 --KQLKKFGMQVVQDQVWGRVSENREAHKSTRLYIDEMHLLLR--EEQTAAYTVEIWKRF 722 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 R+ G ITQN+ D AS + NS + +L Q+ + + P Sbjct: 723 RKWGGIPTGITQNVKDLL---ASREIANIFENSDFIYMLNQAGGDRQILAK--QLNISPH 777 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV-DPLSRAMYSSDGPDFEF 831 Q + A + F ++ + F D ++ ++ D Sbjct: 778 QLGYVTNSNAGEGLLFYGNVIIP-----FVDHFPKDTELYSIMTTRPEDLAE 824 >UniRef50_B3DVA0 Type IV secretory pathway, VirB4 component n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVA0_METI4 Length = 889 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 142/907 (15%), Positives = 299/907 (32%), Gaps = 109/907 (12%) Query: 12 VNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRD-YNQESGLFMNDTTMGF------ 64 +NSLV+ L+L S N + F ++ PY Y++ ++ D G Sbjct: 1 MNSLVSPLRLFIPSPLFNTKKMAV-FRDWADACPYVGLYDR----YIVDKFGGVHSFYKT 55 Query: 65 ----MLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQ-LVGDRIEYGLRE--- 116 + P A + + L +L T+LP I HL + G +E Sbjct: 56 YFPQVDIVSPSRLA--ELQDQLRLLL-TQLPHEIAQTQHLFTCNGDYGPLLEQFAAVPSD 112 Query: 117 ---FSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFI----SYCSPSK 169 S+ +A+R + T L + + + I S + Sbjct: 113 PLVESFRERKAKRLFQKMVKRKLVRIETHTVLTVAPQSRIKQTEWFLRIGGRESVEIERR 172 Query: 170 KKSRADILE----MENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 + S+A ++ + ++ AS +DA+ D + N + Sbjct: 173 RISKAQFDSAVASLQAAESVFAEIMKKASARFVPLDAREIADYFFRLWNPGLAVEEAMKV 232 Query: 226 QLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMAD 285 D Y + + ++ V D + +G + P +M Sbjct: 233 NYD-YERMPFVDSWMLQEVTVHKDMIQIG--------DYYHGLVSMVGLPLETRPRDMEK 283 Query: 286 NYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK---------------- 329 L ++L + ++ K + + +++ Sbjct: 284 LTVGLPFR------DVRVSLIVRKTEKTKEMEKLRKRIDWADQRMRLGLNLIDMLYKPHE 337 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 ++ + +E L + + SG+ ++ L + F E + + +LN Sbjct: 338 NRRESGIQNIEAWMQIEEAQNLLKDIRSGEDDLLQVQLTVH-FWHKQKEEVKKRAKILLN 396 Query: 390 SF----RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 F R G+ + + + ++ LP + L + A+L+PL Sbjct: 397 RFGDLSRAKGWI---EQSSLLPVLMSELPAVYAPLTRPLLVRGRM--------AADLIPL 445 Query: 446 -VADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 L L +D+ + + + + G G+GK+ L Q ++ L Sbjct: 446 CRGLESDEKPIHLFGNTTGGLVPLDLEDKRNEGASM-LYISGVKGSGKSALAQIIVLRHL 504 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDIDQSAERVRD---QL 558 + ++ D G+ Y L E GG + + FNPF T + E + +L Sbjct: 505 RPDSWLIILDKGNSYDRLVELSGGTTIRLDMATPKCFNPFEVYTQRNSKGELIEPSDHEL 564 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 + + L G L+ + L R + + + +A R+ Sbjct: 565 IKVVNCLEILATSQRGEPLRIEEKNILESLTRQTFSNAIKNRATYVTLDDFARQMAYRAD 624 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 + L + +G Y ++FN + K++ + + L A++ ++++ Sbjct: 625 AQFLAESLKAFV-DGRYKRWFNG-TTQVHWKTKVIHFDFEYISKDKDLAAALIPMAVLFV 682 Query: 679 ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 + + P + K+ V E W+ N I + ++T R+ A I +Q I+D Sbjct: 683 SDIILSHPH-VFKMLVFGEMWQ--HVSNPATANLIIEAFKTYRKKRCAIIGESQAILDLV 739 Query: 739 SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA-------A 791 + A A+A N I+ Q ++ ++ + + QRD++ + Sbjct: 740 DNPA--VAKAVIQNVDTWILFPQGSEHHIEFA-VKELELTKGQRDLLTHLRSCSRVHPDG 796 Query: 792 KDQWFSSFLLQVENH----SSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKE-GLSIHEAV 846 + + + S R ++P + ++ DF RK +++A+ Sbjct: 797 EVELWREAFYLRGRGPESLSGVIRAEIEPEEYWLTTTTPADFPAWDAARKAFPEEMNQAL 856 Query: 847 WQLAWKK 853 L+ K Sbjct: 857 ESLSAKY 863 >UniRef50_Q1JB81 TRSE protein n=26 Tax=Bacteria RepID=Q1JB81_STRPB Length = 809 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 111/828 (13%), Positives = 250/828 (30%), Gaps = 106/828 (12%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGA----NESIVEALD-HMLRTKLPR 92 ++P + ++ + + IN A + L+ L L Sbjct: 52 KSVQSVIPIKTIWEDGVFLVGKNKYAKTFKFEDINYAVASREDKEAMFLEYSELLNALDS 111 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLP 152 G I + R+ E + A+ R Y + L + Sbjct: 112 GATTKITI-----NNRRLNKADFEQTILIPMADDGLDKYRKEY-----NKMLLDKATGAN 161 Query: 153 LTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEM 212 ++ V +S C KK + + +DA + I + Sbjct: 162 AIVQDKYVTVSVC---KKNIEEARNYFARVGADLIGHFNRLGSKCVELDAGEKLRIFHDF 218 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 ++ + L +++ + DY +G L Sbjct: 219 YRTGEETGFAFDMLLSMRKGHDFKDYICPDTFEFEKDYFRIG--------DRYGRVIFLR 270 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY--------- 323 +++ ++ +L++ +V + E + Sbjct: 271 EYAAYIK--------DSMVAELCELNRNMMLSVDVVPVPTDEAVREVENRLLGVETNITN 322 Query: 324 -MDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALE 382 + ++ A +E++ KE E L + ++ L + E Sbjct: 323 WQRKQNQNNNFSAVIPYDLEQQRKESKEFLDDLTTRDQRMMFAVLT-MVHTAETKEQLDN 381 Query: 383 VEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANL 442 + +L + RK+ + ++ M T LPF +++ ++ + ++A Sbjct: 382 DTEALLTTARKHLCQFAVLKYQQMDGLNTALPFG--------VRKIDALRTLTTESLAVF 433 Query: 443 MPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS 502 +P G+ +N ++ I + N N + G SGAGK+ + + + Sbjct: 434 IPFRVQEIYHENGVYYG--QNVISKNMIIANRRHLLNGNSFILGVSGAGKSFTAKEEMTN 491 Query: 503 --VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDIDQ-------S 550 + D ++ D Y L + M G + N +D Sbjct: 492 IILTDPNADVIIIDPEREYSPLVKAMQGEVIHISATSESHINAMDMNSDYGDGANPVILK 551 Query: 551 AERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK------ENRARIDDVVDFLKNAS 604 +E + + N +L + ++ + + + + D + L + Sbjct: 552 SEFILSLCEQLIGGN-SLGAKQKSIIDRCTASVYRYYQQGNYMGTPPTLQDFREELLKQN 610 Query: 605 DSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRP 664 + E E+ + ++ +T + ++ ++++ ++ L Sbjct: 611 EPE-----------AQEIALAIELFTDGSLNTF---AKHTNVDTKSRLICYDILDLG--K 654 Query: 665 SLLVAVMFSLIIYIENRMYRTP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRH 723 L M ++ I NR+ + + IDE L F++ F+ ++ R++ Sbjct: 655 QLQPIGMLVVLDSILNRITQNRAKGRNTFIFIDE--IYLLFQHEYSANFLFTLWKRVRKY 712 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 ITQN+ D S AR NS + I+L Q++ + + +L LQ Sbjct: 713 GAYCTGITQNVDDLLQ---SHTARTMLANSEFIIMLNQASTDRLELAKLL--NISDLQMS 767 Query: 784 MIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP--LSRAMYSSDGPDF 829 I GA + LL+V + + ++ + Sbjct: 768 YITNVGAGQG------LLKVGSSLVPFVNQFPRNTELYRLMTTKFGEV 809 >UniRef50_Q9F525 TraE protein n=5 Tax=Gammaproteobacteria RepID=Q9F525_ECOLX Length = 785 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 111/859 (12%), Positives = 237/859 (27%), Gaps = 112/859 (13%) Query: 31 VLGEMSFPQFSRLLP-YRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTK 89 L +R P YR + +S +F +D M L I E+ L ++ + Sbjct: 5 KLKNSDNKDVAREYPDYRFHVTDSIIFTSDRKMLASLVVAGIPFETEND-NVLINLFNS- 62 Query: 90 LPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGM 149 + +G + L ++ + ++ L Sbjct: 63 -----VKNFLI----GLGKEGDLYLWTHLIKKRITIDGEWNFDNAFLSRFSKKY-LALFT 112 Query: 150 NLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIV 209 + + + + EM + + ++ D + Sbjct: 113 SSAFYKSTWYLTFGIPYDDVDTGIERMNEMTQQAQKALQPFNASVLSVHNTYISEVADYL 172 Query: 210 GEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF 269 ++N + + L + AD L L E+ S N+ Sbjct: 173 SLLLNTEHNMIPLSSTPLSSSI--------CDSEWYFGADVLELRNNESD--SKKFATNY 222 Query: 270 HLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK 329 L P + L FILT + + E KT + + L+ Sbjct: 223 ILKDFPIETTPGQW--------DFLLKQPYEFILTQSFIFESPTKTLKNIDSQLNKLQSA 274 Query: 330 SKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 + + + + +E ++ + +G + S +T F D + A + Sbjct: 275 ND--------AAKTQQEELEAGKEAVAAGITLFGSLHCALTVF-GDTPDQARSNGIKLSA 325 Query: 390 SF--RKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 F GF F + +P K + R N+A LM Sbjct: 326 EFITSGKGFRFSRASLASPFVFFSHMPLN---------KRRPLDTRRTITNLACLMSFHN 376 Query: 448 DNPLTPAG---------LLAPTYRNQLAFIDIFFRGMNNT------NYNMAVCGTSGAGK 492 + +G + T + + + + + + + + G +G GK Sbjct: 377 YSSGKKSGNPIGDGSAIMPLKTVSDSIYWFNTHYSPPEKSVTGQKIAGHGMILGATGTGK 436 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQ 549 T + V D + GG Y +G NP+ + Sbjct: 437 TTFEAAASGFLQRFDPLMFVVDFNRSTELFVRAYGGSYFTLQEGIYTGCNPWQLAEGPES 496 Query: 550 SAE-----RVRDQLSVMASPN--GNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN 602 ++ V+A N + H L AV + R ++D + Sbjct: 497 PVWHRLLAFLKRWTQVLARDNQGNPCSDEHGIELNAAVESIMRMPVEERRTALLLDIV-- 554 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR-DDAKMVVLELGGLE 661 E+ L ++ NG Y +S + K V + + Sbjct: 555 ----------------SPELQTRLAKWCDNGEYAWAVDSPRNTFNPLHHKKVGFDTTVVL 598 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN-VIDEGWRLLDFKNHKVGEFIEKGYRTA 720 D + + L+ + R + +I+E W +F I+ + Sbjct: 599 DTKNGIHPACEPLLAVLFFYKEIMQRGGNLMLSIIEEFWMPANF--PMTQSMIKSALKAG 656 Query: 721 RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL 780 R +Q+ D + + A ++ KI+L ++ Y ++ Sbjct: 657 RMKGEMMWLTSQSPEDAINC---AIFAALVQQTATKILLPNPDAKWEGYKEI---GLTEK 710 Query: 781 QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKE 838 + + + + L++ S + ++ + + S + E Sbjct: 711 EFEKLKELTKESRT----MLIKQSGSSVFAKMDLFGFDEFIPVLSGSETGLSIFDEIIAE 766 Query: 839 GLSIHE--AVWQLAWKKSG 855 + + +L + +G Sbjct: 767 KGDVAPDIWIPELLKRLNG 785 >UniRef50_Q84BZ9 Putative membrane-bound ATPase n=6 Tax=Spiroplasma RepID=Q84BZ9_SPIKU Length = 899 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 103/767 (13%), Positives = 238/767 (31%), Gaps = 81/767 (10%) Query: 74 ANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA 133 ++E + L + P+ + L D L++ + + I+ Sbjct: 152 SSEEQILRLRDLQEVIKFSNFPITFLKLELPLNFDDNIKYLQKQINKTQIRYKNKEISFN 211 Query: 134 YYMKAAATQFPLPEGMNLPLT-----LRHYRVFISYCSPSKKKSRADILEMENLVKIIRA 188 ++K + L ++ + F + + + ++ + + Sbjct: 212 QFVKITKQIKNNITFLKKELIKINDEIKTEKCFFIFVYGNSQ------KDLNEKILFLED 265 Query: 189 SLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRA 248 L I T+ I+ M N L + N + L ++ Sbjct: 266 KLYKGKINCNTLSNYEITKILKLMWNPYEKPLNKTNFNKNKD---NLAKLLQFKYLNIKK 322 Query: 249 DYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLV 308 +Y + P A +SN + + Sbjct: 323 NYFIAN--------DLYYSINTIQDYPLFINDLWGACLFSN----------EQTIIWNIN 364 Query: 309 VEDQVKTHSEANLKYMDLE-KKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFL 367 + +T N + ++ T E + + L + + + + Sbjct: 365 PLNYDETKKAINSAIQTTQTRQVMTKSYVNTNENNYELETYYHLIDEVNGDGELLKNVNI 424 Query: 368 NITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKE 427 + N +T + + + + ++ + + +P+ + K Sbjct: 425 LFLNY-GTNKKTLSQAQTRLTKALKEMDIKPNPLWYQQFNGLKGFIPYNNKVIIKK---- 479 Query: 428 AGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNNTNYNMAVCG 486 + + +A P + G+ T + D F TN+NM + G Sbjct: 480 --YGREMPTSTLAASFPFIDSGLYDKQGMWLGTNNMGNVVLWDQFKITSKRTNHNMFIIG 537 Query: 487 TSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---LRFNPFAN 543 SG GKT L++ +I + G +V D Y+ LC+ G ++D + NP Sbjct: 538 ASGMGKTYLLKKIINHHIKMGRKVIVIDPEREYQELCKYYDGNWIDAGDASIGKINPLQI 597 Query: 544 ITD------IDQSAERVRDQLSVMASPNGNLDE-----------------VHEGLLLQAV 580 + + + ++ + + L + L H+ + + Sbjct: 598 LDNNFIDELENTNSSPLSNHLRFLEQWFKTLYPDFNGREINLLTKYLKLLYHQFKITNNI 657 Query: 581 RASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFN 640 + + + ++D L+ + E+ ++ +D + + +G Y +N Sbjct: 658 DINKINNNDFPIMNDFYYLLEK---EYKNNENQLLKEFIDLIAT---DFLNDGKYQALWN 711 Query: 641 SDEPSLRDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRT--PRNLKKLNVID 696 +++ + +V ++ L D A + ++ I+ + N + + ++D Sbjct: 712 GH-TTIKFNNNFIVYDVYNLFDLDDKKTNAAQLILMLNIIKKEVKENRFKDNNEIVIIVD 770 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS-SAARAAWGNSSY 755 E +D N F+ + + R++ GA + TQNI DF ++ A NS Y Sbjct: 771 EAHLAIDKDNPVALNFMYQMTKRIRKYNGALVVATQNIADFVENETVLKKTTAIINNSQY 830 Query: 756 KIILKQSAKEFAKYNQLYP--DQFLPLQRDMIGKFGAAKDQWFSSFL 800 I+ + K LY ++D I + + +F S Sbjct: 831 SFIMGLKPNDLEKVINLYKSYGGLTSAEKDYIARSVKGQGLFFVSGF 877 >UniRef50_B9Y5S2 Putative uncharacterized protein n=11 Tax=Firmicutes RepID=B9Y5S2_9FIRM Length = 861 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 90/714 (12%), Positives = 204/714 (28%), Gaps = 85/714 (11%) Query: 60 TTMGFMLEAIPINGANE--SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREF 117 T+ + + + G ++ I E L I + + L SS Sbjct: 195 KTIAYADVSYRLAGPDDQRDIFERLCD-FYNGYDPSIGVQMTLSSSH------------K 241 Query: 118 SWSGEQAERFNAITRAYYMKAAATQFPLPEG-MNLPLTLRHYRVFISYCSPSKKKSRADI 176 + G+ ++A A+ + ++ V ++ + S +A Sbjct: 242 AGGGDLFRMAAQGDELDGIRAEASGILQTQYERGSNGYVKSKYVTLTIEAES---IQAAR 298 Query: 177 LEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQ 236 + + + +D + + ++ +++ + P + D + Sbjct: 299 ARFSRIEADTLNRFKVMGAAAKVLDGKERLALLHGLLHPRGE---PFAFEWDWLAP---- 351 Query: 237 CVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELS 296 S + G R +I + +L + Sbjct: 352 -SGLSVKDFIAPSSFEFGETRRFRMGEMY----GAVSFLQILAP----EIQDRILTDFMG 402 Query: 297 ISCPFILTLTLVVEDQVKTHSEANLKYMDL--------EKKSKTSYAKW--FPSVEKEAK 346 + ++T+ + +Q + K DL +K +++ Y + Sbjct: 403 MEGNLLVTMHVRGINQNEAIKMVKRKITDLDAMKIQEQKKAARSGYDLDILPSDLSTYGG 462 Query: 347 EWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 L Q L S + + + + + + + L F Sbjct: 463 AAKNLLQDLQSRNERMFNMTF-LMLHLAPTKQKLEIAVSQSASVAQTHNCILTRLDFQQE 521 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT---YRN 463 ++ LP L + + + +A +P V + Sbjct: 522 DGLMSSLPLG--------LNRIQIERSLTTSALAVFIPFVTQELFMGGDAMYYGLNALSG 573 Query: 464 QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRS-VLDSGGFAVVFDMGDGYKSL 522 + +D + N V GT G+GK+ + I +L + ++ D D Y L Sbjct: 574 NMILLD----RKQSRCPNGLVFGTPGSGKSMSCKREITYVMLTTKDNVIICDPEDEYSPL 629 Query: 523 CENMGGVYLDGETLR---FNPFANITDIDQSA-------ERVRDQLSVMASPNGNLDEVH 572 +GG + NP + + + V ++ L+ + Sbjct: 630 VNRLGGQVIRLSPNSRDYVNPLDINLNYSEEENPLALKSDFVLSFCELIMGSKTGLEAIE 689 Query: 573 EGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTAN 632 + ++ +AV+ + R + + SD + I D + LD Y Sbjct: 690 KTVIDRAVQKIYQPYFADPRP----ENMPILSDLMAALTAQHI-PEADRVAQALDLYVNG 744 Query: 633 GTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR-NLKK 691 F + ++ ++V ++ GL L M + + N + Sbjct: 745 SLN---FFNHRTTVDIRNRLVCFDIKGLGKN--LKKPGMLIVQDAVWNTVTVNRSIGRAT 799 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 +DE LL K + + + ++ R+ G TQN + + S Sbjct: 800 WYFVDEFHLLL--KEEQTAAYSAEIWKRFRKWGGVPTGATQNPRTCCTAQRSRT 851 >UniRef50_C5J6G0 TRSE-like protein n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6G0_MYCCR Length = 879 Score = 268 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 99/657 (15%), Positives = 225/657 (34%), Gaps = 75/657 (11%) Query: 175 DILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN 234 + ++E + ++++ +I +Q + + +++ + +N N ++ Sbjct: 223 EFKDLEFEIARLKSAFSQININSQKLKIEELLNLSIQTLNSNDKFP----------KEIL 272 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNF-HLARNPEIAFLWNMADNYSNLLNP 293 Q + ++ + + S + +F ++ P + + +++ Sbjct: 273 QQIKNEKKNIAKYFALDEISWKSKYFTSHNKFFSFQSISELPLELPPYWANNFFNSN--- 329 Query: 294 ELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKE--AKEWGEL 351 + + D+ + + N + L+ S+ + E + + Sbjct: 330 -------SNVIWNIQKIDEKEKNKILNKAHTILDINSEDKTQNIIDKKKGEFEQEAIENV 382 Query: 352 RQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT 411 +GQ+ Y + ++ E + +E + + G ++ + RF + ++ Sbjct: 383 IDIAATGQNLF--YSTFLFVNSANSKEDLINLENQNSHLVKSIGAKIHTLRFKQLEAYIN 440 Query: 412 CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT--YRNQLAFID 469 F+Q + N+A P + T + F D Sbjct: 441 SF--------FRQKDTLKEWIEMPANNIAYGFPFTTREFNDGNYNVLGTNFHDGTPLFFD 492 Query: 470 IFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGV 529 F + + N N+ + GTSG+GKT + + LI L G ++ D + Y L + Sbjct: 493 QFLQQDSRKNSNLFILGTSGSGKTTITKKLISYNLSIGNHVIILDPQNEYAKLGKLFNAN 552 Query: 530 YLDGETLR---FNPFANITDIDQSAERVRDQ-LSVMASPNGNLDEVHEGL---------- 575 + FNP + + +V++ L +++ L+ + + Sbjct: 553 IIHLNGSGQTVFNPLQIRKIFNPNDSKVKNTNLELLSLNISKLETFFKIIFPELNQISFM 612 Query: 576 -LLQAVRASWLAKE--------------NRARIDDVVDFLKNASDSEQYAESPTIRSRLD 620 L QAV + IDD++ +K A + I Sbjct: 613 ALKQAVEKLYEKFGFYELSDDITEYENTFYPTIDDLIQVVKEAEFDFLTKQEKNIL---- 668 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIYIE 679 + L ++ N G+ FN+ + + + L + + F + +I+ Sbjct: 669 -LASLKSEFNKNSILGKMFNNHSTNYNATQNFAIFNVAALMQLDKKIYQSAFFLTLSFIQ 727 Query: 680 NRM--YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 + + N K + V+DEG + +D N F+ +T R++ G I TQN DF Sbjct: 728 GEISDFYMQDNKKIILVVDEGHKFIDESNLFALNFLFDTAKTIRKYNGGLIITTQNPGDF 787 Query: 738 -DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPD--QFLPLQRDMIGKFGAA 791 + +A+ + A N Y I +K+ K + LY + +++ I Sbjct: 788 AITGEAARKSEAIIENCQYSIFFNLKSKDIEKIDNLYKNVGGLSEDEKNFISLAQIG 844 >UniRef50_Q7M993 VIRB4 HOMOLOG n=1 Tax=Wolinella succinogenes RepID=Q7M993_WOLSU Length = 762 Score = 268 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 101/837 (12%), Positives = 247/837 (29%), Gaps = 104/837 (12%) Query: 26 AKANEVLGEMSFPQFSRLLPYRD-YNQESGLFM-NDTTMGFMLEAIPIN--GANESIVEA 81 + E+L + Y++ +G+ + D E ++ G EA Sbjct: 5 PRFLELLISKPMHSIAEDNNIIGIYDRSAGIIVTKDDNYAIGFEIGGLSYGGLTPEDEEA 64 Query: 82 LDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAAT 141 L + + RI+ +++ S S E R + ++ Sbjct: 65 LHLTRK-----------IFFAKNNPNIRIDISVKKESLSLEHHARAKNPHSSRIIQRWEN 113 Query: 142 QFPLPEGMNLPLTLRHYRVFISY--------CSPSKKKSRADILEMENLVKIIRASLQGA 193 F + + +S+ + + S I ++++ K++ L Sbjct: 114 NFNAYRLSYYLILSTKNKGILSFLEEKREKMTTEGGENSLYKIEQLKDAAKMLELYLG-- 171 Query: 194 SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTL 253 + +D + +++ N +P +L + S ++ + + DY+ Sbjct: 172 RFRPRALDGEELMNVYASYCNMSP-TLCSYKDGYLRDSYIDSNIL-------FKRDYII- 222 Query: 254 GLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQV 313 S + + + S++L+ +I + + + Sbjct: 223 ---HERDGSEIYSRYIAIKAY-------DTEEISSSILSTLFNIPVSMNVLFQIQSISKE 272 Query: 314 KTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 + + K + E E L + L S + ++ + + Sbjct: 273 SVLWKVSQKIKMNSQN------------ELVVAELDTLLKELQSDREMLLYFSFAVMVSA 320 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 K E + ++ + G + N + + P +L+ + + Sbjct: 321 K-TQEELNQRCNEVKAALVAKGLIAVRETLNQQPLYFSFFPG-RTINSRTRLQSSTAIST 378 Query: 434 AESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNN-TNYNMAVCGTSGAGK 492 +F ++ ++ + F + + N + V G + AGK Sbjct: 379 ILTFE-KDIEGFSQNSWGESPVTIFKNITETPYFFNFHMSPGKDCPNGHTLVIGNTYAGK 437 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG-ETLRFNPFANITDIDQSA 551 T + L+ + D G + C +GG Y D + R NPF+ +++ Sbjct: 438 TTFMSFLMTCLTKFEIDIFALDKLRGMHNFCTFLGGDYSDINDEFRLNPFSLAP-THENS 496 Query: 552 ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAE 611 + L ++ + + E + + + EN + D + L+ + + + Sbjct: 497 LFLNSFLRLLGNIDEREYE-EVNAIADTLERIYENSEN-ITLLDFYESLERVPNLKHRYK 554 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVM 671 F + +L ++ +L + + + Sbjct: 555 ---------------------SHLDGIFAHPDDALSFQKQITILNMDSVLKDEIKASHLA 593 Query: 672 FSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 + + I + + +DE L N + + + R+ G Sbjct: 594 YYVFHKILYQAKTKGKG--AFVFVDELKDYL--ANDVMAHKLLETILEIRKLNGVVALGV 649 Query: 732 QNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAA 791 QN+ FD+ K A + + ++ I + E + + P + + Sbjct: 650 QNLDFFDNIKN---ASSWINSMAHFAIFPTTNTESIQ----KHIELTPAELRFLKNTNPL 702 Query: 792 KDQWFSSFLLQVENH--SSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKEGLSIHE 844 + + L + N S + + L + +SS D ++ EG E Sbjct: 703 ERK----LLWKNANTKESVILDVNLSRLREYLRVFSSSAEDVLQMKALLAEGEGWRE 755 >UniRef50_C5ETG4 TRSE protein n=21 Tax=cellular organisms RepID=C5ETG4_9FIRM Length = 798 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 113/821 (13%), Positives = 239/821 (29%), Gaps = 109/821 (13%) Query: 52 ESGLFMN-DTTMGFMLEAIPING---ANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVG 107 + G+F N + IN + E L + + I + + Sbjct: 36 KDGIFENTKNRYSRVYRFADINYVTVSEGDQYEILKQYCKLVNAIDVAFKITIYNKNRNM 95 Query: 108 DRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSP 167 + + + + A + + + F++ Sbjct: 96 SQFRQNVLIPDKDDGYDHLRDVYNDIVEERIVAGKQGIEQER-----------FLTVTVE 144 Query: 168 SKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQL 227 K ++ + +DA + ++ + + Sbjct: 145 RK-DYEQAKAFFNTFEGGMQQEFHAIGSKLEPLDAAERLRVLYNFYRIGDEETFSFDFDA 203 Query: 228 DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY 287 S +Y+ +K + + R P Sbjct: 204 YVKSKTDYKNDICGSMIKYSPNDFETD--------RKICRAVFIRRYPT--------SLP 247 Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY----------MDLEKKSKTSYAKW 337 +N ++ I ++ +V + T KY + K+ + Sbjct: 248 DTFINEITNVPVHSITSIDIVPVPKDLTTRTLQKKYLGVESDILRQQRVRNKNNDFASDI 307 Query: 338 FPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFE 397 + E K L + ++ +N+ D E + + I K Sbjct: 308 SYGKKVEKKTLEALMDDVRENDQNLFFAGVNMVLIA-DTREELNSITETIQTIGNKYLCN 366 Query: 398 LISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLL 457 + T LP + ++ + ++A LMP P GL Sbjct: 367 MEVHHLQQREALNTALPVGVRQ--------VETMRTMLTRDIAALMPFNVQEIYEPTGLC 418 Query: 458 APTYR--NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQP-LIRSVLDSGGFAVVFD 514 T R L D TN N V G G+GK+ + ++ L +G +V D Sbjct: 419 YGTNRISKNLCVAD----RKKLTNGNAMVFGVPGSGKSFFCKSEMLGVYLQTGDDIIVID 474 Query: 515 MGDGYKSLCENMGGVYLDGETLR---FNPFAN---ITDIDQSAERVRDQLSVMASPNGN- 567 Y + +N+GGV ++ NP D+ S +RD+ M Sbjct: 475 PTLEYFDIAQNLGGVCINLSNYTQNYINPLWLDVNELDLADSKGLIRDKGEFMLGLCEQA 534 Query: 568 ----LDEVHEGLLLQAVRASWLA-----KENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 L+ H+ ++ + +R +L ++ + D D L + E Sbjct: 535 MSEMLNSRHKSIIDRCIRKLYLDIAMSKEKYVPVMSDFYDLLMKQPEEE----------- 583 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYI 678 ++ + L+ + + FN + +L D + +V + L L M ++ + Sbjct: 584 ARDIALGLELFVSGSL--NIFN-HQTNLDVDNRFIVYGIRDLG--KELSAIAMLVMLENV 638 Query: 679 ENRMYRT-PRNLKKLNVIDEGWRLLDF-----KNHKVGEFIEKGYRTARRHTGAYITITQ 732 R+ R + IDE LL ++ G+F+ ++ R+ G ITQ Sbjct: 639 RARIARNAEKGRATWLYIDECHVLLGTGEHSGRSEYSGKFLYSLWKKVRKQGGLCTAITQ 698 Query: 733 NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 NI D + A NS + +LKQ+ + + +++ + Sbjct: 699 NISDMLQNY---TAVTMLANSEFIALLKQANVDSQELSRVAGIPE--------AQLKYVN 747 Query: 793 DQWFSSFLLQVENHSSWH--RLFVDPLSRAMYSSDGPDFEF 831 +L+ R+ + + +++++ + Sbjct: 748 GCNSGMGILKHGEVIIPFDARVKKNNIIYDLFNTNLHEKNK 788 >UniRef50_Q601R8 Transfer complex protein n=7 Tax=Mycoplasma RepID=Q601R8_MYCH2 Length = 880 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 127/802 (15%), Positives = 251/802 (31%), Gaps = 100/802 (12%) Query: 42 RLLPYRDYNQESGLFMNDTTM---GFMLEAIPINGANESIVEALDHMLRTKLPRGI-PLC 97 LLPY Q+ F+ G + I +E + L L + Sbjct: 105 NLLPYTRAKQD---FIKVGGGFVGGIEINGQDIFSIGTEKIEQILQQLTVSLNAISNRIS 161 Query: 98 IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 I ++ D + L + E E Y A H Sbjct: 162 IVKIAHPN--DLTKNKLFFLRYQDECLENLGENLCLEYKNDIANFDTYL----------H 209 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNP 217 +R FI + + + V ++RA++ + + +D+ ++IN N Sbjct: 210 HRYFIIV-------YEKNDVSLLQQVSLLRANISSTGFRARIAPLRDLLDLNLKIINFN- 261 Query: 218 DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEI 277 + N D + + + EN + + + P Sbjct: 262 --------DFLNDEEFNNIRNGDDISKYLAQNKIEW-YPENFKINDIYFSVQSINEYPFN 312 Query: 278 AFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKK-SKTSYAK 336 L A +S + L + + N +LE + Sbjct: 313 LPLGWAAQLFS----------TNSSVVWHLNRLTATEKENSFNKGAKNLESNLNDQKNIV 362 Query: 337 WFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGF 396 E E+ GS + + I + E+E N+ R G Sbjct: 363 QKTKTATERAALEEIISIAGSSREEIFYSTF-IFLNTAETKNQLKEIESQNRNNLRNIGA 421 Query: 397 ELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGL 456 + ++ ++ F + F+ + N+A +P + N Sbjct: 422 TINPLKYRQLQGFASLF--------FRFSNFLKEEIEMPASNIAFGIPFTSRNFNDGNYN 473 Query: 457 LAPTYR--NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFD 514 + + F D+F + + N N + GTSGAGK+ + + L+ +V D Sbjct: 474 IIGVSKTDYTPVFFDLFRQNQDRKNSNCFILGTSGAGKSTMTKKLLTYNKAINNSVIVLD 533 Query: 515 MGDGYKSLCENMGGVYLD---GETLRFNPFANITDID-----------QSAERVRDQLSV 560 + Y + +N+ ++ G+ FNP + ++E + L Sbjct: 534 PQNEYWKIGDNLNANRINFGGGDLTIFNPLQIQKVFNPQSKQEEAEDFNNSETIALHLQN 593 Query: 561 MASPNGNLDEVHEGLLLQAVRASW------------------LAKENRARIDDVVDFLKN 602 + G L E ++ AV + L + I D++ + Sbjct: 594 LEKFFGILLPNLEHKMVMAVIETINEMYKNRGFYVLFEDVCLLEPDKFPTITDLIQKFQE 653 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED 662 + TI + L ++ G + FN +L +V+ + L Sbjct: 654 LNFDYITDFEKTII-----LSTLRYEFNQYGKLNRLFNGHSTNLDISRGLVIFNVSTLMH 708 Query: 663 -RPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 + + F ++ +IE ++ +N K + ++DE R +D N +F+ K +T Sbjct: 709 LEKRIYQSAFFLVLSFIEGKIATNFYKNQKIVLIVDEAHRFIDESNTIALDFLFKIAKTI 768 Query: 721 RRHTGAYITITQNIVDF-DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY--PDQF 777 R++ G+ I TQN DF S +A+ + A N Y + + K ++L+ Sbjct: 769 RKYNGSLIITTQNPGDFAISGEAARKSEAIIENCQYAFFFNLKSNDIEKVDKLFSSSGGL 828 Query: 778 LPLQRDMIGKFGAAKDQWFSSF 799 ++ I + + S+ Sbjct: 829 TNEEKKFIALAQIGEFIFSSNL 850 >UniRef50_A6ASB7 Conjugal transfer protein TraE n=3 