Phyre 2 alignment of P27375 with c2wl2B_

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Job Description | P27375
Confidence | 3.62% | Date | Thu Jan 5 11:43:57 GMT 2012
Rank | 24 | Aligned Residues | 22
% Identity | 27% | Template | c2wl2B_
PDB info | PDB header:isomerase | Chain: B: PDB Molecule:dna gyrase subunit a; | PDBTitle: crystal structure of n-terminal domain of gyra with the2 antibiotic simocyclinone d8
Resolution | 2.62 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Query Sequence |  | Y | N | L | A | . | . | . | . | R | T | H | L | K | R | T | I | L | A | L | . | . | P | E | S | N | V | I | H | A
Query Conservation |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . | . | . |  |  | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | A | M | S | V | I | V | G | R | A | . | L | P | D | V | R | D | G | L | K | P | V | H | R | R | V | L | Y | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | S |  | B | T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 24 | . | . | . | . | . | 30 | . | . | . |  | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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