Phyre 2 alignment of P27375 with c2y8rD_

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Job Description | P27375
Confidence | 3.58% | Date | Thu Jan 5 11:43:57 GMT 2012
Rank | 27 | Aligned Residues | 34
% Identity | 18% | Template | c2y8rD_
PDB info | PDB header:membrane protein | Chain: D: PDB Molecule:apical membrane antigen, putative; | PDBTitle: crystal structure of apo ama1 mutant (tyr230ala) from2 toxoplasma gondii
Resolution | 2.45 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 130 | . | . | . | . | . | . | . | . | . |  | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | 160 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | F | R | A | F | R | E | K | K | K | . | L | R | L | H | V | T | S | A | Y | P | I | S | E | . | . | . | . | . | . | K | Q | K | G | K | S | V | K | F | F | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | F | K | P | R | K | S | V | T | E | N | H | H | L | I | Y | G | S | A | Y | V | G | E | N | P | D | A | F | I | S | K | C | P | N | Q | A | L | R | G | Y | R
Template Known Secondary structure |  |  |  |  |  |  |  |  | S | S | S |  | T | T |  |  |  |  |  | G | G | G | G | T | S | T | T | T |  |  |  |  | S |  |  | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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