Tax=Vibrio harveyi RepID=A6ASB7_VIBHA Length = 776 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 120/848 (14%), Positives = 262/848 (30%), Gaps = 116/848 (13%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESI------VEALDHMLRTKLPRG 93 + L Y + L ++D+ + + I +ES E + ++L T L R Sbjct: 11 LTDLPAYGYPINRTMLSLDDSKIMATISLNGIPFESESYNTLKPSFELVKNILST-LARK 69 Query: 94 IPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPL 153 + + + + R E + + +M+ + ++ Sbjct: 70 YGSQLAIWTH--IVKRKERFEANYR------------FESDFMQRFSDRYLQDFSGEDFF 115 Query: 154 TLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGA---SITTQTVDAQAFIDIVG 210 ++R+Y I++ K E+ +++K + A+L+ + I+ + Sbjct: 116 SVRYY---ITFVLNYKGTLTEGEDELGDILKTVSAALKRFDSKELEVGDDHRCEHIEFLS 172 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 ++N+N + + + L +R +T F Sbjct: 173 YLLNYNDQPKP------LTSEKVRNYIGHSDWHF----GHDLLEVRNANNEATKFATFFE 222 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 L P + + + LS FILT +++ +K + + +E Sbjct: 223 LDALPIATEM--------GMWDFILSQPTEFILTQSMIFMQSLKAQKMIDRQTNFIESSD 274 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 T E E +E R + SG S Y ++ D+ + + D+ Sbjct: 275 NT---------EHELEELQAARDYVASGAVSFGDYHASLAVI-GDSPDKVIIDSADLNGQ 324 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 F G L +FL+ LP + + + A ++++ N Sbjct: 325 FLAKGTVLKRSNLKSQFSFLSALP---ASKMRIKPSPRTIANLASTWSLHNYS--TGKAS 379 Query: 451 LTPAG-----LLAPTYRNQLAFIDIFFRGMNNTN------YNMAVCGTSGAGKTGLIQPL 499 P G + T N L ++ + N + + G SG+GKT L L Sbjct: 380 GNPVGDGSAIIPLKTLSNSLFHMNCHASAIGKDNTGEKSAGHTMILGASGSGKTTLEATL 439 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRD 556 D + GG Y +GE NPF + R Sbjct: 440 TGFFTRFHQQIFCIDYKRSTELFIRAFGGEYFSIKEGEDTGINPFQLENSPKLVSFLNRL 499 Query: 557 QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIR 616 + G++ E + A+ + + ++ ++N Sbjct: 500 VCRLAQDSQGHISAHDEQEIKDAIDSVMTFDAPMRGLSMMLQSIQNP------------- 546 Query: 617 SRLDEMIVLLDQYTA--NGTYGQYFNSDEPSLRDDA-KMVVLELGGLEDRPSLLVA---- 669 ++ + L ++ NG +S A + + L ++ S Sbjct: 547 ----DLRMRLSKWCRSENGKLAWCLDSPHNQFNPKAMDRIGFDSTLLLEKDSSGHVHPAS 602 Query: 670 -VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 + + + +++ M + + L+ +++E W +F +++ +T R + Sbjct: 603 EPVLACLFFLKELMQESGKLLQT--IVEEFWMPANF--PLTQAVMKRALKTGRLMNEFMV 658 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKF 788 +Q+ D + A ++ K+ L E+ Y Q + + + Sbjct: 659 LSSQSPEDAIHCEIFP---AIVQQTATKVYLPNPDAEYDAYQQC---NLTKGEFNKLKAL 712 Query: 789 GAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM--YSSDGPDFEFVQQKRKE-GLSIHEA 845 L++ N S + +L + + S D + R E G Sbjct: 713 DKQSRT----MLIKQSNTSCFAKLDLGGFDEFLPIISGSTDDIVLCETIRAEIGNDPDLW 768 Query: 846 VWQLAWKK 853 + +L ++ Sbjct: 769 IPELLKRR 776 >UniRef50_D1PRT5 TRSE protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT5_9FIRM Length = 779 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 118/844 (13%), Positives = 268/844 (31%), Gaps = 98/844 (11%) Query: 19 LKLPDESAKANEVLGEMSFPQFSRLLPY-RDYNQESGLFMNDTTMGFMLEAIPINGA--N 75 +KL + ++ N G + + +P R Y+ G++ + M IN A + Sbjct: 1 MKLNEYASTRNTWGGVNTPKSVQKSIPVDRIYDD--GMWRSGNVYSQMWSVSDINYAMVS 58 Query: 76 ESIVEALDHM---LRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITR 132 + + + + L +P + + + SQ + D + + + + + A Sbjct: 59 DGKKDEIQQVYGKLYAGVPSDCTIKM-CIVSQRMDDLVFRRDVLYHRANDGHDDLRAEKN 117 Query: 133 AYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG 192 A+ + + + ++ + RV + + + L Sbjct: 118 RQLAACASLVGNVLQSKYVIVSTQKNRV------------EDARDRLRQVQGHLVNILSE 165 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 T ++VD + I+ +S + + + + F V D + Sbjct: 166 LGSTVRSVDNSERLRILHNFFRVGEESRF-------EFDLDRCTKLGEDFRDFVAPDVIE 218 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC-PFILTLTLVVED 311 ++ ++ P+ + + L++ P Sbjct: 219 FKRDHIDIDNRVA-KCMSMSYFPQRIDDKLVTTLLQQVPYIILTMDFVPIETEDAYKTLA 277 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFPS-VEKEAKEWGELRQRLGSGQSSVVSYFLNIT 370 + +A+ + + + P ++E + ++ + + L + Sbjct: 278 DYRMKVDADKVRFNRKSVDNLDFTANVPQRTQEEENTLNQWQRDMTDNDQQMFLTLLTVA 337 Query: 371 AFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGV 430 F D+ E + + + R+ F T +P+ L+ Sbjct: 338 YFA-DDLEELRQETDALKTAAGNYNCRFTEMRWQQENAFNTAMPYG--------LRRIAN 388 Query: 431 VQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTS 488 ++ + VA+L+P L P G+ + N N V TS Sbjct: 389 LRAMTTKGVASLIPFNTQEVLVPGGIYYGVNAISGNIII----GLRTVLINGNAMVIATS 444 Query: 489 GAGKTGLIQPLIRSVLDS--GGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN 543 G GK+ ++ I + + D + Y L +GG+ +D T FNP Sbjct: 445 GGGKSLFVKQEILELFLRFLKAKFYIVDPENEYGPLVRELGGIVVDIAVDSTTYFNPLDF 504 Query: 544 ITDIDQSAERVRDQLSVMASP------NGNLDEVHEGLLLQAVRASWLA------KENRA 591 D + + + S N+ + L+ ++++ + K Sbjct: 505 TYDPSTKIQPHTAKAEFVLSLCEQIMGKDNIQAGDKSLIDRSLKHIYKPLIKSGYKIACP 564 Query: 592 RIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAK 651 + D+ + LK R E+ + L+ + F + ++ + Sbjct: 565 TLTDLYNDLKEQP-----------HERAHEIALALELFATGSM--NMF-AHPTNVDMSNR 610 Query: 652 MVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK---LNVIDEGWRLLDFKNHK 708 ++ + L D L M S++ YI + RN K DE + LL + Sbjct: 611 LICFNIQSLGD--QLKPVAMLSMLEYINTCVMSNERNDPKAATWVYFDEIYLLLR--DKL 666 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 +F+ ++ R++ ITQN+ D S+ A A NS + +L+Q+ K+ Sbjct: 667 SSQFLYTSWKRFRKYNAYATGITQNVQDCLSN---DTAYAMLANSEFVCMLRQT-KDIDS 722 Query: 769 YNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWH--RLFVDPLSRAMYSSDG 826 +LY Q++ + + +L++ N+ + + ++ Sbjct: 723 VVELY--GLSDPQKNYLKLAKPGQG------ILKMGNNLIPFVNDHPTNTKIYRLLTTKP 774 Query: 827 PDFE 830 + E Sbjct: 775 GEME 778 >UniRef50_C6LA09 Putative TRSE protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA09_9FIRM Length = 835 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 102/833 (12%), Positives = 251/833 (30%), Gaps = 78/833 (9%) Query: 63 GFMLEAIPINGANESIVEALDHMLRTKLPRGIP-LCIHLMSSQLVGDRIEYGLREFSWSG 121 ++ ++ E + T L I ++++ DR+ + + G Sbjct: 53 AYLFLDTNFATMDDYEKEDFLKLYCTVLNSMSVSFKIEIINNNWNMDRVRQDIFLHNRDG 112 Query: 122 EQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMEN 181 E ++ R + + + R+FI C K + Sbjct: 113 RFGEMVESLNRHIEDSMMKGRAGIEQ----------VRLFIITCRR--KNIEQARNYFVS 160 Query: 182 LVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN-YQCVED 240 + + + +DA + + ++ Y + + + Sbjct: 161 VEANLAVNFDRMQSGLVPLDATERLRYLHAFYRQGQETKYDFDFKTAIRRGTDWRDIISP 220 Query: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 + + +Y T + + ++ + P + S + L++ Sbjct: 221 AVVKHYQDEYGTFDGITVQMDG-TYVRALYVPQLPNSIEPGIIQKLMSGPYHVILTLDTA 279 Query: 301 FILTLTL--VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 I + + D ++ A K K+ + +E E + Sbjct: 280 AIPKQAVKKRLIDLYVQNARAIEKQQQTRNKAMAWSSDITYERRRERDELENYMDIVNEN 339 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + + + + GF + + T LP A Sbjct: 340 DEKMFYLGIYAVISAG-SKKQLENDVTAFCSMAEGEGFSFEPAIWEQIEAINTALPTGAR 398 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMN-N 477 V+Q + + L P V P GL + ++ Sbjct: 399 --------FCSVMQPVFTQPLCALTPFVVQELYQPGGLFYGINQ---VSKNVLIGDRKLL 447 Query: 478 TNYNMAVCGTSGAGKTGLIQP-LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG--- 533 N N + G +G GK+ + +I+ L + ++ D + Y+ + + +GG ++D Sbjct: 448 KNGNGFILGITGGGKSVETKMEIIQVYLHTTDDIIIIDPQNEYRDIVDYLGGTFIDFGAE 507 Query: 534 ETLRFNPFA--NITDIDQSAERVRDQLSVMASPNGN-----LDEVHEGLLLQAVRASWLA 586 NP ++ + + D+ +M + + + L+ + VR + Sbjct: 508 SGHYINPLDTGTYEYMESKRKFIADKTELMLAIFSQILEYEISAQDKSLIGRCVREVFAD 567 Query: 587 KENRAR-----IDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNS 641 +++ +V++ + + + + + LD + Sbjct: 568 MDDKTGRKKRQPPTLVEYYECMKRQREPQAAQLALALELFVSGSLDMFAR---------- 617 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWR 700 + ++ A++ + L S + ++ I +R+ + ++E Sbjct: 618 -QTNVDTRARLTAYGMENLGKEQS--ATGITVMLEGIRSRIAENAAKGRATRLYVEEFHN 674 Query: 701 LLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILK 760 L + +EK ++ R+ G ITQNI D S A NS Y +L Sbjct: 675 LAG--DPYSANILEKRWKEVRKMGGLCTGITQNIRDLTQ---SKAIETMLCNSEYLSLLC 729 Query: 761 QSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSW--HRLFVDPLS 818 QS E + +++ K+ LL+ + R+ D Sbjct: 730 QSDIEIDIFRRIFGISEN--------LLAYLKNAESGCGLLKFGDRYIPKDGRIPKDSEM 781 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSI---HEAVWQLAWKKSGPEMASLEAWLEEH 868 +++++ + + ++K++ S+ +A+ +L ++ E + Sbjct: 782 YRLFNTNFHEIQAQKRKKQRTGSLQKQVDALPELVLSEAEAHPTEAEQIYQRK 834 >UniRef50_D1WC41 ATPase n=9 Tax=Lactobacillus RepID=D1WC41_9LACO Length = 675 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 97/687 (14%), Positives = 211/687 (30%), Gaps = 87/687 (12%) Query: 203 QAFIDIVGEMINHNPD-SLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 ++ ++ ++++ + K Q+DP +N ++ ++L + G Sbjct: 5 ESLQNLGDKILHRESTVNTQIKEPQIDPTQVINDAGIKRLLRDGYDVEFLVKTQPQGGIT 64 Query: 262 -------STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 ++ + P + ++ + + + + Sbjct: 65 FDDDHAIGDGYSACVNILQYPTDPNILWATQVM---------LNDSTVAIMDVKTASSER 115 Query: 315 THSEANLKYMDLEKKS-KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFC 373 SE N +L ++ A + ++ +L + I + Sbjct: 116 LKSEINRSLQELGDQATNGRKATSMSDAQDNYQDLMDLSSSISRQGEIPKKIVSRIFVYA 175 Query: 374 KDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQR 433 E+ E +D++ S + N F F + + ++ A Q Sbjct: 176 P-TIESLQEKIRDLIKSLKGNDFRATVYNFTQADQYKS---MTQKLTKQERSFAAVPEQI 231 Query: 434 AESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNNTNYNMAVCGTSGAGK 492 + + P + P G+ T D F ++NM V G GAGK Sbjct: 232 MPARTLGFGNPFSFQSLKDPRGIPLGTTSAGGAFIFDQFRSTNTRRSFNMMVLGKMGAGK 291 Query: 493 TGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPFANITDIDQS 550 + L++ L + D Y L +GGV + DG NP + + Sbjct: 292 STLLKMLTEGSFARNMYWRGIDKSGEYVRLVRALGGVVVNLDGSEGMINPLEVMATVTDK 351 Query: 551 AERVRDQLSVMASPNGNLD-----------EVHEGLLLQAVRASW--------------- 584 +V D+++ + E+ +R+ + Sbjct: 352 EGKVVDEVASFMQHLDKVSVLFKMVNRDFAEIEIQDFKNILRSFYIYYGLLPKDWQRNPG 411 Query: 585 ------LAKENRARIDDVVDFLKNASDSE---QYAESPTIRSRLDEMIVLLDQYTANGTY 635 ++ + ++ + E SP R +++ + ++ N Y Sbjct: 412 KVRLTGKDPQDYPTFSEFSRYVDKCNSEEYLSAIHASPQRRRTFEKIKIGVEAMIDN--Y 469 Query: 636 GQYFNSDEPSLRDD-AKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN- 693 GQ F+ K+V+ + + ++ S+ A +FS + I N+ + R L Sbjct: 470 GQMFDGHSSMKDLSREKVVLFDTSTVANQGSVYQAQIFSTLSLIWNQALQNGRRQNYLLD 529 Query: 694 --------------VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 V+DE ++++KN +I+ R R+ I TQ+ + Sbjct: 530 NGVITNDEISYFDVVLDECHNIVNYKNMNAVTYIKDFEREMRKFNAGIIFATQSPEEMVP 589 Query: 740 DKASSAARA----AWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW 795 DK +S ++ + + K+++ + AK +L D +P I W Sbjct: 590 DKVNSVEQSDLKVVFDLCAIKVMMAMENSQLAKIKKLLGDSLMPSDYSEIPSLTTGNAIW 649 Query: 796 FSSFLLQVENHSSWHRLFVDPLSRAMY 822 DP ++ Sbjct: 650 -----TLGSGQRYKVTNNPDPEQLKLF 671 >UniRef50_C1F578 Type IV secretion/conjugal transfer ATPase, VirB4 family n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F578_ACIC5 Length = 789 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 134/836 (16%), Positives = 279/836 (33%), Gaps = 99/836 (11%) Query: 42 RLLPYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIVEA----LDHMLRTKLPRGIP 95 ++P + E + G F L I G + +EA L+ L LP G Sbjct: 23 SIVPIARFVNEHIFALKGGGYGCLFSLAGIDEEGLTDPELEARMRSLEGAL-HGLPEGSC 81 Query: 96 LCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTL 155 L + R+ G Q T ++ LT+ Sbjct: 82 LYQYT--------RLMSGFELPRRPHYQNPVTQVFADDRLTFLERTAGFRRIDLHWCLTI 133 Query: 156 RHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG---ASITTQTVDAQAFIDIVGEM 212 R I K+ AD M ++ L+G +S+ + + A + Sbjct: 134 EPPR--IKAFQQKPKELAADTSRMLAELEKTATILEGHLGSSLGLRLLGKDAAFQFFSYV 191 Query: 213 INHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLA 272 N + + QL + ++ Q V++ + +D+L +G R + F L Sbjct: 192 FNLE---EWAEDDQLRANTGVDRQIVKNP--ITWHSDHLRVGKR--------YVQMFSLK 238 Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM-------- 324 PE + L + L++ C I+ T + SE + + Sbjct: 239 ATPEASRP--------CLFSSLLTLDCDSIVCSTWRPKSTAAARSEIDAQEKFISFFKVG 290 Query: 325 ---DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 + T+ + + +L + + S + ++ E Sbjct: 291 VLTRVMSGRDTASLETGAGAKAANSSVDDLSEVIRSLDKKSQGEYSLRLLLAANSPEHLR 350 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 + + +F ++I ++ F P +F R S + Sbjct: 351 DTIPAVHRAFVDARTQMIEESLGNLSAFYAMFPGNGKFNVFPLWLSEDHHARLSSIFAPH 410 Query: 442 LMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIR 501 L +++ + T F D++ G+ M + G +G GK+ LI Sbjct: 411 LGHPHSEDLDAEYLNVFETRTRTPFFQDVYVDGVRV----MLILGPTGTGKSVHGNQLIA 466 Query: 502 SVLDSGGFAVVFDMGDGYKSLCENMGGVY--LDGETLRFNPFANITDIDQSAERVRDQLS 559 GGF+ +FD+G Y+S+ E GG + + R NPFA + + + + + Sbjct: 467 LEQKYGGFSYIFDIGGSYESVVELYGGRVDRIGKDGPRVNPFALEP-TESNLKFLYTFIR 525 Query: 560 VMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSR 618 ++ + G L+ + ++ +AV+ +L R+ ++ Sbjct: 526 LLLANGGAELEPEDDDVIHKAVQDMYLLDRENRRLSNLY--------------------L 565 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRP--SLLVAVMFSLII 676 ++ L ++ +G Y F++ E L +++ + G+ + L+ +M L+ Sbjct: 566 PKKLDRYLSKWVRDGVYHAIFDNVEDGLSL-SRVQCFDFAGVNNEQYADLIEPLMVWLLR 624 Query: 677 YIENRMYR-TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 735 I + ++ + K +I+E KN ++ E +T R++ G I Q+ Sbjct: 625 RINDVLHDPANLGVPKHILIEE--LFPSMKNRQLLEGALSSIKTVRKNLGGVTLIGQSAE 682 Query: 736 DFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQW 795 D + A + + S ++LK +Y +L+ Q + + Sbjct: 683 DLGEN-----ADSIVNSCSSFLLLKDPTFNRKRYAELFR--MNEQQLALFESLQDREA-- 733 Query: 796 FSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAW 851 ++ + + L +D S A +S+ D + + + E + + A Sbjct: 734 ---LYIRRDGLTKVVILNLDSRSYATFSTKPKDRVRRSKLIAKYG-LAEGIDRFAQ 785 >UniRef50_A6EBE8 Conserved protein found in conjugate transposon n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBE8_9SPHI Length = 514 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 85/494 (17%), Positives = 171/494 (34%), Gaps = 30/494 (6%) Query: 385 QDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMP 444 Q I + + +P A + V + + Sbjct: 32 QKIRQLLAGMDAVARQETDGAAQIWWAGIPGNAADFPVNDTFDTFV------EQASCFLN 85 Query: 445 LVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNN---TNYNMAVCGTSGAGKTGLIQPLI 500 + ++ G+ + ++D+F + M TN N+ +CG SGAGK+ ++ Sbjct: 86 MESNAKSDGTGIRFGDRSFGRPVYVDLFDQPMKTGVVTNRNLFICGGSGAGKSMACNHML 145 Query: 501 RSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPF----ANITDIDQSAER 553 R++ D G V D+G YK LC+ +GG Y + ++FNPF ++ DI++ Sbjct: 146 RTLYDEGTHCVTIDIGGSYKGLCDLVGGYYFSYTEENPIKFNPFFIGTDDVLDIEKKESL 205 Query: 554 VRDQLSVMASPNGNLDEVHEGLLLQAVRASW----LAKENRARIDDVVDFLK-NASDSEQ 608 L++ + + A+ + + DFL + Sbjct: 206 KTLLLALWKRDGEHFSRSEYVAISGAITLYYEYLAENSSVFPGFNSFYDFLMLEYMQVME 265 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLV 668 + L ++ +L+ Y G + N+ E + + +V EL + L Sbjct: 266 NGKVKEKDFDLGNLLYVLNPYYKGGEFDYLLNATENLDLLNERFIVFELDNIRSHEVLFP 325 Query: 669 AVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYI 728 V ++ ++M R + +K+ IDE W + + FI+ ++T R+ G Sbjct: 326 VVTIIIMEMFISKM-RKLKGQRKILAIDEAWVAI--AKTGMSHFIKYLFKTVRKFNGIAA 382 Query: 729 TITQNIVDFDSDKASSAARAAWGNSSYKIILKQSA--KEFAKYNQLYPDQFLPLQRDMIG 786 ITQ + D S S KI+L +F K + + Sbjct: 383 LITQEVDDLISSPI--IKETVINLSDTKILLDMRKFMNKFDKLQETLGLSDKAKALLLSV 440 Query: 787 KFGAAKDQWFSSFLLQVENHS-SWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEA 845 K + + + S +R + Y+++ + V + ++ S+ + Sbjct: 441 NKANEKGKNYREVFIDQGGQKLSVYRNELSVSEYLAYTTEESEKLRVMEYAEKYGSMEKG 500 Query: 846 VWQLAWKKSGPEMA 859 + LA + + Sbjct: 501 ITILAEELRQKKAQ 514 >UniRef50_C2BD73 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BD73_9FIRM Length = 1128 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 109/821 (13%), Positives = 247/821 (30%), Gaps = 92/821 (11%) Query: 61 TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS 120 + F +++I +E E + + L ++ I+ +E Sbjct: 350 SKSFKIKSINFETLDEEEQEKIILRYQEFLNSFTKEVEVYVTINNKKIYIDEFTKE---- 405 Query: 121 GEQAERFNAITRAYYMKAAATQFPLPE-GMNLPLTLRHYRVFISYCSPSKKKSRADILEM 179 + Y++ L + + R V +S + S K++ Sbjct: 406 ---ILLKDKNDNKDYLRKEYNDMLLDKISKGINSIQRERYVTLSLEADSYKEAIEKFNIY 462 Query: 180 ENLVKIIRASLQGA---SITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQ 236 +L+K ++ + + + + I+I+ ++N + + Sbjct: 463 TDLMKRSIKTIGSGDKNNSDLEVLTEEDRIEILFNLLNPEKG---KYLKYYNIEKMRKEG 519 Query: 237 CVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELS 296 + D++ + N + + ++ P + A L+ Sbjct: 520 LTVADI---ISPDFVDITPNYIKIN-DYYVSFYFISELPNLLNPSFFAGINEEFNEQILT 575 Query: 297 --ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQR 354 I P+ + + + A L+ ++ K S P +E +E L Sbjct: 576 TVIYNPYEQKEAVKLISSQYLNYNAELESLNKRSKLNNSLFIIPPKLEVAIEETKALLDD 635 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLP 414 + + + + + K + + + + L + +CLP Sbjct: 636 VTVRDQKLFKTNVVVGVYGK-TKVEMDKNASLLKDYCDRKMVNLTIAKNMQEYALNSCLP 694 Query: 415 FMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDI-FFR 473 + + S A MP N L P+G+ A D+ Sbjct: 695 IGQD--------MLPMKRSLTSEAGAVYMPFKTQNILDPSGMYYGVN---PANKDLILVN 743 Query: 474 GMNNTNYNMAVCGTSGAGKTGLIQP-LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 N N + G G GK+ + ++ ++L + ++ D + YK LC ++ G Y+ Sbjct: 744 RKKFKNGNGFILGKPGGGKSFAAKNEILNTILTTDDDVIIVDPENEYKDLCLSLNGEYIP 803 Query: 533 ---GETLRFNPFANITD----------IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQA 579 N F + I + + + +M L +L Sbjct: 804 IEQSSPYHMNLFDIEENDKEDGGLEGSIKEKVGFITGCIGLM--MERALTIEENAILDDC 861 Query: 580 VRASWLAKENR----------------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 + + + + + + L + E ++ +I Sbjct: 862 ITQIYKSWFKYVSEQKQNQQEVNYKYFPTLTTLREKLASLQGRE--------KNEAYSLI 913 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 L YT F+ ++ ++ V + GL + L M ++ + R+ Sbjct: 914 TALRMYTTGSL--NMFD-QLSNINPKNRLAVFSIRGLNNEGVLKKLAMNIIMDQLWQRLL 970 Query: 684 RTPR-NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKA 742 R + IDE L F N F+ ++ AR++ G ITQN+ D + Sbjct: 971 RNGKNGRPTWIYIDE--IYLLFDNANSMNFLRNLWKRARKYNGFPTGITQNVDDLLAIHD 1028 Query: 743 SSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQ 802 AR N+ + ++L QS+ + LY + I + F Sbjct: 1029 ---ARTMLSNADFVMMLTQSSIDKLGLANLY--NLGETLQTYITDSEPGHGLIHTEF--- 1080 Query: 803 VENHSSWHRLFVDP--LSRAMYSSDGPDFEFVQQKRKEGLS 841 + + +++ + +Q++++ + Sbjct: 1081 ---GTIPFENKFPKNTHMYEVMTTNPAEKAEIQRRKQNEID 1118 >UniRef50_B9D147 VirB4 n=1 Tax=Campylobacter rectus RM3267 RepID=B9D147_WOLRE Length = 834 Score = 262 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 103/801 (12%), Positives = 258/801 (32%), Gaps = 80/801 (9%) Query: 52 ESGLFMNDTTMGFMLEAIPINGAN---ESIVEAL--DHMLRTKLPRGIPLCIHLMS-SQL 105 E+ + D +E ++ A + + L M T L + + + + Q Sbjct: 81 ENIIITKDGNASIAVELKGVSYAGISLDDETDYLLNRVMFFTTLKDDVEINLIIKKIKQD 140 Query: 106 VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYC 165 + + + ++ E +++ Y ++ + + + L ++ Sbjct: 141 DKEYTDKNINPYA--NEIIKKWETNQDIYAIRYFLIISTMTKNITGLLESFKTKMTSEEG 198 Query: 166 SPSKK--KSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPK 223 S + K + I + + I+ + + I+ N +L Sbjct: 199 DESNESAKLKQKIELLNDTFSNIKNYFSIY--QPRQLSGDEIINFYATYSNAKETNL-AY 255 Query: 224 RRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNM 283 +L S ++ ++ + DY+ R +G AR ++ + Sbjct: 256 TNELITDSYISSY-------VEFKKDYIEF-YRNDGTTKYARFISVKA---------YET 298 Query: 284 ADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 S + + + + F+ + L ++ K + +VE Sbjct: 299 EQIKSIITSNLIKSNNEFMAMIYLKAYEKRKAIKKIKDTKAF--------------AVEL 344 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF 403 +E +L + + + + ++V ++ D+ + ++ N G ++ Sbjct: 345 VRQELDQLMELIQADRENLVETSFSVYCLA-DSLKELENRSNELKNILENQGLNVVRETL 403 Query: 404 NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRN 463 N + + P K+ + +F + ++ A Sbjct: 404 NQKALYFSFFPSRGNLNARKKTLNISNLATIANFEN-EVTGFNQNDWGGEAITTFKHLNG 462 Query: 464 QLAFIDIFFRGMN-NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSL 522 + ++ + + G +G+GKT L Q L+ ++ D G + Sbjct: 463 TPFLFNFHWQPDGDRPAGHTMIVGGTGSGKTTLAQFLMTNLFKYPIDIFAMDKLRGMYNF 522 Query: 523 CENMGGVYLDGETLRF--NPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGL--LLQ 578 + G Y D E+ F NPF+ + D +++ + ++ L MA ++ HE + + Sbjct: 523 TNYVDGEYHDSESDGFKLNPFS-LADTNENRDFLKSWLRFMAEVK---NDEHEAINDINN 578 Query: 579 AVRASWLAK--ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYG 636 + + K + D + L + ++ + + + D Y G Sbjct: 579 TIDRIYDMKQDGQTLTLSDFIISLPSDNNEKS------------RLKIRFDNYK-----G 621 Query: 637 QYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 F++ E +L ++ VL + G+ + ++N+ + ID Sbjct: 622 SIFDNKEDALNFTKQLSVLNMDGILQNKKTAGLTAIYIFHKLKNKAKNSADKRGFFCFID 681 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E L ++ + E I + R+ G Q++ F++ + + N + Sbjct: 682 ELKDYL--QDETMQEKILEAILEWRKIGGVACMGFQSMSLFNNIER---GSSFLDNMANF 736 Query: 757 IILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP 816 II +++E P + + + + Q + L+ E+ L Sbjct: 737 IIFPTNSEETLAELNA-MIGLTPTEAKFLKETNSNARQILLNMKLRNESAKLDIDLSRLG 795 Query: 817 LSRAMYSSDGPDFEFVQQKRK 837 ++SS + ++Q + Sbjct: 796 SYLRVFSSSSDNVMLLKQLKN 816 >UniRef50_Q3C0C2 Type IV secretion system protein VirB4 n=9 Tax=root RepID=Q3C0C2_XANC5 Length = 877 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 127/931 (13%), Positives = 263/931 (28%), Gaps = 154/931 (16%) Query: 23 DESAKANEVLGEMSFPQFSRLLPY-RDYNQESGLFMNDTTMGFM-LEAIPINGANESIVE 80 E A A+ S ++PY Y+ ES + +D + + L+ + ++ Sbjct: 8 PEGAAADAKEMA-----LSDMIPYTVHYDDESVITKDDGLVQVIKLDGLYFESLTAEQIK 62 Query: 81 AL----DHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 + +LR+ + +HL+ ++ G F+ QA R R++Y+ Sbjct: 63 QFERRRNTVLRSIANSDRGVYVHLIRRKVNLYPAGEGGTWFARRFNQAWRERYNKRSFYV 122 Query: 137 KAAATQFPLPEGM-NLPLTLRHYRVFIS---YCSPSKKKSRADILEMENLVKIIRASLQG 192 P L +S + ++ ++ +L G Sbjct: 123 NEIYISIVRNRFRQGAPGILDRAFSLLSGSKVTKEDLESFEEQAKDVNEAANLVVQTLSG 182 Query: 193 ASITTQTV---------------------------------------------------D 201 + D Sbjct: 183 YGARKLRIQRRPEFVLDRVSRADAQLAVERFKMSWQEFQRSHGHHDVYRRDEVLDYLGED 242 Query: 202 AQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRN 261 + ++N + + QLD S D K+ ++ + + R Sbjct: 243 FTEIGGFLHYLVNLEDERVPVTEMQLD------RTLAVSSLDFKMLSNMMAVQNLSGTRA 296 Query: 262 STARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANL 321 + AR P +L+ L +I+T + D++ + Sbjct: 297 GAMLSMAEWPARTPSR------------MLDEFLKQPVEYIITQSFFFTDRISAEHDMRQ 344 Query: 322 KYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE--- 378 + + + A E++ E + Q L G+S + L + + Sbjct: 345 ERRRIAVNDREGVA------EEDKDEITKGLQDLTRGRSVNGLHHLTMLVHVPATTQFAD 398 Query: 379 ----------TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 + +F G + + F F LP A + ++ K Sbjct: 399 PIENKRQTIADLDGAVGLLKKAFVNLGVKPVREWFAVETFFWAQLPGQAQHFMGRRGK-- 456 Query: 429 GVVQRAESFNVANLMPLVA-------DNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYN 481 +S N A L N PA + T + + + Sbjct: 457 -----IKSGNFAGFASLHNFAVGKIDGNLWGPAIMPFETESGTAYYFNFHREMEGMVAGH 511 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRF 538 +A+ +G GKT L+ I + FD +G K MGG + + Sbjct: 512 LALTADTGGGKTTLLAAFIAMADKARPRVFWFDNREGAKVFMRAMGGQHTTLTVQGNTGW 571 Query: 539 NPFANITDIDQSAERVRDQLSVMAS-PNGNLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 NP + D ++ + + L++M + G L +AV ++ R+ +V Sbjct: 572 NPMK-LPDTPENRAYLVELLTLMRTCYGGKLVPDDIDRFKKAVHENYALAYPDRRLRNVA 630 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLE 656 +M V G F++ ++ + E Sbjct: 631 WCF-------------GQGELAKDMRVWHGANGIEGANWGVFDNAHDNIDLTKCRHYCYE 677 Query: 657 LGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + L S + ++ Y +R+ ++ + V++EG L+ E I+ Sbjct: 678 MRQLIKDGSAR-PELPVVLSYPFHRIEQSMNGEPFILVLEEGQNLVKHA--YWREKIDSY 734 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 RR G + +T + + S ++ KI L + Sbjct: 735 IMQIRRKNGLLVFVTPDAKYLYCETDS-----IQKQTATKIYLPNGEANRTDLVDVL--G 787 Query: 777 FLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD--PLSRAMYSSDGPDFEFVQQ 834 P + + + FL++ N S + + P + SS+ + + Sbjct: 788 LTPGEYEFVRDTPPENRT----FLIRRGNESIKAKFDLSDMPAFIPVLSSNDKGVALMDE 843 Query: 835 KRK--EGLSIHEAVWQLAWKKSGPEMASLEA 863 + E + V + +L+ Sbjct: 844 IIRELETDDPEQWVPVFMERALAKNTHNLKQ 874 >UniRef50_D2B290 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B290_STRRD Length = 830 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 97/751 (12%), Positives = 222/751 (29%), Gaps = 68/751 (9%) Query: 107 GDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCS 166 D +E R W+ + + + ++ R +V Sbjct: 96 RDYLEEMYR-HVWAKDFWSKEVYLGVRLGLRGRQLGTG-VLSQLFGFYQRSEKV---LGL 150 Query: 167 PSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQ 226 +A+I + + + +L +++ + + + + P Sbjct: 151 EDDHVPKAEIAKWSEQAERLGRALSASALYARHATSTEIAWLFQHAATGSLGDPPPSAS- 209 Query: 227 LDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADN 286 P +E + ++ L + + + + AR P++ + Sbjct: 210 --PKRRWGQGEIESLVEGQIHNGRSLLRIEQ--PQGDSYVAYLSFARFPDLMPFPDGEP- 264 Query: 287 YSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLK---YMDLEKKSKTSYAKWFPSVEK 343 ++ + P ++ + + VK + K D++ + + A+ ++ + Sbjct: 265 ---WMHFADQLPFPVEISSRMRLISPVKASKDVARKLAHARDMDIHIREAGAEAPLALAE 321 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF 403 + L + + V + + E ++ + ++ +R G ++++ Sbjct: 322 QIDAARMLEHGITKERLPFVYGWHRLIVSAP-TEEICVQRVEAVVEHYRDMGIDIVNSTG 380 Query: 404 NHMRNFLTCLPF----MAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP 459 + F LP + + L+ + ++ + + P Sbjct: 381 DQFSLFCEALPGERVRVNAYAQRQPLRTIAGGMATATVDLGDRADEGNAGWMGPYVGETL 440 Query: 460 TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGY 519 + D N +A+ G G GKT L +I + G V D Sbjct: 441 GRARSIVHFDPLVAATRNRPTAIAITGEPGGGKTTLALLMIYQMALRGVTVAVIDPKGDA 500 Query: 520 KSLCENM-----GGVYLDGE---TLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEV 571 SL + + + +PF+ DI + L ++ + E Sbjct: 501 DSLVQLLQRRGRKARVIPLGSAAPGLLDPFSFGDDIAAKKTMASETLRLLL---PRMSEE 557 Query: 572 HEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 E ++QAV A + + VVDFL+ D+ +RS + + L + Sbjct: 558 RESAMIQAVAAV--SNGEDPSLGKVVDFLEQTEDAASKNLGAVLRSMSEMHLARLCFDPS 615 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGL-----------EDRPSLLVAVMFSLIIYIEN 680 G + + V LGGL L + L+ Sbjct: 616 GG----------DQIDTEGWTTVFTLGGLTLPDASTGRDDYSYEQRLSVALLYLVAQFAR 665 Query: 681 -RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS 739 M R K +DE W + + + + + R R A + ++QN D + Sbjct: 666 GLMNGLDRRTPKAIFLDEAWAI--TSTPEGAKLVPEVSRMGRSRNTALVLVSQNAGDLLN 723 Query: 740 DKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSF 799 ++ ++ + + S E L + + ++ G + F Sbjct: 724 EQVTNCLSSVFAFRST------ERVEVEHVMALLGVEPSEEHKAILRSLGNG-ECVFRDL 776 Query: 800 LLQVENHSSWHRLFVDPLSRAMYSSDGPDFE 830 + L D L R + ++ D Sbjct: 777 DGRAGRIG--VDLISDELVRWLDTNPTHDKP 805 >UniRef50_B7U591 Putative uncharacterized protein n=5 Tax=Bacillales RepID=B7U591_BACSU Length = 655 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 87/648 (13%), Positives = 204/648 (31%), Gaps = 81/648 (12%) Query: 238 VEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSI 297 S ++ + ++ P ++ + Sbjct: 22 YNPSLLSLIQPQGGVSFHENYIKKGDGYEAIIYIYDYPGNVDVFWLESI-------LNLS 74 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT-SYAKWFPSVEKEAKEWGELRQRLG 356 + I T+ + E++ K ++ N M+ ++ + A ++ + Sbjct: 75 NINAITTVDVSTEERSKAITQVNKGIMEQNDRAHSEKNATSRIDAANTFHTLKDIYNEIS 134 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 + + I+ + + + +L + NGF + + + Sbjct: 135 QQGEVLKLMQIRISV-SGRTIKETEDNLKAVLENLEGNGFHMTVLLNEQEYEWNSLF--- 190 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGM 475 + ++L + + +A +P P G T + D+F Sbjct: 191 SSYSSQQKLPNKRAGKALPAATLAASLPFNFSKLDDPNGSYLGTTTTGGIVLFDLFHLSK 250 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DG 533 YN + GT GAGK+ ++ + + G + FD+ +K L + GG Y+ DG Sbjct: 251 TRNYYNGVIVGTMGAGKSTALKKIGLDNILRGNYIRGFDVTGEFKPLIDLFGGRYISLDG 310 Query: 534 ETLRFNPFANITDI-DQSAERVRDQLSVMASPNGNLDEVHEGLL-----------LQAVR 581 + N + D + ++ +++ ++ ++ + ++ Sbjct: 311 SSGIINALQVLKTSADPDLTFLENEQQSFMKHLSKMNDFYKFIVPSATDQDLQEFSRMLK 370 Query: 582 ASWLAKE---------------NRARIDDVVDFLKN------ASDSEQYAESPTIRSRLD 620 + D ++F++ + SPT RL+ Sbjct: 371 KLYNKFGLTPDMKEGITQLSNDRYPIFSDFLEFVREELYEDFEKKLFREEISPTRTKRLE 430 Query: 621 EMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLIIYI 678 ++ + L+ + YG+ FN ++V + L + A MF+ + I Sbjct: 431 DIELTLESIVED--YGRLFNGHSSIDDITNEQIVFFSIRSLVGMTKKVFNAQMFNALTLI 488 Query: 679 ENRM--------------------YRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR 718 + M + + + L +IDE RL++ N +F R Sbjct: 489 WDNMIQVGKPQYDGLYEDNGLTMEEKMKKIKRMLVIIDESHRLINANNELAVDFTTDFAR 548 Query: 719 TARRHTGAYITITQNIVDFDSDKASS----AARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 AR++ G + +Q+I DF + + + + + + YK I+KQ + ++ Sbjct: 549 EARKYFGGLLFASQSIRDFVPEGSKADVVGKIKTLFELTQYKFIMKQDSNTQKDLKNIFQ 608 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 Q + I + L ++ + V P ++ Sbjct: 609 GQLSESELSRIPTLEKGQ-----CILAITGQNNISMNIDVSPEELQLF 651 >UniRef50_Q21QJ8 Type IV secretory pathway VirB4 components-like n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21QJ8_RHOFD Length = 831 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 120/878 (13%), Positives = 249/878 (28%), Gaps = 128/878 (14%) Query: 40 FSRLLPYRDYNQESGLFMNDTTMGFMLE--AIPINGANESI----VEALDHMLRTKLPRG 93 F LLPY E + D M + E + G +E+ V A + Sbjct: 18 FQELLPYMCLWDEQTVATLDQGMLALYEYDGLDAEGRSEAETSLAVNAFEQAFSGFGSGS 77 Query: 94 IPLCIH------LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPE 147 D + + + + ++ + A + Sbjct: 78 TVWSYVDRRKTDAYPRGHFSDNVARFIDQTWQDKVTSTQYENKYSLAVHQRA-NVGTMAL 136 Query: 148 GMNLPLTLRH------------YRVFISYCSP---SKKKSRADILEMENLVKIIRASLQG 192 + L ++ + +S + ++K +A +E+ + + + ++ Sbjct: 137 FDTVDLLVKEEGLGLTAAFGKAIKTQLSLKARRSVDERKMQAAKTALEDKLLSLESGMRN 196 Query: 193 ASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLT 252 + + + + + + ++ S P N C + L+ D L Sbjct: 197 LGL--RRLGEERLMAELYNRVSPASPSRTAYPVPTIPSFLSNMLCSD---SLRRTPDALV 251 Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + + L A+ + L+ +I + D+ Sbjct: 252 FTNEKE-----KYVGVVSLKGF------SGNAETVVSQLDWLTTIEGEITVAHCFRFIDR 300 Query: 313 VKTHSEANLKYMDLEKKSKTSYAKWFPSVEK------------EAKEWGELRQRLGSGQS 360 KS + + + + K A + L Sbjct: 301 DVAQKTIEDIERYNISKSVPFFHRMYTTFAKTEPTKFNEGRLAMALDAKAALVDLYQANR 360 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 + + L + F D E V Q ++ + + + F R + + F LP G Sbjct: 361 AFGHHNLTVLCF-GDTYEEMKRVRQQVVENLKFSRFNGHVERMHQLTAFTQTLPGQWGAS 419 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPL--------------TPAGLLAPTYRNQLA 466 + G N A++ P+ PA PT A Sbjct: 420 VRWNFVSFG--------NAADIAPIRTLTKGPEKCVHFEKEIKREFPALTSIPTTAGTPA 471 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDMGDGYKSLCEN 525 FID++ RG+ ++ V G + AGK+ L+ +V D + Sbjct: 472 FIDLWERGV----GHLKVIGPTRAGKSTATNFLLSQFRKYEPCRTIVIDKNYSCRIATLL 527 Query: 526 MGGVYLDGETLRFN-----PFANITDIDQSAERVRDQLSVMASPNGNL--DEVHEGLLLQ 578 GV++D N P + + V + ++ S + + Q Sbjct: 528 QDGVHVDLNQSAKNGTRMAPLSLLGHERHHGFLVNWVIELIESGRNGVMCSPAEIDRITQ 587 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 ++R R+ + L ++ L ++ A G G + Sbjct: 588 SIRGLAELGRKHWRLHYLATSL------------------GPDLGAYLGRWIAGGADGNW 629 Query: 639 FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 F+++ + + + E L + M L IE + + + I+E Sbjct: 630 FDNEPEEVEI-GRHICFECQDLFGNKVVAGLAMSYLFYLIEGLL----DDSPTIVSIEET 684 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W LD N K + I+ RT + G+ +TQ + + S + N I Sbjct: 685 WFFLD--NEKFAKKIDDFLRTLGKRNGSLWIVTQTMKEIQEC---SIKTSIMSNIPNTIY 739 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 L + ++LY + L ++ A + + L+ + S L + Sbjct: 740 LP--DQNIMNSSELYIEAAGLLPEEIQRIAEATDKKHY---YLKTPSISRMLDLELPEEI 794 Query: 819 RAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGP 856 S+ + + + EA Sbjct: 795 VVCISAGSRA----RHTFDKHYATREANAGWKQSYFEE 828 >UniRef50_B9BFI8 VirB4 protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFI8_9BURK Length = 838 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 119/842 (14%), Positives = 255/842 (30%), Gaps = 116/842 (13%) Query: 56 FMNDTTM----GFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVG---D 108 + ND T+ G ++ I + G + +++ D + RG + ++ VG Sbjct: 42 YYNDHTLNTIDGAKIQVIRLTGLSAEMLDD-DGV--NWYKRGRNEALRAIADSSVGIYVH 98 Query: 109 RIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY--------RV 160 I + ++ + + + + E + RHY RV Sbjct: 99 DIRRKQALWPAGEYRSWFPRVLNDRFKERYERSPLYHHEIYISVVRYRHYTGSAGLVERV 158 Query: 161 FISYCSPSK----KKSRADILEMENLVKIIRASLQGASITTQTVDAQA--------FIDI 208 F + ++ + ++E+ VK + SL A + A Sbjct: 159 FGALDPSGGLSRMEREERQVRDLEDKVKSLMTSL--AHYAPVRLGAVESPEGKFCELARF 216 Query: 209 VGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILN 268 + ++ + D ++ ++ K+ + + G N Sbjct: 217 LRYLVTLEDGPVRA--GAYDLAQAISTAYIQCGRSAKLGKGVIEV----KGLNHWRVGQV 270 Query: 269 FHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEK 328 +++ P A + + + I+T D++ + +A+ L K Sbjct: 271 LAMSQWP--------AGSIPGMSDAFHRADAELIVTQKFFPIDKLDANLQASTYERRLGK 322 Query: 329 KSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK----------DNNE 378 ++A + ++ +R + +S ++ +++ + Sbjct: 323 ---------TEDTAEQALQIKKVLKRQAANRSITGTHHMSVLVHVPIDPTARDPEGEALI 373 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 + + F+ G I R F + +P + + G V + E+ Sbjct: 374 ELDDAVSRVGEVFKGWGVPPIVETTGMERAFWSQVPGASKRHN-------GRVGKIETLQ 426 Query: 439 VANLMPLVADNPLTPAGLL-------APTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAG 491 A+ + GLL PT + + ++ V +G G Sbjct: 427 FADFASMHGYPQGRFKGLLWGECLHIFPTQGGTVYCFNFHESRPGMVPGHLNVVAKTGVG 486 Query: 492 KTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD-GETLRF-NPFANITDIDQ 549 KT L+ L+ + +D D E MGG ++ G NP D Sbjct: 487 KTTLVSVLVSQADKVQPRVLWYDRYDAATVFFEAMGGKHIVLGSDQSLGNPCKM-DDTPA 545 Query: 550 SAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQ 608 + +RD + +MA G + + +AV ++ + + + + Sbjct: 546 NRAMLRDLIRMMAECYGYKVTTDDYAKIQKAVEDNFDDTKTPFKDRRLRHMMWQFGRGSG 605 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE-PSLRDDA-KMVVLELGGLEDRPSL 666 + L + +G G F+ DE +L + + + +E+ + Sbjct: 606 -------------LYEALKIWVEDGANGAVFDGDEDDTLDLQSCRHIRVEMKHVMKDKEA 652 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 + Y+ +R +T + V DE L+ + IE T RR Sbjct: 653 R-PELEVYTGYLTHRFEQTLDGRPTIVVWDEAQILVRTQ--FWQHKIETYRETFRRRNCV 709 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIG 786 + IT + A + Y I L Y + + Sbjct: 710 TVFITPDPKALYCPV-----EAVMKQAVYTIYLANDQATPKDYIENLYFSRSEFEF---- 760 Query: 787 KFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM---YSSDGPDFEFVQQKRKE-GLSI 842 A+ + L++ + S F P + SS+ E +++ + E G S Sbjct: 761 -VRDAQPAEYK-MLIKPGSGPSVRASFAMPDMADLIPVLSSNDKAVELMERVKAELGTSD 818 Query: 843 HE 844 E Sbjct: 819 PE 820 >UniRef50_B1F9A5 Component of type IV transporter system n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1F9A5_9BURK Length = 801 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 102/806 (12%), Positives = 236/806 (29%), Gaps = 107/806 (13%) Query: 95 PLCIHLMSSQLVGDRIEYGLREFS----WSGEQAERFNAITRAYYMKAAATQFPLP--EG 148 + +S + R + R+ + G + ++ R +F P + Sbjct: 45 GVPFESVSRGEIEARYDSWNRQLAAMTLEKGNRLSLWSTFRRRRVSFGDEYRFYNPFIQQ 104 Query: 149 MNLPLTLRHYRV------FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA 202 R + F + E+E L + + SL Sbjct: 105 AVDKYLQRFRKHHHYENSFYISAILQGDDLDESVRELEELGESLTKSLIAYDPQPL---- 160 Query: 203 QAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNY---QCVEDSFDLKVRADYLTLGLRENG 259 + G + + + +D + + + + L D + + + Sbjct: 161 -ETYEHNGILFSEPYQFIGELVNGIDERVPVTQATGRDLIPTSHLHFHYDTVEIRTDRST 219 Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 R ++ L P + NP L++ F T + Sbjct: 220 RFASCY----DLKDFPAAGW---------GQTNPLLTLPVEFTFTQSFGCLSTADAMDAI 266 Query: 320 NLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 + +LE + +E + + + Y + + D E+ Sbjct: 267 QAQINNLES--------VEDKATHQIQELKDALALIAGRDLAFGDYHGALIVY-GDTAES 317 Query: 380 ALEVEQDIL-NSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 A+ + + GF+ + + +++ +P K + N Sbjct: 318 AISNGAYVTSRALNDCGFKFVKATASAPYTYMSQVPG---------FKTKPRPMPKSTRN 368 Query: 439 VANLMPLVADNPLTPAGLLAP---------TYRNQLAFIDIFFRGMNNTN------YNMA 483 +A+ + + G T L ++ ++ + + Sbjct: 369 LASSFSMHTYSAGKARGNPLGDGSALMPVQTIAKSLFSLNCHASRLDENSVGEKVAGHTL 428 Query: 484 VCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNP 540 + G++G GKT L L+ + D+ G + E +G +Y +GE P Sbjct: 429 ILGSTGTGKTTLETMLLAFLERFDPKIFALDLDQGLRIFLEEIGAIYYTLREGEPTGLAP 488 Query: 541 FANITDIDQSAERVRDQLSVMASP-NGNLDEVHEGLLLQAVRASW-LAKENRARIDDVVD 598 + D ++ + D + +G L + + AV L +++ Sbjct: 489 L-GLPDTKRNRAHLYDLVGACCRDEDGKLSADDQRQIKHAVDTVMSLENIEHKTFSRLME 547 Query: 599 FLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA--NGTYGQYFNSDEPSLRD--DAKMVV 654 + + + + + + L Q+ NG + +++ +L + D + + Sbjct: 548 SIPDTGEE-------------NSLWLRLSQWCHATNGRFAWALDNEPSALTNIADVRRIG 594 Query: 655 LELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIE 714 ++ + + + ++Y++ +M R + VI E W L E I Sbjct: 595 FDVTDFLKKGYAATEPVLAHLLYLKEQMQR--KGGLLATVIAEFW--LPASYPTTQELIR 650 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYP 774 K +T R+ I +Q+ D + R ++ KI L Y L Sbjct: 651 KSLKTGRKADEFLILDSQSPEDAIQCPVFAEIRDL---TATKIYLPNPDATPDGYKLL-- 705 Query: 775 DQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMYSSDGPDFEFV 832 + + FL++ N S++ L + + A+ SS + Sbjct: 706 -NLTDREFRTLKALSKESRT----FLIKQSNQSAFATLDLAGMNDEIAVLSSSLDNVAIW 760 Query: 833 QQK-RKEGLSIHEAVWQLAWKKSGPE 857 ++ R + ++ G Sbjct: 761 EECTRDAHGDTDLRMQLFQARRKGKR 786 >UniRef50_C6J2V9 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2V9_9BACL Length = 661 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 97/618 (15%), Positives = 200/618 (32%), Gaps = 65/618 (10%) Query: 260 RNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEA 319 T +F EI+ A +L+ + L + + + E Sbjct: 62 ITPTRYFRSF----YAEISSGNTWAGMLDSLIRGDHG-KGDVDLAIHVQPSSNDRELDEI 116 Query: 320 NLKYM-DLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNE 378 + L + + ++ E + E ++R+ + + + + Sbjct: 117 GRRIAGLLSDLADEKDVRKVDAMRDEIADLKERQKRIRLNVERSFRVSIQVIVSAPE-WK 175 Query: 379 TALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFN 438 +++ + ++ F L S + + LP + + K+ V ES N Sbjct: 176 ELMKLCRSLVQRFAGKSIYLRSADGQQLAALQSVLPTVKASAVQKE-----HVLSLESSN 230 Query: 439 VANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 VA+L P + +G++ + ++D + NYNM + G SGAGKT + Sbjct: 231 VADLFPWGGGSLNHRSGVVIGKDRMGRPVWLDNWH--PELANYNMCIIGRSGAGKTFVTL 288 Query: 498 PLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDG---ETLRFNPFAN----------I 544 + G + D Y +G +++ R NP+ Sbjct: 289 LITHRSSHIGRQIGIIDWKGEYGDFLRALGCPFIELHEHSKHRINPYDVDITELADGTRF 348 Query: 545 TDIDQSAERVRDQLSVMASPNGN--LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKN 602 DI+++A V+ + M S L + + +A+R + E + + + Sbjct: 349 VDIEEAANSVQALVFKMISVYDRSVLTGEVKVFIGRAIRQQYAEYEITTDPESLYTTDQT 408 Query: 603 ASDSEQYAESPTIR-----------------SRLDEMIVLLDQYTANGTYG--QYFNSDE 643 + + + + LL +T G F+ Sbjct: 409 MQGQGIFRTGKVRKAMPELIGLWEKMNAHKSEAIRKASELLQPFTRKGEMSSYSIFDGQS 468 Query: 644 PSLRDDAKMVVLELGGLEDRPSLLVAVMFSLI-IYIENRMYRTPRNLKKLNVIDEGWRLL 702 A + + L P ++ + + ++ R + +KKL +I+E + Sbjct: 469 TIELKSAPIFGFAINRL--DPEIMRPIGLFVTERWMMERWAKKHPEVKKLLIIEECQNIF 526 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 ++ + E +R R + +TQ + F S A AA NS KII Q Sbjct: 527 LDEDFGAV-WAESAFREGRATNTGIVPVTQGLEVFT---RSQAGMAAIKNSPIKIIGIQE 582 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 A + + D + L++V+N S + P ++ Sbjct: 583 ALDIDAVRGKL--ALTEGEADFL-----VYQARKGDMLVKVDNQSVIVHVDASPYEHMLF 635 Query: 823 SSDGPD--FEFVQQKRKE 838 ++D D + ++ KE Sbjct: 636 TTDPNDPLYAERKRYIKE 653 >UniRef50_D2S2X7 Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S2X7_9EURY Length = 893 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 108/766 (14%), Positives = 236/766 (30%), Gaps = 105/766 (13%) Query: 181 NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED 240 A ++ + + + + E+ + Q D L + + Sbjct: 25 ETFDRAAAIVEANGDDLTKENIREQAEHLLELEEVDEGEFRLGVVQDDTEQSLADRDIIA 84 Query: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 LK +++ G + + + PE L L+ + + Sbjct: 85 PRKLKEVSNFFESGYM---IRNDKFVRTLTIHGYPERVPL--------GWLDELYTTNDH 133 Query: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQ---RLGS 357 +T + D + + L + + K +E + +++ + Sbjct: 134 VRVTQHIQPRDTGSVLRKLQKRLTQLRARLHKKHEKSQTDTHEEEADRDMVQELIWDIIL 193 Query: 358 GQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMA 417 G++ + + + I D+ + E + +++S E + + + P Sbjct: 194 GETKLFDFAIYIEVVA-DSEQELNEATERVVDSLSTANAEAVPLEKRQVESQDALSPLGD 252 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMN 476 Q + + + P + P G+ N +D + Sbjct: 253 D--------SIKSTQLMQETAIGTMFPFIEPVITDPEGIFYGFDTTNTPVILDRY----E 300 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFA--VVFDMGDGYKSLCENMGGVYLD-G 533 ++Y+ A+ GT G+GKT + + L +V D + ++GG + G Sbjct: 301 LSSYSKAIAGTMGSGKTFAEKHEMYHRLMMDPEIEMLVLDPLGDFVDFANDLGGQVIRFG 360 Query: 534 ETLRFNPFANITDIDQSAER--------VRDQLSVMASPNG--NLDEVHEGLLLQAVRAS 583 NP ID + + V + + S +L + EG+L +AVR + Sbjct: 361 GDNTVNPLEIQRGIDDAVDDPFKKKLRSVMELFRIHFSAVAEQSLSKEQEGILRRAVRLA 420 Query: 584 WLAKENR----------ARIDDVVDFLKNASDSEQYAESPTIRSRLDE------------ 621 +L I D++D L +D +E + ++ Sbjct: 421 YLQYGITEETATHENTSPTIKDLLDILAEIADGGLPSEFLELHGDANDERVWPEIDQLET 480 Query: 622 ------------MIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA 669 +++ L+ + G + ++ D ++VV+++ D Sbjct: 481 RFRDGDEQYAYQLLLGLEAFQKGGENDNL--TGRTNVELDNRLVVIDMSMFSDTGQ-APL 537 Query: 670 VMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYIT 729 M + +I R + + + IDE LL + I+ R +R A Sbjct: 538 FMHVMFDWIYQRAA-SDHDRRTQVTIDEAHYLLRR--EATTDMIDLFIRHSRHFNTAITL 594 Query: 730 ITQNIVDFD------SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 I+Q + +F S +A+ AR + K I + + P ++ Sbjct: 595 ISQTVDEFVAQSDDQSKEAAEKARNVYNLCDIKQIFHHESVSDEMID---FHDLTPSEQT 651 Query: 784 MIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGP------DFEFVQQ--- 834 + +D +S FLL+V S L V+ ++ D + ++ Sbjct: 652 FLTTAQTGEDGGYSEFLLEVNEWSKPLALHVNDYEVSVLDDDLDPWEYLAENRYIDADDA 711 Query: 835 --KRKEG----LSIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSV 874 EG I E+V + + + + E+ Sbjct: 712 GFLAAEGRLDEYEIPESVLEKVDLNEIDKEPETDEAVVENADRERA 757 >UniRef50_A4ITY7 TrsE n=7 Tax=Bacillaceae RepID=A4ITY7_GEOTN Length = 617 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 83/604 (13%), Positives = 178/604 (29%), Gaps = 57/604 (9%) Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 + D + R+ T + I + +S + Sbjct: 31 LSPDSIE-EKESYVRSGTNYTRTLVVVEYSSI--------IVQEYVQRLNDLSDNISVIQ 81 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSY--AKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 + D + + +K + Y + + L +L + Sbjct: 82 YITEYDSSEVRRHLSESIKQNSQKLYSKYVNDAGKAEAQAQIDSARMLLHQLSFKNEKMF 141 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + + I N + + Q + L P F + LP K Sbjct: 142 MFQMLIHIVA-SNLKELDALTQQVKAIVGPFAKTLA-PTTRMKDAFDSFLPIG------K 193 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYN 481 + + V+ P + G++ + +D N + Sbjct: 194 NKVYDLTYRPMNAEAVSYFFPFHENEIFDEKGIIKGRNMTTGNVVIVD----DDLLLNRH 249 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRF 538 V G SG+GK+ I + G +V D + + +GG ++ Sbjct: 250 EFVIGISGSGKSTYIFQDMMRKYMLGRRIIVIDPKGEFGEIFRTLGGEWVKISLKGGNII 309 Query: 539 NPFANITDIDQSAE------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENR-- 590 NPF + + E ++ L++ + ++ E +L + + + Sbjct: 310 NPFDIPKNQHGTEEGNPLIAKISTLLTMFRLMYPQMTDLQEDVLSKLLIELYAKFGITEE 369 Query: 591 -----------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYF 639 ++D FL+ ++ +P + + L Y G + + F Sbjct: 370 TDVNALTLTDVPIMEDFYHFLEEIKET-----TPEEYEHVRDFHTTLHAYAK-GMFAKVF 423 Query: 640 NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGW 699 N ++ +V ++ L++R V F+L+ +I + R+ IDE Sbjct: 424 NGH-TNVDVSNPLVAYDIFDLQNREKAQRVVYFNLLSHINYDILNGDRH-PTQVYIDEAH 481 Query: 700 RLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS--DKASSAARAAWGNSSYKI 757 + D K E++ + R TQ+I DF S D + A + ++ Sbjct: 482 IIADPKVPLAMEYVYFMMKVLRSFNCGVTPATQSIKDFLSAKDDKRNYGEAVISQAIQRL 541 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL 817 L E + QF +R + KD+ + V + + + + Sbjct: 542 YLPMQEVEINFLEKELGHQFSEEERTTLTVVEGRKDEQAGKGIYFVGSKKIKLEVQLTDV 601 Query: 818 SRAM 821 + + Sbjct: 602 EKQL 605 >UniRef50_Q97HG4 Conjugative transfer gene TrsE homolog, ATPase n=1 Tax=Clostridium acetobutylicum RepID=Q97HG4_CLOAB Length = 617 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 82/595 (13%), Positives = 176/595 (29%), Gaps = 69/595 (11%) Query: 246 VRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTL 305 + D + G + + P + + + + +T Sbjct: 29 ITPDGIVEGKDYIYLGPGRYARVYAIIGFPRNMTIGYLNELFQM---------GDIDITT 79 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFP---SVEKEAKEWGELRQRLGSGQSSV 362 + + KY + ++ A++ E R ++ + + Sbjct: 80 YVENIPDSAVIRKLTGKYSQYMSNINLQLKHGYSMDYGMKLAAEDLDETRAQIQTNTERM 139 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 I N + + + + ++ FLT +P Sbjct: 140 FYVQ-PIVVLWGKNLSALDDKAEMFDTICARKSLISKCLVGDQLKGFLTGVP-------N 191 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNY 480 ++ + + +VA L+P+ G+ + F TN Sbjct: 192 LNIEYTSGFRNMITGSVACLIPVGNTELCHKNGIFYGENMFTKSPIVYNEFIGAPTLTNP 251 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETL---R 537 + V GT+GAGK+ ++ +G + V+ D + Y+ L E +GG Y+ Sbjct: 252 HTFVSGTTGAGKSVFLKLKAARSAAAGRWTVILDPQEEYQPLIEKLGGQYIQLRPGVKSG 311 Query: 538 FNPFANIT----------DIDQSAERVRDQLSVMASPNGN---LDEVHEGLLLQAVRASW 584 NPF DI + + +S+ + N L + + + Sbjct: 312 INPFEIEVEEDENEKKKIDIYGKRSEIIEMISIFSEKFRNGNPLQGEEITAVDECTAQLY 371 Query: 585 LAKENRARIDDVVDF--------------------LKNASDSEQYAESPTIRSRLDEMIV 624 + + L + ++ + E+I Sbjct: 372 ENLGITEDPKSLYEEKTYEKEGKFYTGNIKKDLPTLSDLRNALIEKNKEIKSDGVKELIE 431 Query: 625 LLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYR 684 ++ T +G + + ++ D+K++ + L + M + + +I Sbjct: 432 VMKMITGDGPMAMFDC--KSTISFDSKIIAISYKHL-NDEFTKFYAMINSLSWIWTTFSN 488 Query: 685 TP-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS 743 ++++K ++DEG F + F+E R R+ A TQ + DF S Sbjct: 489 YKYKDIEKEVIVDEGHLFAKF--ERSLHFLELIARLGRKLKIALTLATQFMQDFI---GS 543 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSS 798 A KI+LKQ A K + ++ F + + S Sbjct: 544 KQTEAIIHLCGTKILLKQEASVAKKVCEFL--GLSSRCEQLMTTFISGQAILLSE 596 >UniRef50_C4G4W2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4W2_ABIDE Length = 605 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 95/589 (16%), Positives = 207/589 (35%), Gaps = 65/589 (11%) Query: 240 DSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC 299 ++K++ D L LG F + P+ A L+ +I Sbjct: 12 APMNVKIKKDSLILGENNA--------QCFGVISYPQSAKY--------GWLSEITNIPG 55 Query: 300 PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW-GELRQRLGSG 358 + +++ + + N +++ + + ++A++ +L +R+ G Sbjct: 56 -TVASISFETVNSGEFLEHLNKNISVYASEARDAKNELERLRAEQAEKSGKQLLKRIDIG 114 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 V I + DN ET ++ + ++ + F + F P Sbjct: 115 GEQVGLVSTAIMSVAGDN-ETIGKISRRQKSAASLIKCKERLLSFRQLDAFSQISPTSGK 173 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR-NQLAFIDIFFRGMNN 477 + + + +V P G L +D + R + Sbjct: 174 NKNISSMID----RVMPLSSVVYGFPHSHGGYTDDDGYYLGMDGAGGLVILDTWKRSGDR 229 Query: 478 TNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GET 535 TN NM V G +G GK+ ++ +I + G ++ D YK +C+ GG +++ G Sbjct: 230 TNSNMVVLGINGTGKSTAVKHIILNEFMLGKRIIIIDPEREYKDMCKACGGDWINAAGGK 289 Query: 536 LRFNPFAN---------------------ITDIDQSAERVRDQLSVMASPNGNLDEVHEG 574 + NP + + A +++ + +L + Sbjct: 290 GKINPLQIKVSSKDTQDDDSYEDNEEDTEEEKLSELAIHLKNLEVFFSLYINSLTDTKLA 349 Query: 575 LLLQAVRASW-------------LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDE 621 ++ +++ + L E+ ++D+ +++ + ++ + + D Sbjct: 350 IIKRSLIELYKIFNIDWDTDNSKLKAEDYPIMEDLYNYILSEAERMKDEGDDQFKEYED- 408 Query: 622 MIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII-YIEN 680 I L + A G +N +L DA+ VVL+ L+D + + L+ ++ Sbjct: 409 -IARLFEDVAKGGDSFLWNGH-TTLNSDAQFVVLDTKDLQDSSERIKGTEYYLLSTWMWA 466 Query: 681 RMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSD 740 M R R K + V DE + L+D + + F+ + R++ G+ I I+ ++VDF + Sbjct: 467 EMSR-DRTEKVVGVFDEAYLLIDKRVPQTLAFLRNASKRCRKYEGSMIIISHSVVDFLDE 525 Query: 741 KASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFG 789 +A +YK I + + QLY + + G Sbjct: 526 SVKMYGQALLDLPTYKFIFGCDGENLKQTKQLYNLNDSEEELLLSKNRG 574 >UniRef50_Q9ZLT4 CAG pathogenicity island protein 23 n=101 Tax=Helicobacter pylori RepID=CAGE_HELPJ Length = 983 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 111/867 (12%), Positives = 266/867 (30%), Gaps = 106/867 (12%) Query: 45 PYRDYNQESGLFMNDTTMGFMLEAIPINGAN------ESIVEALDHMLRTKLPRGIPLCI 98 Y + + + N+ ++ ++ I+ + ++ + R + Sbjct: 166 NYECFLDDGVILTNNYSLLGTIKLGGIDFLTTSKKDLIELHASIYSVFRNFVTPEFKFYF 225 Query: 99 HLMSSQ-LVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRH 157 H + + ++ + FS +A ++Y + L + + Sbjct: 226 HTVKKKIVIDETNRDYGLIFSNDFMRAYNEKQKRESFYDISFYLTIEQDLLDTLNEPVMN 285 Query: 158 YRVFISYCSPS-KKKSRADILEMENLVKIIRASLQGASI-TTQTVDAQAFI-----DIVG 210 + F ++ RA + ++ +++I L + I + Sbjct: 286 KKHFADNNFEEFQRIIRAKLENFKDRIELIEELLSKYHPTRLKEYTKDGIIYSKQCEFYN 345 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 ++ N R+ L L + ++ + G N S Sbjct: 346 FLVGMNEAPFICNRKDLY----LKEKMHGGVKEVYFANKH---GKILNDDLSEKYFSAIE 398 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 ++ + S+L + ++ FI ++ + + Sbjct: 399 ISEY--------APKSQSDLFDKINALDSEFIFMHAYSPKNSQVLKDKLAFTSRRIIISG 450 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 + +++ G L + +G+G ++ SY ++ F D+ E + ++ ++S Sbjct: 451 