322 c1rr2A_ Probab=71.36   E-value=8.1  Score=19.03  Aligned_columns=205  Identities=12%

Q ss_pred             HHHHHHHHHCCCCEEEHHHHHHH----HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHEECCHHHHHHCCCCEEEEEEEE
Q ss_conf             99999997137565600001564----21000255464499960578467888770014335899963487589999863
Q batch____        95 KNIVELAIEAGCNCVASTYGVLA----SVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYF  170 (350)
Q Consensus        95 ~~~i~~aieaG~na~l~~~Gm~~----~~~~~y~~~i~lIvkln~~tsL~~p~~~~k~Lv~SVEeAvRLGADAVsv~vy~  170 (350)
                      +..++.+.+.|.+-+-..-.+-.    .-.-.++.+.++.+..+-+.+.+ +.-+.+-+..-+++++.+|||-|.+-=-.
T Consensus       107 ~~~i~~a~~~gi~~~ri~~~l~~i~~~~~~v~~ak~~G~~v~~~i~~~~~-~~~~~e~~~~~~~~l~e~Gad~I~l~DT~  185 (472)
T c1rr2A_         107 DRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTIS-PVHTVEGYVKLAGQLLDMGADSIALKDMA  185 (472)
T ss_dssp             HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCC-TTCCHHHHHHHHHHHHHTTCSEEEEEETT
T ss_pred             HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC-CCCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             99999887469987985364659999999999999869859999996038-89998999999999997599889972853


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Q ss_conf             78326999999999999998739948999812676667555633234899999999898747776876368885677887
Q batch____       171 GSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAI  250 (350)
Q Consensus       171 GSe~E~~mL~dlg~Vaeea~~~GmPlia~~YPRG~~i~~~~~d~e~dpdlia~AaRiAaELGADIVKv~Ytg~~es~~~v  250 (350)
                      |.-...+..+-+.++.+.-. -.+|+-.+.              +.+..+---.+=.|.+-|||+|-+-..|        
T Consensus       186 G~~~P~~v~~lv~~lr~~~~-~di~i~~H~--------------Hnd~GlAvAN~LaAi~aGad~vD~si~g--------  242 (472)
T c1rr2A_         186 ALLKPQPAYDIIKAIKDTYG-QKTQINLHC--------------HSTTGVTEVSLMKAIEAGVDVVDTAISS--------  242 (472)
T ss_dssp             CCCCHHHHHHHHHHHHHHHC-TTCCEEEEE--------------BCTTSCHHHHHHHHHHTTCSEEEEBCGG--------
T ss_pred             CCCCHHHHHHHHHHHHHHCC-CCCEEEEEC--------------CCCCCHHHHHHHHHHHCCCCEEEECCCC--------
T ss_conf             56898999999999998528-788899981--------------1885559999999997058687623411--------


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCHH
Q ss_conf             51135433333344555543100111101347830898077878968999999999988532864488400112167614
Q batch____       251 NYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMAD  330 (350)
Q Consensus       251 v~~~~~~~~~~~~~~~~~~~~~~~v~~~c~A~~~pViiaGG~k~~~~d~l~~v~~ai~al~AGA~GVaiGRNVFQ~~~pd  330 (350)
                                  .-+...+++.+.++..+   .--=+-.|=-...-.++.++++.+...-..=.+...++-|+|+|+.|-
T Consensus       243 ------------lG~~~Gn~~~E~lv~~L---~~~g~~tgiD~~~l~~is~~~~~i~~~y~~~~~~~~~~~~v~~h~~PG  307 (472)
T c1rr2A_         243 ------------MSLGPGHNPTESVAEML---EGTGYTTNLDYDRLHKIRDHFKAIRPKYKKFESKTLVDTSIFKSQIPG  307 (472)
T ss_dssp             ------------GCSTTSBCBHHHHHHTT---TTTTEECCCCHHHHHHHHHHHHHHGGGGGGGCCSCSCCCTHHHHCCCH
T ss_pred             ------------CCCCCCCCCHHHHHHHH---HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             ------------28787872389999999---718898877889999999999999853246886655476654565871


Q ss_pred             HHHHHHHHHH
Q ss_conf             8999999998
Q batch____       331 GVKLINAVQD  340 (350)
Q Consensus       331 ~v~l~~Ai~~  340 (350)
                      +  |+..+..
T Consensus       308 G--~~snl~~  315 (472)
T c1rr2A_         308 G--MLSNMES  315 (472)
T ss_dssp             H--HHHHHHH
T ss_pred             C--HHHHHHH
T ss_conf             1--4888999