Phyre 2 alignment of P27375 with d1h6pa_

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Job Description | P27375
Confidence | 2.06% | Date | Thu Jan 5 11:43:57 GMT 2012
Rank | 94 | Aligned Residues | 25
% Identity | 28% | Template | d1h6pa_
SCOP info | Telomeric repeat binding factor (TRF) dimerisation domain | Telomeric repeat binding factor (TRF) dimerisation domain | Telomeric repeat binding factor (TRF) dimerisation domain
Resolution | 2.2

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | P | F | C | Q | H | R | Y | N | L | A | R | T | H | L | K | R | T | I | L | A | L | P | E | S | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | A | F | R | G | S | R | Y | G | D | F | R | . | Q | I | R | D | I | M | Q | A | L | L | V | R | P
Template Known Secondary structure |  |  |  |  |  | T | T |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 66 | . | . | . | 70 | . | . | . | . | . | . | . |  | . | . | 80 | . | . | . | . | . | . | . | . | . | 90

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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