17/01/2012 01:45:39 : INFO  : Run start: Tue Jan 17 01:45:37 GMT 2012
17/01/2012 01:45:45 : INFO  : Initialised job
17/01/2012 01:45:46 : INFO  : Renaming log file 'phyre2_20120117_014537.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/1f515025f65cfa93/phyre_20120117_014537.log'
17/01/2012 01:45:48 : INFO  : Initialised job:
Sequence
>batch____
MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEH
QTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLD
GGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK

17/01/2012 01:45:49 : INFO  : Checked sequence
17/01/2012 01:45:53 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 01:45:54 : INFO  : PSI-BLAST 3 iterations
17/01/2012 01:46:51 : INFO  : PSI-BLAST 5 iterations
17/01/2012 01:47:28 : INFO  : Finished PSI-BLAST
17/01/2012 01:47:30 : INFO  : Running Buildali to generate a3m file
17/01/2012 01:49:48 : INFO  : Converting to HMM
17/01/2012 01:49:50 : INFO  : Calibrating HMM
17/01/2012 01:50:01 : INFO  : Searching HMM database
17/01/2012 01:54:09 : INFO  : Finished buildali
17/01/2012 01:54:11 : INFO  : Predicting secondary structure
17/01/2012 01:54:20 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 01:54:22 : INFO  : Predicting Disordered regions
17/01/2012 01:54:26 : INFO  : Predicted Disorder (Disopred)
17/01/2012 01:54:27 : INFO  : Running memsat_svm check
17/01/2012 01:59:57 : INFO  : Globular protein
17/01/2012 01:59:58 : INFO  : Predicted Transmembrane (memsat_svm) ID '1f515025f65cfa93'
17/01/2012 01:59:59 : INFO  : Initialising fold library search
17/01/2012 02:00:03 : INFO  : Initialised search input
17/01/2012 02:00:05 : INFO  : Building Ensemble models
17/01/2012 02:00:09 : INFO  : Building hh.d1kl9a1.model.1.pdb
17/01/2012 02:00:25 : INFO  : Building d1kl9a1.1.pdb
17/01/2012 02:00:40 : INFO  : Building d1q46a1.2.pdb
17/01/2012 02:00:55 : INFO  : Building c2vtyA_.3.pdb
17/01/2012 02:01:10 : INFO  : Building d1u84a_.4.pdb
17/01/2012 02:01:25 : INFO  : Building d1fcda3.5.pdb
17/01/2012 02:01:39 : INFO  : Building c3doaA_.6.pdb
17/01/2012 02:01:53 : INFO  : Building c2q8aA_.7.pdb
17/01/2012 02:02:09 : INFO  : Building d1sqwa1.8.pdb
17/01/2012 02:02:24 : INFO  : Building d1cz5a1.9.pdb
17/01/2012 02:02:40 : INFO  : Building d1mv8a1.10.pdb
17/01/2012 02:02:54 : INFO  : Building d1dzfa2.11.pdb
17/01/2012 02:03:09 : INFO  : Building d1tp6a_.12.pdb
17/01/2012 02:03:25 : INFO  : Building d1z67a1.13.pdb
17/01/2012 02:03:38 : INFO  : Building d1q25a2.14.pdb
17/01/2012 02:03:52 : INFO  : Building d1jkza_.15.pdb
17/01/2012 02:04:06 : INFO  : Building d1dlja1.16.pdb
17/01/2012 02:04:22 : INFO  : Building c2la2A_.17.pdb
17/01/2012 02:04:37 : INFO  : Building d1eika_.18.pdb
17/01/2012 02:04:52 : INFO  : Building c1y1yE_.19.pdb
17/01/2012 02:05:09 : INFO  : Building c2kzvA_.20.pdb
17/01/2012 02:05:39 : INFO  : Finished HH model building
17/01/2012 02:05:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 02:07:35 : INFO  : html domain output complete ID '1f515025f65cfa93'
17/01/2012 02:11:36 : INFO  : Run end  : Tue Jan 17 02:11:35 GMT 2012