GS---------KEQGMTLGCLSELVGNGDITLGSYGNSLVLFA-DSFEKMKQSVKECVSS 500 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA--- 447 GF + F+ F + S N A+ + + A Sbjct: 501 LNAKGFLANAATFSMENYFFA---------KHCSFITLPFIFDVTSNNFADFIAMRAMSF 551 Query: 448 -----DNPLTPAGLLAPTYRNQLAFIDIFFRGM--NNTNYNMAVCGTSGAGKTGLI---- 496 +N + + + N +++ + + + + G++G+GKT + Sbjct: 552 DGKEDNNAWGNSVMTLKSEINSPFYLNFHMPTDFGSASAGHTLILGSTGSGKTVFMSMTL 611 Query: 497 QPLIRSVLDSGGFA---------VVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN- 543 + + + V D G MGG Y+ G NPFA Sbjct: 612 NAMGQFAYNFPANISKDKQKLTMVYMDKDYGAYGNIVAMGGEYVKIELGTDTGLNPFAWA 671 Query: 544 --ITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL- 600 + + + E+ + +SV+ NL + S+ ++ V + + Sbjct: 672 ACVQKTNATMEQKQTAISVVKELVKNLATKSDEKDENGNSISFSLADSNTLAAAVTNLIT 731 Query: 601 ----KNASDSEQYAESPTIRSRLDEMIVLLDQYTA--NGTYGQYFNSDEPS-LRDDAKMV 653 + ++ + + ++ L + NG + F++ L ++ Sbjct: 732 GDMNLDYPITQLINAFGKDHNDPNGLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTII 791 Query: 654 VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI 713 ++ D + + F L I+ M + + IDE W+ L + KV F+ Sbjct: 792 GVDGSSFLDNNDVSPFICFYLFARIQEAM----DGRRFVLDIDEAWKYLG--DPKVAYFV 845 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 +TAR+ TQ+I D A A KI L+ + Y +L Sbjct: 846 RDMLKTARKRNAIVRLATQSITDLL---ACPIADTIREQCPTKIFLRNDGGNLSDYQRL- 901 Query: 774 PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV---DPLSRAMYSSDGPDFE 830 + ++I K Q + S + + S+D + Sbjct: 902 -ANVTEKEFEIIT-----KGLDRKILYKQDGSPSVIASFNLRGIPKEYLKILSTDTVFVK 955 Query: 831 FVQQKRKEG--LSIHEAVWQLAWKKSG 855 + + + + ++A+ Q+ + Sbjct: 956 EIDKIIQNHSIIDKYQALRQMYQQIKE 982 >UniRef50_UPI0001C42939 hypothetical protein BpOF4_20614 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42939 Length = 667 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 91/632 (14%), Positives = 201/632 (31%), Gaps = 88/632 (13%) Query: 241 SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP 300 + + D+ + + P + + +++ P Sbjct: 46 NDGITFHNDHFQMQTALGVLKYGRSF-FIKPSGYPRTVRIGWLEGLFTSDDMDCSIHVEP 104 Query: 301 FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS 360 F ++ + K +E + L+ +K ++ ++ L+ ++ + Q+ Sbjct: 105 FNRSVAVR-----KLKTEIDRLEAVLDSAAKNDNHSRVEETMQKVQDTRFLQGQIRNNQN 159 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 + + + F ++ E ++ ELIS +L+ LP Sbjct: 160 GLYYVSVQASIFA-NSYEELNSKCVEVEREVSAESIELISAHGRQKEGWLSTLPLGRNYL 218 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 + + + + P + G+ N+ + + F NY Sbjct: 219 AKSD-------RNLDQQALTAIFPHSSSKLNHTGGIPIGVSGNEYVYYNQF--DAKLNNY 269 Query: 481 NMAVCGTSGAGKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYL----DGET 535 N+ V G SG+GK+ ++ +I G V+ D+ Y S+ + +GG + D Sbjct: 270 NLGVFGESGSGKSTFLKQVIGRGFMDGINRTVILDVEPEYVSMAQALGGTVIVIRSDDSQ 329 Query: 536 LR--FNPFANITDID------------------QSAERVRDQLSVM----ASPNGNLDEV 571 NP + + + + V + VM A L V Sbjct: 330 QSSRINPLDLYAEKEVKNPGTADEYIVERVNLTEKIKEVIEFFKVMKETTAGYEAKLTPV 389 Query: 572 HEGLLLQAVRASWLAKENRAR-IDDVVDFLKNASD--------------------SEQYA 610 G+L + + K D + + ++ D +E Sbjct: 390 ELGMLNDILENLYRVKYQITDDPDSLYEQVQKIDDVGNIQWERRYVPMPTISDVYNELLH 449 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP-----SLRDD-AKMVVLELGGLEDRP 664 + + +L ++I ++ +T +G F+ S+ D + ++V ++ L + Sbjct: 450 LAQSGEDQLVDLINVVKLFTQGKAFG-LFDGQTTLAGNASVNLDTSPIIVFDISKLSESG 508 Query: 665 SLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 + L+ +I NR + KK V DE W L +K +F + R+ Sbjct: 509 AERPLAQHVLMTWIWNRFVKNDPKSKKRIVQDEAWMTLRYKTWI--DFFKLLSARGRKWN 566 Query: 725 GAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDM 784 + ++Q ++ + A+ LKQS ++ A + + F D+ Sbjct: 567 VSLTLVSQR---YEMFHRTQEAQDIIAQLGSVAFLKQSDQDIACILETFK--FSGEVGDL 621 Query: 785 IGKFGAAKDQWFSSFLLQVENHSSWHRLFVDP 816 I +L+ +L +P Sbjct: 622 IRTADQG------EVILKAGK--EVVQLISEP 645 >UniRef50_Q6F059 Uncharacterized protein pXO2-09/BXB0008/GBAA_pXO2_0008 n=16 Tax=Bacillus cereus group RepID=Y6508_BACAN Length = 644 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 78/616 (12%), Positives = 182/616 (29%), Gaps = 78/616 (12%) Query: 238 VEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSI 297 + F +V+ + + H+ E + +N Sbjct: 17 YDLDFISRVQPQGGIKFNEKYIAQGDCYVACLHVYSLAEDIPPLWLTALMNN-------- 68 Query: 298 SCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY-AKWFPSVEKEAKEWGELRQRLG 356 I ++ + ++ + + N +L+ + + + E + + + + Sbjct: 69 -KDTISSVDVATANKEEVVKDINRSITELKDRMTSERRSTDRDDAHWELQNLTDFARSIT 127 Query: 357 SGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFM 416 V L I + E + DI ++ F + T Sbjct: 128 QQGEIVKLVKLRIYIYDPV-LEQLEKRIGDIKKEIAGQNYKAQVYVFKQKEEWQTLF--- 183 Query: 417 AGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGM 475 A + S N+ +P + P G+ T +D FF Sbjct: 184 ASYDDQIEYLGVKSGYPLPSKNIGFGIPFHHQDLKDPRGIYLGQTSTGGAFILDPFFSTG 243 Query: 476 NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGE- 534 T+++ + G GAGK+ L++ L ++ F FD Y ++ + GG +D Sbjct: 244 TRTSFSGFIFGKMGAGKSTLLKQLEEGLVAKDCFIRGFDKARDYYTVVQQQGGKIIDLSG 303 Query: 535 --------TLRFNPFANITD-------IDQSAERVRDQLSVMASPNGNLDEVHEGLLLQA 579 T NP +D+ ++ V E + ++ + Sbjct: 304 VQDSEEVETGMINPLEVFATKITNTGAVDEKGSFIQHISKVTNMIRFLNTEFDDTVIQEF 363 Query: 580 VRASW----------------------LAKENRARIDDVVDFLKNASDSEQYAESPTIRS 617 + + + ++D +L N + +P Sbjct: 364 RKHLYAFYIEWGLVPQKGSDRPYKVTGYPPNHYPILEDFYKYLSNLK--LEAGATPQRHR 421 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLI 675 L+ + + ++ YG FN + ++V ++ G+ S+ +F+ + Sbjct: 422 DLEAIKLQVEDMIT--VYGDMFNGHTTLKNFENEQIVFFDIDGISKYDKSVFNCQLFTAL 479 Query: 676 IYIENRMYRTPRNLK---------------KLNVIDEGWRLLDFKNHKVGEFIEKGYRTA 720 I + + R +K + +DE +++ +N ++ + R Sbjct: 480 TLIWSHALKNGRQMKYLREEKNLSIEDVKYFMVFLDECHNVINSQNEFANRYVLEFEREM 539 Query: 721 RRHTGAYITITQNIVDFDSDKAS----SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 R+ TQ+ + S S +A + + YKI L + + Sbjct: 540 RKFFAGIFFATQSPQEMLPPPGSTVDVSTMKAIFELTQYKIFLNMDNSVLETLKSVLGES 599 Query: 777 FLPLQRDMIGKFGAAK 792 + ++ + + Sbjct: 600 LTESEFRILPELKRGE 615 >UniRef50_Q98QH8 TRSE-LIKE PROTEIN n=1 Tax=Mycoplasma pulmonis RepID=Q98QH8_MYCPU Length = 853 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 91/651 (13%), Positives = 232/651 (35%), Gaps = 75/651 (11%) Query: 175 DILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN 234 D ++ N ++ I L+ A + I+++ ++ + K +LD N Sbjct: 219 DKEKLSNEIEKISLMLKIAGFENFQLSNVDQINLISKIN-------FFKNLELDSEYLEN 271 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPE 294 + ++ K D + + N + + P ++ + + Sbjct: 272 TNNINENLKSKFEFDKFEINKKHLKIN-DYFVNLQSVEEFPFEILPGWASNIFKS----- 325 Query: 295 LSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK-EAKEWGELRQ 353 + ++ + N ++ S K EK + EL + Sbjct: 326 -----DSTVIWHFNSVEEDQAKVLINKAIINSRVNSINVKNKVDIEKEKFIIHNFEELAK 380 Query: 354 RLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCL 413 ++ G+ S+ + N + ++++ + + + ++ + + F Sbjct: 381 KIAFGKESLKRSSIIFINKS-TNKKDLIKLQNENIKNANLINIKINNCLYTQFNYF---- 435 Query: 414 PFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFF 472 K K + A P + L T +++ +DIF Sbjct: 436 ----SKSFLKASSFDKNELFLPADTFAESWPFSTSSVNDGNSLFLGKTEQDENIILDIFT 491 Query: 473 RGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD 532 + + N+N + GTSG+GK+ L + ++ + + SG ++ D + Y + + + G ++ Sbjct: 492 KNDDRKNFNTFILGTSGSGKSTLAKKILANQITSGNKVIIIDPENEYATFSKRLNGENIN 551 Query: 533 G---ETLRFNPFANITDI--------DQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVR 581 NP I + + +++ ++ L+E ++ V Sbjct: 552 LNINSDKSLNPLEIIDNFLDDFETSKNNHLMWLKEWFKIL---YKELNEEDLRRIIFNVN 608 Query: 582 ASWLAK-------------ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD- 627 + + ++ I D++ LK+ D L ++I +L+ Sbjct: 609 LLYSDEIFLSKIKDKSISSKDFPIISDLIKILKSNDDKS-----------LKKIINILEF 657 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAV--MFSLIIYIENRMYRT 685 + NG + + +N + +L + +VV+ + + + S + +F+++ +I+ + Sbjct: 658 DFENNGKFSKLYNKSK-NLNFENNLVVINVKDIYETTSKEFLINSLFTILGFIQREINLN 716 Query: 686 P-RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF-DSDKAS 743 + K + DE +D N + F+ + + R++ G+ I TQN DF + S Sbjct: 717 RFKKEKLVIFFDEAHLFIDKDNLEALNFLFRTIKRIRKYNGSVILATQNPSDFNLEGEVS 776 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYP--DQFLPLQRDMIGKFGAAK 792 + A N+ Y L +++ + ++++ ++ ++ K + Sbjct: 777 RKSLAIISNTQYTFFLNLRSEDISNVSKMFSSTGGISEEEKKILTKAKKGQ 827 >UniRef50_B1I0C3 Putative uncharacterized protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0C3_LYSSC Length = 631 Score = 248 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 91/659 (13%), Positives = 207/659 (31%), Gaps = 95/659 (14%) Query: 244 LKVRADYLTLGLRENGRNSTARILNFHLA--RNPEIAFLWNMADNYSNLLNPELSISCPF 301 ++ +DY + + G + +F++ P + + + S PF Sbjct: 6 IEFHSDYFII---QIGIGTKKYGRSFYIKPSGYPRKVRIGWLVGLFKAEDINVSVHSKPF 62 Query: 302 ILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSS 361 T + + ++ + + K A ++ ++ ++ LR+++ + +S Sbjct: 63 DRTDAVR-----QLKNKLDDYETVVISAQKQDNAGKIEAIGQQVRDAKTLREQIQNNMNS 117 Query: 362 VVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGL 421 + ++ T + D E E + + E+++ FL+ P A Sbjct: 118 LHFTSISATIYA-DTLEELNEKSVAVERALAAESIEVVNAYDRQKEGFLSTQPLGANYL- 175 Query: 422 FKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYN 481 + + +A + P + G+ Y N+ + + F +++ Sbjct: 176 ------KNSERNLDENALAAMFPHNSSTLNHTGGMPIGVYNNEYIYFNNF--DSKLESFS 227 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGG-FAVVFDMGDGYKSLCENMGGVYLD-------G 533 M + G SGAGK ++ +I G ++ D+ Y L +GG+ ++ Sbjct: 228 MGIFGISGAGKGVFVKTVIGRGYLDGITKNIILDVEPEYTELTYALGGIVIELRSDDVVS 287 Query: 534 ETLRFNPFANITD------------------IDQSAERVRDQLSVMASP----NGNLDEV 571 R NP + I++ + + VM + NLD Sbjct: 288 NFSRINPLDVYVEKEVKRRYTPFEYIVEKVNINEKVKEAIEFFKVMKESTYPKDPNLDPH 347 Query: 572 HEGLLLQAVRASWLAKENR------------------ARIDDVVDFLKNASDSEQ--YAE 611 L + ++ + + V + SD + A Sbjct: 348 ELDALDKILKKLYAKCGITEDPESLYYHEEGMDEQGNIIFNRVYKKMPTISDVHRDIQAL 407 Query: 612 SPTIRSRLDEMIVLLDQYTANGTYGQYFNSD----------EPSLRDDAKMVVLELGGLE 661 L ++ ++ + A ++G + P+ D++ +V ++ L Sbjct: 408 VENGNEMLKNLLSVVSLFLAGRSFGMFDCQTDIRDKDGNPLPPTALDESPIVTFDISKLS 467 Query: 662 DRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTAR 721 L+ ++ NR+ KK + DE W +L F + EF + R Sbjct: 468 KNGIERPLAQHVLMTWVWNRLIVNNPKEKKRVIQDEAWMMLKF--PSMIEFFKTLSARGR 525 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + + ++Q ++ + AR +KQS+ + K + + F Sbjct: 526 KWNVSLTLVSQR---YEMFHRNEEARDIIAQLGTVAFMKQSSSDVEKILEAF--HFSDDV 580 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 +I ++ + V S Y + V + +G Sbjct: 581 GQVIRTAEQGD-------VVMKAGKEIVYFHVVPTESEWQY-INTNMNVTVDELIAKGG 631 >UniRef50_D1PSM3 Putative uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSM3_9FIRM Length = 881 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 105/780 (13%), Positives = 224/780 (28%), Gaps = 80/780 (10%) Query: 85 MLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERF--NAITRAYYMKAAATQ 142 P + M+ + + IE R F F + I +K Sbjct: 134 RFYRYYPPNTDV----MTDEEIAQEIEQLCRLFDSLRCPFTMFGTDKIEDMSALKEYYRS 189 Query: 143 FPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA 202 P L + + S ++ I + ++ I + G V Sbjct: 190 LPRRYDHILADVVNEIESTETKSSAVQRAY-YFIYKAQSEEDDIYTLIVGKGYKIDRVKN 248 Query: 203 QAFIDIVGEMI-----NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRE 257 ++ + N + ++ + + + ++ + + Sbjct: 249 DEMAVLLRNYLVREFINVDIYTIAEEVKNYPNMAKAKPAIYNKEIQRRLCPNRIDFTRDH 308 Query: 258 NGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHS 317 ++ R + P + S T+ + + Sbjct: 309 AEQSGLMR-RTLMIKNFPAQIPPRALYTVASM---------RGTSFTMRMTPLQKDNARK 358 Query: 318 EANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNN 377 + + + S A +E + + Q+++ S + I + K Sbjct: 359 LIDEQIRNKAVIGGKSQATEQMDAAQETMDIKNFYAEVTRNQNTIYSVNVYIEIYGK-TL 417 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 E +EQ + G + F + P + S Sbjct: 418 EDLANLEQQVKIELAGVGITYDQLNYEQRNGFSSVQPLGSDH-------FILCSNNLPSK 470 Query: 438 NVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLI 496 VA L P + + P G+ T R + DIF R TN + G++G GK+ L Sbjct: 471 TVAALYPFSYSSLIHPHGMPLGRTDRGGPVYADIFQRDDQITNGVFFISGSAGQGKSYLQ 530 Query: 497 QPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD--GETLRFNPFA-----NITDIDQ 549 + ++ ++ G V D + Y + +GGV +D + N F D+++ Sbjct: 531 KKILTFMVTRGVHCYVMDPENEYSDVTRGLGGVVIDCASGNHKINIFEVRRIKLEDDVEE 590 Query: 550 SAE-------------RVRDQLSVMASPNGNLDEVHEGLLLQAVRASW------------ 584 AE + + + L+ V+ + Sbjct: 591 GAELPEISNESPMFLQHLSWLKDEFRIMMPEMPDSTLRALMILVQGMYASVGIDQHTDFD 650 Query: 585 -LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE 643 L ++ + DF++ Y + + E+++ ++ T G FN Sbjct: 651 RLQHQDYPTFSTLYDFVQKQLGKNSYP--MLTKEMISEVLLYINDPT-YGELSNIFNGTT 707 Query: 644 PSLRDDAKMVVLELGGLED-RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLL 702 + ++ +G L + L AV +L YI + + R + L DE + L Sbjct: 708 TIDVKNNPLICFSMGALLEGSEQRLQAVENNLNTYIWSIVLL--REFQVLLSFDELYMYL 765 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS 762 + + ++I R +R++ TQ + D + + SS+K + Sbjct: 766 --EQPLMAKYISYFARRSRKYNACIGVATQQLQDCLDESVRRYSSPIINMSSFKFLFYSG 823 Query: 763 AKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 + + + I LL+ N + + P ++ Sbjct: 824 QVDLQDMKEALK--LTDGEAACISVSNKRH------CLLKAGNGKYYMEVGTLPFEAELF 875 >UniRef50_Q3ZVN3 TRSE-like transmembrane ATPase n=8 Tax=Spiroplasma RepID=Q3ZVN3_SPICI Length = 840 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 83/573 (14%), Positives = 182/573 (31%), Gaps = 38/573 (6%) Query: 273 RNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT 332 + + +++ S ++L + D + + + + +T Sbjct: 280 KFVSYFTVNQFPLIVNDMWLSNFSEIENVNISLRVRHLDNMTAFKLLDRAIRRAQDQ-ET 338 Query: 333 SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFR 392 A + + EL Q + G ++ + T F D+ +V ++ N Sbjct: 339 KKASEDIEYNLYLQNFNELLQLIQVGGETLKMVSIIFTCFA-DSKTGLDQVVSNLKNEMI 397 Query: 393 KNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLT 452 +N F + F + L K + Q + +A P + Sbjct: 398 RNRFTVNDLTFRQFTTYKFLL-------FNNNDKLKNIEQEMATITLACSWPFPSKPLND 450 Query: 453 PAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAV 511 P GL+ + Q DI + ++N + G G GKT ++ + + + Sbjct: 451 PCGLIMGENEQIQPIIFDIKTKSSIRASHNAFIVGQMGFGKTFNVKKQLNWLYCNNTKIY 510 Query: 512 VFDMGDGYKSLCENMGGVYLDGETL---RFNPFANITD-IDQSAERVRDQLSVMASPNGN 567 + D Y S GG ++ + NP TD + + + S + Sbjct: 511 IIDPQREYGSFANYHGGEIIEFGNNPKAKINPLEIFTDNFSEHISLLEQWFKNLYS---D 567 Query: 568 LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLD 627 L + L + + + + A + K+ T + + + +L Sbjct: 568 LTNIDLAKLQEYIIQLYKNFKITADTNLSQLTRKDYPILIDLYNLITKKEQDTLLEKMLW 627 Query: 628 QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR 687 + T G G FN L + ++V ++ + ++ A M+ L+ ++ M + Sbjct: 628 KLTK-GADGTLFNGVST-LEIKSDLIVFDIYNMAKSKTIANAQMYLLLALLDRVMKKNKE 685 Query: 688 NLKKL---------NVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFD 738 + L +DE L++ N ++ +T R+ G +TQ+I DF Sbjct: 686 DNLNLPPEQQSWVCIAVDEAHLLINEDNLLALNYLFSLSKTCRKFNGILFILTQSIGDFT 745 Query: 739 S--DKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ--FLPLQRDMIGKFGAAKDQ 794 + AR +Y+ I ++ Y +L D ++++I Sbjct: 746 QHGENVKRQARGIIEQCTYQFIHHLNSIGLQNYTELLTDNNMINAYEKNVILTPKKG--- 802 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGP 827 L + + ++ + Sbjct: 803 ---LCLFSINDKRYILQVIATSEEIKAIGTQED 832 >UniRef50_UPI0001979712 VirB4 type IV secretion ATPase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001979712 Length = 781 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 104/802 (12%), Positives = 233/802 (29%), Gaps = 66/802 (8%) Query: 49 YNQESGLFMNDTTMGFM-LEAIPINGANESIVEALD-HMLRTKLPRGIPLCIHLMSSQLV 106 Y++ + + +G + LE N A E + L + + + ++ + Sbjct: 35 YDEYFLITKGENFVGAIELEGFNYNSATEQRLIDLSIDRINSLNALNDTMEARIVVRRRE 94 Query: 107 GDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCS 166 + ++ + ++ R + G + + S Sbjct: 95 MTYNRKYEIDNIYASKLINQWENNQRVFVNSYLVIFETKNTGTKGFFEKKKLEMTTSITE 154 Query: 167 PSKKKSR--ADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKR 224 S + ++ ++ +L + +++ + E IN + Sbjct: 155 DSDNNITYVNKLTILKATIERFMQTLSIY--EPKMLNSTDILRFYAEYINGVYIPIKAHN 212 Query: 225 RQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMA 284 L + DY + + Sbjct: 213 GLLSDS--------YIGSLVSFHKDYFIQDFN----GHKIFNRFIGIKAY-------DTE 253 Query: 285 DNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKE 344 + S ++ L L++ + K ++ K +K Sbjct: 254 EITSLTISNILHSHYELDFYLSIDSISKEKAQAKIKQKMKLAPSFAK------------- 300 Query: 345 AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFN 404 + +L++ + S + + + I K + + E ILN + G ++ N Sbjct: 301 -AQLHDLKEMIDSDRLYMQNLSYTILIKAK-SKDELNEASGTILNELKNAGLIAVNETLN 358 Query: 405 HMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQ 464 F + P + K+ + + F + ++ L Sbjct: 359 LQPTFFSMFPNKSFLNARKRTHTSKSISTMILFE-KEYLGKTKNSWGDTPVTLLKNQSMS 417 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 + + + G +GAGKT L+ L+ ++ + D +G S E Sbjct: 418 PYLFNFHADDTKQVVGHTMIVGGTGAGKTTLVSFLMANLFKYDIDLLALDRLNGLYSFTE 477 Query: 525 NMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASW 584 + G Y +GE NPF D +S + L M N E L+++ + Sbjct: 478 FLDGEYNNGEDFYINPFTLPDDT-ESVTFLTSWLVSMIGLNPEPTTQEEAEKLKSIESVI 536 Query: 585 LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEP 644 + + S + + +++ + + L++Y N FN + Sbjct: 537 RNLYHHLTP-------QGQRFSLKDVQQNIVKTNDQHIPLQLERYLQN----PLFNKEHD 585 Query: 645 SLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDF 704 +L K+ L + + + + L + R + + IDE L Sbjct: 586 ALEFKKKLTTLNMDFIIENEKDAGLIAHYLFHKMIYRAKNSNKG--CFIFIDEFKSYLS- 642 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAK 764 N E I AR+ Q++ D+ K A + N ++ II S Sbjct: 643 -NPTFNERIALTLTQARKVNSVLAMAFQDMHQLDNVKN---AESFVRNLAHIIIFPTSDI 698 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL--SRAMY 822 E Y + + + G + + L+ S+ + + L + Sbjct: 699 EI---FAKYNIHLADNEINFLVNTGQNERKVLIKNLID-PTKSNIIDVNLARLGKYLKIL 754 Query: 823 SSDGPDFEFVQQKRKEGLSIHE 844 SSD +++ + + + E Sbjct: 755 SSDSDTVNTIKKLKVQHPNWKE 776 >UniRef50_A8L0V0 Type IV secretory pathway VirB4 protein-like protein n=9 Tax=Actinomycetales RepID=A8L0V0_FRASN Length = 657 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 92/616 (14%), Positives = 186/616 (30%), Gaps = 65/616 (10%) Query: 236 QCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPEL 295 Q + L + + + + P + P L Sbjct: 33 QMLPVEGPALFTPPALVVDAGQIEVSGICAT-TITVVGYPREVGP--------GWMEPLL 83 Query: 296 SISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWF---PSVEKEAKEWGELR 352 + + L + + LE + A P ++ A++ GEL Sbjct: 84 AYPGRLDVALHIDPTPPAVAALRLRRQLGRLESGRRADAAAGRLADPELDAAAQDAGELA 143 Query: 353 QRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC 412 +++ G++ + L +T + D+ E E + + R+ ++ +++ Sbjct: 144 RQVARGEARLFRTGLYLTVYA-DSREELAEEAARVTALAHSLLLTVRRARYRSVQGWVST 202 Query: 413 LPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA--------DNPLTPAGLLAPT-YRN 463 LP + + ++ +A +P + P + + Sbjct: 203 LPLGLDLLQIR--------RAMDTQALAAGIPFTTPDLPLPDVERPGAAPVVYGTNLHSA 254 Query: 464 QLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLC 523 + D + + NYN G SGAGK+ L++ + L G A + D D Y L Sbjct: 255 GIVAHDRWAQP----NYNSVTTGASGAGKSFLMKLDLLRSLYQGVEAAIVDPEDEYGRLA 310 Query: 524 ENMGGVYLDGETLR--FNPFANITDIDQSAERVRD-------QLSVMAS---PNGNLDEV 571 +GG L NP + + ++ + + + L Sbjct: 311 AAVGGTRLALGEPGVHLNPLDLPAHSHHDPDLLTRRALFCHTLITTLLAGTDDDSGLGAG 370 Query: 572 HEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 L A+ +++ A A + + L + Sbjct: 371 GRAALDAAILSAYRAAGITHDQATWTRP-APLLADIAAALTAAEDPAGPALAARLAPFVT 429 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKK 691 G + + + +VV L L D L A + I + R ++ Sbjct: 430 GSHAGLF--AHATTTSPTGHLVVYSLRALPD--ELKAAGTLLTLDAIWRTVADPARRRRR 485 Query: 692 LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWG 751 L V+DEGW L+ + F+ + + AR+H TQ+ D S S RA Sbjct: 486 LVVVDEGWLLM--AHPAGARFLFRLAKAARKHWAGLAVATQDSADLLS---SELGRAVVA 540 Query: 752 NSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHR 811 N++ +I+L+Q +++ + + G LL Sbjct: 541 NAATQILLRQDPTVIDDLRRVHRLTDGEATQLLTAGPG--------DALLLTGTGQRTAL 592 Query: 812 LFV-DPLSRAMYSSDG 826 + P + ++D Sbjct: 593 HALASPAEYDLITTDP 608 >UniRef50_A7VRX8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VRX8_9CLOT Length = 800 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 111/819 (13%), Positives = 236/819 (28%), Gaps = 88/819 (10%) Query: 50 NQESGLFMNDTTMGFMLEAIPINGA--NESIVEALDHMLRTKLPRGIPLCIHLMSSQLVG 107 +Q S + + + F+L P+N + ++ +V L L L I +++ Sbjct: 26 DQSSVITPDGQRISFIL-ITPVNMSVLSDEVVAGRISALANILTSIENLQILCLNASQSY 84 Query: 108 DRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSP 167 ++ + L E E + R + + G +R + Sbjct: 85 EKNKEHLAAQMK-TETNEVLAELDRKDIEYLDDIRISMATGREFAFAVRFKK-------- 135 Query: 168 SKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQL 227 + E +K + L A T + + Q I+ + + Y Sbjct: 136 -----NIGRPQQEQTLKRLLLILLEAGFTARIAEEQELKGILAIYFAQDIYNDYWPDFDG 190 Query: 228 DPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNY 287 + E SF + + + + + + P + Sbjct: 191 EEILSPAEAKQEKSFLELIAPSIIDFRRQRYYVCGNTQRTVWAVRGYPTTTKDQTIFREL 250 Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 L I T + + K A + + S K E ++ Sbjct: 251 GEKDGVTL-----HIYTRPVGSYETNKILERAERRNRHMLNNSSRIKEKV--EAESNMQD 303 Query: 348 WGELRQRLGSGQSSVVSYFLNITA-FCKDNNETALEVEQDILNSFRKNGFELISPRFNHM 406 L + + + + N++ ++ D+ ++ Sbjct: 304 VQLLIENMHRSKEPF--LHCAVFIEMAAGNDKALELLQGDVAAILNRHKILYDKLFLQQK 361 Query: 407 RNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQL 465 ++ +P + L E + + +VAN+ P P G+ Sbjct: 362 EGMISAMPTG------QNLFENQFERVLPASSVANMFPFSYSGKTDPQGMYIGRDANGSN 415 Query: 466 AFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCEN 525 ++ RG + TN ++ + G SG GK+ L++ L S + D + YK L E Sbjct: 416 IIVNFDQRGQDKTNGHIIILGNSGEGKSFLLKILSCIFRQSRKNLYILDPENEYKELTEA 475 Query: 526 MGGVYLDGETLR--FNPFAN----------ITDIDQSAERVRDQ--------LSVMASPN 565 +GG Y+D T + NP + D + L S Sbjct: 476 LGGTYMDMMTGKYIINPLEPRLWNQEPVSELESPDTPKAFFKPLRINQHIAFLRDFFSAY 535 Query: 566 GNLDEVHEGLLLQAVRASWLAKE-------------NRARIDDVV----DFLKNASDSEQ 608 L + + + + D+ L+N + + Sbjct: 536 KPFPTEQLDTLEIMLELLYKEFHITEETDYSRLRSSDYPILTDLYKLMTRELENYEEKAE 595 Query: 609 YAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGG-LEDRPSLL 667 + L E+ + L G YFN +AK + + L SL Sbjct: 596 TGLVVYRKETLRELCLGLHGICT-GAESVYFNGYTN--IPNAKHIDFGVKDMLSTNQSLS 652 Query: 668 VAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAY 727 A+ F+++ ++ ++ DE LL KN ++ + R+ Sbjct: 653 NAMYFNILSFMSHKFLTEGD---TNICCDELHELL--KNRIAISYLLSFIKRGRKRGSNV 707 Query: 728 ITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGK 787 I +QN+ DF + + +++ + + + +Y ++ Sbjct: 708 ILASQNVSDFFLPEIVEYTKPLLSIPTHRFLFYPGSCDTEEYKRVLGVSDSEY------- 760 Query: 788 FGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 ++ L N + +A++ + G Sbjct: 761 -RVIQNPNRGHCLYSCGNERYHLHVIAPKYKKALFGTAG 798 >UniRef50_A4VUZ6 Type IV secretory pathway, VirB4 component n=22 Tax=Streptococcus RepID=A4VUZ6_STRSY Length = 783 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 96/783 (12%), Positives = 234/783 (29%), Gaps = 100/783 (12%) Query: 73 GANES--IVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAI 130 G ++ IVE ++ + L + + + ++ ++ + + + Sbjct: 69 GLDDKGAIVEKYSDLINS-LDDQTNFQLTIFNQKVNLEKFRKSILYPLQEDGFDAYRDEL 127 Query: 131 TRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASL 190 R L G N ++ F+S+ + + + + + ++ Sbjct: 128 NR-------MMDANLEAGENNFSAVK----FLSFGKSDQTP-KVAFRSLSQIGEYFKSGF 175 Query: 191 QGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADY 250 + + + ++++ +M+ + + + Y Sbjct: 176 SEIDVALGLLGGEERVNVLADMLRGENHLPFSYKDLTLSGQT---------TKHFIAPTY 226 Query: 251 LTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVE 310 L+ + + + ++ + + + +++L Sbjct: 227 LSFKHKNHIELDDRLLQIVYVRDY--------GMELGDKFIRDLMQSDLEVMISLHAKGS 278 Query: 311 DQVKTHSEANLKYMDLEKKSKTSYAKWFPS----------VEKEAKEWGELRQRLGSGQS 360 + +T ++ K +E + K + +E E L Q + Sbjct: 279 TKSETMTKLRTKKTLMESQKIGEQQKMARTGIYLEKVGHVLENNINEAEALLQTMTQTGD 338 Query: 361 SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG 420 + I D + + I N + + + F + LPF Sbjct: 339 KLFDTVFLIGVLA-DTEDQLKQSLDIIKQVAGSNDMIIDNLTYMQEAAFNSLLPFGKNYL 397 Query: 421 LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY 480 GV + + N+A P + + G + I I Sbjct: 398 E-------GVSRSLLTSNIAVNAPWTSVDIQDKGGKFYGINQISSNIISI--DRGKLNTP 448 Query: 481 NMAVCGTSGAGKTGLIQPLIRSV----LDSGGFAVVFDMGDGYKSLCENMGGVYLDGETL 536 + + GTSGAGK + I S DS ++ D + Y + + GG +D Sbjct: 449 SGLILGTSGAGKGMATKHEIISTKLKEADSDTEIIIVDPENEYSIIGQAFGGESIDIAPD 508 Query: 537 RFNPFANITDIDQS---------AERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAK 587 + D++ +E + + + + +D + L+ + R ++ Sbjct: 509 STTFLNVLDLSDENMDEDPVKVKSEFLLSWIGKLL--DRKMDGREKSLIDRVTRLTY-KH 565 Query: 588 ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 + + + V L + E ++ + ++ Y F S +++ Sbjct: 566 FDTPSLVEWVFVLAQQPEQE-----------AKDLALDMELYVEGSL--DIF-SHRTNIK 611 Query: 648 DDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPR-NLKKLNVIDEGWRLLDFKN 706 D+ ++ + L D L + + I NR+ + + K DE LL + Sbjct: 612 TDSHFLIYNVKKLGD--ELKQIALMVIFDQIWNRVVKNQKLGKKTWIYFDEMQLLL--LD 667 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 +F K + R++ ITQN+ D R NS + I+LKQ+ + Sbjct: 668 KYASDFFFKLWSRVRKYGAIPTGITQNVETLLLDAN---GRRIIANSEFMILLKQAKSDR 724 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRA--MYSS 824 + + + L++ + + + ++ + S+ Sbjct: 725 EELVHML--GLSKELEKYLVNPEKGAG------LIKAGSTVVPFKNKIPQHTKLFDIMST 776 Query: 825 DGP 827 D Sbjct: 777 DPE 779 >UniRef50_C4XEH5 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEH5_MYCFE Length = 700 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 95/666 (14%), Positives = 227/666 (34%), Gaps = 54/666 (8%) Query: 175 DILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN 234 ++ +++ S + I V ID + N + ++ Sbjct: 15 EMNKLKQYENEFIKSFETTKIPLNVVTGMELIDFANMIFKKNISKSDKQNYFVEELDTEL 74 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNS--------TARILNFHLARNPEIAFLWNMADN 286 + ++ + D + L+ + + ++ + E + D Sbjct: 75 TKELDMKMQGQKLNDKVIKKLQSDKEYKLISLLAPERVEFNSKYIKVDNEYLSFQTLVDF 134 Query: 287 YSNLLNPELS---ISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEK 343 S +N + + ++ L ++ + E ++T + Sbjct: 135 NSLQINEGWACDLFNSESLVIWNLKPINESTKQKILDKAMSLNEANAETKSNFKMQKISV 194 Query: 344 EAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRF 403 E K EL + + ++ + K E ++E + +K + + Sbjct: 195 EQKVLDELVDFINVQKMNLFDSNIIFVNQSK-TLEGIKDLETKNDINAKKAFANVYKMHY 253 Query: 404 NHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TY 461 + + F + S N+ P ++++ L T Sbjct: 254 LQKQALQNSI--------FIKDDFLNNGIEMSSRNIVYGWPWISNSLNDGNNFLLGFTTT 305 Query: 462 RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 + D+F + + T+++M + G G+GK+ + G ++ D YK Sbjct: 306 SSSPVIFDLFKKTKDRTSFSMIIWGVPGSGKSATTSKIALHQFVVGNEVIIIDPQREYKD 365 Query: 522 LCENMGGVYLD---GETLRFNPFANITDIDQSAERVRDQL----------SVMASPNGNL 568 LC+ + G +++ G + NP +I++ +V D+L + +L Sbjct: 366 LCKKLDGNWIEMGKGLETKINPLQINYEIEKDNIKVSDELLISNHTKMVKEFFSLLYPDL 425 Query: 569 DEVHEGLLLQAVRASWLAKENR----------ARIDDVVDFLKNASDSEQYAESPTIRSR 618 D + + +L+ + + + D + FLK+ ++ AE S Sbjct: 426 DARDLRVANFLLNEFYLSNKIKNIQKLKNTDFPTMKDYIKFLKSYKFKDKKAELYYKDSL 485 Query: 619 LDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDR--PSLLVAVMFSLII 676 I+ + NG + +N ++ + + V++ L + + A ++ ++ Sbjct: 486 NKLSIIFDQDFNNNGIFSNLYNGH-TNINFNKTLTVIDTYNLINNIASNEGQASLYLILS 544 Query: 677 YIENRMYRT---PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 Y+ NR+ + K ++DE R ++ N EF+ +T R++ G+ I TQN Sbjct: 545 YVRNRISNNFFENKTRKICLIVDEAHRFINANNMSSLEFLFDTVKTIRKYNGSVILTTQN 604 Query: 734 IVDF-DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY--PDQFLPLQRDMIGKFGA 790 DF SD+ + + N Y +I +Q+ +Q+Y ++ +++ + Sbjct: 605 PSDFELSDEVMNLTKGMVENIQYTLIFRQNQNGVNAISQMYKSKNELTNWEKNFLTSAPI 664 Query: 791 AKDQWF 796 + Sbjct: 665 GNGMFS 670 >UniRef50_B2TS95 Putative uncharacterized protein n=8 Tax=Clostridium RepID=B2TS95_CLOBB Length = 637 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 90/632 (14%), Positives = 198/632 (31%), Gaps = 69/632 (10%) Query: 247 RADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLT 306 YL ++ G + L+ + +L ++T+ Sbjct: 15 HNPYLLSKIQPVGGIAFNPSSIRKGDGYEACIHLYEYQTTVNTFWLEQLLNFDDVVVTVD 74 Query: 307 LVVEDQVKTHSEANLKYMDLEKKSKT-SYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSY 365 + ++ + N + + + L + S + Sbjct: 75 VSTANKQDALEQINRSISENLTRIDEVANNIDKIEASNTVDNLTSLVYDITSKDEIIKIV 134 Query: 366 FLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQL 425 + + + + + IL G+ + + +L Sbjct: 135 TIRYFISAR-TIDELDKKAKTILERLEGLGYRGAIFLNEQEYEWKSLF---LSSTEQSKL 190 Query: 426 KEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY-RNQLAFIDIFFRGMNNTNYNMAV 484 + S + P P G+ T D+F + +YN V Sbjct: 191 PNKRNEKGIPSISFGGGYPFHFTELNDPTGMYLGTTKTGGNVIFDLFTKDDIRKSYNALV 250 Query: 485 CGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNPFA 542 G G+GK+ L++ ++ + +FD+ +K+L +GG + DG NP Sbjct: 251 IGLMGSGKSTLLKKILNNNGIVNNTIRIFDIAGEFKTLVRILGGEVIALDGSDGIINPLQ 310 Query: 543 NITD-IDQSAERVRDQLSVM------------ASPNGNLDEVHEGLLLQAVRASWLAKE- 588 ID+ + ++ S M +PN N +E+ E +++ + + Sbjct: 311 IFATIIDEDTNEILEEQSYMQHLSKVSMMYQFLAPNANSNEIRE--FEKSLSNFYSSFGI 368 Query: 589 -----------NRARIDDVVDFLKN------ASDSEQYAESPTIRSRLDEMIVLLDQYTA 631 ++++++FL N + + + RL+ +I+ L+ Sbjct: 369 DTRKATQYETNEYPIMEELIEFLLNELYENVQKGILKANITNNRQERLENIILTLEGTVR 428 Query: 632 NGTYGQYFNSDEPSLRD-DAKMVVLELGGL-EDRPSLLVAVMFSLIIYIENRMYRT---- 685 + YG+ FN + ++V E+ L + + A F+++ + N Sbjct: 429 D--YGKLFNGHTTIKDITNKQIVSFEVRNLVQFDKRIFNAQTFNILTMLWNNALLQGLVE 486 Query: 686 ----PRNLKK-------LNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNI 734 K L ++DE + ++ N +++ R AR++ G I TQ+I Sbjct: 487 KKAFDEGRKTTMEAIKYLVLMDEAHKFINSNNIMAVDYLINFEREARKYFGGLIFATQSI 546 Query: 735 VDFDSDKASSAA----RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 D D SS A R + + YK I++Q +++ Q + + + G Sbjct: 547 RDVVPDNTSSEALEKIRTLFELTQYKFIMQQDNNSKKSLAEIFDGQLTESEIETVPFMGT 606 Query: 791 AKDQWFSSFLLQVENHSSWHRLFVDPLSRAMY 822 L + + ++ Sbjct: 607 GD-----CILSINGGKNIRFHIEASDKELELF 633 >UniRef50_Q8E597 Putative uncharacterized protein gbs1135 n=2 Tax=Streptococcus RepID=Q8E597_STRA3 Length = 796 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 92/811 (11%), Positives = 241/811 (29%), Gaps = 91/811 (11%) Query: 46 YRDYNQESGLFMNDTTMGFMLEAIP---INGANESIVEALDHMLR--TKLPRGIPLCIHL 100 Y ++ + + D + + I G+ + ++ +++ + L + + Sbjct: 41 YTSLFEDGLMHIVDESYSKTWQLGDTNYITGSEDEKLDIIEYYVDALNGLDSENTYQLTI 100 Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV 160 ++ + ++ + R Y ++F + Sbjct: 101 LNRPVPTTLLDQITYDLEGDERDV------FRKEYNNIIRSRFAKDQNNF------KVEK 148 Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL 220 F++ + +K + + ++ ++ Q + +++D ++I +++ NP Sbjct: 149 FVTVSTRAKDR-KQAYRKLNDVDTHFTTQFQLVDVLLKSLDGTERLNIFADLLRGNPYLD 207 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFL 280 + L+ + L + D + + P Sbjct: 208 VDYKDVRISG--LSTKSFIAPGRLWFQPDQFMMDKKYCKIL------------FPRTFPA 253 Query: 281 WNMADNYSNLLNPELSISC-----PFILTLTLVVEDQVKTHSEANLKYMDLE--KKSKTS 333 + +L + + ++ P+ + + + + + ++ + +K +S Sbjct: 254 FLNDRLIKSLTDIGIELAISIHAQPYDVAEAVKKVNTAEAGVKMDMVKSQVSAAQKGISS 313 Query: 334 YAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRK 393 + A E + + + + S + D+ E + I + RK Sbjct: 314 NLAVSSVAQDTADEAEKWKTEINDNDQKMFSGVFLVMVKA-DSAEELADYTSRIKQAGRK 372 Query: 394 NGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP 453 + E ++ + LP K+ ++ + N+A +P + + Sbjct: 373 HVIEFEETYYHQEEALNSMLPIGKTYIDVKR----RFMRDMTTTNIATQIPFTNTDLQSQ 428 Query: 454 AGL--LAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ---PLIRSVLDSGG 508 + L + I + R + + + G+SG+GK+ ++ + + Sbjct: 429 SPLANYYGQNQISNNIISL-DRQRDLYTSSGVILGSSGSGKSVFVKINEVIPAILRFPND 487 Query: 509 FAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANIT-----DIDQS--AERVRDQL 558 ++ D + Y + G +D G FN D D+ ++ + Sbjct: 488 RVIIVDPEEEYVDIGHAFGAQVIDIYPGTKTHFNLMDIPDLNKLRDEDKDFVGQKASLIM 547 Query: 559 SVMASPNGNLDEVHEGLLLQAVRASWLA-KENRARIDDVVDFLKNASDSEQYAESPTIRS 617 + + + + L+ + + + + D D L + E Sbjct: 548 GLFENILQEVTDDDVSLIDRVTHLCYEQITDRTPTLKDWHDILLEQPEEE---------- 597 Query: 618 RLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIY 677 + + + YT F + E ++ + ++V+ L L L M + Y Sbjct: 598 -AQSLALKSESYTKGSQ--DIF-AYETNVDLNNQVVIFNLKKLSG--KLKPFAMMVIQDY 651 Query: 678 IENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 I + DE + + F K Y R++ ITQN+ Sbjct: 652 IWQHVVDHKDEFVTRVYFDEMQNQFETDDQAA--FFSKMYARIRKYGSIPTGITQNVETL 709 Query: 738 DSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFS 797 S R NS + ++LKQ + I K + Sbjct: 710 LS---RKEGRNLLYNSEFLVLLKQKKTTIPYLLK--TINLTDALVRYIE-----KPKAIG 759 Query: 798 SFLLQVENHSSWHRLFVDP--LSRAMYSSDG 826 + L+ + + + ++D Sbjct: 760 TGLIIAGTTTVPFENPIPEDTELFRLVATDA 790 >UniRef50_C8WY82 Type IV secretory pathway VirB4 protein-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY82_ALIAD Length = 659 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 101/668 (15%), Positives = 214/668 (32%), Gaps = 87/668 (13%) Query: 206 IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTAR 265 + + + +R L + + DL AD + + E + + Sbjct: 15 WSWLRAHLRRQKE-----KRVLAQDPSVIGEHAPTLHDLMTLADGIEMRASEIYVSPSGY 69 Query: 266 ILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE----ANL 321 +++ P + ++L + D ++ Sbjct: 70 TKTYYVTGLPSTVHF--------GYFQRFFRVGADVHISLHVEPADSAVAMAKRTKLMTK 121 Query: 322 KYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETAL 381 ++ + K K +++E + + R+ L G+ + + + + E Sbjct: 122 IEAEILAEQKAGTNKQIAFLQQEYQLLEKEREELRLGRERIFYATIILAVSSPNRQEFEA 181 Query: 382 EVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVAN 441 E+ F GF L H F + P + +AN Sbjct: 182 ACERIEREGFE--GFLLREAFKEHDLGFRSVAPIGENA--------LRHPIEMTASALAN 231 Query: 442 LMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPL 499 P G+ L D + N N + G +GAGK+ L++ L Sbjct: 232 SFPFTNARFSHEYGVPIGVDWSSGHLNRYDAWH--PKLVNANGVIIGKAGAGKSFLVKGL 289 Query: 500 IRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPF--------------A 542 + G V+ D Y + + +GGV + + +FNPF Sbjct: 290 VARSAAMGIRHVIVDYEGEYTPMVQALGGVVIRLDEHSPYKFNPFELEEEEEKQADGTIR 349 Query: 543 NITDIDQSAERVRDQLSVMASPNGN---LDEVHEGLLLQAVRASWL-AKENRARIDDVVD 598 D+ + + + MA + LD + ++ + + + + + Sbjct: 350 RFVDVKEKISDMERLIVSMAHLHAGHDLLDSYTRNAINDMLQELYERDFGFTSDPESLYE 409 Query: 599 FLKN---------------------ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQ 637 + + + E SRL+E+ + L ++ GT G Sbjct: 410 RHETWQRDAKGDRLVRRVKRPQPRFSDFYVKLEERAASDSRLEELAMRLRRFREGGTEG- 468 Query: 638 YFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDE 697 F+ D +V +L L ++ + M ++ +I + + +LKK VIDE Sbjct: 469 MFDCYSNVELQDVPVVSFDLSHLPEKSMARLLGMQVVLEWIMEKFIKKNVHLKKRVVIDE 528 Query: 698 GWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKI 757 ++L+ F+E +R R+ +G+ + +Q DF S RA NS KI Sbjct: 529 AQKMLEHL--YHAIFMEDVFRRIRKRSGSAVAASQ---DFRKFAESEQGRAILQNSDTKI 583 Query: 758 ILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPL 817 +L+Q + + + + + + F + +W+ V +++L Sbjct: 584 LLRQDKLDKEAVIENF--GLEEHEFEELIAFRDGQARWW------VGGEVFYNQLIPFAD 635 Query: 818 SRAMYSSD 825 ++++ Sbjct: 636 EFELFTTR 643 >UniRef50_B5UW44 TrsE protein n=1 Tax=Bacillus cereus AH1134 RepID=B5UW44_BACCE Length = 631 Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 93/627 (14%), Positives = 208/627 (33%), Gaps = 66/627 (10%) Query: 231 SDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNL 290 + +++S L + A + R I +A D +N Sbjct: 14 EYIESMMLDNSTFLDIIAPDSIQEHEDYMRLGGNYIRTLAIAHF--------SNDIRANF 65 Query: 291 LNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS--VEKEAKEW 348 L +I+ + + + ++ + + + S K +E K+ Sbjct: 66 LEKLHNINANVSVIHHIEPTPVEGMIKYLDRAAVEYKSQMRDSKLKESEKSVIENRLKDT 125 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 + + L S + + + I N + + + ++ + I+P + Sbjct: 126 MIMIEDLTSSDGVMFNEHMLINIQAP-NVKELNRITHLVKTMISRH-MKAITPNLRMLDA 183 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY--RNQLA 466 F + LP K L + + + +++ L P T G++ N + Sbjct: 184 FNSALPLG------KNLVKELTYRNFSAESLSALFPFDECELFTDKGIIKGKNLKTNSVV 237 Query: 467 FIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENM 526 +D N N V G SG+GK+ + + + D + + + Sbjct: 238 IVD----HDALLNRNEFVVGPSGSGKSTYLWGDMMRRWEQRVKIRSVDPKGEFGYKFKKL 293 Query: 527 GGVYLDGETLR---FNPFANITD---IDQSAE---------RVRDQLSVMASPNGNLDEV 571 GG ++ + NPF I D++ + ++ + ++ +L Sbjct: 294 GGTWVKISPMNDHIMNPFEIIATNIPRDENGQPIAASLLHKKISNLKTMFTLMYNDLKNQ 353 Query: 572 H--EGLLLQAVRASWLAKE-------------NRARIDDVVDFLKNASDSEQYAESPTIR 616 LL +A+ ++ + + + D+ + + E Sbjct: 354 QVALALLEKAIVKTYENFDINWDTDFTKKKPTDYPILGDLYELIGKLIKENSEYEP---- 409 Query: 617 SRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLII 676 L + +L Y G+Y + N ++ ++ ++ L+D L M++++ Sbjct: 410 --LTGLYQVLYPYVE-GSYSRAINGH-TNVDLSNDLIDFDILELKDDKELQKVAMYNILT 465 Query: 677 YIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVD 736 ++E + ++ +DE L D +N EF+ Y+ R G + TQ I D Sbjct: 466 FLEADAIKDLDVVQ--VYVDEAHILSDPRNPLAMEFLSNMYKLVRSFKGGVTSATQQIGD 523 Query: 737 FDSDKASSA--ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQ 794 F S + S A NS K+ L S E + + F ++ ++ A K++ Sbjct: 524 FLSAQEGSKNHGEAVILNSVTKLYLPMSKNELDTIMKKTSETFSEEEQKILIIKDADKEK 583 Query: 795 WFSSFLLQVENHSSWHRLFVDPLSRAM 821 + V + ++ + P + Sbjct: 584 SAGKGVYVVGSAKVSLQVELTPAELEL 610 >UniRef50_B0S4N6 TraE like protein n=1 Tax=Finegoldia magna ATCC 29328 RepID=B0S4N6_FINM2 Length = 938 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 108/761 (14%), Positives = 240/761 (31%), Gaps = 115/761 (15%) Query: 157 HYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG-----E 211 + R FI+Y D+ + +K +++ +++ + ++ + Sbjct: 207 NRRKFITYTV-----LADDLEDATEKLKRAETAIKERLKDIYPINSDDVVKVLSAKERLK 261 Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 + D + + D + F + AD+ + E GR + Sbjct: 262 LFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADFTDKSIFEWGRY---YGQVRFI 318 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 P + + + I ++ + + +T K + + Sbjct: 319 KDIPTEMT--------DEFIQDLTAENINMICSIHINPIPKDETKQMIRTKLSFMNTEKF 370 Query: 332 TSYAKWF------------PSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNET 379 K S+ + +E +++ ++ + I + + Sbjct: 371 GEKRKLSGKGLGASDEFVAQSLIENLEEAKKIQNKIQEENEKMFVTTFCIMTMA-ETLDE 429 Query: 380 ALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV 439 ++ I R +G L + + F T LPF V ++ S ++ Sbjct: 430 LMDNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFGYN--------RLDVSRQLLSKSL 481 Query: 440 ANLMPLVADNPLTPAGLLAPTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ 497 P + P G + + ++ ++ N + + T G+GK+ + Sbjct: 482 GIFEPFSTQDIYQPGGFVYGVNPTSKSIILLN----RLSRKNPSGFIMATPGSGKSMAAK 537 Query: 498 PLIRS-VLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLR---FNPFANITDID----- 548 I + L + V+ D Y +L + G + + NP I+ Sbjct: 538 HEIANIFLSTDDDIVIVDPESEYGTLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKND 597 Query: 549 ---------------QSAERVRDQLSVMASPNGN-----LDEVHEGLLLQAVRASWLAKE 588 + + +++ N N L + R + E Sbjct: 598 FVQNEMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPEEISTIDVVGRKLYKRCE 657 Query: 589 NR---ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 ++ + D L +D + +L Y +G+ F S E + Sbjct: 658 KENRVPTLNLLYDTLVKEADYTS-----------TRLAQVLQIYVNDGSL-NIF-SKESN 704 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT-PRNLKKLNVIDEGWRLLDF 704 + +++ +L + L + ++ + NR+ + + + IDE + +L+ Sbjct: 705 INIKNRVISFDLNSVTQN--LKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLN- 761 Query: 705 KNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGN-SSYKIILKQSA 763 N F+ + ++ +R++ G ITQNI D + AR + N + Y +L QS Sbjct: 762 -NEYSTSFLYQLFKRSRKYDGVITGITQNISDML---RTENARTMFNNATGYVCLLNQSE 817 Query: 764 KEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV--DPLSRAM 821 + A +LY Q+ I K L+ E + + D + Sbjct: 818 DDLATLTELY--GLSKEQQKYIYNASKGKG------LIMTEGVTVPFENIIAKDSKLYKL 869 Query: 822 YSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLE 862 +SD D +++ R E I E +L + + +E Sbjct: 870 TTSDPND---IKRYRAEDEKIKEDFDKLMEEYKDNKSEDIE 907 >UniRef50_Q8GJA2 VirB4 n=1 Tax=Campylobacter jejuni subsp. jejuni 81-176 RepID=Q8GJA2_CAMJJ Length = 822 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 98/807 (12%), Positives = 259/807 (32%), Gaps = 92/807 (11%) Query: 51 QESGLFMNDTTMGFMLEAIPINGAN---ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVG 107 E+ L D + +E I+ + E + L + + I+L+ + Sbjct: 65 DENILVTKDGNLCVGIEIKGISYSGISLEEEISYLQSRTQFFGKISSDIEINLIVKKDRI 124 Query: 108 DRIEYGLREFS-WSGEQAERFNAITRAY---YMKAAATQFPLPEGMNLPLTLRHYRVFIS 163 + ++ + ++ + E++ A+ Y +T G + + Sbjct: 125 ELVKQNSNSKNVFANQIIEKWENHKDAFQITYFLIISTIDKKISGALESFKNKTTKEKEQ 184 Query: 164 YCSPSKKKS-RADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYP 222 + S A + + + + +L + A ++ N ++ + Sbjct: 185 SKEEKESFSFEAKKIIINETLTEAKRALSI--FNPTQITADDILNFYATYSN-AQETKFR 241 Query: 223 KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 +L S + S +++ + DY+ + + + I + Sbjct: 242 YTNELITDSYI-------SSNVEFKKDYILFERNDGKQMFSRFI---SIKAY-------E 284 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVE 342 S++ L S FI+ + + ++ K + + + Sbjct: 285 TDIISSHITTKILRSSSDFIIFMNMQAYEKEKAIKKVK--------------DTGAFAPQ 330 Query: 343 KEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPR 402 E L + + + + +++ ++ +N E ++ ++ Sbjct: 331 IIKDELSGLIEIIKADRENLMLVSFSVYILA-ENLEDLETKTNELKGILANQNLNIVRET 389 Query: 403 FNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYR 462 N + + P A K+ + + +F +++ ++ + Sbjct: 390 INQKALYFSFFPSRANLNARKRTLKVSNLASIANFE-KDVLGFAKNDWGEQPVTIFRHLS 448 Query: 463 NQLAFIDIFFRGMNNT-NYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 + + + + + + G +GAGKT L Q L+ ++ D G + Sbjct: 449 GTPYLFNFHWTDQGDKPSGHTMIIGGTGAGKTTLAQFLMCNLYKYDIDIFSMDKLRGMYN 508 Query: 522 LCENMGGVYL--DGETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQA 579 G Y D + NPFA + ++ +++ + MA N+++ + + Sbjct: 509 FATYTDGEYHDADFSDFKLNPFA-LPYTSENKSFLQNFIQKMA----NIEDTQYNAVNEI 563 Query: 580 ---VRASWLAK--ENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGT 634 + + K E+ + D +D L+ +++ L + + Sbjct: 564 SKTIERLYNNKLEEDIFTLSDFIDSLQYEE---------------NDIKGRLRPFQNS-- 606 Query: 635 YGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNV 694 F++ + +L + ++ +L + + P+L + ++N + + Sbjct: 607 ---IFDNKQDALSFNKQLSILNMDSILKNPTLASLTASYIFHRLKNSA-KNSKKRGFFCF 662 Query: 695 IDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSS 754 IDE L +N + E I + R+ G QN+ FD + N + Sbjct: 663 IDELKDFLMDEN--MRESILESILEVRKIGGVMCMGFQNLSFFDDI---PKGASFLENIA 717 Query: 755 YKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVE--NHSSWHRL 812 II + + + + P + + + G LL++ N S+ + Sbjct: 718 NYIIFPTTNAQTLENMRN-KLNLTPTELKFLQEAGTN----SRQVLLKMNLSNQSAILNI 772 Query: 813 FVDPL--SRAMYSSDGPDFEFVQQKRK 837 + L ++SS + +++ ++ Sbjct: 773 DLSRLGKHLRVFSSSSDNVMLMKELKE 799 >UniRef50_B9EC75 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EC75_MACCJ Length = 657 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 75/659 (11%), Positives = 188/659 (28%), Gaps = 81/659 (12%) Query: 234 NYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNP 293 + Q V+ D V +Y + + ++ + + D S + + Sbjct: 8 DEQIVKQKIDDFVEDNYDLEFIAKTQPQGGISFHENYIKKGDGYEACLTIYDYPSTVYDN 67 Query: 294 ELSISCP---FILTLTLVVEDQVKTHSEANLK--YMDLEKKSKTSYAKWFPSVEKEAKEW 348 + I + ++ + + + A S + + Sbjct: 68 WMRHIVNREGVITVQDISTANREQVQENLKRSLSEQSARIQDNKADAMTKSSSTDKYQTL 127 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 + + + + + + K E I G + F N Sbjct: 128 LGVSHMINDLGEQIKKITVRMFIY-KPTLEQLDNEIHRIRVDLEARGIKSQVMNFETKEN 186 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT-YRNQLAF 467 + + L G+ Q+ + + P + G T + Sbjct: 187 WQS-LVMKYGRQKQVHGVNFKEGQQIPASTLGGGYPFDHTSINDEHGAFIGTTETGGPVY 245 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMG 527 +D+F ++N V G G+GK+ ++ + F FD ++ + G Sbjct: 246 LDLFKVDNVRKSFNSIVFGMMGSGKSTFLKVIEEEQFARNHFIRGFDKAGDFRQVVREQG 305 Query: 528 GVYL--DGETLRFNPFANIT----DIDQSAE----------------RVRDQLSVMASPN 565 G + DG N + D + + + + M+ N Sbjct: 306 GKMISLDGSQGMINMLEILPTATFDKEDNPDIEGYDLVINEEACYTQHLSKLQMQMSLMN 365 Query: 566 GNLDEVHEGLLLQAVRASWL--------------------AKENRARIDDVVDFLKNASD 605 G+L + + ++ E + + F+ N + Sbjct: 366 GDLTDTDLMDCVSYFNDFYIHVGLWTADRSKRKQMVVTGHRPEEYPILSEFRAFIHNLDE 425 Query: 606 SEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL-ELGGLED-R 663 S+ ++ + + ++ LD YG F+ D + +V + LE Sbjct: 426 SKMTSQKRVTKEK---ILTTLDNMIN--VYGGVFDGHTTVPNMDEEQIVFYNIEQLEKLS 480 Query: 664 PSLLVAVMFSLIIYIENRMYRTPRN---------------LKKLNVIDEGWRLLDFKNHK 708 P++ ++ + I ++ + + + + IDE +++ N Sbjct: 481 PNVFKCQLYVALSLIWSQALKNGKKYKKMIEDGKIDPRNARRFMVFIDECQNIVNVNNLN 540 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFD----SDKASSAARAAWGNSSYKIILKQSAK 764 EF+ + R++ I TQ+ ++ A++ + + + YK + Sbjct: 541 TVEFVVNFMKEMRKYLAGVIFATQSPKQLLPENSNNDATTQLKQIFALTQYKFFFQIDRS 600 Query: 765 EFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYS 823 + + + + ++I G + + +++ V +S Sbjct: 601 DIDSVRDVLGETIKESEYEIIPTLGKGEA-----IVSIQGANNTLFHNDVSEEQLRRFS 654 >UniRef50_Q8GCN3 TraE/TrsE family NTPase n=6 Tax=Mycoplasma RepID=Q8GCN3_MYCFE Length = 937 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 103/679 (15%), Positives = 223/679 (32%), Gaps = 84/679 (12%) Query: 176 ILEMENLVKIIRASLQGAS-ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLN 234 + E++ ++ I+ + + + + ++ + N + + + Sbjct: 242 LEELDECYSTFIQKVEDYEVISYEKLSGFELLSFLNKLNHFNKSEEDIETFLNESDIYES 301 Query: 235 YQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPE 294 ++ F + + ++ + L+ + + + + R +L + D ++ Sbjct: 302 EYSLDRLFKYE-KVEFKSNSLKIDDKLYSVKCAGNIPIRLNNE-WLKKLFDVSGTVVWNN 359 Query: 295 LSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQR 354 + P ++ K +AN K MD + ++ ++E+ + + + Sbjct: 360 FPYNDPNVV---------NKIIDKANKKNMDAGNLDNSIINRFGSALEE--ESIAVMIDQ 408 Query: 355 LGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLP 414 + + + + + A +N E + I N F ++ F + F FL Sbjct: 409 IQADNFKLFDSNIFVLAEA-ENAEELKQNNLKIKNGFTRSNFGINDLTFRQFEGFLDM-- 465 Query: 415 FMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRN---QLAFIDIF 471 + K + S N A PL LL ++F Sbjct: 466 -----SNYPLSKLDREYYQITSINNAIGYPLKNLPLNDGNNLLLGNEVGGNDSPIVWNMF 520 Query: 472 FRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL 531 + N+N+ + GTSG GK+ L + ++ S L +G A++ D Y MGG + Sbjct: 521 SLTSSRANHNVMILGTSGMGKSTLTKKILTSSLAAGNIAIIIDPQAEYVKWANKMGGQIV 580 Query: 532 D---GETLRFNPFANITDIDQSAE------------RVRDQLSVMASPNGNLDEVHEGLL 576 D G+ NP + I + + + + +++E+ + +L Sbjct: 581 DLGSGDGTVINPLQVKSFIAREEDDANVNFNTLINNHLLWLEKFFSFIFDDMNEMKKNIL 640 Query: 577 LQAVRASWLAKENR-------------ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 + + + +DD++ +K + + + ++ +M Sbjct: 641 QLEIIKLYQSWGIYRLKEVKELKNDGWPTMDDLIKQMKKFVAPKDHHDKEGYTKKVLDMA 700 Query: 624 VLLD-QYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVA--VMFSLIIYIEN 680 LL+ ++ GT G +N ++ + +VV + L D + A + LI + Sbjct: 701 ELLEGKFGRYGTLGALYNGH-TNINIENDLVVFKTSNLIDTEGSVNARIGIMVLISLVNG 759 Query: 681 RMYRTPRNLKKLN--------------------------VIDEGWRLLDFKNHKVGEFIE 714 ++ N KK IDE + KN +I Sbjct: 760 FIFDNAFNNKKRINEYKEKNKIRLISKKEIQKLTRYCSFCIDEEHLYISEKNITTLNYIS 819 Query: 715 KGYRTARRHTGAYITITQNIVDFDSDKA-SSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 + R+ I TQN D+ S A A+ GN Y L + +LY Sbjct: 820 DTTKLVRKLDCGTIHTTQNPSDYASSTAVEQIAKKITGNCQYSFFLGLVGDDIEAVKKLY 879 Query: 774 PDQFLPLQRDMIGKFGAAK 792 PL + + Sbjct: 880 KTAEAPLLDSEVKFISGRR 898 >UniRef50_B9NX71 Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NX71_9RHOB Length = 801 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 121/865 (13%), Positives = 242/865 (27%), Gaps = 124/865 (14%) Query: 39 QFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCI 98 QFS +L + L D + E G + +E P + + Sbjct: 16 QFSDVLNWSGLLAPGILGCKDGSFVCGWEV---TGLDTESLE----------PEEMQV-- 60 Query: 99 HLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 R+E FS G++ + + R + P P L + Sbjct: 61 ----------RLEQLAHGFSGFGDEECFWIQLDRRPFAGLQQNGDPSP-YPALNILEAEA 109 Query: 159 RVFISYCSPSKKKSRADILEME--NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHN 216 R +S + + + + + + L+G + +TV + + +V + Sbjct: 110 RSLLSADGTLYENTIHLLYQWRPADPGIPLEQGLEGFAQACRTV--EIRLGMVFGLRRLG 167 Query: 217 PDSLYPKRRQLDPYSDLN------------YQCVEDSFDLKVRADYLTLGLRENGRNSTA 264 + R++D + +L + + +L + + + Sbjct: 168 LQTEEDLDRRVDRFDELAGLLASALTGSVQRFRIPRNLQYMFLDKWLGVDFERDPESGLP 227 Query: 265 RILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYM 324 RI +L + F T L Sbjct: 228 RIEGCPAVILTLEGVPKACPR---GVLEVLETYGLEFRWTTRLSSMSPRTARKHLRKDEK 284 Query: 325 DLEKKSKTSYAKWFPS--------VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCK-- 374 + + A+ E+ A E+ + G +V Y +T Sbjct: 285 VWAQNAADPVAQIVDGGGGRRDRYAEEMALGAEEMATDVNRG-EAVGMYLSTLTLIGGRY 343 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 E ++I GF++ R + +L LP A + L Sbjct: 344 TTPEELQAAAEEIEAVLVNAGFKVRYEREAALELYLASLPGHAHRVLRD--------TMM 395 Query: 435 ESFNVANLMPLVADNPL------------TPAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 + L+PL +PA A + +L ++ + + Sbjct: 396 PVSDFVELIPLRTSWKGEVHNPSPLFPSNSPALTWARSMTGELFHFNLHVDDV----GHT 451 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDGETL---RF 538 + G +G GK+ L+ L L + FD G + L G + Sbjct: 452 FMFGPTGGGKSVLLGLLSAHWLKYPDARVIYFDKGYSSRHLVNVFEGSFTSFGGETGRGV 511 Query: 539 NPFANITDIDQSAERVRDQLSVMASPNG-NLDEVHEGLLLQAVRASWLAKENRARIDDVV 597 P ++ ++ E D + MA +G +L + + + + ++ Sbjct: 512 APLMHLRELG--LEWGVDWVGEMAKLSGVSLTPALRDEIRAGLSNALKT--GFLTLSELQ 567 Query: 598 DFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLEL 657 +L+N E+ + +++ NG G D+ D + V E+ Sbjct: 568 TYLQNP-----------------ELQSAIRRFSRNGGSGL--LDDDDVSLDWENLTVFEV 608 Query: 658 GGL-EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 L + + + + + +E R L V+DE L I + Sbjct: 609 DELFQQNEDMALLALDYIFAQVERRF----DGKPTLLVLDEAHAFLGHS--IFASRIRRW 662 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQ-LYPD 775 + ARR + TQ++ D S A + +I L K + Sbjct: 663 LKEARRSNVTVLMATQSLSDLT---MSDLADVLLESCQTQIFLPNPKARTEKVRKQYLTL 719 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQK 835 Q D+I +D + L++ L + + Q Sbjct: 720 GMTKAQIDLIASLTPKRDYY----LVKPSGQRVVEFLLGPLALSLLGKTSKEQSILAGQL 775 Query: 836 RKEGLSI-HEAVWQLAWKKSGPEMA 859 KE E V + + + + Sbjct: 776 HKESPDYWREEVQDILDRHYQGDSS 800 >UniRef50_D0RX90 PrgJ n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=D0RX90_9STRE Length = 795 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 101/783 (12%), Positives = 252/783 (32%), Gaps = 102/783 (13%) Query: 77 SIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYM 136 I+++ L + L G + +++ ++ + L E + N I R Y Sbjct: 79 DIIDSYGEALNS-LDAGDNFQLLVINRRVDNQTVRKVLYEPAGD------CNDIYRDEYN 131 Query: 137 KAAATQFPLPEGMNLPLTLRHYRV--FISYCSPSKKKSRADILEMENLVKIIRASLQGAS 194 +F L ++++V +I+ + + +K+ AD +++ + ++ LQ + Sbjct: 132 DIIQERFSLD--------AKNFKVEKYITLATEAYEKNLADT-QLQEMGTLVENELQAMN 182 Query: 195 ITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG 254 I+ + + + I ++ P Y + V + ++ +++ + Sbjct: 183 ISLKKLSGIERLGIFNFLLRQQPYFAYTYKDIALSGLAAKNFIVPN--RIEFHENFMKID 240 Query: 255 LRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK 314 + ++ P L+ I +++ + + + Sbjct: 241 GQ--------FAKVLYVRDYPNFLS--------DKLIKSFCDIGIELAVSIHVAPRELGE 284 Query: 315 THSEANL-----KYMDLEKKSKTSYAKWFPSVEKEAKEWGE------LRQRLGSGQSSVV 363 E + + + + + P + + + ++ + + Sbjct: 285 VGKELSNEQSVAQEEMVRSQKEGFQVGIDPGLAVSGRAVEASETTQKWKDKV-NEDQKIF 343 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFK 423 + + + F D+ E + + + + RK G +L ++ T LP K Sbjct: 344 NGVITVY-FVADSLEELQQSTKKVQAAGRKLGVDLEETYYHQENGLNTILPIGKPFLEVK 402 Query: 424 QLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLA-FIDIFFRGMNNTNYNM 482 + ++ + NV +P + + + +NQL+ + R + N Sbjct: 403 K----EFMRPFTTSNVVTQVPFTNVDLQSDSQRALYYGQNQLSKNLITLDRQRDLNAANG 458 Query: 483 AVCGTSGAGKTGLIQP---LIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGET---L 536 + GT+G+GK + + + ++ D + Y + E GG ++ Sbjct: 459 LIIGTTGSGKGMTTKTTEVIPAYLKYLKDRFIIVDPENEYTDIAEAFGGQVINLSPKSDS 518 Query: 537 RFNPF-----------ANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWL 585 N N +ID A++ +++ S + + G++ + + + Sbjct: 519 HINLMGLTQTDQVLFNENDEEIDSVADKANLLMALFESILKEVTDEDIGIIDRVTKLVYE 578 Query: 586 AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPS 645 + + + D D L + ++ + Y F S + + Sbjct: 579 -RYSEPTLADWHDILLEQPE-----------DAAQQLATRSEPYAKGSL--NLF-SYKTN 623 Query: 646 LRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK 705 + D ++VV L GL L + L +I ++ + DE L F+ Sbjct: 624 VNLDNRLVVFNLKGL--DKKLKPFALLVLQDFIWQQVIKYQGKETIRLYWDELH--LTFR 679 Query: 706 NHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKE 765 N F + + R++ ITQN A R N+ + I+LK ++ Sbjct: 680 NQTDAAFFAELWARIRKYGAIPTGITQNPGTIL---AWEEGRNLMSNTEFFILLKMREQD 736 Query: 766 FAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS--RAMYS 823 + + M+ K++ L+ + + + Sbjct: 737 IEALRDVV-----DIPDAMLRYIKRPKEKGSG--LILAGETVVPFENKIPKETKLYELTQ 789 Query: 824 SDG 826 +D Sbjct: 790 TDA 792 >UniRef50_O87213 TrsE protein (TraE) n=11 Tax=Lactobacillales RepID=O87213_9LACT Length = 672 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 90/659 (13%), Positives = 204/659 (30%), Gaps = 85/659 (12%) Query: 212 MINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHL 271 +++ + K+ D + F + Y+ G + + Sbjct: 22 IVDEEQEQKKSKQDNFMESIDRDSLHSLFPFSWEQYPTYVQSGEN--------FMRTIAI 73 Query: 272 ARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 A P+ + N L+ + + + + E + Sbjct: 74 ADYPKRVY--------GNWLSELKRKKGSIDIVQYIDSASNNSMITYYKKTIQNKEAQLL 125 Query: 332 TSYAKWFPS-VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 ++ + ++ + ++ V + + D+ ++ +++ N+ Sbjct: 126 NTFDPYKQKVLKNYIDSANMQLDKYLDNSTTFVYQHMLVYLRA-DSLAELDDLTENVRNT 184 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 K + + P + F + +P KE+ + +++ P Sbjct: 185 LIKLQMKPLIPVKATFQGFWSTMPINENLLGDYTYKESN------TEVASSMFPFDDAEI 238 Query: 451 LT---PAGLLAPT-YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS 506 L + + N + ID+ R N NM V GTSG GKT + I Sbjct: 239 LDLKPRSDIEGINKDTNSIIAIDMLDR-NTTLNQNMVVIGTSGVGKTTYMIQKILRYAIQ 297 Query: 507 GGFAVVFDMGDGYKSLCENMGGVYLDGE---TLRFNPFANITDI---------------D 548 + D + Y + E++GG L + NP ++ Sbjct: 298 DYQIYIIDPENEYTRIVESLGGSVLHLTSNAKYKINPLQIFSEEILSADEAVTNLDELVK 357 Query: 549 QSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE-------------NRARIDD 595 +R++ V+ ++ +V + ++ V+ +++ + + Sbjct: 358 DKIQRLKGFFEVL---KDDMTQVEKAVMDNIVKNAYINSGILKYNRLNEIKNEQWPTLSN 414 Query: 596 VVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVL 655 V D L S+ + P + + +L YT F+ ++ D K+V Sbjct: 415 VYDELTKLSE-----KDPEKFKTIKDFYFILGSYTHGSN--TLFDG-ATNINLDTKIVSF 466 Query: 656 ELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEK 715 +L L+ + + Y+ + + + + KKL V DE L K+ F + Sbjct: 467 DLKPLQSEQEVQAGAYLNTFQYLWDEITKDRKKRKKLFV-DEFHFLTLHKSAST--FFHQ 523 Query: 716 GYRTARRHTGAYITITQNIVDFD---SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQL 772 Y+ R++ I TQ I D +D + A GNS K+ K Sbjct: 524 AYKRFRKYNAGAIAGTQQIQDVIEGQTDSGQNIGEAIIGNSFTKVFFGLDGKGVDDITSK 583 Query: 773 YPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEF 831 F ++ ++ + L+ + ++ + + + D ++ Sbjct: 584 LRMNFSEKEKKLLE------RRRQGDALIIYGSQRAFMNVELTEEELRLI--DPEAYKE 634 >UniRef50_B1Z654 Type IV secretory pathway VirB4 components-like protein n=10 Tax=Burkholderiaceae RepID=B1Z654_BURA4 Length = 825 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 113/853 (13%), Positives = 239/853 (28%), Gaps = 117/853 (13%) Query: 45 PYRDYNQESGLFMNDTTMG--FMLEAIPINGANESIV----EALDHM---LRTKLPRGIP 95 P+ + D ++ F + I + N++ + + LDH ++ Sbjct: 16 PWATMVTPELVLDKDGSLLTVFTFDGIDADSPNKADISAARDNLDHACKNFDHRVTAWWR 75 Query: 96 LC-------IHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEG 148 L I S + +RI+ R SG+ +++ AY + + Sbjct: 76 LSHRRVRGDIQGGFSSRIDERIDAINRAHVSSGKFFRNTHSLALAYTPETGINKIFEKVA 135 Query: 149 MNLPLTLRHYRVFISYCSPSKKKSRA----DILEMENLVKIIRASLQGASITTQTVDAQA 204 ++ + + V + +R+ D+ + + +K + + + Sbjct: 136 YHMTVGGKSVPVALWETLRDVLFARSAFAFDMERITSDIKRFEGVIDAFKGGVTRLKMKR 195 Query: 205 F-IDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNST 263 + V ++ + P RR P + L+ E Sbjct: 196 LQLQNVMAFLHQTANPSVPPRRVRYPVTMLDTHLTE---------------TFVTYGTEH 240 Query: 264 ARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKY 323 + + R +I + L+ + + + K Sbjct: 241 LMFESAYGKRYAKIVSVKEWMGFQEAALDVLADVDAELDICVMFRFLSSHKARVYIEKMR 300 Query: 324 MDLEKKS-------KTSYAKWFPSVEKE--------AKEWGELRQRLGSGQSSVVSYFLN 368 + + K+ ++K ++ A+E +L + + ++ Sbjct: 301 KFYKVAAFNPLAILKSFFSKDEKQEAEKNDKGREILAEEAENALAKLVADGTQYGFANIS 360 Query: 369 ITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEA 428 + + D E + ++++ GF +I N + T LP + Q E Sbjct: 361 VVVY-GDTVEECDDNTREVVGRIGNAGFGVILETRNIPAAWATTLPGRWDQQKRLQFVET 419 Query: 429 GVVQRAESFNVANLMPLVADNPLTP--------------AGLLAPTYRNQLAFIDIFFRG 474 V+++ PL +P + PT L + + G Sbjct: 420 PC--------VSDIAPLRGVEEGSPINQWLTQQTGEQTGPLTVLPTRHRTLQRVTLHQPG 471 Query: 475 MNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD-- 532 + V G GAGKT + L+ + FD + G ++D Sbjct: 472 GK---SHTLVVGPIGAGKTIFLNFLVSQSGRHNPRRIKFDKNRSTRIPTVMANGRFVDAT 528 Query: 533 ---GETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKEN 589 G NP + + D + + + + + QAV + + Sbjct: 529 GRFGAATPVNPLSLLADKRHWTYVAEWVQMAIEDEDFHCTPQQQTDIYQAVATLGGGEYD 588 Query: 590 R--ARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLR 647 R + + L E+ L +T G++F+ E + Sbjct: 589 RELWTLSMLNTLLPM------------------ELRERLQIWTQGEKNGRFFDHVEDAFS 630 Query: 648 DDAKMVVLELGGL-EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKN 706 + +E+G L E P M I + ++E F+ Sbjct: 631 LSDDI-AIEMGDLFEKYPVAAALFMDYAFYRISQ---WLDGKRFTIIEVEECGFF--FQY 684 Query: 707 HKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEF 766 + +E T R G + TQ++ K + N L Sbjct: 685 ERFYARLELWAVTIRGLNGTLVMATQSLGQLARVKNFEILK---ENIPNFFFLPNRDARN 741 Query: 767 AKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDG 826 K+ DMI +D L +H+ + + A+ +DG Sbjct: 742 NKHLYRDVFGLTDDLIDMIADAVPNRDY-----LWVTPDHARMLQAQFPKEALAVLRADG 796 Query: 827 PDFEFVQQKRKEG 839 + + G Sbjct: 797 AAQRVLDKHHDSG 809 >UniRef50_Q1ZJS6 Putative uncharacterized protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZJS6_PHOAS Length = 971 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 113/914 (12%), Positives = 269/914 (29%), Gaps = 127/914 (13%) Query: 38 PQFSRLLPYRDYNQESGLFMNDT--TMGFMLEA--IPING-ANESIVEALDHMLRT---- 88 F+ LL +Y +S F + +L IP G +++ +VE + ++ Sbjct: 47 YSFADLLSIGEYMPDSKTFELRDLRSHAVVLNITSIPTEGRSDDELVELREAVINAFSNT 106 Query: 89 -KLPRGIPLCIHLMSSQ---------LVGDRIEYGLREFSWSGEQAERFNAITRAYYMKA 138 LP P + + + IE +R+ +++ + Sbjct: 107 FALPTQTPFIMQTYAYKEDNLTEFFKRTESFIEPDIRDTAYTQKYLSMMKKHMNGISKPG 166 Query: 139 AATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQ 198 + + ++ I +K ++ NL + + + + + Sbjct: 167 GIFYDEMVTKSQYRGQQKKVKIIIYRHISGTEKGIDAAEQINNLTENFISQISSTGVAVE 226 Query: 199 TVDAQAFIDIVGEMINHNP---DSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLG- 254 + + F D + N P + + +L Y + Q + S V Sbjct: 227 RDNGEKFQDWLVSWFNPKPPITNGDISQLHELAQYPAEDKQPLNYSISENVVYSQPISDP 286 Query: 255 ---LRENGRNSTARILNFHLARNPEIAFL-WNMADNYSNLLNP---ELSISCPFILTLTL 307 I L + P++ + ++ S+ + T+ Sbjct: 287 DEKCWYFDGVPHQYIRVATLQQQPKVGQITGEISKGIGKASQSTALIDSLPDGAMWHQTI 346 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQ--SSVVSY 365 ++ D+ ++ E+ ++ + S + + Sbjct: 347 ILCDENDVDNKV-----------IGLKGVGKSETEESIAAEKAIQSLVESREVGTKHYLA 395 Query: 366 FLNITAFCKDNNE------TALEVEQDILNSFRKNGFELI--SPRFNHMRNFLTCLPFMA 417 + + E T + NG + + +++ LP Sbjct: 396 SMGMFVRADVTVEPSEYMSTLKRNRDKVTQLLLSNGLRPMNIEADAVQVDSYIPHLPMNY 455 Query: 418 GKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTP-AGLLAPTYRNQLAFIDIFFRGMN 476 G+ A+ + NL+P+ T G++ + D+F + Sbjct: 456 ALKDDPYGVYMGLYFDAD---IVNLLPIWGREVGTGNPGMINANRGGEPQTFDMFGKDKV 512 Query: 477 NTNYNMAVCGTSGAGKTGLIQPLIRSVLD-SGGFAVVFDMGDGYKSLCENMGGVYLDGET 535 + + + G G+GK+ + + +V+ + + G+ ++ L + L + Sbjct: 513 R-SSHGVLIGPQGSGKSATLVSIAEAVMAVYRPRLTILEKGNSFRLLGDYFKRYGLSVQR 571 Query: 536 LR---------FNP-------FANITDIDQ----------------------SAERVRDQ 557 + F P F ++ E + + Sbjct: 572 IALGSRRQRAYFCPYLESHLIFDERYTEEEIEWDEHDEIDEEELEEEDDDSAKREPLTEM 631 Query: 558 LSVMA--------SPNGNLDEVHEGLLLQAVRASWLAK---ENRARIDDVVDFLKNASDS 606 L+ L E H+ + +A+ + + + DV L+ + Sbjct: 632 LTATIIMVSGGNPELAKQLTETHKAMFSEAITLAAERSLQLKQQTITSDVCTALQEVIER 691 Query: 607 EQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSL 666 + +S +++ + + LD +T G G+ FN + DD + +L++G + Sbjct: 692 SEVQDS--VKAEMRNYLKALDGWTK-GDRGRLFNQRGKTFDDDVDVTILDIGQYDAEAKA 748 Query: 667 --LVAVMFSLIIYIENRMYR-TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRH 723 L + +L ++ N R + + DE + ++ + R+ Sbjct: 749 AELSVIYIALSTHLFNIGERYQNSGRDTVYLQDETHVF--TDKPLLAPYMATAVKLMRKI 806 Query: 724 TGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRD 783 + TQN+ DF + A + I+L S E + Q+ Sbjct: 807 GLKALYATQNVSDFKNG-----AEKILKLVEWWILLNPSEVEVEEA--GVYRTLTNAQKS 859 Query: 784 MIGKFGAAKDQWFSSFLLQVEN---HSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL 840 MI + ++ ++ R A ++ + +Q R + Sbjct: 860 MILS-TTKQKSAYTEGIVMGNKKVVGEMLTRFVPPSEQLARAMTEPEEKAERKQLRDQYG 918 Query: 841 --SIHEAVWQLAWK 852 EA +A++ Sbjct: 919 FNDDIEASEFIAYR 932 >UniRef50_C7LKR7 Putative membrane protein n=3 Tax=Mycoplasma RepID=C7LKR7_MYCML Length = 947 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 101/651 (15%), Positives = 213/651 (32%), Gaps = 72/651 (11%) Query: 166 SPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGE---MINHNPDSLYP 222 + ++ ++EN + + Q + + F+ + E +I +L Sbjct: 277 VDQELANQYLKQQLENKRQ--VSGYQNQEFKYENNSFKEFLSFLKEQLKLIFSKNKNLKI 334 Query: 223 KRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWN 282 + + + + + +Y + ++ P Sbjct: 335 INNNKTENQKIRLDELISNKKIVFKHNYFICD--------DKFVSIHTVSDLPLTLPEAW 386 Query: 283 MADNYSNLLNPELSISCPFILTLTLVVED---QVKTHSEANLKYMDLEKKSKTSYAKWFP 339 + ++ L + D Q ++N K D K++Y K Sbjct: 387 AIPIF----------DSDSMIVWNLGIFDENTQASLLDKSNKKETDNSTLLKSNYFKKAS 436 Query: 340 SVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI 399 S+ + + L +L ++ + + L I DN + ++EQ L + +++ + Sbjct: 437 SI--QLQALEYLENQLQVDKNVLTNSSLMIINVA-DNLKDLRKLEQKNLLNAKRSKININ 493 Query: 400 SPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP 459 F + S+NV++ P +N + Sbjct: 494 PIPFKQFEGL--------AQASLITTNNLKESVAMSSYNVSHGWPFQNENNNDNNMFILG 545 Query: 460 --TYRNQLAFIDIFFRGM-NNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMG 516 + + F++ TNYNM G+SG GK+ ++ I S L V D Sbjct: 546 ESDSTGEPIIFNQFYKNNSRRTNYNMFTVGSSGKGKSTDVKKAIVSNLAQNNKVYVIDPQ 605 Query: 517 DGYKSLCENMGGVYLD---GETLRFNPFAN---ITDIDQSA-------ERVRDQLSVMAS 563 + Y L G +D G NP + + DQ + + + + Sbjct: 606 NEYAKLGHKFGATIIDLGSGYNTTINPLQVQIQLFEEDQKLSIDSIINKHLEWIETFFSL 665 Query: 564 PNGNLDEVHEGLLLQAVRASWLAKE-------------NRARIDDVVDFLKNASDSEQYA 610 N + ++ L+++ V+ + K N I D++ ++N +++ Sbjct: 666 INPDWNQDQLVLVMEFVKELYKNKGLYKLRAYKSLESFNYPIISDLIKLMRNYKFVDEFE 725 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLL-VA 669 E + + + L + NG Y +N+ + ++ ++ L + S Sbjct: 726 EQRKKLTLANIIDRLSYNFEYNGKYHHIYNA-QTNIDLSNDFIIFNTQKLFNTSSSNGKV 784 Query: 670 VMFSLIIYIENRMYRTP---RNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 +F L+ +I+N+++ N + VIDE +D N +F+ +T R+ Sbjct: 785 GLFVLLSFIQNKIFNNAIEFANTNTVLVIDELHMYIDPNNPATLDFVYSMTKTVRKFNAG 844 Query: 727 YITITQNIVDFD-SDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQ 776 I TQN DF S + A A N Y K+ ++ Sbjct: 845 MILCTQNPSDFLGSSMITKKAEAILQNCQYAKFFGLKQKDLEAVIDMFKSS 895 >UniRef50_Q6MU50 Transfer complex protein TrsE n=2 Tax=Mycoplasma mycoides group RepID=Q6MU50_MYCMS Length = 814 Score = 240 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 112/768 (14%), Positives = 256/768 (33%), Gaps = 82/768 (10%) Query: 76 ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYY 135 E L H L +M+ + L + ++ + ++ Sbjct: 49 EENQRRLTHFFNLFKFLKSNLSFVIMNKIINIKDYLNILNKQIKDIKKDTLSKKVKKSKI 108 Query: 136 MKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 T L + + + Y VF ++ E+ + L + Sbjct: 109 QTIYETIDILSSREDKEILTKKYYVFY---------YNKNLEELNLDTIFLHEHLLNTGL 159 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + ++ + ++ ++I + + K+ + ++NYQ +E + L+ + L+ Sbjct: 160 NCKQLEFYEILTVLKDIIEPSTNDFNEKQ-----FENINYQDIEIADVLE--PNKLSFTS 212 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 N + + R P + ++ + + + D + Sbjct: 213 DSYKTNKNIILNISVVDRYP----------LFPERFWALDLVNTDSTVIIKISQNDAKEF 262 Query: 316 HSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLG-SGQSSVVSYFLNITAFCK 374 N ++E + + + + + E L + S + +NI + Sbjct: 263 TRNLNRAIENIELQKRDIKKRNVVEISAKEVEINNLLNLVSLINDSKEIIKNVNIYLITR 322 Query: 375 DNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRA 434 N+ + + I +GF L + F + F + P Sbjct: 323 TNSFHLKKTLKLIEKDINIDGFSLNNLTFRQLDAFKSMFP------RTDDELSENFRIET 376 Query: 435 ESFNVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFR---GMNNTNYNMAVCGTSGA 490 + ++ P V + G+L +L + F + N N + SG+ Sbjct: 377 TTSTLSESYPFVNQALIQNKGVLLGKNNLGELIIWNPFENLEQNSSFLNANTTIIAKSGS 436 Query: 491 GKTGLIQPLIRSVLDSG-GFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI-- 544 GKT + ++ + D + Y LC G +++ G R NP + Sbjct: 437 GKTASTLAIADRLISQNKTKMMFIDPDNDYLKLCSKYNGKHINLGSGFESRINPLQILYH 496 Query: 545 ------------------TDIDQSAERVRDQLSVMASPNGNLDEVHE--GLLLQAVRASW 584 I+ + + + ++ + ++ +E +L+ +++ + Sbjct: 497 LKDETKKNKSHLKGESDVKLINSNEVVISNHIAFLEHFFDIINPNYEINRYILKMIKSLY 556 Query: 585 ------------LAKENRARIDDVVDFLKNAS-DSEQYAESPTIRSRLDEMIVLLDQYTA 631 L + I+D+++ + D ++ E + + L D++T Sbjct: 557 TRWDFISKDLFNLKTTDWPTINDLINEFYDFKKDRKKEDEYVNEAMWNNALEFLKDEFTG 616 Query: 632 NGTYGQYFNSDEPSLRDDAKMVVLELGGL--EDRPSLLVAVMFSLIIYIENRMYRTPR-- 687 G +N D++++V ++ L + ++ A + L + +N + Sbjct: 617 FGKLSHLYNGHSTLNTQDSEVIVFDIKTLIESNNFKIIQAQIMLLTAFTQNEFELNSKLS 676 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAAR 747 N + VIDE L+D +N EFI+K + R+ G ITQNI DF + + +R Sbjct: 677 NKNTILVIDEAHLLIDAQNPIALEFIKKTTKRVRKKRGGIWLITQNINDFSDPRILAQSR 736 Query: 748 AAWGNSSYKIILKQSAKEFAKYNQLYPDQ--FLPLQRDMIGKFGAAKD 793 A N YK+ L+ ++E K +L ++ Q++ + + Sbjct: 737 AILSNMQYKLFLQMDSEEIEKLAELLINEGGLTQSQKEFLLFCEKGQG 784 >UniRef50_C9C8C6 Tra protein n=5 Tax=Enterococcus faecium RepID=C9C8C6_ENTFC Length = 651 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 86/634 (13%), Positives = 192/634 (30%), Gaps = 88/634 (13%) Query: 231 SDLNYQCVEDSFDLKVRADYLTLGLRENGR----NSTARILNFHLARNPEIAFLWNMADN 286 L V + +DL++ Y G + + + + E D Sbjct: 5 KKLARNLVSEGYDLRLVEKYQPSGGIKFDERYISTGDGYVTSIAVIEFAE--------DV 56 Query: 287 YSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS-KTSYAKWFPSVEKEA 345 S L ++I I T + D+ + N +L+ +S + + Sbjct: 57 NSRWLTDIMAIP-NTIATFDVCTADKEDLLHKINTSIGELDYRSTNENRTTDKTDALLDK 115 Query: 346 KEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNH 405 + Q + V + I + D+ E + +I + I P+F Sbjct: 116 YNLEDFAQEITKRGEVVKTVHARIFVYS-DSLEELEKRISEIRKDLASVNHKAIVPQFRM 174 Query: 406 MRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPT-YRNQ 464 +++ + A + N+ +P + P G T Sbjct: 175 KDEWMSLF---QDGMEQESKLFAKKGLTVPAKNIGGGIPFHHKSLKDPRGFYLGTTSTGG 231 Query: 465 LAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCE 524 D F+ ++N + G G GK+ LI+ L + F FD ++ + + Sbjct: 232 AFIFDPFYSTKQRRSFNGFILGKMGFGKSTLIKQLQEGLQAKNCFIRGFDKSGEFEGMVK 291 Query: 525 NMGGVYLD--GETLRFNPFANITDIDQSAER----------VRDQLSVMASPNGNLDEV- 571 GGVY+D G + NP + + + ++ ++ ++ L+ Sbjct: 292 KAGGVYVDLGGGDMVVNPLQIYATVMKKDQFGNDVVDESKSFQNHITKCSNQIRFLEPEI 351 Query: 572 ------HEGLLLQ-------AVRASWLAKEN------------------RARIDDVVDFL 600 L+LQ + W + + + F+ Sbjct: 352 DTATVREYTLMLQDFYIHYGILPKEWREARDDNERNQLNTNICNLPNDSYPIYGEFLKFI 411 Query: 601 KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD-AKMVVLELGG 659 +N + A +RS ++ + +++ TY Q FN D K+V + Sbjct: 412 ENQQFKIKNATPERVRS-IELIKLIVTDMCT--TYPQIFNGVTTMPNFDTTKIVYYNIDS 468 Query: 660 LEDRPS-LLVAVMFSLIIYIENRMYRTPRNLK----------------KLNVIDEGWRLL 702 + + + +F+ + I N + + K + +IDE ++ Sbjct: 469 ISKMSAPVFHCQLFTALTTIWNSALQNGKIQKENFKKYGSDYYKYAQDFMVLIDECHNVI 528 Query: 703 DFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDS----DKASSAARAAWGNSSYKII 758 + N E++ R R+ TQ + + + R + ++K Sbjct: 529 NSNNKYACEYVLSFEREMRKMRAGVYFATQTPEEIIPKDSGSEVADVIRNIFNLCTFKCF 588 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAK 792 + ++ + + ++ + + Sbjct: 589 FNLDSALLEDIKKVLGNTITDTEIMLLPELEVGQ 622 >UniRef50_O25189 VirB4 homolog n=5 Tax=Helicobacter pylori RepID=O25189_HELPY Length = 807 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 103/670 (15%), Positives = 210/670 (31%), Gaps = 72/670 (10%) Query: 179 MENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCV 238 + +++ ++ L + + +DA + ++ E IN P R L+ + Sbjct: 185 LYSIINNVKNMLS--GLFVEKIDANSLLNFYAEYINGVPSEYTFARG------RLHDGMI 236 Query: 239 EDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 K NG+ R ++ +++ S L+ L +S Sbjct: 237 NSDVHFKKD----FFTHIHNGKEIFKRFISIK---------TYDIDKIVSTALSSVLHLS 283 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSG 358 F + L + + K K K + E EL + + Sbjct: 284 LEFDVILNIDNIPKAKAEKRIETKRKRANKSIR--------------VEIDELNDMIKTD 329 Query: 359 QSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAG 418 + + LNI K +I N ++ G + F + P Sbjct: 330 RVLMQEISLNILVHAK-TKTDLDSACIEITNLLKQKGIVSTQESIGMLPMFFSFFPNRNR 388 Query: 419 KGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNT 478 K+L + + N ++ + + Sbjct: 389 LNFRKRLLSSQNIASLIILEKQN-CGFSRNSWGDRHLTIFRNQDKSPYLFNFHAYEAKRK 447 Query: 479 N----YNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKSLCENMGGVYLDG 533 N + + G +GAGKT LI+ LI + + D +G + + E + G Y D Sbjct: 448 NDMVSGHTIIFGGTGAGKTTLIEFLITNCFKYEDLSILALDRNNGMRVMTEFLDGQYNDS 507 Query: 534 ETLRFNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARI 593 NPF+ + D + + L+ M + + + + E L A+ + N I Sbjct: 508 NDFYINPFS-LKDTSANCTFLVSWLAFMLNIDEDTKDEKEKKTLSALSKTIRVCYNN--I 564 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 + D + E + S+ +L++ ++ Y L K+ Sbjct: 565 TKQGGAIFKLRDFKDTLEIDYLDSK-----DILEKESSKDLYKH----STDCLDFAKKLS 615 Query: 654 VLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI 713 V+++ L + L + NR + IDE ++ +N + I Sbjct: 616 VIDMDALSSSKKDFNLAVLYLFYKVMNRAKLENK--PFYIFIDEAKSVI--ENPIMLAKI 671 Query: 714 EKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLY 773 + AR+ G Q+I D + A++ N++ I+ + E + Y Sbjct: 672 KDTLAQARKLNGVLTLAFQDINQLDGVEG---AKSIIENAAQVILYPTNNFEK---LESY 725 Query: 774 PDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS------RAMYSSDGP 827 P+++ + K Q LL S + + ++ L+ Y+S Sbjct: 726 GILLSPIEKSFLNKTPLNARQVLVKNLLTQ--SSVFLEINLEKLNSTSKKFLRAYNSSAS 783 Query: 828 DFEFVQQKRK 837 ++ +K Sbjct: 784 SVFELETLKK 793 >UniRef50_B2JXW2 CagE TrbE VirB component of type IV transporter system n=1 Tax=Burkholderia phymatum STM815 RepID=B2JXW2_BURP8 Length = 857 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 100/823 (12%), Positives = 223/823 (27%), Gaps = 122/823 (14%) Query: 95 PLCIHLMSSQLVGDRIEYGLREFSWSGEQAE--------RFNAITRAYYMKAAATQFPLP 146 + + ++++ + + S G A + + F Sbjct: 49 GVPFEVFENKVLDRKFDRDTEILSKLGRDHGGRLGYHGVFMRRRVNADHEYRFDSPFMNW 108 Query: 147 -------EGMNLPLTLRHYRVFISYCSPSKKK--------SRADILEMENLVKIIRASLQ 191 + Y I + ++ + + + + A + Sbjct: 109 FSTQHGGQFRGGRFFGNRYYFSIILKYEDFEDGLKEIASLAQQALQQFADYEAELLAVYE 168 Query: 192 GASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYL 251 + + V ++N L +Y Sbjct: 169 RTHMNGTKMLFSQLYGFVSYLVNGVTGDLPVAAEPGVDVIPSSYLRFGYDTHAIDGP--- 225 Query: 252 TLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVED 311 + L PE L+P LS+ F + + Sbjct: 226 ------GVPDHRRFFTCRDLRSFPEKPGFGQ--------LDPLLSLPIEFTVVHSFNCMT 271 Query: 312 QVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 +++ + LE + + +E + + + +G+ S Y Sbjct: 272 GFESNRTIDSAINKLESAGD--------KAKHQVRELRDAQGYVNTGELSFGEYHGAAVI 323 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 + E S + G + + + + +P K Sbjct: 324 YGASTQEALENGILFASRSLNECGVDWALATGSAPFTYFSQVPGA---------KVKPRP 374 Query: 432 QRAESFNVANLMPLV--------ADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTN---- 479 + S N A++ + + ++ + + + + N Sbjct: 375 KVQSSRNFASMFTCHDYSAGKAEGNPIGDGSAVIPFRSASGIYYFSPHASRQGDVNVAEK 434 Query: 480 --YNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL---DGE 534 ++ + GT+GAGK+ + + + G V D G G++ M G Y+ G+ Sbjct: 435 LAAHVKLQGTTGAGKSTVATAIAGMLSRFGQLLFVLDKGRGWEVFIRAMRGAYVHLEKGK 494 Query: 535 TLRFNPFANITDIDQSAERVRDQLSVMASPNG----------NLDEVHEGLLLQAVRASW 584 + PF + D ++ E + + + NG +L + AV A Sbjct: 495 PTGWAPFE-LADTAENREFLYGLVELCGRRNGVDHQGKSVKIDLTAAEKIQCRNAVDAVM 553 Query: 585 -LAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTA--NGTYGQYFNS 641 + R ++D + + D D + L + NG + F++ Sbjct: 554 GIEDVRLRRFSLLLDSIPDEGD--------------DSLRQRLSLWCKSENGRFWWVFDN 599 Query: 642 DEPSLR--DDAKMVVLELGG-LEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 + + + ++ L + L + V++E Sbjct: 600 PPNLALNMTEQRWIGFDVEAFLVENYEPSEPAFAWLFHL---KKLMRGEGRLMQTVMEEY 656 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 W + F+ + E IE+ + R+ ITQ KA+ A + + Sbjct: 657 WMPIRFRT--IREQIEETLASGRKEGEFITLITQQPEQ--GQKAADLYPALRSLVATNLY 712 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHS--SWHRLFVDP 816 L A E Y + D + K + + FL++ N S + L Sbjct: 713 LADPAAEEEAYVR---DGMTRKEFTEFRKLTPSSRR----FLIKQGNQSAFAVFDLSGMD 765 Query: 817 LSRAMYSSDGPDFEFVQQKRKE-GLSIHEAVWQLAWKKSGPEM 858 + A++S D + R E G + + ++ Sbjct: 766 DAIAVFSGDRENVLICDTVRAELGEDPDVWLPVYLERVFERKL 808 >UniRef50_C2HEY2 Conjugal transfer protein n=3 Tax=Enterococcus faecium RepID=C2HEY2_ENTFC Length = 715 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 86/697 (12%), Positives = 207/697 (29%), Gaps = 96/697 (13%) Query: 57 MNDTTMGFMLEAIPING---ANESIVEALDHM--LRTKLPRGIPLCIHLMSSQLVGDRIE 111 ++D T +E IN + ++ +E L L + + + ++ Sbjct: 57 IDDITYSTTIELEDINYQLSSEDNQIEIFSQYCDFLNSLSSKTKLQLTVYKKKRPLADLQ 116 Query: 112 YGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKK 171 L + + + K + + + +H ++ + Sbjct: 117 KVLYYQEKGDFLDDYRSEMNEVISRKLDEEKNGYRKCILFTFVQKHTKI---------EH 167 Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 + ++ + + + + L + ++ + I+ E++ + K Sbjct: 168 AEKELEMVADRFAMFASRLGS---KIKRIEKTELLTILSEILGTDDKREKQKV------- 217 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 + + ++K +YL + +L P + L Sbjct: 218 ---EDVLPEVIEIKENKNYLKVDTH--------YAKTIYLQEYPS--------ELADTFL 258 Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKT----------SYAKWFPSV 341 L I ++TL + +Q + K +E++ Y + Sbjct: 259 YELLEIPKELVITLHIDPLEQDEAFDLVKTKLAFMEQQKVDEQKKALQNGYDYEMLSYDL 318 Query: 342 EKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISP 401 E L L + + + +I E E++ ++ R+ GF++I Sbjct: 319 SYSLTEAKGLVDDLQNRGQKLYAMTSSIHFRAGTT-EQLAEIQDEVNAVGRRFGFKIIEL 377 Query: 402 RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY 461 F LP + + + + A +P + + G Sbjct: 378 EFMQENGLNATLPLGIN--------SIPLDRTLSTASTAIFIPFTISDLIQENGKYYGVN 429 Query: 462 RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG--FAVVFDMGDGY 519 + + N V GT G+GK+ ++ I +VL ++ D Y Sbjct: 430 AISKNILSL--DRKLLKAPNGFVLGTPGSGKSFSVKREIVNVLLRDAEDEVIIIDPEREY 487 Query: 520 KSLCENMGGVYLDGET---LRFNPFANITDIDQSA-------ERVRDQLSVMASPNGNLD 569 + +N G + + NP + E + ++ L Sbjct: 488 SVIGQNFNGEIIKISSDSATTINPMDINENYGDDTDPVVLKSEFLISLFDLIIGGALGLS 547 Query: 570 EVHEGLLLQAVRASWL-AKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 + L+ + R ++ + D + LK ++++ L+ Sbjct: 548 SAQKTLIDRVCRRTYEIMSGDMPTFVDFYNILK-----------EQEEEEAKQLVMDLEI 596 Query: 629 YTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRM-YRTPR 687 Y F++ + ++ ++V+ ++ L L M ++ + NR+ R Sbjct: 597 YIEGSL--SVFSA-KTNVDITKRLVIYDIKDLG--KQLKTMGMLIVLDQVWNRITENRER 651 Query: 688 NLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHT 724 ++ IDE L F N + + + AR+ Sbjct: 652 GVRTWLYIDEMQLL--FTNEYSENYFFELWSRARKWG 686 >UniRef50_Q47SQ2 ATPase n=3 Tax=Streptosporangineae RepID=Q47SQ2_THEFY Length = 827 Score = 238 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 123/869 (14%), Positives = 251/869 (28%), Gaps = 96/869 (11%) Query: 35 MSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESIVEALDHMLRTKLP--R 92 M F + + L R ++ L + F L + EA + L R Sbjct: 1 MKFSRRASRLAVRYFDDRVLLSDTEAWAYFRLPTFSYEFSTPEEREAFATNITIALAAIR 60 Query: 93 GIPLCIHLMSSQLVGDRIEYGLREFSWSG---EQAERFNAITRAYYMKAAAT-------- 141 +HL + +E+ R S E + + R + K T Sbjct: 61 MNDAEVHLRIAHRTYPAVEWATRLDETSDSGPGWYEYLDEMYRHVWAKDFWTKEVYLGVR 120 Query: 142 ------QFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASI 195 + L +G+ L + R + +I + + +L +S+ Sbjct: 121 LGQRGVRAQLSQGVFAQLLGIYQRTERTLGLEDDAVDDREIARWTAQAERLGRALAASSL 180 Query: 196 TTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGL 255 + A ++ + + +E D + L L Sbjct: 181 HARHARASELAWLLRHSVTATIEEPRESAAG---RRRWGRGEIEALVDGVIHNGRSYLRL 237 Query: 256 RENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKT 315 + G A + +R P++ + L+ ++ P +L + + K Sbjct: 238 EQPGGE--AYVSYLSFSRFPDLMPFPDGEP----WLHYADALPFPVEASLRMKLVPPAKA 291 Query: 316 HSEANLKYMDLEK-KSKTSYAKWFPSVE--KEAKEWGELRQRLGSGQSSVVSYFLNITAF 372 + + + ++ S A P + ++ L + + V + + Sbjct: 292 SKDVSRRLAHARDMQAHMSEAGAEPDIALVEQINAARMLEHGITKERLPFVYGWYRLIV- 350 Query: 373 CKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQ 432 + ++ + + +R G +L + F LP +L+ VQ Sbjct: 351 AAPTYDLLVQRVEAVTEHYRDIGIDLTQSTGDQFSLFCESLPG-------DRLRLEAYVQ 403 Query: 433 RAESFNVANLMPLVADNPLTP--------AGLLAP---TYRNQLAFIDIFFRGMNNTNYN 481 R +A MP G + D N Sbjct: 404 RQPLRTIAGGMPTATVELGDRKDSSGAGWIGPYIGETIGRARSIVHFDPLVAAARNRPTA 463 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENM-----GGVYLDGETL 536 +A+ G G GKT L LI + G D SL + + + E+ Sbjct: 464 IAITGEPGGGKTTLALLLIYQLALRGVTVAAIDPKGDAASLVKLLQRRGRKARIMALESA 523 Query: 537 R---FNPFANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARI 593 + +PF D+ + L ++ + E E ++QAV A + + Sbjct: 524 QAGLLDPFGFGDDLPTKKTMATETLRLLL---PRMSEERESAMIQAVAAVADQP--QPSL 578 Query: 594 DDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMV 653 VV +L++A D+ +RS + + L + G + + + Sbjct: 579 GKVVTYLESADDAASRNLGAVLRSMSEMRLARLC-FHPQG---------DTQVDTEGWTT 628 Query: 654 VLELGGL-----------EDRPSLLVAVMFSLIIYIENRMYRTPR-NLKKLNVIDEGWRL 701 V LGGL L + L+ R+ + K +DE W + Sbjct: 629 VFTLGGLTLPDSTVHRDDYSYEQRLSVALLYLVSQFARRLMNGLDWRVPKAIFLDEAWAV 688 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 + + + + R R A I ++QN D +++ ++ + + S Sbjct: 689 --TSTPEGAKLVPEVSRMGRSRNTALILVSQNAGDLLNEQVTNCISSVFAFRST------ 740 Query: 762 SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM 821 E L + + G + F L L + L R + Sbjct: 741 ERVEVRNVMSLLGIEPSEEHIAALRNLGNG-ECIFRD--LDGRAGRIAVDLVSEELLRWL 797 Query: 822 YSSDGPDFEFVQQKRKEGLSIHEAVWQLA 850 ++ V++ + + + Sbjct: 798 DTNPTRRKPQVEEDGALVGNTTRDIREPL 826 >UniRef50_Q3EN28 TRSE PROTEIN n=9 Tax=Bacillales RepID=Q3EN28_BACTI Length = 645 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 82/633 (12%), Positives = 188/633 (29%), Gaps = 71/633 (11%) Query: 247 RADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSN-LLNPELSISCPFILTL 305 +L ++ G S +++ ++ L +++ I TL Sbjct: 23 YNPFLVARVQPQGGISFKESYFQTGDGLGTCIHVYDYPTEVNDFWLEQIMNMP-NVITTL 81 Query: 306 TLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPS---VEKEAKEWGELRQRLGSGQSSV 362 ++ +++ + N E+ + AK + E E L L G + Sbjct: 82 DVMSDNRNEVVESINK--SMSEQSVRHDTAKDNIDRIDAKNEFLELEALYTDLKQG-EVM 138 Query: 363 VSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLF 422 + I + + + ++IL + F + + Sbjct: 139 KRIHIRIYVSAR-TIDELEKQVKEILETLESYNFRGAVFLNEQEYEWDA---LVTSFDTQ 194 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY-RNQLAFIDIFFRGMNNTNYN 481 K + + ++A P P G T DIF + +YN Sbjct: 195 KNYVNRRKGKEIPAVSLAGGCPFHYSYLHDPYGTYYGTTKTKGNVIFDIFHKDNQRKSYN 254 Query: 482 MAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFN 539 + G SGAGK+ L++ G F +FD+ + + + +GG + DG + N Sbjct: 255 GVMIGKSGAGKSTLLKKKSVDYASKGHFVRIFDVVEEFTDTVKELGGKTISLDGSQGQIN 314 Query: 540 PFANITDIDQSAERVRDQLSVMASPNGNLDEVHEG----LLLQAVRASW----------- 584 P + LS + + + +R + Sbjct: 315 PLQVYKTAELEEVSFTQHLSKLTIFYRFIAPEAKDDEIKEYENLLRKLYIRMGLWNDEKG 374 Query: 585 -------LAKENRARIDDV----VDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 + D L ++ ++ ++ ++ L+ Sbjct: 375 AKNEITTRKSKEYPIFSDFLMFVRKELYQDVEARKHHDNLGDSRIHRLELIELNLTNLVE 434 Query: 634 TYGQYFNSDEPSLRDDA-KMVVLELGGLED-RPSLLVAVMFSLIIYIENRMYRT------ 685 Y + F+ ++V L + +P + A +F+++ + + M Sbjct: 435 AYAELFDGHTTIEDFKKEQVVSFSLRNISSFKPEVFQAQIFNVLNLLWDEMISNGAPQLK 494 Query: 686 ---------PRNLKKLNVIDEGWRLLDFKNHK--VGEFIEKGYRTARRHTGAYITITQNI 734 ++ +IDE +++ K +F+ K R R++ + + I Sbjct: 495 AFNKKQLAFEDVVRYFIIIDEAHHIINTKKESAHALQFLTKLSREDRKYFAGLLYASHTI 554 Query: 735 VDFDSDKASSAA----RAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 DF + +S + + + YK I++Q +++ Q + I Sbjct: 555 RDFVPEGSSQEMIDEIKKLFELTQYKFIMQQDNNSLDMLRKVFAGQLSESEIAAIPHLPT 614 Query: 791 AKDQWFSSFLLQVENHSSW-HRLFVDPLSRAMY 822 +L + + + V ++ Sbjct: 615 G------DVILSIGAVKNIHFHVEVTDEELMLF 641 >UniRef50_B8I092 Putative uncharacterized protein n=4 Tax=Clostridiaceae RepID=B8I092_CLOCE Length = 610 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 81/558 (14%), Positives = 185/558 (33%), Gaps = 60/558 (10%) Query: 267 LNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDL 326 + + + P+ A L+ +I + ++T D + Sbjct: 39 RVYGIVKYPQSADY--------GWLSKLTNIPS-TVASITFTPVDDSVFLESLSNTIKQK 89 Query: 327 EKKSKTSYAKWFPS-VEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 + +++ S ++ A + ++ ++ + + L + +D + +V Q Sbjct: 90 RGECESAKDALTASRAKRAADDAEKMMIQVDQHGEKIGAMSLLVAPLTRD-EKLLKKVCQ 148 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 + ++ + +F PF A +++ + + P Sbjct: 149 KVESAIAVAKCKGRVLSSLQKESFKQLSPFYASNEQIERI----TQRILPLSSFIGGFPF 204 Query: 446 VADNPLTPAGLLA-PTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 + G L +D + RG + TN M + G G GK+ I+ +I + Sbjct: 205 ASSGLNDGQGYYLAKDASGGLVVVDPWMRGGDRTNSCMTIMGVGGVGKSTAIKHIIMAEY 264 Query: 505 DSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFAN----ITDIDQSAERV--- 554 G ++ D YK L N+ G +L+ G R NP D D+ ER+ Sbjct: 265 MRGTKIIIIDPESEYKELTRNLQGDWLNCGGGIKGRLNPLQIRQVPKDDEDEDGERLYED 324 Query: 555 ------------RDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKE-------------N 589 + + ++ H L+ + + + Sbjct: 325 EGNGMGALALHMKSLEIFFKLYKPSFNDKHMALIKICLIEMYEKFGITWDTDVTNLKNED 384 Query: 590 RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDD 649 D+ + ++ E + + ++ L G+ +N S+ Sbjct: 385 YPIFTDLNEIIEEKKSKETEPNIKALYVDISLLLHDL----IFGSDQFLWNGH-TSIDTK 439 Query: 650 AKMVVLELGGLEDRPS-LLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHK 708 + V L+ L+D + F+++ + +M R R + L + DE + ++D + + Sbjct: 440 TRCVCLDTHDLQDTSDNIKSTQYFTILQWAWEQMTR-DREERVLLISDEAYLMIDHRVPQ 498 Query: 709 VGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAK 768 F+ + AR++ A I+ ++VDF +A KI++ K + Sbjct: 499 SLIFLRNAVKRARKYEAAIAIISHSVVDFLDPSVKMYGQALLDIPCIKILMGTDGKNLQE 558 Query: 769 YNQLYPDQFLPLQRDMIG 786 +LY + +++ Sbjct: 559 TKELYK--LTEAEEELLA 574 >UniRef50_A9HT13 Type IV secretion n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HT13_GLUDA Length = 848 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 114/794 (14%), Positives = 230/794 (28%), Gaps = 87/794 (10%) Query: 101 MSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRV 160 ++ + + Y E S G A + A Q + LR Sbjct: 107 LAQSRLVHVLVYEDPEASKGGLITSLLRQGPFALFDSDAREQVKQRFSALGQMLLRE--- 163 Query: 161 FISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSL 220 K+ R E+ K ++ A + + + N L Sbjct: 164 -----REISKRLRELERACEDARKKWEMAMGSA----RRMPLDQLWTFAKFLGTMNTRYL 214 Query: 221 YPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIA-F 279 + P DL+ ++ Y + ++ L + PE Sbjct: 215 RFGQYLTTPEDDLDAVLMDGDVS---TVSYHGAEMLMLHGLVPNYAVSMGLVKTPENPIG 271 Query: 280 LWNMADNYSNLLNPELSISCPFILTLTLVVEDQVK-------THSEANLKYMDLEKKSKT 332 +W ++S + + +I+ + ++ + + + +D+ + K Sbjct: 272 MWTRQKDHSPI-----AQEGNYIININFSPLSAIRRYLLFQNARNSLDRQRVDVRQLFKG 326 Query: 333 SYAKWFPSVEKEAKEWGELRQRLG---SGQSSVVSYFLNITAFCKDNNETALEVEQDILN 389 E E E +++L S + + F DN + +E + + Sbjct: 327 QPTTEAERQATETYEIKEAQKQLERASSLDERFGTISGQVVIF-GDNPDAVIEDAERMTT 385 Query: 390 SFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNV-ANLMPLVAD 448 + L+ + F + + + A P V D Sbjct: 386 AMEATQARLVWEKTGLPNAFKSLQIGGYRNSDRTTVGTESRFGAVSLYAAPAIGTPEVED 445 Query: 449 NPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGG 508 A + T + + G T G +G+GKT + L GG Sbjct: 446 LGGEEAQYIFETEDGNPFYYSSYAGGKAFT----FAVGPTGSGKTFFKNTITSHFLKYGG 501 Query: 509 FAVVFDMGDGYKSLCENMG--GVYLD-------GETLRFNPFANITDIDQSA--ERVRDQ 557 F D+ G + L G G + GE +PF + + +A + D Sbjct: 502 FVRSLDVDAGSEPLAHAFGKDGGIIRLGEDDASGEPRGIDPFVSFRGVGDTAFTSHIIDL 561 Query: 558 LSVMASPNGN-----LDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAES 612 ++ N N L + L +A+ A+ + + L + + Sbjct: 562 CRLLLDVNDNEETRVLTGREQQTLDEAIIATLE--ISNPNLRTFRHMLAHLPE------- 612 Query: 613 PTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSL-RDDAKMVVLELGGLEDRPSLLVAVM 671 E+ ++ NG Y FN+ + + ++ V+ L ++ P ++ V+ Sbjct: 613 --------ELGYKFARWMTNGVYDGIFNARQDGMGDSSKRIGVINLHKFKETPKIIKPVL 664 Query: 672 FSLIIYIENRMYR-TPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITI 730 L + R + K +DE L E I RT R+H Sbjct: 665 LDLFYRVTTLFEDPAMRMIPKQLDVDEAHLPLSV--PGFAERITTKARTWRKHMAGITMW 722 Query: 731 TQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGA 790 +Q ++ + R A I + + + Y Q + P DMI K Sbjct: 723 SQGAREYATLPDWDVLRGAATQ---FIFMADPRMDESAYQQAFK--ITPGVIDMIRKLTP 777 Query: 791 AKDQWFSSFLLQVE--NHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQ 848 + ++ + +L V+P + +S + +E E + Sbjct: 778 RE-----EAVIVQPDLGVAKKVKLRVEPEQYVINTSHPREASERDLLMREYG-PAEGLRA 831 Query: 849 LAWKKSGPEMASLE 862 + ++ E Sbjct: 832 AVERYKAGKLGKEE 845 >UniRef50_C2JSV3 Conjugal transfer protein n=12 Tax=Enterococcus faecalis RepID=C2JSV3_ENTFA Length = 796 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 93/726 (12%), Positives = 211/726 (29%), Gaps = 57/726 (7%) Query: 110 IEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSK 169 + E Y + E + Y +F + S K Sbjct: 103 VNKREEESLMEDVLLAYQGDHLDNYRQEINEIITKQYEQDERNFKIEKYAIFTTKSSSMK 162 Query: 170 KKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDP 229 + ++ M+N A+ + + + + + H + Q Sbjct: 163 QANKELEGIMQNFANRFEAN--QIKLEVTPMTGLERLSLFSYFLRHG--QYFGTSYQDIA 218 Query: 230 YSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSN 289 S L + +K + L EN + + P+ + + + Sbjct: 219 VSGLTSKAFIVPSKIKFPNNKAYFRLGEN------YAAVLTIQQYPKYLEDKLIKELCAT 272 Query: 290 LLNPELSISC-PFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEW 348 +SI P+ + KT ++ ++ + KE +E Sbjct: 273 GRELAISIHARPYDMMEARKAIQGTKTLNDVAIQKQQKQNFRSGVSEDAISGEAKEIQET 332 Query: 349 -GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMR 407 L + + + + ++ + + LE + + N + Sbjct: 333 TNALIDEIKNNGQKLFNGLFSVFLIA-ETEKELLEAVESVKNVGATWQVVFDTVDNYKEE 391 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAF 467 T LP E ++ + N+A +P + G + Sbjct: 392 ALNTILPIGKPYLD----VEMSYMRDLTTTNIATQVPFTNVELQSSTGQFYGRNQLTKNM 447 Query: 468 IDIFFRGMNNTNYNMAVCGTSGAGKTGLIQ--PLIRSVLDSGGFAVVFDMGDGYKSLCEN 525 I I R + + + GTSG+GK + L + ++ D Y + + Sbjct: 448 ITI-DRKKDLITPSGLIFGTSGSGKGMATKWEILSTRLKFPKDRFLIVDPESEYLPIGKE 506 Query: 526 MGGVYLDGETLRFNPF--------ANITDIDQSAERVRDQLSVMASPNGNL----DEVHE 573 + LD T N + + DQ + V+++ +++++ +L +V Sbjct: 507 LDAEILDISTGTKNHLNILGMVDKQLLDEEDQELDLVKEKSNLLSTMFESLLKSYTDVDA 566 Query: 574 GLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG 633 GL+ + ++ EN+ +VD+ + + E+ ++ Y Sbjct: 567 GLVDRVTLLTYERFENKETEPTLVDWFRILKEQTDEG--------AKELANKVETYCVGS 618 Query: 634 TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLN 693 F + + ++ A +V L L M ++ + ++ + Sbjct: 619 Q--DIF-AHQTNIDLTAPFIVFNTKKL--DDRLKKFAMKVILDQLWKQVVSGQGKVTSRL 673 Query: 694 VIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNS 753 DE ++F + E+ + R++ ITQN S A + NS Sbjct: 674 YFDELQ--VNFTTEEEAEWFLNLWARIRKYGAVTTGITQNPTTLLD---SKAGQKMIANS 728 Query: 754 SYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLF 813 + I+L+Q + + ++ P + I L+ Sbjct: 729 EFLILLRQKPIDSQRLVEIL--SLTPALKKYINDRAPQGTG-----LISAGGVVVPFENP 781 Query: 814 VDPLSR 819 + + Sbjct: 782 IPKETH 787 >UniRef50_D1JWZ2 Putative uncharacterized protein (Fragment) n=2 Tax=Bacteroides RepID=D1JWZ2_9BACE Length = 627 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 97/603 (16%), Positives = 193/603 (32%), Gaps = 63/603 (10%) Query: 288 SNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKE 347 S L L + I+ + + + D T + EK + ++P ++ +E Sbjct: 52 SMLYPVGLGLPFNHIVNIVIEITDPDATVTAI-----GAEKDALNYITNFYPPAAEKQRE 106 Query: 348 WGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELI------SP 401 + N+ D + + GF + Sbjct: 107 QAAFCDEITQFDYQTAYTAFNVVLNDTDRTSLMRKTA------LVQQGFSFMNQSSCYVE 160 Query: 402 RFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTY 461 F +P A + + + G + Sbjct: 161 NAELCNLFFCNIPGNARANYRGFVN--------TTKQAICYLQKEGMYLSDEKGHIYHDR 212 Query: 462 RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKS 521 A I+++ N N V G SG+GK+ + I + G ++ D+G Y+S Sbjct: 213 FGTPAKINLWDYPA-LNNKNRIVIGPSGSGKSFWLNNYILQSYELGRDVMIIDIGGSYRS 271 Query: 522 LCENMGGVYLDGETLR---FNPFANITDI---------------DQSAERVRDQLSVMAS 563 + G Y D + FNPF D D + + +S + Sbjct: 272 MIALNRGKYFDSTEQKKFAFNPFLCDRDKNGKYLYIDTTDAESADDQIKTIVAIISYIWK 331 Query: 564 PNGNLDEVHEGLLLQAVRASWL----------AKENRARIDDVVDFLKNASDSEQYAESP 613 + +L ++V + + + +LK S++ E Sbjct: 332 VREPMLPAENAILRKSVIGFYDYVNNSSIGEKHERIFPTLITYRAYLKEV-FSKRMTEFE 390 Query: 614 TIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFS 673 + ++E+++LL+ YT +G N+ E +++ ++ + V Sbjct: 391 KQKFEIEELLLLLEPYT-DGELSFLLNATENVDIVHDRLIAFDMED-ASKKEYFPLVAII 448 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 + I +++ + K +IDE L ++ K G+FI YRT R+ G+ QN Sbjct: 449 TLQMIVDKIKKRQ-GFAKELIIDEALDFL--QDEKFGDFIAYLYRTFRKKEGSITLAAQN 505 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 I+ F + SS + N + KIIL S + MI + Sbjct: 506 IL-FLKNMPSSIKDSIIINCATKIILDHSEHRQNLPEVKAVLSITDEEAYMIESLQ--RT 562 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKK 853 + + F +++ N + R V + + S ++Q E S + A+ + ++ Sbjct: 563 ERWREFFIKMSNDAFIFRNEVSDFAAVAFDSRQATVVRLKQLFNESGSTYTAINRYLEER 622 Query: 854 SGP 856 Sbjct: 623 RKK 625 >UniRef50_A7VXU4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXU4_9CLOT Length = 848 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 112/836 (13%), Positives = 255/836 (30%), Gaps = 88/836 (10%) Query: 50 NQESGLFMNDTTMGFMLEAIPINGANESIVEALDHM----LRTKLPRGIPLCIHLMSSQL 105 Q+ L D +LE +P N +S +E + + K+ + Sbjct: 49 IQKGVLITEDGRYIKVLEIVPTNFYLKSRIEQQNIIYYFSCYLKIAPQSLQILVCTQRAD 108 Query: 106 VGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYC 165 + + + ++ + + + A + A+ R + + Y Sbjct: 109 IDAYCDQMEKYYNREKNENCKAMILEDAQLVNYLAS---------YEAVTRRFYLIYEYK 159 Query: 166 SPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRR 225 + + + E+ + + L + D + ++ + + + Sbjct: 160 GEATEFTEIS-KELADQAETAYQYLDYCGLEVLRHD-----NYDEFLLRTVYTAYHKQSA 213 Query: 226 QLDPYSDLNYQCVEDSFDLKVRADYLTLGLREN-------------GRNSTARILNFHLA 272 + +S L Q ++ D L E + IL + Sbjct: 214 RNINFSALMEQVGPVFNTPEITEDQLEEEDSEGITTIQDVLAPTEADLEHSKYILIDGVY 273 Query: 273 RNPEIAFLWNMADNYS-NLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSK 331 ++ L+P + + ++L+ +E + K + + + +S+ Sbjct: 274 HAYLYITGYSYPTERGLAWLSPLIELGDG--ISLSFFLEKKRKEQILSKVVKTTMINRSR 331 Query: 332 TSYAKWFPSVEKEAKEW----GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDI 387 + + +E + ++ RL I D T + + + Sbjct: 332 LRDIEDIRADYEELDDAIYSGMYIKDRLNRDGEDFFYMHTLIEVTALDET-TLNKRIKQV 390 Query: 388 LNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA 447 N + H + F + LP + + A P + Sbjct: 391 QNLCVSMDMTARRADWCHEQCFRSMLPIAK----LDMDIAKRTQRNVLTSGAAGAFPFSS 446 Query: 448 DNPLTPAGLLAPT--YRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLD 505 G+L + N +D F +N N+A+ G SGAGKT + L + Sbjct: 447 FELCDNKGVLMGINLHNNSAVIVDNFNSD-IYSNGNLAIFGMSGAGKTYTLLLLAMRLRM 505 Query: 506 SGGFAVVF--DMGDGYKSLCENMGGVYLD---GETLRFNPFAN---ITDIDQSA------ 551 G + + G Y+ CE +GG +L G N DID + Sbjct: 506 CGVQVFIIAPEKGFEYRCACEAIGGQFLRLSPGSEDCINLMEIRRSTLDIDSNLANNIQR 565 Query: 552 ------ERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVD---FLKN 602 +V+D + + + L A+ + + +++ K Sbjct: 566 NDSVLLSKVQDLHTYIRLRYPQITPEEAYQLNIAILECYESFGITKDNRSLLNPDGSFKA 625 Query: 603 ASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLED 662 D L + + + + G + ++ + +VL+ G + Sbjct: 626 MPDFTHLYSCLLKYPSLKNVALAVKEIIDFGM------GGQTNVDLFSSFIVLDTSGAKK 679 Query: 663 RPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFK-NHKVGEFIEKGYRTAR 721 + + + F +I + + R+ R KK + DE W + + N + +FI + + R Sbjct: 680 KD--ISSSTFVATSFIRDELSRS-RTRKKAVLGDELWVIAGEEGNEQAADFIIEMVKLIR 736 Query: 722 RHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 + +++ TQN +D+ + + A NS K++L+ E K + + Sbjct: 737 GYGAIFVSATQNTLDYFALRDGKFGDALLNNSRLKLLLQMEEAEAIKLQEKLGLSDEEVM 796 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRK 837 + + LL + + + +++ D E + + Sbjct: 797 QVV--------RCGRGQGLLCAGKNRIGIEIRSSQTEYELITTNRTDLEKREARTD 844 >UniRef50_Q0GTZ5 TraE n=1 Tax=Lactococcus lactis RepID=Q0GTZ5_9LACT Length = 795 Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 108/852 (12%), Positives = 250/852 (29%), Gaps = 95/852 (11%) Query: 7 AVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRL--LPYRDYNQESGLFMNDTTMGF 64 Q + T L ++ + S L Y + + + D Sbjct: 6 LFNQKKSKKQTPLSKHEKLKLKRLKTNANRAKKTSSQNTLKYTSLFENGLMNIVDDNYSM 65 Query: 65 MLEAIPINGAN------ESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFS 118 E N A ++I E + M+ T + + ++ S++ + EF Sbjct: 66 TYELGSTNYATTTIETKQTIFEKYNSMINT-ISDEEHFQLTILVSKVHSKEYQQK-NEFE 123 Query: 119 WSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILE 178 G+ + + + + + IS + +KK + + Sbjct: 124 LQGDDFDYLREELNHLIHENYKNGYNNYQI--------DRYITISTKAENKK---KALSK 172 Query: 179 MENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCV 238 ++N ++ +SL + + + + +++N++ + + D+ C+ Sbjct: 173 LKNTETLLASSLAPIEVPIKQQTGLERLSLFNKILNYD-------KPLYGNFDDIKKSCL 225 Query: 239 EDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSIS 298 + ++ + E G +L P + L Sbjct: 226 TTKDLIAPQSLKFSQSGVEVGERFN---QVLYLKEFP--------MELSDGLFKDLSMCG 274 Query: 299 CPFILTLTLVVEDQVKTHSEANLKYMDLE-----KKSKTSYAKWFPS-----VEKEAKEW 348 ++T+ ++T ++ +E ++ + P ++ ++ Sbjct: 275 QELVITIQADPYSIIETSKRLRMQATSIESEVIKQQKIAIKDGYSPDFIGRTAKETQEDL 334 Query: 349 GELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRN 408 E+ + S + + E E + I K G + + Sbjct: 335 NEVINLVRETGDKQFS-SIFLVYITGKTKEERTENSRIIKALGEKYGANFETLDYLQEEA 393 Query: 409 FLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFI 468 + LP ++ + + N++ P + G I Sbjct: 394 LNSVLPIGKNYTDCEK----TFQRDLITPNLSVNSPFTTVDINHKKGKFYGINLFSHNII 449 Query: 469 DIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGF--AVVFDMGDGYKSLCENM 526 I R + N N + G SG+GK+ + I + L +V D Y L E + Sbjct: 450 SIDRRDESMDNSNGLITGVSGSGKSMTAKNEIVTTLLKNPKDEVIVLSPDDEYNDLPEKL 509 Query: 527 GGVYLDGETL---RFNPFANITDIDQSAE------RVRDQLSVMASPNGNLDEVHEGLLL 577 G + N D + +S+ +S + E+ E ++ Sbjct: 510 DGQLIKIAPNTKHHINILDLPKKEDLKDGDDPVGLKSSFLVSLFSSLFETVSEIQESIID 569 Query: 578 QAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQ 637 + ++ E + + + + L+ + + + A ++ + Y Sbjct: 570 EVTIETYQKHE-KPTLLEWYEVLETKTFNNEEAL---------DLTQKIKMYITGSM--D 617 Query: 638 YFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP-RNLKKLNVID 696 F S E ++ +++ +V ++ L +L I R+ + + + D Sbjct: 618 IF-SKETNVDLNSRFIVYDISQLTT--KFKPFGFMALEENIWQRVVKNNAKGITTWVYFD 674 Query: 697 EGWRLLD-FKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSY 755 E LL + E + + R++ G ITQ I + R+ + NS + Sbjct: 675 EIQVLLSGKSSEISREKFKDIWSRIRKYGGNPTGITQFIDTVLE---TPEGRSMFFNSEF 731 Query: 756 KIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVD 815 ++LKQ Q Y Q + L+ N + Sbjct: 732 LVLLKQKKFAIEIIKQHY--NITEQQEQYLKTPKKGSG------LIIAGNAIVPFENTIP 783 Query: 816 P--LSRAMYSSD 825 + +D Sbjct: 784 SSTELYKIMQTD 795 >UniRef50_A1WP68 Type IV secretory pathway VirB4 components-like protein n=2 Tax=Comamonadaceae RepID=A1WP68_VEREI Length = 823 Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 115/861 (13%), Positives = 246/861 (28%), Gaps = 126/861 (14%) Query: 38 PQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANESI----------------VEA 81 ++ LP+ + + D ++ E G + ++A Sbjct: 13 ESLAQFLPWLVHVTPDLVLCKDGSLLAAFE---YTGVDIDEDNPLVIDSAVLQLQKALQA 69 Query: 82 LDHMLRTKL---------PRGIPLCIH--LMSSQLVGDRIEYGLRE-----------FSW 119 LD P H L ++ +++Y ++ Sbjct: 70 LDERFYIWWVIDKRKKLAPDQWESDAHDGLHAAMAARRKLQYDSGRVFTIDFRAFISYTG 129 Query: 120 SGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEM 179 + + R + + L G++ R+ + ++ +I + Sbjct: 130 ETGVYAFMDQVRRRMTEQGQSLPAALLSGLDPARNFRNAVLH------DARQLDENIRQA 183 Query: 180 ENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVE 239 E ++ A+ S+ + + + + M N + + Q+ P+S L+ Sbjct: 184 EGGIRQFIAANSVVSL--RRMGGWKLDNCLVRMANLSHRAE--PDHQVLPHSMLDA--AA 237 Query: 240 DSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISC 299 D+K + L G + + L P + L L + Sbjct: 238 ALSDVKFGREVLI----SYGPDRHVFGVALTLKDYPAS----------AATLLGILGLHM 283 Query: 300 PFILTLTLVVEDQVKTHSEAN-------LKYMDLEKKSKTSYAKWFPSVEKEAKEWGE-- 350 L + + + + L ++ P V+ + Sbjct: 284 ELRLVHVIKCMSAATARATLDEVTRYYRMTQSTLLQRVGAYLNGAQPEVDPGKADLYAQC 343 Query: 351 LRQRLGSGQSSVVSYFLNITAFCKD-NNETALEVEQDILNSFRKNGFELISPRFNHMRNF 409 L+ ++ ++T D + A + + L S K LI R ++ Sbjct: 344 LQAMRRQLAENLGFVHHSMTLIVLDESARAAEQRADEALRSLSK--IPLIRERVGLKASY 401 Query: 410 LTCLPFMAGKGLFKQLKEAGVVQRAE-------SFNVANLMPLVADNPLTPAGLLAPTYR 462 L+ LP L A +V +A N + P + Sbjct: 402 LSMLPGQWATNRRLMLANAELVAQAAPLVTAEAGSNYCQHLSSQVYGKHVPPLATFQSML 461 Query: 463 NQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYKS 521 D F + + + +G GKT + + G ++FD + Sbjct: 462 GTQVHFDPFVGQV----GHTLLVMPTGGGKTTFVNYCLSQFTRYERGQVIIFDRDRSCRI 517 Query: 522 LCENMGGVYLD--GETLRFNPFANITDID-QSAERVRDQLSVMASPNGNLDEVHEGLLLQ 578 + GG ++D +R NP +N+ D + L +A + L + Sbjct: 518 ITGLAGGTHMDMRSNGMRLNPLSNLRHGDLGKVQAREFLLRRIAEAGDGVLAEDRQELYR 577 Query: 579 AVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY 638 + + + + V L ++ VLL ++ G +G Y Sbjct: 578 VLDNVAQSSQELR-LSTVWTLLP------------------RKLQVLLSEWVEGGPFG-Y 617 Query: 639 FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEG 698 F+S + A +E+ G+ L A + + IE ++ L ++E Sbjct: 618 FDSVQDDFEV-ADWTCIEMRGIMSVERLARAFLDHALTVIERQLT----GRPTLIYLEEA 672 Query: 699 WRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKII 758 +L+ + + I+ +T R+ Q+ ++ N I+ Sbjct: 673 SFVLN--DGAFLDAIDGWLKTFRKLNAMVWLTVQSPQAVSGIESEKIRATLADNVPNLIL 730 Query: 759 LKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLS 818 E + Q +IG+ +D + N + R D + Sbjct: 731 GYNPRLENHRPLYRSMFGMTHEQVSLIGELTPKRDYLR----IFSGNCQTL-RTDFDDYT 785 Query: 819 RAMYSSDGPDFEFVQQKRKEG 839 A S+ + Q + G Sbjct: 786 LAHLRSEPAYQDLFDQAKASG 806 >UniRef50_B6JNJ9 VirB4 type IV secretion ATPase n=15 Tax=Helicobacter RepID=B6JNJ9_HELP2 Length = 858 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 88/713 (12%), Positives = 218/713 (30%), Gaps = 69/713 (9%) Query: 172 SRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYS 231 + + + ++ ++ +L+ ++++ ++ E IN + + + + S Sbjct: 197 TTSKRALLIQTIERVKNALK--EFKPTLLNSKEVLNFYAEYINGKYIA-FNPKLKRLSDS 253 Query: 232 DLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLL 291 + ++ + DY + + N + + S + Sbjct: 254 YIA-------SNVHFKKDYFVIEFQ----NQNTFCACVGIKAY-------ESEEISSLPI 295 Query: 292 NPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGEL 351 + L L + E + K + + Sbjct: 296 STLLHTQIELDLIFHIRSL-------------GQFESLNFLKTKKKLTLSKIVKADIDNY 342 Query: 352 RQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLT 411 + + + + S+ LN+ K + + ++IL+ G ++ ++ + Sbjct: 343 IELVQANRLSMQECALNLVIRAK-SKAKLDKSLKEILSLLNNAGLGSVTETIGLKPSYFS 401 Query: 412 CLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIF 471 P A + + + V+ F N A++ + + + Sbjct: 402 FFPNNANINPRMRHQTSQVIASLILFE-KNNTGFRANSWGDMPLSVFKNLDHSPYLFNFH 460 Query: 472 FRGMNNTN----------YNMAVCGTSGAGKTGLIQPLIRSVLDS-GGFAVVFDMGDGYK 520 + + + + + G +GAGKT LI L+ S L + D +G Sbjct: 461 NQEVKHKGVLAHNVARVVGHTMIIGATGAGKTTLISYLMMSALKYSNIDILALDRLNGLY 520 Query: 521 SLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQLSVMAS----PNGNLDEVHEGLL 576 S + G+Y GE NPF+ + D + + + MA + L Sbjct: 521 SFTKYFDGIYNQGENFHINPFS-LEDSATNRAFLLHFYAQMAKVDSYDDHKDKVEDRTAL 579 Query: 577 LQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYG 636 L A+ + + + + + + +++ D + + Y + Sbjct: 580 LNAIDTMYRNYNDEVKQAKFSNQELPLPFDLKEFVNSIVKTNTDILDSSFEDYLKSS--- 636 Query: 637 QYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVID 696 F+S SL ++ + + + + + + +R + R L ID Sbjct: 637 -LFSSRMDSLDFKTRISTINTDSILHNDDDAGLLAYYVFHKMIDRALKINRG--FLCFID 693 Query: 697 EGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYK 756 E +N + + I + AR+ G + Q+I A++ N Sbjct: 694 EFKSY--AQNEMMNKKINEIITQARKANGVIVLALQDINQLSEV---RNAQSFIKNMGQL 748 Query: 757 IILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLL-QVENHSSWHRLFVD 815 I+ Q + N + + ++ + + + L + S+ + + Sbjct: 749 ILYPQRNIDTKDLNDKFGIRLSDTEKHFLENTAVNE---YKVLLKNMNDGSSNIIDVSLS 805 Query: 816 PL--SRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEAWLE 866 L ++SS+ E + K V+ ++ + LE L+ Sbjct: 806 SLGNYLQIFSSNSSMVEHIDNLIKHYPKTWREVFVSNKHENFDDKKHLEKVLK 858 >UniRef50_Q73FZ8 Type IV secretion system protein VirB4, putative n=12 Tax=Wolbachia RepID=Q73FZ8_WOLPM Length = 788 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 93/829 (11%), Positives = 249/829 (30%), Gaps = 92/829 (11%) Query: 42 RLLPYRDYNQESGLFMNDTTMGFMLEAIPINGANE--SIVEALDHMLRTKLPRGIPLCIH 99 +PY + E + + +++ + + + + + + Sbjct: 31 DFVPYACHYDEETILTKQGELLKIIKLEDYSSVDNYSDLRTEIRKSISKNINSLCFTVWI 90 Query: 100 LMSSQLVGDRIEYGLREFSWSGEQAERFNAITRA--YYMKAAATQFPLPEGMNLPLTLRH 157 + +++ E + FN +T + Y+ + Sbjct: 91 HTVRKRNKLSLKWNKTEDFSDNLHSTWFNKLTDSKLQYINELYIVILFSDFGKHTNNSFF 150 Query: 158 YRVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQ---AFIDIVGEMIN 214 + + S ++S ++ ++ ++++ ++ + + + I+ + ++ Sbjct: 151 FNRIKNKHKLSLQESHQELQKITDVIQNDLGPFGAKKLSLRFSEGKIYSEMIEFLHYIVT 210 Query: 215 HNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFHLARN 274 +Y E +R + G + + Sbjct: 211 LTHK---------------DYPIHERDLSQYIRNFKIAFGFNTFQTIFENQ------QKF 249 Query: 275 PEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSY 334 I + + ++ L + FI+T ++ K E + L+ ++ Sbjct: 250 GSIFSIKEYREISLGNIDRCLQLESEFIITEIMIFTSNNKAIKEFKKQINMLQISEDSTL 309 Query: 335 AKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN 394 K E+ + + + T F D N+ E D+ + Sbjct: 310 LKSS--------GIEEIIELEKTSSIDFCQQKIIFTIFADDRNK-LAESISDLSSIMSLV 360 Query: 395 GFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVA--DNPLT 452 GF + + +F LP + A SF + + Sbjct: 361 GFMMFRTDLHMESHFWAQLPGNFAFITQPKNILTKY---ACSFAMLHDFTSGTLKGRRWK 417 Query: 453 PAGLLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVV 512 A ++ + + F + R N + + G +G+T LI L+ V+ Sbjct: 418 EAVMIFFSKKGNPYFFNFHGR---RNNGHTTILGAPNSGRTSLINFLLSESRKFNPRIVI 474 Query: 513 FDMGDGYKSLCENMGGVY------LDGETLRFNPFANITDIDQSAERVRDQLSVMASPNG 566 D + + G Y ++L+FNP NI D + + + + M + Sbjct: 475 LDNTGKSIIFTKAVSGKYYIIDPKYKDKSLKFNPL-NIEDSASNRNMLVELIRRMVADTS 533 Query: 567 NLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLL 626 +D + + + V + + + I + + L + + Sbjct: 534 LVDVEEK--IRKIVDSIFAIPKESRSISQISEVLL-------------------LLGGKI 572 Query: 627 DQYTANGTYGQYF-NSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRT 685 ++ +G + F + DE + + K++ L L + + +++ + E + Sbjct: 573 SRWCDDGDFAYLFQDGDESDIDWETKIISLNTANLTKQKECMSVILYYFLYSFEAKC--- 629 Query: 686 PRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSA 745 + V+DE W + + + + + I T+N+ + K + Sbjct: 630 -DGSPAILVLDEAWEISNI--FPTEKEFDNWMQRMTELNVVVILSTENLNLAFASKFTQY 686 Query: 746 ARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVEN 805 +I++ +LY F + ++ + FL++ Sbjct: 687 LDKHV---DTRILMPNVNAN-----RLYMKAFSLSKEELNIILQTPTQEGL--FLIKQYK 736 Query: 806 HSSWHRLFV-DPLSRAMYSSDGPDFEFV-QQKRKEGLSIHEAVWQLAWK 852 L + D + S++ +++ + +++G ++E + K Sbjct: 737 GLVTLNLDLKDMQEIHVLSANKETIKYMYEAIKEKGEEVNEWLPVFYEK 785 >UniRef50_B9LVJ9 Conjugation protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVJ9_HALLT Length = 1085 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 117/866 (13%), Positives = 252/866 (29%), Gaps = 139/866 (16%) Query: 102 SSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNL---------- 151 S ++ ++ + + + R YY+ A + + Sbjct: 197 SRPVLKRLLDEYITTNTDQNGDIDSEATTIREYYIITAVRDADVEQLNETGDSVLAYLAD 256 Query: 152 -PLTLRHYRVFISYCSPSKKKSRADILEMENLVKIIRASLQG-ASITTQTVDAQAFIDIV 209 P+ R + F S ++ R ++E+ + +R + VDA + Sbjct: 257 IPVLGRVFGRFQSDGLSDAERDRLKEDKLESRLGQLRRGGSSLYRCSMSPVDAYDLTRVT 316 Query: 210 GEMINHNPDSL------------------------YPKRRQLDPYSDLNYQCVEDSF--- 242 E + + +D D + D Sbjct: 317 KEYWTGHTEEYGEITDAIGTFPVVAHGISDDVPTTPDPDDVVDAMDDSGEETGSDDTADV 376 Query: 243 -------------DLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSN 289 + + N + F + + PE Sbjct: 377 SAADRLDDTSTLHQSVIAPSTVDWEATHAVINDDTYVRTFWIEQFPEEPADGIFERL--- 433 Query: 290 LLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWG 349 L +++ L D DL+ S + ++K+ Sbjct: 434 ----LLETDLNTDISIHLDPFDSQSAEDMMADWISDLKVNQHDSNSLKAEDLQKDIDRGK 489 Query: 350 ELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNSFRKN--GFELISPRFNHMR 407 +R + + ++S + I ++ + + + + L + Sbjct: 490 FMRSLVRANKASFYRGGVFIRL-SAESKQELDTQTTRLRSIVKDAPANCTLKVANRWQEK 548 Query: 408 NFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAP--TYRNQL 465 T P A + + + V + P ++ + G+ + Sbjct: 549 GLATVSPLGANELGRD------RMSTLTNQAVGAMFPFSSNYMMMDEGVEYGYHGHNGSP 602 Query: 466 AFIDIFFRGMNNTNYNMAVCGTSGAGKTG--LIQPLIRSVLDSGGFAVVFDMGDGYKSLC 523 I+ + T ++ V G GAGKT +++ L V+ D G+K + Sbjct: 603 VQINPWDLE---TGHSELVVGMPGAGKTFGDIMRHLRMMKRQQDTMLVMIDPVGGFKGIA 659 Query: 524 ENMGGVYLD-GETLRFNPFANITDIDQ-------------SAERVRDQLSVMASPNGNLD 569 + + + G + NP + + V L + Sbjct: 660 DALNAKTISVGGDTQLNPLEIRETPQEVLDADDGISPLSAKKDEVYAVLENFLTARDIDL 719 Query: 570 EVHEGLLLQAVRASWL------------AKENRARIDDVVDFLKNASDSEQY-------A 610 G+L + ++ EN + D+ L + +++ + Sbjct: 720 GTETGVLSYVIDETYRQAGVVEDDVTTHTPENSPTMTDIHRILADIAENPDEHNIAASES 779 Query: 611 ESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDE-PSLRDDAKMVVLELGGLEDRP---SL 666 + DE+ + + G+Y E L D K+V ++LG +E Sbjct: 780 ARERAAAYADELAIAFQPFREGGSYDNLAERSEVDILEGDNKVVYIDLGQIEGSASGIDR 839 Query: 667 LVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGA 726 +M L+ + + +T RN++ IDE L F++ +F+E +R R Sbjct: 840 QTFLMQLLLSTVYQQAKKTDRNVE--LAIDEAHYL--FEDQANLDFLETAFRHQRHAGLR 895 Query: 727 YITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIG 786 + ++Q +F + A G K+ K + +++ QR + Sbjct: 896 MVLLSQTAQEFYE---TDQAEKILGMCPIKVFHKLPDLDDETADKI---GLTREQRQYVR 949 Query: 787 KFGAAK-DQWFSSFLLQV-ENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 A K D +S L++V E+ + + DP + + + D EF+QQ E Sbjct: 950 GADAGKEDLGYSQALVRVEEHGTYPLHIVADPFEKRVIDYEPADQEFIQQAISE------ 1003 Query: 845 AVWQLAWKKSGPEMASLEAWLEEHEK 870 E+ +A++E + Sbjct: 1004 ---------QSEELVDFDAFVENEAQ 1020 >UniRef50_B1BPA3 Putative uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BPA3_CLOPE Length = 632 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 79/607 (13%), Positives = 194/607 (31%), Gaps = 60/607 (9%) Query: 248 ADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTL 307 + ++ G ++ M E+ I+TL + Sbjct: 11 NPFFINEIQPCGGIKGEENKLIKGDGYETCINIYKMPTEVDEFWLKEIMGLENAIVTLDI 70 Query: 308 VVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSV-EKEAKEWGELRQRLGSGQSSVVSYF 366 ED++K + + + + K++ ++ +KE + L++ + + + Sbjct: 71 ATEDKMKARQKIRVAIQEQVSRFKSTNDSEEQTLAKKEYQNMKALQELVLDNGEVMKLFK 130 Query: 367 LNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLK 426 + I F ++ ++ E +++++ + + ++ + + ++ Sbjct: 131 IRIYLFDRERSK-LEERVKEVVSELESHNYGCAINLNELELDYKSIF---SSYKSQQKYS 186 Query: 427 EAGVVQRAESFNVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNYNMAVC 485 A S ++ MP + P GL T D+F + +YN Sbjct: 187 NKRKWNGAPSLSLGASMPFHYTSLDDPYGLFLGSTATGGSVIWDLFHNDEDRLSYNFLFV 246 Query: 486 GTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGV--YLDGETLRFNPFAN 543 G G+GK+ ++ + + + D+ ++ + + +GG YLDG NP Sbjct: 247 GKQGSGKSSALKKIFLNNDILDNTIRILDLTGEFEEVVKELGGKEVYLDGSGGIINPLQI 306 Query: 544 ITD-IDQSAERVRD------QLSVMASPNGNL----DEVHEGLLLQAVRASWLAKE---- 588 I++ V + +S + G L + + + + Sbjct: 307 YPTIINEKTNEVLEEQCYTCHISKLNMIYGFLSPNSTDDEKKEFGLLLNRFYKKFGIERN 366 Query: 589 --------NRARIDDVVDFLKN------ASDSEQYAESPTIRSRLDEMIVLLDQYTANGT 634 + D + F+++ P+ +RLD + + ++ N Sbjct: 367 KATRYKAKDYPIFSDFLKFIESELYIDVEKKIVDNTILPSRITRLDSIKLTIEDLVEN-- 424 Query: 635 YGQYFNSDEPSLR-DDAKMVVLELGGLED-RPSLLVAVMFSLIIYIENRMYRTPRN---- 688 +G FN ++ + + ++ +FS++ I + R Sbjct: 425 FGDLFNGYSNIEDVTKENLISYNFKNISQYDERIFISQLFSVLTSIWGQALVQGRREKEK 484 Query: 689 -----------LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDF 737 K L +IDE ++ + + +I + R R++ +I D+ Sbjct: 485 YDSGEVGIEDVKKFLILIDEAHVCINPRKIEAVRYINRMLREDRKYFTGVGFANHSINDY 544 Query: 738 DSDKASS----AARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 + S + + YK ++KQ + +++ Q D + F Sbjct: 545 VPENVSDAELSEIKKIFSLCQYKFLMKQGIENKENIKKIFASTISDKQIDNVVDFQKGDA 604 Query: 794 QWFSSFL 800 F + Sbjct: 605 IMFIDGM 611 >UniRef50_B4WVR3 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WVR3_9SYNE Length = 951 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 117/933 (12%), Positives = 259/933 (27%), Gaps = 121/933 (12%) Query: 17 TALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDTTMGFMLEAIPINGA-- 74 ++KLP + + + + R LP + + + L N F + + + Sbjct: 8 GSIKLPGGKKLKDRIEDHIQLEDYVRFLPLKG-DVGAALQSNGQDYQFKFGFMVESFSPN 66 Query: 75 -----NESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS--------- 120 ++ VE L + L++ +P + R++Y + + Sbjct: 67 ESEEQFDTAVEYLQNALKS-IPDNESMTFIQSVVPDNKPRLQYFGDLYRKAPSPLFAEMV 125 Query: 121 -----------GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPS- 168 E + R+ Y + T + T FI + Sbjct: 126 KSAASPGEYFINMGLEDRVNLARSKYKRKTLTIYVTATSTQSAFTKDKSEAFIKKGIETV 185 Query: 169 --------KKKSRADILEMENLVKIIRAS-------LQGASITTQTVDAQAFIDIVGEMI 213 + R ++ L +A L + + +A ++ Sbjct: 186 AGVWEKITGEAVREQSEQIIELFTNAQAIYEDWVNVLDQMQLPVTPMSVEALVNEQWREF 245 Query: 214 NHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNS------TARIL 267 N P P+ + D L+YQ ED L + R+ + Sbjct: 246 NDTPVRPIPQIMEWD-GERLHYQM-EDDIHLTSWLFERQSNVPRAKRDYVYQTKLDGKQR 303 Query: 268 NFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLE 327 + W + L + + + TL ++ + + Sbjct: 304 VTGIVTLRNKPSGWKSPKHALKYLYDKTRGLHDYKIVFTLTKASRMIAEKNVEMLQRQAQ 363 Query: 328 KKSKTSYAKWFPSVEKE--AKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQ 385 + + PS + E + L SG + + + + + Sbjct: 364 DAISLANKRGLPSTRSKSLQAEAEAAAEALYSGNIPMRMSLC--FLVSARSKKELNILCR 421 Query: 386 DILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPL 445 +++ F L + +L C P ++ K + ++ +P+ Sbjct: 422 RLVSKFPSP-ATLEIEQDYTPLTWLQCFPQLSYK--RPLFSPYDRTRSFNVSSIPAFLPI 478 Query: 446 VADNPLTPAGLLAPTY-RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVL 504 V GL T ++DI ++ + AGK+ L ++ + Sbjct: 479 VKATSPDTKGLEFVTEDEGTPFYLDIINVQ-----RHILFLAKTRAGKSVLFSFILLIAM 533 Query: 505 DSGGFAVVFDMGDG-----YKSLCENMG--GVYLDGETLRFNPFANITDIDQSAERVRD- 556 S VV D + + + G G YL+ N S E + + Sbjct: 534 CSQVPMVVVDYPKEDGNSTFGPIAKLAGEHGAYLNIAEEANNFLELPDLSAFSGEALENR 593 Query: 557 -----------QLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDD-VVDFLKNAS 604 + +M PN + + + + I+ + Sbjct: 594 MIATKDYVLDLLMIIMFGPNASDGDQEKRTARDILSNLMNRFYRMPDINRRFQAAIGAKI 653 Query: 605 DSEQYAESPTIRS-----------------------RLDEMIVLLDQYTANGTYGQYFNS 641 S ++ + PT+ ++E+ + + S Sbjct: 654 GSPEWRDVPTLHDFTKLCTESTLKEFTETVAPEHIKLINEIRLRYSAFVETTVGRSL--S 711 Query: 642 DEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRL 701 S+ DA ++V G+ V + M RT + +DE L Sbjct: 712 QPTSIPRDANLLVFAFKGISSNDDAAVLMA----SAAAAAMRRTLSAPVSILFMDEASIL 767 Query: 702 LDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ 761 F + + E I K + + Q S N K+I + Sbjct: 768 SKFDS--LMEQIAKIAANGFKSGIRLMMALQTPASIAK---SRFGDEILANIGTKVIGRI 822 Query: 762 SAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAM 821 + Y ++ ++++ KF + +S +++ + ++ R + PL A Sbjct: 823 EPGDAKHYTRILDIPSEYIRQNASKKFFPKIAELYSRWMIIDNDDITFVRSYAPPLLLAA 882 Query: 822 YSSDGPDFEFVQQKRKEGLS-IHEAVWQLAWKK 853 +++ + + A+ + A + Sbjct: 883 VANNPEEEVAKEAFLAAYPDNPTRALQEFAKEF 915 >UniRef50_C6RJZ9 Putative type IV secretion system protein VirB4 n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJZ9_ACIRA Length = 903 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 116/831 (13%), Positives = 252/831 (30%), Gaps = 102/831 (12%) Query: 44 LPYRDYNQESGLFMNDTTMGFMLEAIPINGAN-----ESIVEALDHMLRTKLPRGIPLCI 98 LPY + + + + +L+ +++ + +L + + Sbjct: 128 LPYLTPIDSHNIKLVNGDIFTILKITGFAYETKSYEQLKMLKRYRAEMFKQLGSRFVVSV 187 Query: 99 HLMSSQLVGDRIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHY 158 + ++ + E EFS +++ +M L P Sbjct: 188 YYDRHEVETEIPEPHGNEFS--DHFQQKYYEKLSQEHMFQNDIYISLLVRKANPSEPPFT 245 Query: 159 RVFISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDA--------QAFIDIVG 210 R+ ++ + E+ N V + + LQ A + + ++ +G Sbjct: 246 RLKNTFFR--VDNEAQMLAELSNAVSMFKEYLQDA--NPRQLGVYHKDNVMYSEAVNFLG 301 Query: 211 EMINHNPDSLYPKRRQLDPYSDLNYQCVEDSFDLKVRADYLTLGLRENGRNSTARILNFH 270 M+N + ++ Y + +K +G + I + Sbjct: 302 YMVNLERAEIPLYPTEIRNYLGFVRKVFTPDGTIKFY--------HPSGEVTAGAIYSLP 353 Query: 271 LARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSEANLKYMDLEKKS 330 PE +L+ L + P +++ T ++ D+ K+ + + + L+ Sbjct: 354 TPNYPE--------HTDHTMLDEFLKVDHPLLISQTFMMMDRRKSINMSIQRQNQLKNAK 405 Query: 331 KTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITAFCKDNNETALEVEQDILNS 390 S E + + + L SG+ Y LN+ K+ + Q + Sbjct: 406 DKS--------ESQIEAINQAVDDLASGRILNGIYSLNVLVTAKNGA-AFKDAMQKTSGA 456 Query: 391 FRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESFNVANLMPLVADNP 450 F++N F + L + N A + + Sbjct: 457 FQRNHMLPKKEDLIAEPTFYSTLIGNYHL--------LQRPATINTTNFAGFASMHNSSI 508 Query: 451 LTPAG-------LLAPTYRNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSV 503 G L T N + + + +T G T LI L+ + Sbjct: 509 GKKEGNHWGEYVLQLKTEGNTPYYFNFHEGDVGHTRITTGTGGGK----TTLINALLTAA 564 Query: 504 LDSGGFAVVFDMGDGYKSLCENMGGVYL---DGETLRFNPFANITDIDQSAERVRDQLSV 560 + FD + MGG + + +NP + D DQ+ + + Sbjct: 565 DKFKPYIFHFDFEYSASVWIQAMGGKHTVLSEMVPTGWNPLQ-LDDTDQNRLFLNKLFAF 623 Query: 561 M------ASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPT 614 M A L E + + V A + ++ R+ + + A + Sbjct: 624 MGQDYNEAGNPKPLSAAEENKIKEVVEAVYSYEKTLRRLRNFISLFGMAEN--------- 674 Query: 615 IRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLEDRPSLLVAVMFS 673 + + + ++ NG + F+++ + DA++ E+ + +L A+ Sbjct: 675 -----NNLAERMAKWANNGHFANIFDNEGDNFSIEDARIFGYEMKNVIKNDVVLGAMSMY 729 Query: 674 LIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQN 733 + I+ M + V++EG R + N +++ T RR G I +T Sbjct: 730 IFHRIDIAMS---EGRPFIVVVEEGQRYIS--NPINLAWLKIMLTTYRRRNGMMIFVTPT 784 Query: 734 IVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKD 793 D G I+L A Y + L + Sbjct: 785 PEVITKD------DDLIGQFKTSILLPNDKANPATYMGNDQNSGLGCTQTEFEWIVNTPP 838 Query: 794 QWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHE 844 + F+++ + S +L + +S + G + + +E LS +E Sbjct: 839 -YLRQFMIKNSHDSVISKLDLGNMSEIIPVFSGNEV--RHKMLEETLSKNE 886 >UniRef50_B0FYU0 TrsE n=6 Tax=Staphylococcus aureus RepID=B0FYU0_STAAU Length = 672 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 92/666 (13%), Positives = 212/666 (31%), Gaps = 90/666 (13%) Query: 253 LGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQ 312 + + + I + P+ L+ L + +T + + Sbjct: 44 IEKKSHIETGENYIKTLLVVDYPQSVK--------GAYLSNLLKKNGNIQITKFIRPANI 95 Query: 313 VKTHSEANLKYMDLE-KKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA 371 + N + + ++ +T+ K ++++E + E + ++ + ++ IT Sbjct: 96 ERMIDHLNNSIKNKKAEQMRTTDPKRNATIKREIESSKEQLDKFLDEKTGFMYMYMYITL 155 Query: 372 FCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVV 431 D+ E +E+D+ + + + +P +F T LP + A Sbjct: 156 -NGDSYEKIQALEKDVKRTLTRLRLKTHTPTNAMRESFHTVLPLN------RNFLSAFTQ 208 Query: 432 QRAESFNVANLMPLVADNPLT--PAGLLAPTYRNQ--LAFIDIFFRGMNNTNYNMAVCGT 487 Q ++ + + P + +N L +D F N NM + GT Sbjct: 209 QNMDTATAGHFFMFDDSEIIDLTPNTSVFGINKNTDSLVAVD-FNNKEKTLNKNMTIIGT 267 Query: 488 SGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLD---GETLRFNPFANI 544 SG GK+ L +I + + D D + + + GG ++ ++ NPF Sbjct: 268 SGVGKSTLNMRMILDNVKKSIRQFIIDPEDEFSYITKYYGGTVVNISTSSNIKINPFEIF 327 Query: 545 TDI--------------------DQSAERVRDQL--------SVMASPNGNLDEVHEGLL 576 ++ ++ ++ + + + + +L Sbjct: 328 SEEVFEKEDETDNETTSDVLTENNEQESQIDTLVRSKIGKLKTFFRVLKDEISQTEISVL 387 Query: 577 LQAVRASWLAKE-------------NRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMI 623 +R + K + + ++ + LK+ P L ++ Sbjct: 388 SSTLRQLYQDKGFKGNAKLSDFKSEDYPTLTELYNKLKDLD--------PEKYEVLKDLT 439 Query: 624 VLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMY 683 ++++ YT F+ +++ D ++V L L+ + A ++ ++ + + Sbjct: 440 LIIEDYTMEHGTTTIFDG-YTNIKLDNEIVTFNLKPLQTEKDVQSAAYLNIFSFLWDEIT 498 Query: 684 RTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITITQNIVDFDSDKAS 743 + R + + + DE L N +F + Y+ R++ G I TQ I D Sbjct: 499 K-DRTTETVLMTDELHFL--ATNEYSLDFYYQAYKRIRKYGGGAIASTQQIKDILRTSQ- 554 Query: 744 SAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQRDMIGKFGAAKDQWFSSFLLQV 803 A NS K +F + + K LL Sbjct: 555 EIGSAIIENSHTKFFFGMDNVGVDDVVDKLGLKFSDQEISHLTKKKKG------EALLLY 608 Query: 804 ENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGLSIHEAVWQLAWKKSGPEMASLEA 863 ++ R+ +D ++ + E + +E + +A LE Sbjct: 609 GTQRAFIRIDLDREETRLW-----NKELYETIYEESADKEPNYVEQLGLSDID-LAELEE 662 Query: 864 WLEEHE 869 L + E Sbjct: 663 ELRQAE 668 >UniRef50_C8WSW7 Type IV secretory pathway VirB4 protein-like protein n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WSW7_ALIAD Length = 802 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 113/834 (13%), Positives = 245/834 (29%), Gaps = 99/834 (11%) Query: 52 ESGLFMNDTTMGF-MLEAIPINGANESI----VEALDHMLRTKLPRGIPLCIHLMSSQLV 106 E+GL ++D + + G +ES+ + AL+ LR + + L S Sbjct: 4 ENGLVVDDQGRAYGVFIVSQQAGVSESMERAQISALERGLREVVGEWWVFSLALGLSPSA 63 Query: 107 GD-RIEYGLREFSWSGEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVF---- 161 D R+ G + + + + PL L L L R F Sbjct: 64 WDARLPRGAHPLWQAHRKEAEAALQNELPFERKVYLVVPLDSLRILELGLSTIRQFGKTV 123 Query: 162 -----------ISYCSPSKKKSRADILEMENLVKIIRASLQGASITTQTVDAQAFIDIVG 210 ++ P+ + + + E K + + + + Sbjct: 124 TQDVWRGVRDALAVVWPTSEVTLDQLARWERERKRKAQAFSSF-LPIRPATLREIEAWWR 182 Query: 211 EMINHNPDSLYPKRRQLDPYSDL------------NYQCVEDSFDLKVRADYLTLGLREN 258 + L +L Q + + RA +L L + Sbjct: 183 ---HGAHRGLIEPDSRLPQGLPKVVSASGVVHVAYPLQTLLQEAAFRERAFHLEGELPDG 239 Query: 259 GRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILTLTLVVEDQVKTHSE 318 + R + + + P + L + VED Sbjct: 240 RKTYQTFFAMLRAPR-----EIPADNPVGHEWIYAAELLDYPVDIALHIRVEDSRSALRH 294 Query: 319 ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVVSYFLNITA-FCKDNN 377 + K E + + + + + +E + + + + + + + Sbjct: 295 LSRKKGIAEAQLEEYESAGEEAPLELLEELDTTAELERNLRFAGSLVHVKMIVGLGAPDE 354 Query: 378 ETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKGLFKQLKEAGVVQRAESF 437 +T + + + +L+ + R + P+ + + ++ Sbjct: 355 DTLRQRAKRLPTDLG--DIQLVQAPGDQQRFWQAFYPWG-------RGVQTAYEIPMDAG 405 Query: 438 NVANLMPLVADNPLTPAGLLAP-TYRNQLAFIDIFFRGMNNTNY-NMAVCGTSGAGKTGL 495 A +P P G+L T + F D ++ +CGT G+GKT Sbjct: 406 LFAAALPFATQGFGDPRGMLLGETNLGRPVFFDPRRPAQELDRPPSVLICGTLGSGKTVT 465 Query: 496 IQPLIRSVLDSGGFAVVFDMGD-GYKSLCENMGG-----VYLDGETLRFNPFANITDIDQ 549 + +L G V D Y L + E NP + Sbjct: 466 TAFITAMLLAQGARVFVQDPKGHDYDGLAQLPNIRSRFLRMTPDEGTPINPCRLGVPGAE 525 Query: 550 SAERVRDQLSVMASP--NGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSE 607 R L ++ + + N+ ++ L+ +AV A A + D + D Sbjct: 526 -----RGVLDILLNDTTDPNVRDLRSILIGRAVSAMHKAGGKQ----DFWAIAEAIEDMV 576 Query: 608 QYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLE----- 661 + + P R + + ++ LD + + G+ +++ + D + V+ GL Sbjct: 577 RREKRPVYREQGELLLERLDALSKD-ALGRLLFAEDDGMTPRDYDLTVVATNGLSLPGAN 635 Query: 662 ----DRPSLLVAVMFSLIIYI-ENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKG 716 + + +F + P+++ K+ V+DE W+L F + +++ Sbjct: 636 STVWNEQERVSVALFYAAATMGLGYFSGLPKDVVKVLVLDEAWQLRRF--PAGRDLVDRL 693 Query: 717 YRTARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQ-SAKEFAKYNQLYPD 775 R +R + + QN DF+ + G S++ ++Q S E A ++ Sbjct: 694 LRVSRSLNIIPLMLMQNATDFE-----QFGESITGLFSWRFCMRQLSRPEVAASLRILNL 748 Query: 776 QFLPLQRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFV---DPLSRAMYSSDG 826 + R+ V + + S+ Sbjct: 749 PDDEAAEWE----KTFGGLASGEAMAMDAEG-RVARIQVILRPSWLKELLSTTP 797 >UniRef50_C7CWC1 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7CWC1_ENTFA Length = 643 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 88/643 (13%), Positives = 209/643 (32%), Gaps = 84/643 (13%) Query: 245 KVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCPFILT 304 ++ R H+ P I + + + S + Sbjct: 18 TQPKGGISFKEDFYNRMGDGYRTCIHVIDTPTIMSEFWLLEITS----------LENSIV 67 Query: 305 LTLVVEDQVKTHSE-ANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQSSVV 363 + D + + + +L+ + K + + E + L +G + Sbjct: 68 MVDTRLDGDIAYKKGISDTIGELKTRMKKATETEQDDLANEIEILRTLSFEMGQQGEQIK 127 Query: 364 SYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTC-LPFMAGKGLF 422 + I + E + +L + +G++ + + LP + L Sbjct: 128 KVAIRIFL-SQPTLEALEKQVNIVLGTLNSDGYDGTVLLGEQKEEWQSMFLPLSEQRKLR 186 Query: 423 KQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNYNM 482 + + + A ++ ++D G T + + D+FF+ YN+ Sbjct: 187 NRREGMDIQAEALGLGFSHNQTFLSDETGFYYGF---TQTGGVVYWDLFFKSKKRLYYNL 243 Query: 483 AVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYL--DGETLRFNP 540 + G G+GK+ +++ ++R G + FD + ++ + GG+ + DG+ N Sbjct: 244 FLAGDMGSGKSTILKKILRDNAAKGHYIRGFDKSGEFFNIVKEYGGISIPLDGQRGVINM 303 Query: 541 FANIT--------DIDQSAERVRDQLSVMASPNGNL--------DEVHEGLLLQAVRASW 584 F D D+ +R S G L + + V + Sbjct: 304 FQVYPLVSKDSENDSDEVEVDIRGSFVQHISMLGILFKIRNKAATDELVSIYEDIVWDFF 363 Query: 585 LAKEN----------------RARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQ 628 D +++L+ ++ + L ++ + + Sbjct: 364 TDFGIWKEDASIDITSLPNEAYPTCTDFMNYLEKVEETIDEER----KGYLQKIKITMKP 419 Query: 629 YTANGTYGQYFNSDEPSLRD-DAKMVVLELGGLED-RPSLLVAVMFSLIIYIENRMYRTP 686 T Y F+ D ++V ++ G+ + + +F + +I + R Sbjct: 420 LTK--QYKHIFDGKTSVPDLGDNQIVFFDIAGISQLGSEIFDSQLFIALNHIMGNITRIG 477 Query: 687 RN---------------LKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTARRHTGAYITIT 731 + ++ L V+DE +L+ + ++ AR++ T Sbjct: 478 KREKGYFDRNEKDWWDIIRCLVVVDECHNILNIEKAYAAKWFVTLMSEARKYFTGIALAT 537 Query: 732 Q----------NIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPLQ 781 Q N D D+ +A++ + +G + YKI+LKQ + +++ + F + Sbjct: 538 QRVQRMFPNADNAQDKDTVEAANKLKEIFGLTQYKILLKQDSTSIGFLKKIFGNTFTETE 597 Query: 782 RDMIGKFGAAKDQWFSSFLLQVENHSSW-HRLFVDPLSRAMYS 823 ++I F +K+ S +L + + V A+++ Sbjct: 598 YNLIPAFETSKEVGGSQGILSISGDQNIQMTFQVTEEELALFN 640 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.123 0.281 Lambda K H 0.267 0.0379 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,548,407,091 Number of Sequences: 3077464 Number of extensions: 127456015 Number of successful extensions: 584377 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1292 Number of HSP's successfully gapped in prelim test: 2357 Number of HSP's that attempted gapping in prelim test: 575029 Number of HSP's gapped (non-prelim): 5731 length of query: 875 length of database: 1,040,396,356 effective HSP length: 138 effective length of query: 737 effective length of database: 615,706,324 effective search space: 453775560788 effective search space used: 453775560788 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 97 (42.1 bits)