Phyre 2 alignment of P27375 with c2vycA_

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Job Description | P27375
Confidence | 2.39% | Date | Thu Jan 5 11:43:57 GMT 2012
Rank | 71 | Aligned Residues | 27
% Identity | 26% | Template | c2vycA_
PDB info | PDB header:lyase | Chain: A: PDB Molecule:biodegradative arginine decarboxylase; | PDBTitle: crystal structure of acid induced arginine decarboxylase2 from e. coli
Resolution | 2.4 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |  |  |  |  |  | 100 | . | . | . | . | . | . | . |  | . | . | 110 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Query Sequence |  | H | R | Y | N | L | A | R | T | H | L | K | R | T | I | L | A | L | . | . | . | . | . | P | E | S | N | V | I | H | A | . | G | Y | G | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | R | Y | R | . | Q | Q | L | . | L | P | P | L | F | S | A | L | M | K | Y | S | D | I | H | E | Y | S | W | A | A | P | G | H | Q | G
Template Known Secondary structure |  |  |  |  |  | . |  | T | S | . | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  | S | S | S | S | S | T | T | T | T
Template Predicted Secondary structure |  |  |  |  |  | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 132 | . | . | . |  | . | . | . |  | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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